MC09g_new0023 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g_new0023
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionmembrane protein of ER body 1-like
LocationMC09: 982470 .. 982790 (-)
RNA-Seq ExpressionMC09g_new0023
SyntenyMC09g_new0023
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACAGAAGGCGTTTCTCCTATCCACGCAGATCATGAGCTCATAACTTCCCAAGAAGAATTTCTGGGTATTCTAATAATTTACTGCCCACCATTGATTTACTCTAGTTTCCACCATTTTTTTTTTTTTACATTTTACTGCTTGTTTTTTACAGAAGGATTTCAAAAGTGGCTAGATCTAGATGCAGGGCGAAACAATAGGCTTTTGGGCGGCAGCCAGAAGAAGAATGTATCATTAACAGATCTGGAATCACGACTTTCTACTGGTAAACTACTTAGAGTCGGTTTGGCAACGTACTTTTCTATTTCGCAAAGGTGA

mRNA sequence

ATGGCAACAGAAGGCGTTTCTCCTATCCACGCAGATCATGAGCTCATAACTTCCCAAGAAGAATTTCTGGAAGGATTTCAAAAGTGGCTAGATCTAGATGCAGGGCGAAACAATAGGCTTTTGGGCGGCAGCCAGAAGAAGAATGTATCATTAACAGATCTGGAATCACGACTTTCTACTGGTAAACTACTTAGAGTCGGTTTGGCAACGTACTTTTCTATTTCGCAAAGGTGA

Coding sequence (CDS)

ATGGCAACAGAAGGCGTTTCTCCTATCCACGCAGATCATGAGCTCATAACTTCCCAAGAAGAATTTCTGGAAGGATTTCAAAAGTGGCTAGATCTAGATGCAGGGCGAAACAATAGGCTTTTGGGCGGCAGCCAGAAGAAGAATGTATCATTAACAGATCTGGAATCACGACTTTCTACTGGTAAACTACTTAGAGTCGGTTTGGCAACGTACTTTTCTATTTCGCAAAGGTGA

Protein sequence

MATEGVSPIHADHELITSQEEFLEGFQKWLDLDAGRNNRLLGGSQKKNVSLTDLESRLSTGKLLRVGLATYFSISQR
Homology
[Close]
BLAST of MC09g_new0023 vs. NCBI nr
Match: XP_022152078.1 (membrane protein of ER body 1-like [Momordica charantia])

HSP 1 Score: 122 bits (307), Expect = 3.63e-31
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MATEGVSPIHADHELITSQEEFLEGFQKWLDLDAGRNNRLLGGSQKKNVSLTDLESRLST 60
          MATEGVSPIHADHELITSQEEFLEGFQKWLDLDAGRNNRLLGGSQKKNVSLTDLESRLST
Sbjct: 1  MATEGVSPIHADHELITSQEEFLEGFQKWLDLDAGRNNRLLGGSQKKNVSLTDLESRLST 60

Query: 61 GK 62
           +
Sbjct: 61 AR 62

[Close]
BLAST of MC09g_new0023 vs. ExPASy TrEMBL
Match: A0A6J1DDW9 (membrane protein of ER body 1-like OS=Momordica charantia OX=3673 GN=LOC111019877 PE=3 SV=1)

HSP 1 Score: 122 bits (307), Expect = 1.76e-31
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MATEGVSPIHADHELITSQEEFLEGFQKWLDLDAGRNNRLLGGSQKKNVSLTDLESRLST 60
          MATEGVSPIHADHELITSQEEFLEGFQKWLDLDAGRNNRLLGGSQKKNVSLTDLESRLST
Sbjct: 1  MATEGVSPIHADHELITSQEEFLEGFQKWLDLDAGRNNRLLGGSQKKNVSLTDLESRLST 60

Query: 61 GK 62
           +
Sbjct: 61 AR 62

The following BLAST results are available for this feature:
BLAST of MC09g_new0023 vs.
Match NameE-valueIdentityDescription
BLAST of MC09g_new0023 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022152078.13.63e-3196.77membrane protein of ER body 1-like [Momordica charantia][more]
BLAST of MC09g_new0023 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DDW91.76e-3196.77membrane protein of ER body 1-like OS=Momordica charantia OX=3673 GN=LOC11101987... [more]
BLAST of MC09g_new0023 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g_new0023.1MC09g_new0023.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030026 cellular manganese ion homeostasis
biological_process GO:0071421 manganese ion transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005384 manganese ion transmembrane transporter activity