MC09g_new0088 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g_new0088
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Location	MC09: 3451049 .. 3457518 (+)
RNA-Seq Expression	MC09g_new0088
Synteny	MC09g_new0088

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATATTAAAAATTAAATTAATAAACAAGTATTTTATACCTTTTAGATAGTTAAAAATCTCTATTATTGGAATTTATATTTATGATATTTTATGTTAACATTATATATTATTATATGTCAAATTACAATCAAAGGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCGTGGGTTCAAATCCCACTTCTGACATTTTTAAATATAGTTTATTAATTGTTTGAAATATATTTTAAAATAAAAAATAGTCAATTCCGGTCCGTGTCTCAATTGCAATTTCGAGAAGTTGAAGGGGTCAATGCAAATATTTGAGAATGTAGGAGGACCCGCGCGAAAGTCGTAGACTGCTTGCTGTCTTCAAGTTCGTTATCATCTCATCCAAACGACCGGCGACTGAACTTCAACTGAGAACTCTTAGAGCTTAGCCATGGCGATCATGGCGTTTCTCTCCTCACCACTGCACAGTCCCTCTCTAATCCGAAACAAATTTCTCCTCTCTCCACTTTCTTCTTCTTCCTTCAGTGCTCTACGGCGTTGTACTCCATCCAGTTTATCTGCCGCTCAAACTTTCGCGAGTTCGAGATTTTGCTTTAGGATACACTGCACTGATAAAGAACGAGCTGCACCGGTTACTCAGCGTTCCGATCCTAAGGCTGGAGTCCCGGTTTATAAGCCTAAAACCTACGAGGTTCTAGTCTCCGATGCCGCGAATTCGCTTGCCTATGCTCTGGAAGATGGAAAGATCCGCGTGGAGATTGATTTTCCGTAATATCTCGCTTTCTATATGAATATTGATGGTTTCTTTAAATTCTTGCATTGTGGCGTTTGGTTGGGATGGAGCTGAGAGGAAAATATTGTGGGATTTGAAGTGACAAAATTATTGATTTTCAGCACTATCTTGCTCTTTCTTGTGAGAGATACTACTCATTCCGACAATCTTTTACTTAGCATTAGGGTTAATACTACCATGCAGTACGTTTGTCTTCGTTTCTTTCAATCCCCCCGCCCCGAGTATTGCTAATCGGTGCATTTGGTAAAGTAATCTGGTGGATTCTATTTTGGGGTTTTCTTTTCGCAGAGAAATTGAATGTGGTAATTAAGATTCTTAGCGTAGTCTGTATAAGTGAATTGGTTTTTAATGTCTTTGAAGCTTACAAGAAAGTAACAATATCCTTCGCTCTAGCGTCGAAACGTAGTTTATTCTGGAATGTAAGGTTCAAATTTCTGTGTGTAAATTTTAGTTTGAGAATTTATTAGTCATTTGAGTGGATTTTTCATTATTTTCTAACCCTTGTTTTATTATTTCGTTTTTTTTTTGTCTGGTGGGGTTTCCTACATTCATCAGTCCCCTGCCTAGCAACATTTCCTCGTATAAGGTATCTTTCTCCTACATGTTTTTAATGAAATTCGTTGCTCATAACGTTATCTTTTCTTTCTTTCATTTATGAAAATATTCTCCATCTAGGCATTTTTTGCTTACATATATAAACGACCTCAACGTGTTGCAGATTATCATTTGAATCATGTAGTTTAGATTTTTGCATATTATGTATTGTTGATACCGCATTCTTTTTTGTGTTGAGGATATTTATACGTACGTAAAGGGATCCTTAGATGATTTCATTGATGCAAATAATCAGCTTGCAACGAACCTCAAAGAAAAGAAGGGAAACCAGATCTGATTGCATATTTACTTATTTAGTAGCTAATCGTGAATTTAACAACCTAGCAGCTCATACTGTCTGTTGTTGTTGACCTGAATTCATGAACTCAGTCAACATAGGGCCATTTTATAATGTGTCCAAAGAATTTATGTTTGCATATTTCTCGTGTGAGCAAGTTGTGAACATAAAATATAATATTCCTTGCTGCGAAAACAGCTGAAATGAATTTTGGGAGTAAAAGGTTACCATTAAATGAAATTCTCACCTGAGATTTGACAGTTGATGTGTTGGTGGTTACATTCCAAGCCATGTTAGTTTAGGTTCTTTTCTATATTCTGGATTGTTGATAGCACATGTTCATTTGATTTGAGGATATTTCTAAATATGTCAAGGGATCTTCAGATGAGTTCATCGATGCCAATATTCAACTTGCCCTGGCTGTTGCAAGGAATCTTCAAGAAAATAGAGGAACTAGATCTTGCATTGTAAGCAATTATATAAATTTGTATTACCAGCAAACCTCTTCTCAAGTATGTGCAGCCGTTAAAATCTCGTGTGATGACATTAGGTGTTTCCAGATAAGCCAGAGAAGCGTAGAGCTTCACAGCTATTCAAAACAGCTCTTGACTCGGTAACAAGTTAACTATTATAAACTTGTATTTATTTTTTGTCTAATGCAGATCACAACTGCTTGACTTTTTTTGGTAAGAAGCAAAACATTTCGTTAACAATAGAAGAGTACCAAAAGTGAGGGAAGATGAAAACCAAGTGAAGATATTATAATTTATAGCGATGGTTGGCAATTATGAAGTAGGAGAAATAATTATGGAGGTCTGGAGGATTTGGAAATAGCACTCCAAGAAGAGGGACATCACAAGATCTGCAAAAAAACCTATCTACTCCATCAAAAATTCTTCTATTTGTCTCAAGTCAAACCTTCCAAAAGACAGTGAAAAAAGCATCCATCCCAAAGCCACAACTGCTTCATTTAAGGGCTTTTTTATTTGTTCACACCATTATGGGGCCCTTTATTAGTTTGTGGCTTCGGCCATAAAGAAAAGGCAAAAGTCTAATGTTTCAGCTTAGATATTACGAGAAACATTTAGTGAATAAAGGCGAGCAGTGTTGAATACTATCAGAGGTACTTAGATCAGGTCATGAATTCAAAATTGATGCCACTTACTTTGGATGTTCTAGCTACCAAATATTTTATAGATCGGTAGTGTATTTTAGATATAAATAAATAAATTTGTGATATCTGATGATGCACCATTATTACTGGTAATAAATGATGTGGTTAATCAATAGCATGCTTATCCAGACAATTTAGATCTTGGTCTCCATTTTATGTGCTCATTTGATATTATTTTTCCCTTCTGATCGTTCAGATTGATGGAATAACTGTAAGTTCCCTGGATGATGTGCCTGCTGGACCTGTCACATCCTTCTTTAGATCTGTTAGAAACACCCTTGATTTTGATTTTGAAGATGAGAATGCAGGTTGGTTATATACACATGGGTCTAACAGATCCCTTGATTTTGATCTGTTAGAAACATTCTTGTCTTCTCTCTCTTTTTTATTTTTTATTTTTTATTTTGTGCGTGTCATGGCCGTATATTTCGCTACTAAATGCATTGTGCAAATATATGACATATCTTAATGACCTGAACCATTACGGCAAGACTGCAATTTATATTCATAGACAGTAATAAACTTGATGCAGAAAAGTGAAATGACAGGAAAAAGAAGAAAGAGTCAAAGGGAAAGAAAAGAAGGACTGACTAGAAAAGAAAAGAGTGATTAACTTGATTTAATCATTATATGAGGAAACTGTTTAGAAACTTAAAGGACCTGCCTCTTCCTATGTATTCCACTTCACTTTTGTGGATATAAACTTGTTTTTTCTTCTTCAATCATATGTTTTTTTCCTTCAGTCCTATGTTATATGTTATATTGTTATCTTTTATTTCATTACCTGCTTCTTTCTAAGATTACCATTATCATTTAATGATTTCTCACTCTTTACAATCCATCTGAATCACAGGTCGTTGGACATCTACTGACCCTCCATCACTGTACATATTTATTAATTGTAGCACGCGTGAACTTGCTTTGATAGAGAAGTATGTGGTATGATGTCTATGATAATTGCAAGATAGCAACTTTTGAACCCGTTGCCTACCTTGATTTAGCTTCTGACTAAAAGTTACATCTTTTTCTTCTCAAAATGGTTATAATGTTCTCATTTCAGTTTGTCTTCTCGAGCACAAATTATTAAAAAATTAAAAAAAAATCTGAAAATTTATTCCTCCTACTGATTATGATTCAGCTATCTACTGAATACTGATATTGTGGAGGACAGAACTGTTTGTGCCATCATGCCATTCTTCATGGTGGCATCGATGGTTATATAATACCTTTTGTCTTTCTTTCTGAGCAACTTGCATATTGGGGTGTGGAAGTACTAATTAAGATCTATTCATGACTTTCTAAGTGGCATTTCCACACACAATACGTTATGTTTTAAAGTTAATTTCACGTGGCTTATTGCAATTGGTTTCTGTCTTTACACCATTAGGTGACTCATTTTGGGATGTGCAGGAAACTTTTGCTTCGTCAACACCCACCCTGCTTTTTAATCTAGAACTTGAAACCTTGCGGTAATGGTCCTCCTTCTCATCCATTATTGATAGATATTGGGTTCATATTTGCAACTACTGATCAGAAGTTTCAAAATTCACAGTGCAGACTTGGGCTTACTGGGATTCCCTCCCAAAGATTTGCACCATCGATTTCTCTCTCAGTTCATCCCAGTGTTCTATATTCGAATCAGAGAGTACTCTAAGGTTTTGGATCTCATCTTGGTATCCTTGTTTAATTATATTCTTATATTTGTTGACTAAATTCTCTACTCTTTGTTCTCTTTGGGGGGAGGGGTACCAAGACAGTAGCAATAGCACCTTATATTGTTAATTACAGTGGAGCACTGTTTCGTCTATACCCTGGTGTGTATACTATTTTATCGAACTGCCTGTTAGAGAATTTTGTTCTTTGGTTTTCTCGATGTCTTTATCGGTCCTAAATCAGTTCACTGCACACTTAAGTTTTAGTAGCTAATCTTTTCCACTCTGGATTTTCACATAAAAATCTGTTCTCATGGATATGGATTATGGAACATGTGATCTTTATATCTCTATATCTTTTCATCCTTCATAATAGGGCCTTGGCAAGTGATGCTAAAACAAGCAGATAATTCTTATGCTTGCATTGCAGAGAGTGAGACAAGGTTCACCCTTGGTGAAGTATGTATAGAAACAGCAGTACTTTTAGTTTTAGCTATTAACCATTTGTCTGATGTTTTTGGACTAACTGTTGCTTGTTATTTAGACAAAAGATGAGCTATTAAGGGTCCTTGGACTACAGGAGGAACAAGGAAGCTCATTAGAATTTCTCCGCAGAGGCTACAAGGTTTCCTTTCGATATTTGTCTTATACCTATATGGTGTTAACTTATTGCTAATGTTAATCTTCATGCACATTTGATGCCCATTTTGTTTTTTTATTTATGTTTTTGAAAATTAAGCTTATAAATACTACTATCACCTCCGAGTTTCTTTGGTTCGTTATCTACCATTTTTTAATATTTTTGTAATCTAAGCCAAAGTTTGAAAAGTAACAAAAATAGCTTTTAAAAACGTTTTGAAATTTGGCTTAGAACTCAAATGTGTTTAAGTTGTGAGGAAGCAAACATAACTTTTAAAAACAGAAAACTAAGAACGAAATTATTATCAAACCAATGGAGCTAACCTACCAGCAGTTTAAGGAGAAATCTGCACATCCTATTTTGCTGTCTATGTTTTTTATTCAGTTATATGTGCATTCTTTTAGTAAAATAATCCTTAAACTGTGGCAGGCTTTGTTGGAGATAGTTTTGTAACTCATGATATCTCCTTTTGCAGGCTGCCACTTGGTGGGAAGAAGATGTTGACTCTGAACTATCTTCGGCATGGCGTAGTTGAGCAGCTCGAGGGTGGATTTATCTTTCATAAAACACTTACATCTTCATCGGGAAACACGCGTCGATGACCCTGAACATGAGATATCAATCACGTTTCCTTGTTCTATCAGATGGCCTCTTTCTAAGACTCTCATGGCTTTCTCTTGAACAGTCACTGCAGGGAAACTTCTATCTTAAAACTACATCTCTATTCAATCCACCTGCTTCAGAAGACTGACACAAACTTGAATTCAAGTCATCCTCCCCTGGAATTCAAGGTAAAATAATCTTGTACATTTTCTTAGTCGTAATGAATTTCGTTGTGTTATTCGTCATCGAGACGGGTTTGATTTTCCTTCACCATATTATGCTTGAAAAGTACAAATCAGGCCTTTTGGAGGGTTTGATCTTAGTCAAAGAACCACGTTATTCAACTGAATGAAATGATAATATATACAATCATTTAACTTTTTTTTTTGGATTTGAACCTCTCGTTTTTAAGAAGATAAAGTAATAGTTATGCTGATGTCTTCTAAACTAATTGTTCCAGGCTAATTTTTGTTTATGAATTTTACATTCAATCACTAATTAACTTCTATCTATGATTAATTTACTGGTATCAATCATAGATTTACTGCTCTACACATTGATTAACTATTTTTTATATTTAAAAAGTAAAAATATAACTAAATACATGATATCATCTGTTAATCTGTTATTATTCGCTAATGTAGTCTTATTTATCTACGACATCAACTAGATTATGATATATCATTAATCAACT

mRNA sequence

ATGGCGATCATGGCGTTTCTCTCCTCACCACTGCACAGTCCCTCTCTAATCCGAAACAAATTTCTCCTCTCTCCACTTTCTTCTTCTTCCTTCAGTGCTCTACGGCGTTGTACTCCATCCAGTTTATCTGCCGCTCAAACTTTCGCGAGTTCGAGATTTTGCTTTAGGATACACTGCACTGATAAAGAACGAGCTGCACCGGTTACTCAGCGTTCCGATCCTAAGGCTGGAGTCCCGGTTTATAAGCCTAAAACCTACGAGGTTCTAGTCTCCGATGCCGCGAATTCGCTTGCCTATGCTCTGGAAGATGGAAAGATCCGCGTGGAGATTGATTTTCCTCCCCTGCCTAGCAACATTTCCTCGTATAAGGGATCTTCAGATGAGTTCATCGATGCCAATATTCAACTTGCCCTGGCTGTTGCAAGGAATCTTCAAGAAAATAGAGGAACTAGATCTTGCATTGTGTTTCCAGATAAGCCAGAGAAGCGTAGAGCTTCACAGCTATTCAAAACAGCTCTTGACTCGATTGATGGAATAACTGTAAGTTCCCTGGATGATGTGCCTGCTGGACCTGTCACATCCTTCTTTAGATCTGTTAGAAACACCCTTGATTTTGATTTTGAAGATGAGAATGCAGGTCGTTGGACATCTACTGACCCTCCATCACTGTACATATTTATTAATTGTAGCACGCGTGAACTTGCTTTGATAGAGAAGTATGTGGAAACTTTTGCTTCGTCAACACCCACCCTGCTTTTTAATCTAGAACTTGAAACCTTGCGTGCAGACTTGGGCTTACTGGGATTCCCTCCCAAAGATTTGCACCATCGATTTCTCTCTCAGTTCATCCCAGTGTTCTATATTCGAATCAGAGAGTACTCTAAGACAGTAGCAATAGCACCTTATATTGTTAATTACAGTGGAGCACTGTTTCGTCTATACCCTGGGCCTTGGCAAGTGATGCTAAAACAAGCAGATAATTCTTATGCTTGCATTGCAGAGAGTGAGACAAGGTTCACCCTTGGTGAAACAAAAGATGAGCTATTAAGGGTCCTTGGACTACAGGAGGAACAAGGAAGCTCATTAGAATTTCTCCGCAGAGGCTACAAGGCTGCCACTTGGTGGGAAGAAGATGTTGACTCTGAACTATCTTCGGCATGGCGTAGTTGA

Coding sequence (CDS)

ATGGCGATCATGGCGTTTCTCTCCTCACCACTGCACAGTCCCTCTCTAATCCGAAACAAATTTCTCCTCTCTCCACTTTCTTCTTCTTCCTTCAGTGCTCTACGGCGTTGTACTCCATCCAGTTTATCTGCCGCTCAAACTTTCGCGAGTTCGAGATTTTGCTTTAGGATACACTGCACTGATAAAGAACGAGCTGCACCGGTTACTCAGCGTTCCGATCCTAAGGCTGGAGTCCCGGTTTATAAGCCTAAAACCTACGAGGTTCTAGTCTCCGATGCCGCGAATTCGCTTGCCTATGCTCTGGAAGATGGAAAGATCCGCGTGGAGATTGATTTTCCTCCCCTGCCTAGCAACATTTCCTCGTATAAGGGATCTTCAGATGAGTTCATCGATGCCAATATTCAACTTGCCCTGGCTGTTGCAAGGAATCTTCAAGAAAATAGAGGAACTAGATCTTGCATTGTGTTTCCAGATAAGCCAGAGAAGCGTAGAGCTTCACAGCTATTCAAAACAGCTCTTGACTCGATTGATGGAATAACTGTAAGTTCCCTGGATGATGTGCCTGCTGGACCTGTCACATCCTTCTTTAGATCTGTTAGAAACACCCTTGATTTTGATTTTGAAGATGAGAATGCAGGTCGTTGGACATCTACTGACCCTCCATCACTGTACATATTTATTAATTGTAGCACGCGTGAACTTGCTTTGATAGAGAAGTATGTGGAAACTTTTGCTTCGTCAACACCCACCCTGCTTTTTAATCTAGAACTTGAAACCTTGCGTGCAGACTTGGGCTTACTGGGATTCCCTCCCAAAGATTTGCACCATCGATTTCTCTCTCAGTTCATCCCAGTGTTCTATATTCGAATCAGAGAGTACTCTAAGACAGTAGCAATAGCACCTTATATTGTTAATTACAGTGGAGCACTGTTTCGTCTATACCCTGGGCCTTGGCAAGTGATGCTAAAACAAGCAGATAATTCTTATGCTTGCATTGCAGAGAGTGAGACAAGGTTCACCCTTGGTGAAACAAAAGATGAGCTATTAAGGGTCCTTGGACTACAGGAGGAACAAGGAAGCTCATTAGAATTTCTCCGCAGAGGCTACAAGGCTGCCACTTGGTGGGAAGAAGATGTTGACTCTGAACTATCTTCGGCATGGCGTAGTTGA

Protein sequence

MAIMAFLSSPLHSPSLIRNKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSELSSAWRS

Homology

[Close]

BLAST of MC09g_new0088 vs. ExPASy Swiss-Prot
Match: Q8H0W0 (Protein LPA3 OS=Arabidopsis thaliana OX=3702 GN=LPA3 PE=1 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 1.4e-148
Identity = 249/321 (77.57%), Postives = 287/321 (89.41%), Query Frame = 0


Query: 69  TQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPSNISSYKGSSDE 128
           +  SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K R+EIDFPPLPS+ISSYKGSSD+
Sbjct: 38  SSNSDPRRGVPLYKPKSYEVLATDAANSLAFALQDSKSRLEIDFPPLPSSISSYKGSSDD 97

Query: 129 FIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVP 188
           FIDANIQLA+ V R LQE   TR+CIVFPDKPEKRRASQ FK A DS+DGI++ SLDD+P
Sbjct: 98  FIDANIQLAVTVVRKLQEKIETRACIVFPDKPEKRRASQRFKAAFDSVDGISIGSLDDIP 157

Query: 189 AGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASST 248
              VT+FFRS+R+TLDFDFEDEN G W   +PP+LYIFINCSTREL+ IEK+VETFASST
Sbjct: 158 GTSVTNFFRSIRSTLDFDFEDENEGTWEPKEPPTLYIFINCSTRELSFIEKFVETFASST 217

Query: 249 PTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSG 308
           P LLFNLEL+TLRADLGLLGFPPKDLH+RFLSQFIPVFYIR REYSKTVA+AP+++NY+G
Sbjct: 218 PALLFNLELDTLRADLGLLGFPPKDLHYRFLSQFIPVFYIRTREYSKTVAVAPFVLNYNG 277

Query: 309 ALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG 368
           ALFR YPGPWQVMLKQ D S+AC+AES TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRG
Sbjct: 278 ALFRQYPGPWQVMLKQTDGSFACVAESPTRFTLGETKEELLQVLGLQEEKGSSLEFLRRG 337

Query: 369 YKAATWWEEDVDSELSSAWRS 390
           YK+ATWWEEDV+ E SS WR+
Sbjct: 338 YKSATWWEEDVELEASSNWRN 358

[Close]

BLAST of MC09g_new0088 vs. NCBI nr
Match: XP_022149990.1 (protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 764 bits (1973), Expect = 2.58e-278
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MAIMAFLSSPLHSPSLIRNKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCT 60
           MAIMAFLSSPLHSPSLIRNKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCT
Sbjct: 1   MAIMAFLSSPLHSPSLIRNKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCT 60

Query: 61  DKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPSNIS 120
           DKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPSNIS
Sbjct: 61  DKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPSNIS 120

Query: 121 SYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGIT 180
           SYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGIT
Sbjct: 121 SYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGIT 180

Query: 181 VSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKY 240
           VSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKY
Sbjct: 181 VSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKY 240

Query: 241 VETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIA 300
           VETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIA
Sbjct: 241 VETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIA 300

Query: 301 PYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGS 360
           PYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGS
Sbjct: 301 PYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGS 360

Query: 361 SLEFLRRGYKAATWWEEDVDSELSSAWRS 389
           SLEFLRRGYKAATWWEEDVDSELSSAWRS
Sbjct: 361 SLEFLRRGYKAATWWEEDVDSELSSAWRS 389

[Close]

BLAST of MC09g_new0088 vs. NCBI nr
Match: KAG6575630.1 (Protein LOW PSII ACCUMULATION 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 691 bits (1784), Expect = 1.76e-249
Identity = 352/392 (89.80%), Postives = 371/392 (94.64%), Query Frame = 0


Query: 1   MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRI 60
           MAIMAFLSSP H PSL+R   + FL SP+SSS FSALRR T SSL  AQT A+S FCFRI
Sbjct: 1   MAIMAFLSSPPHIPSLVRPCHSNFLFSPISSS-FSALRRSTRSSLFGAQTLATSGFCFRI 60

Query: 61  HCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPS 120
           HC+DKERAAPVT+ SDPKAGVP+YKPKTYEVLVSDAANSLAYALEDGK+R+EIDFPPLPS
Sbjct: 61  HCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPS 120

Query: 121 NISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSID 180
           NISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKP+K RASQLFKTALDSID
Sbjct: 121 NISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSID 180

Query: 181 GITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALI 240
           GIT+SSLDDVPAGPVTSFFRS+RNTLDFDFEDENAGRWTS++PPSLYIFINCSTRELA+I
Sbjct: 181 GITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMI 240

Query: 241 EKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV 300
           EKYVETFASS PTL+FNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Sbjct: 241 EKYVETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 300

Query: 301 AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEE 360
            IAPYIVNYSGALFR YPGPWQVMLKQADNSYAC+AESETRFTLGETKDELLRVLGLQEE
Sbjct: 301 PIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEE 360

Query: 361 QGSSLEFLRRGYKAATWWEEDVDSELSSAWRS 389
           QGSSLEFLRRGYKAATWWEED DSE+SSAWRS
Sbjct: 361 QGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS 391

[Close]

BLAST of MC09g_new0088 vs. NCBI nr
Match: XP_038900014.1 (protein LOW PSII ACCUMULATION 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 691 bits (1782), Expect = 3.55e-249
Identity = 354/392 (90.31%), Postives = 368/392 (93.88%), Query Frame = 0


Query: 1   MAIMAFLSSPLHSPSLIRN---KFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRI 60
           MAIMAF+SSP   PSL R+    FL SP+SSS F ALRR T SSL  AQT A+S FCFRI
Sbjct: 1   MAIMAFVSSPPQIPSLSRSFHSNFLFSPISSS-FCALRRSTRSSLFGAQTLATSGFCFRI 60

Query: 61  HCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPS 120
           HC DKER +PVTQ SDPKAGVP+YKPKTYEVLVSDAANSLAYALEDGKIR+EIDFPPLPS
Sbjct: 61  HCRDKERTSPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKIRLEIDFPPLPS 120

Query: 121 NISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSID 180
           NISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKPEKRRASQLFKTALDSID
Sbjct: 121 NISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASQLFKTALDSID 180

Query: 181 GITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALI 240
           GITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDEN+GRWTS+DPPSLYIFINCSTREL LI
Sbjct: 181 GITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENSGRWTSSDPPSLYIFINCSTRELGLI 240

Query: 241 EKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV 300
           EKYVETFASS PTLLFNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Sbjct: 241 EKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 300

Query: 301 AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEE 360
           A+APYIVNYSGALFR YPGPWQVMLKQ+DNSYAC+AESETRFTLGETKDELLRVLGLQEE
Sbjct: 301 AVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEE 360

Query: 361 QGSSLEFLRRGYKAATWWEEDVDSELSSAWRS 389
           QGSSLEFLRRGYKAATWWEEDVDSE+SSAWRS
Sbjct: 361 QGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 391

[Close]

BLAST of MC09g_new0088 vs. NCBI nr
Match: XP_022954402.1 (protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita moschata])

HSP 1 Score: 690 bits (1781), Expect = 5.04e-249
Identity = 351/392 (89.54%), Postives = 371/392 (94.64%), Query Frame = 0


Query: 1   MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRI 60
           MAIMAFLSSP H PSL+R   + FL SP++SS FSALRR T SSL  AQT A+S FCFRI
Sbjct: 1   MAIMAFLSSPPHIPSLVRPFHSNFLFSPIASS-FSALRRSTRSSLFGAQTLATSGFCFRI 60

Query: 61  HCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPS 120
           HC+DKERAAPVT+ SDPKAGVP+YKPKTYEVLVSDAANSLAYALEDGK+R+EIDFPPLPS
Sbjct: 61  HCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPS 120

Query: 121 NISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSID 180
           NISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKP+K RASQLFKTALDSID
Sbjct: 121 NISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSID 180

Query: 181 GITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALI 240
           GIT+SSLDDVPAGPVTSFFRS+RNTLDFDFEDENAGRWTS++PPSLYIFINCSTRELA+I
Sbjct: 181 GITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMI 240

Query: 241 EKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV 300
           EKYVETFASS PTL+FNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Sbjct: 241 EKYVETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 300

Query: 301 AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEE 360
            IAPYIVNYSGALFR YPGPWQVMLKQADNSYAC+AESETRFTLGETKDELLRVLGLQEE
Sbjct: 301 PIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEE 360

Query: 361 QGSSLEFLRRGYKAATWWEEDVDSELSSAWRS 389
           QGSSLEFLRRGYKAATWWEED DSE+SSAWRS
Sbjct: 361 QGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS 391

[Close]

BLAST of MC09g_new0088 vs. NCBI nr
Match: KAA0058708.1 (protein LOW PSII ACCUMULATION 3 [Cucumis melo var. makuwa] >TYK10514.1 protein LOW PSII ACCUMULATION 3 [Cucumis melo var. makuwa])

HSP 1 Score: 689 bits (1779), Expect = 9.10e-249
Identity = 352/392 (89.80%), Postives = 368/392 (93.88%), Query Frame = 0


Query: 1   MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRI 60
           M IMAFLSSP + PSL R   + FL SP+SSS    LRR TPSSL  AQT A+S FCFRI
Sbjct: 1   MPIMAFLSSPPYIPSLSRPFHSNFLFSPISSS----LRRSTPSSLFGAQTLAASGFCFRI 60

Query: 61  HCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPS 120
           HC DKERAAPVTQ SDPKAGVP+YKPKTYEVLVSDAANSLAYALEDGK+R+EIDFPPLPS
Sbjct: 61  HCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPS 120

Query: 121 NISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSID 180
           NISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKPEKRRAS+LFKTA+DSID
Sbjct: 121 NISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSID 180

Query: 181 GITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALI 240
           GITVSSLDDVPAGPVTSFFRSVRNTLDFDFED+NAGRWTS+DPPSLYIFINCSTREL LI
Sbjct: 181 GITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLI 240

Query: 241 EKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV 300
           EKYVETFASS PTLLFNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Sbjct: 241 EKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 300

Query: 301 AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEE 360
           A+APYIVNYSGALFR YPGPWQVMLKQ+DNSYAC+AESETRFTLGETKDELLRVLGLQEE
Sbjct: 301 AVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEE 360

Query: 361 QGSSLEFLRRGYKAATWWEEDVDSELSSAWRS 389
           QGSSLEFLRRGYKAATWWEEDVDSE+SSAWRS
Sbjct: 361 QGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 388

[Close]

BLAST of MC09g_new0088 vs. ExPASy TrEMBL
Match: A0A6J1D790 (protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018272 PE=4 SV=1)

HSP 1 Score: 764 bits (1973), Expect = 1.25e-278
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MAIMAFLSSPLHSPSLIRNKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCT 60
           MAIMAFLSSPLHSPSLIRNKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCT
Sbjct: 1   MAIMAFLSSPLHSPSLIRNKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRIHCT 60

Query: 61  DKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPSNIS 120
           DKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPSNIS
Sbjct: 61  DKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPSNIS 120

Query: 121 SYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGIT 180
           SYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGIT
Sbjct: 121 SYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGIT 180

Query: 181 VSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKY 240
           VSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKY
Sbjct: 181 VSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKY 240

Query: 241 VETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIA 300
           VETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIA
Sbjct: 241 VETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIA 300

Query: 301 PYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGS 360
           PYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGS
Sbjct: 301 PYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGS 360

Query: 361 SLEFLRRGYKAATWWEEDVDSELSSAWRS 389
           SLEFLRRGYKAATWWEEDVDSELSSAWRS
Sbjct: 361 SLEFLRRGYKAATWWEEDVDSELSSAWRS 389

[Close]

BLAST of MC09g_new0088 vs. ExPASy TrEMBL
Match: A0A6J1GQW6 (protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456648 PE=4 SV=1)

HSP 1 Score: 690 bits (1781), Expect = 2.44e-249
Identity = 351/392 (89.54%), Postives = 371/392 (94.64%), Query Frame = 0


Query: 1   MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRI 60
           MAIMAFLSSP H PSL+R   + FL SP++SS FSALRR T SSL  AQT A+S FCFRI
Sbjct: 1   MAIMAFLSSPPHIPSLVRPFHSNFLFSPIASS-FSALRRSTRSSLFGAQTLATSGFCFRI 60

Query: 61  HCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPS 120
           HC+DKERAAPVT+ SDPKAGVP+YKPKTYEVLVSDAANSLAYALEDGK+R+EIDFPPLPS
Sbjct: 61  HCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPS 120

Query: 121 NISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSID 180
           NISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKP+K RASQLFKTALDSID
Sbjct: 121 NISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSID 180

Query: 181 GITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALI 240
           GIT+SSLDDVPAGPVTSFFRS+RNTLDFDFEDENAGRWTS++PPSLYIFINCSTRELA+I
Sbjct: 181 GITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMI 240

Query: 241 EKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV 300
           EKYVETFASS PTL+FNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Sbjct: 241 EKYVETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 300

Query: 301 AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEE 360
            IAPYIVNYSGALFR YPGPWQVMLKQADNSYAC+AESETRFTLGETKDELLRVLGLQEE
Sbjct: 301 PIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEE 360

Query: 361 QGSSLEFLRRGYKAATWWEEDVDSELSSAWRS 389
           QGSSLEFLRRGYKAATWWEED DSE+SSAWRS
Sbjct: 361 QGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS 391

[Close]

BLAST of MC09g_new0088 vs. ExPASy TrEMBL
Match: A0A5A7UU42 (Protein LOW PSII ACCUMULATION 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001640 PE=4 SV=1)

HSP 1 Score: 689 bits (1779), Expect = 4.40e-249
Identity = 352/392 (89.80%), Postives = 368/392 (93.88%), Query Frame = 0


Query: 1   MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRI 60
           M IMAFLSSP + PSL R   + FL SP+SSS    LRR TPSSL  AQT A+S FCFRI
Sbjct: 1   MPIMAFLSSPPYIPSLSRPFHSNFLFSPISSS----LRRSTPSSLFGAQTLAASGFCFRI 60

Query: 61  HCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPS 120
           HC DKERAAPVTQ SDPKAGVP+YKPKTYEVLVSDAANSLAYALEDGK+R+EIDFPPLPS
Sbjct: 61  HCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPS 120

Query: 121 NISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSID 180
           NISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKPEKRRAS+LFKTA+DSID
Sbjct: 121 NISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSID 180

Query: 181 GITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALI 240
           GITVSSLDDVPAGPVTSFFRSVRNTLDFDFED+NAGRWTS+DPPSLYIFINCSTREL LI
Sbjct: 181 GITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLI 240

Query: 241 EKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV 300
           EKYVETFASS PTLLFNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Sbjct: 241 EKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 300

Query: 301 AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEE 360
           A+APYIVNYSGALFR YPGPWQVMLKQ+DNSYAC+AESETRFTLGETKDELLRVLGLQEE
Sbjct: 301 AVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEE 360

Query: 361 QGSSLEFLRRGYKAATWWEEDVDSELSSAWRS 389
           QGSSLEFLRRGYKAATWWEEDVDSE+SSAWRS
Sbjct: 361 QGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 388

[Close]

BLAST of MC09g_new0088 vs. ExPASy TrEMBL
Match: A0A6J1JTN7 (protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488800 PE=4 SV=1)

HSP 1 Score: 689 bits (1779), Expect = 4.93e-249
Identity = 350/392 (89.29%), Postives = 370/392 (94.39%), Query Frame = 0


Query: 1   MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRI 60
           MAIMAFLSSP H PSL+R   + FL SP+SSS FSALRR T SSL  AQT A+S FCFRI
Sbjct: 1   MAIMAFLSSPPHIPSLVRPFHSNFLFSPISSS-FSALRRSTRSSLFGAQTLATSGFCFRI 60

Query: 61  HCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPS 120
           HC+DKERAAPVT+ SDPKAGVP+YKPKTYEVLVSDAANSLAYALEDGK+R+EIDFPPLPS
Sbjct: 61  HCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPS 120

Query: 121 NISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSID 180
           NISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKP+K RASQLFKTALDSID
Sbjct: 121 NISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSID 180

Query: 181 GITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALI 240
           GIT+SSLDD+PAGPVTSFFRS+RNTLDFDFEDENAGRWTS++PPSLYIFINCSTRELA+I
Sbjct: 181 GITISSLDDIPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMI 240

Query: 241 EKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV 300
           EKYVETFASS PTL+FNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Sbjct: 241 EKYVETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 300

Query: 301 AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEE 360
            IAPYIVNYSGALFR YPGPWQVMLKQ DNSYAC+AESETRFTLGETKDELLRVLGLQEE
Sbjct: 301 PIAPYIVNYSGALFRQYPGPWQVMLKQTDNSYACVAESETRFTLGETKDELLRVLGLQEE 360

Query: 361 QGSSLEFLRRGYKAATWWEEDVDSELSSAWRS 389
           QGSSLEFLRRGYKAATWWEED DSE+SSAWRS
Sbjct: 361 QGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS 391

[Close]

BLAST of MC09g_new0088 vs. ExPASy TrEMBL
Match: A0A1S3CFB8 (protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499841 PE=4 SV=1)

HSP 1 Score: 689 bits (1777), Expect = 8.88e-249
Identity = 351/392 (89.54%), Postives = 368/392 (93.88%), Query Frame = 0


Query: 1   MAIMAFLSSPLHSPSLIR---NKFLLSPLSSSSFSALRRCTPSSLSAAQTFASSRFCFRI 60
           M IMAF+SSP + PSL R   + FL SP+SSS    LRR TPSSL  AQT A+S FCFRI
Sbjct: 1   MPIMAFISSPPYIPSLSRPFQSNFLFSPISSS----LRRSTPSSLFGAQTLAASGFCFRI 60

Query: 61  HCTDKERAAPVTQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPS 120
           HC DKERAAPVTQ SDPKAGVP+YKPKTYEVLVSDAANSLAYALEDGK+R+EIDFPPLPS
Sbjct: 61  HCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPS 120

Query: 121 NISSYKGSSDEFIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSID 180
           NISSYKGSSDEFIDANIQLALAVARNLQE RGTRSCIVFPDKPEKRRAS+LFKTA+DSID
Sbjct: 121 NISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSID 180

Query: 181 GITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALI 240
           GITVSSLDDVPAGPVTSFFRSVRNTLDFDFED+NAGRWTS+DPPSLYIFINCSTREL LI
Sbjct: 181 GITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLI 240

Query: 241 EKYVETFASSTPTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTV 300
           EKYVETFASS PTLLFNLELETLRADLGLLGFPPKDLH+RFLSQFIPVFYIRIREYSKTV
Sbjct: 241 EKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 300

Query: 301 AIAPYIVNYSGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEE 360
           A+APYIVNYSGALFR YPGPWQVMLKQ+DNSYAC+AESETRFTLGETKDELLRVLGLQEE
Sbjct: 301 AVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEE 360

Query: 361 QGSSLEFLRRGYKAATWWEEDVDSELSSAWRS 389
           QGSSLEFLRRGYKAATWWEEDVDSE+SSAWRS
Sbjct: 361 QGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 388

[Close]

BLAST of MC09g_new0088 vs. TAIR 10
Match: AT1G73060.1 (Low PSII Accumulation 3 )

HSP 1 Score: 527.3 bits (1357), Expect = 1.0e-149
Identity = 249/321 (77.57%), Postives = 287/321 (89.41%), Query Frame = 0


Query: 69  TQRSDPKAGVPVYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPSNISSYKGSSDE 128
           +  SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K R+EIDFPPLPS+ISSYKGSSD+
Sbjct: 38  SSNSDPRRGVPLYKPKSYEVLATDAANSLAFALQDSKSRLEIDFPPLPSSISSYKGSSDD 97

Query: 129 FIDANIQLALAVARNLQENRGTRSCIVFPDKPEKRRASQLFKTALDSIDGITVSSLDDVP 188
           FIDANIQLA+ V R LQE   TR+CIVFPDKPEKRRASQ FK A DS+DGI++ SLDD+P
Sbjct: 98  FIDANIQLAVTVVRKLQEKIETRACIVFPDKPEKRRASQRFKAAFDSVDGISIGSLDDIP 157

Query: 189 AGPVTSFFRSVRNTLDFDFEDENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASST 248
              VT+FFRS+R+TLDFDFEDEN G W   +PP+LYIFINCSTREL+ IEK+VETFASST
Sbjct: 158 GTSVTNFFRSIRSTLDFDFEDENEGTWEPKEPPTLYIFINCSTRELSFIEKFVETFASST 217

Query: 249 PTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSG 308
           P LLFNLEL+TLRADLGLLGFPPKDLH+RFLSQFIPVFYIR REYSKTVA+AP+++NY+G
Sbjct: 218 PALLFNLELDTLRADLGLLGFPPKDLHYRFLSQFIPVFYIRTREYSKTVAVAPFVLNYNG 277

Query: 309 ALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG 368
           ALFR YPGPWQVMLKQ D S+AC+AES TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRG
Sbjct: 278 ALFRQYPGPWQVMLKQTDGSFACVAESPTRFTLGETKEELLQVLGLQEEKGSSLEFLRRG 337

Query: 369 YKAATWWEEDVDSELSSAWRS 390
           YK+ATWWEEDV+ E SS WR+
Sbjct: 338 YKSATWWEEDVELEASSNWRN 358

[Close]

BLAST of MC09g_new0088 vs. TAIR 10
Match: AT5G48790.1 (Domain of unknown function (DUF1995) )

HSP 1 Score: 66.6 bits (161), Expect = 4.9e-11
Identity = 87/349 (24.93%), Postives = 146/349 (41.83%), Query Frame = 0


Query: 28  SSSFSALRRCTPSSLSAAQTFASSRFCFRIHCTD----------KERAAPVTQRSDPKAG 87
           S SFS     +P+SL+      S      +H  +          K RA  V+   +    
Sbjct: 2   SPSFSIATTVSPASLAGTLASNSKNVLCSLHSKNNDITKTNRNLKFRACSVSGGYNNNTS 61

Query: 88  VP-VYKPKTYEVLVSDAANSLAYALEDGKIRVEIDFPPLPSNISSYKGSSD---EFIDAN 147
           V  V  P+ Y  L++ A  ++  AL+D K  +EI+FP   S ++S  G  +   E  ++ 
Sbjct: 62  VDNVPFPRDYVELINQAKEAVEMALKDEKQLMEIEFP--TSGLASVPGDGEGATEMTESI 121

Query: 148 IQLALAVARNLQENRGTRSCIVFPDKPEKRRASQ-LFKTALDSIDGITVSSLDDVPAGPV 207
             +     R L   +   + I FP+  E + A + +F      +D +T  SL +      
Sbjct: 122 NMIREFCDRLLAPEKARSTRIFFPEANEVKFAQKTVFGGTYFKLDYLTKPSLFE------ 181

Query: 208 TSFFRSVRNTLDFDFED--ENAGRWTSTDPPSLYIFINCSTRELALIEKYVETFASST-- 267
                      DF F +  + A R    D   L  +   +  E+ ++E+  +    +T  
Sbjct: 182 -----------DFGFFERVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVVNTDR 241

Query: 268 PTLLFNLELETLRADLGLLGFPPKDLHHRFLSQFIPVFYIRIREYSKT----VAIAPYIV 327
             ++FN EL+ +R+     G+ PK             FY ++   +KT    +    YI 
Sbjct: 242 KLIIFNGELDRIRS-----GYYPK------------FFYPKLAALTKTLLPKMETVYYIH 301

Query: 328 NY----SGALFRLYPGPWQVMLKQADNSYACIAESETRFTLGETKDELL 350
           N+     G LFR YPGPWQV L++  N Y C+ + E+  +L E   ++L
Sbjct: 302 NFKGQKGGVLFRCYPGPWQV-LRRTRNKYICVHQQESMPSLKEVALDIL 313

The following BLAST results are available for this feature:

BLAST of MC09g_new0088 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H0W0	1.4e-148	77.57	Protein LPA3 OS=Arabidopsis thaliana OX=3702 GN=LPA3 PE=1 SV=1	[more]

BLAST of MC09g_new0088 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149990.1	2.58e-278	100.00	protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 [Momordica charantia]	[more]
KAG6575630.1	1.76e-249	89.80	Protein LOW PSII ACCUMULATION 3, chloroplastic, partial [Cucurbita argyrosperma ...	[more]
XP_038900014.1	3.55e-249	90.31	protein LOW PSII ACCUMULATION 3, chloroplastic [Benincasa hispida]	[more]
XP_022954402.1	5.04e-249	89.54	protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita moschata]	[more]
KAA0058708.1	9.10e-249	89.80	protein LOW PSII ACCUMULATION 3 [Cucumis melo var. makuwa] >TYK10514.1 protein L...	[more]

BLAST of MC09g_new0088 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D790	1.25e-278	100.00	protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 OS=Momordica charantia...	[more]
A0A6J1GQW6	2.44e-249	89.54	protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5A7UU42	4.40e-249	89.80	Protein LOW PSII ACCUMULATION 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1JTN7	4.93e-249	89.29	protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A1S3CFB8	8.88e-249	89.54	protein LOW PSII ACCUMULATION 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of MC09g_new0088 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73060.1	1.0e-149	77.57	Low PSII Accumulation 3	[more]
AT5G48790.1	4.9e-11	24.93	Domain of unknown function (DUF1995)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018962	Domain of unknown function DUF1995	PFAM	PF09353	DUF1995	coord: 83..345 e-value: 6.0E-50 score: 170.1
IPR044687	Protein LOW PSII ACCUMULATION 3	PANTHER	PTHR34051	PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC	coord: 41..389
None	No IPR available	PANTHER	PTHR34051:SF2	PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC	coord: 41..389

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g_new0088.1	MC09g_new0088.1	mRNA