MC09g_new0009 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g_new0009
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDefensin-like protein 1
LocationMC09: 482603 .. 483917 (+)
RNA-Seq ExpressionMC09g_new0009
SyntenyMC09g_new0009
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TATATATGGAACATAATTCATGGAAAGAATCAAAGATTGCAACCTCACCATCGGATCCGGGAATCTTTTTTTAGAATCAATGTCATGTGGTTTATGACGTAGATTCTTATAATCAGAACTCGTTGTCTGGACTTGAACAACACAATGACCAGTATAGTACTTGAACCTAAAACCTCATCATAACTGATACCAAATTTAGGCAGATACTACTAAGGAGAGTTGCTCCATGGCTTATTTTCAATCACCAAAAGAGAGAGAAGCCATGGCATCTACAAACCATTCTTCATTCCTCCTATGCATCCTCTCTATTGCTTTCCTTCTGATTGCAGGTAATCCTCCTTTCCTCTCTCCCACGATAGTGGAAAATACTCGGCTTCACTTTCCTTCACATGCATATACATATATCGAGGGCATGCTCGATTTTGTAACGTTTTTATTTTTCATTTCGTATTTATTATCTCCGTGTCATTTGAGAAATAACAAAAGCAAGATCGTTTTTTCAATTCTCAAACAATAAAAGTGTATTCATCTGCCATTCTTTGTTGTTTTTAAAATTATTTTTCTTAAGTTTCATTTGGAAAAAATAAATATTCAAAGTCTTATGATATGACCATATCGAAAAAAAAAAGAAGAAGAAGAAATCAAAGCTTTGTATTTCCAAAACTTTTATTCTATTTTGATAATGTGTTGAAAAATTATAAACAAGATACTATATATCAAAGTCAAACATTACCTAACATATGGTGAAACTCCTATTTCCAATTTTTCCTTGTTTAAAATATTTATATCTGATGATACTATGAAAATATGCGACATCAATCCTTTAAACATATAGAAATGTTGATCGAAATGTGAAAATGTCCGAGTGAAATTGCAGGGCTAGGGCCAGGAGGTGCACTGAATGTACCAGTGGCGTGTTTGGGAACATGCTCAAGTTTTCCAAACTGCCATCAAAGTTGCATCTCTGCAGGTCATGTGAAGGGCGGCGCGTGTATGGGTGTCTCCTTCGACTCCTTTCTTGCTGCTGCAACATAACCTGATCTTCTTCTTTAATTTCAATTCCTCACACAGTGAACTGCTGATCATGTTTTGGATTTTATAATAATGTTGTTCAATGCCCATTTCTATGCCTTTGTGAATTGCCTGTTTGGAAAATCATATTACTACGTTTTCAAAATAATTTCGTGTACTAGCAAGGTATTAAATTTCAGCCAATATTTTTACTCTGTATATATGCGTGCGTTCGACATCGACGCAAATGAGACAACAAAATGTACATAATTTGATATTTTTATTGACATTTCCATAAATTGAG

mRNA sequence

ATGGCTTATTTTCAATCACCAAAAGAGAGAGAAGCCATGGCATCTACAAACCATTCTTCATTCCTCCTATGCATCCTCTCTATTGCTTTCCTTCTGATTGCAGGGCTAGGGCCAGGAGGTGCACTGAATGTACCAGTGGCGTGTTTGGGAACATGCTCAAGTTTTCCAAACTGCCATCAAAGTTGCATCTCTGCAGGTCATGTGAAGGGCGGCGCGTGTATGGGTGTCTCCTTCGACTCCTTTCTTGCTGCTGCAACATAA

Coding sequence (CDS)

ATGGCTTATTTTCAATCACCAAAAGAGAGAGAAGCCATGGCATCTACAAACCATTCTTCATTCCTCCTATGCATCCTCTCTATTGCTTTCCTTCTGATTGCAGGGCTAGGGCCAGGAGGTGCACTGAATGTACCAGTGGCGTGTTTGGGAACATGCTCAAGTTTTCCAAACTGCCATCAAAGTTGCATCTCTGCAGGTCATGTGAAGGGCGGCGCGTGTATGGGTGTCTCCTTCGACTCCTTTCTTGCTGCTGCAACATAA

Protein sequence

MAYFQSPKEREAMASTNHSSFLLCILSIAFLLIAGLGPGGALNVPVACLGTCSSFPNCHQSCISAGHVKGGACMGVSFDSFLAAAT
Homology
BLAST of MC09g_new0009 vs. NCBI nr
Match: KAG6575964.1 (hypothetical protein SDJN03_26603, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 74.3 bits (181), Expect = 3.07e-15
Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = 0

Query: 12 AMASTNHSSFLLCILSIAFLLIAGLG--PGGALNVPVACLGTCSSFPNCHQSCISAGHVK 71
          + A  +  SFLLC+   AF+LIAGLG  PG A+N+ V CLG CS  PNC  +CI+AGH K
Sbjct: 4  SFAMRSSFSFLLCM---AFVLIAGLGTRPGSAINLAVVCLGPCSKIPNCENACINAGHAK 63

Query: 72 GGACMGVSFD 79
          GG C+G   D
Sbjct: 64 GGECLGFFKD 70

BLAST of MC09g_new0009 vs. NCBI nr
Match: KAB1669065.1 (hypothetical protein ES319_1Z078900v1 [Gossypium barbadense] >KAG4192400.1 hypothetical protein ERO13_A07G154700v2 [Gossypium hirsutum] >TYI19655.1 hypothetical protein ES332_A07G179700v1 [Gossypium tomentosum])

HSP 1 Score: 61.6 bits (148), Expect = 3.07e-10
Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 0

Query: 22 LLCILSIAFLLIAGLGPGG--ALNVPVACLGTCSSFPNCHQSCISAGHVKGGACMGVSFD 81
          +LC++     LI  LGP G  A+NVP  CLG CS+ PNCHQSCI  G  KGG C+G SF+
Sbjct: 17 ILCLI-----LIWNLGPVGVDAINVP-PCLGPCSAIPNCHQSCIDKGFPKGGVCIGFSFE 76

Query: 82 SFLAAAT 86
                T
Sbjct: 77 DLACCCT 77

BLAST of MC09g_new0009 vs. NCBI nr
Match: KAB1669066.1 (hypothetical protein ES319_1Z078900v1 [Gossypium barbadense] >KAG4192399.1 hypothetical protein ERO13_A07G154700v2 [Gossypium hirsutum] >PPS10815.1 hypothetical protein GOBAR_AA09820 [Gossypium barbadense] >TYH10488.1 hypothetical protein ES288_A07G180500v1 [Gossypium darwinii] >TYI19656.1 hypothetical protein ES332_A07G179700v1 [Gossypium tomentosum])

HSP 1 Score: 60.1 bits (144), Expect = 1.30e-09
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 0

Query: 22 LLCILSIAFLLIAGLGPGGALNVPVACLGTCSSFPNCHQSCISAGHVKGGACMGVSFDSF 81
          +LC++ I + L+AG     A+NVP  CLG CS+ PNCHQSCI  G  KGG C+G SF+  
Sbjct: 17 ILCLILI-WNLVAGPVGVDAINVP-PCLGPCSAIPNCHQSCIDKGFPKGGVCIGFSFEDL 76

Query: 82 LAAAT 86
              T
Sbjct: 77 ACCCT 79

BLAST of MC09g_new0009 vs. NCBI nr
Match: CAB4291337.1 (unnamed protein product [Prunus armeniaca] >CAB4321655.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 60.1 bits (144), Expect = 1.30e-09
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 0

Query: 22 LLCILSIAFLLIAGLGPGGALNVPVACLGTCSSFPNCHQSCISAGHVKGGACMG 75
          L+  L IA LL +  GP GA+  PV CLG CS F +C+ +CI+  H KGGACMG
Sbjct: 13 LVGFLCIALLLASVAGPVGAIRAPVVCLGPCSEFKDCNGACIAKQHPKGGACMG 66

BLAST of MC09g_new0009 vs. NCBI nr
Match: KHG02242.1 (Defensin-like protein 1 [Gossypium arboreum])

HSP 1 Score: 59.7 bits (143), Expect = 1.85e-09
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 0

Query: 22 LLCILSIAFLLIAGLGPGGALNVPVACLGTCSSFPNCHQSCISAGHVKGGACMGVSFD 79
          +LC++ I + L+AG     A+NVP  CLG CS+ PNCHQSCI  G  KGG C+G SF+
Sbjct: 17 ILCLILI-WNLVAGPVGVDAINVP-PCLGPCSAIPNCHQSCIDKGFPKGGVCIGFSFE 72

BLAST of MC09g_new0009 vs. ExPASy TrEMBL
Match: A0A5D2PWN7 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A07G179700v1 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.49e-10
Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 0

Query: 22 LLCILSIAFLLIAGLGPGG--ALNVPVACLGTCSSFPNCHQSCISAGHVKGGACMGVSFD 81
          +LC++     LI  LGP G  A+NVP  CLG CS+ PNCHQSCI  G  KGG C+G SF+
Sbjct: 17 ILCLI-----LIWNLGPVGVDAINVP-PCLGPCSAIPNCHQSCIDKGFPKGGVCIGFSFE 76

Query: 82 SFLAAAT 86
                T
Sbjct: 77 DLACCCT 77

BLAST of MC09g_new0009 vs. ExPASy TrEMBL
Match: A0A5J5N825 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_1Z078900v1 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.49e-10
Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 0

Query: 22 LLCILSIAFLLIAGLGPGG--ALNVPVACLGTCSSFPNCHQSCISAGHVKGGACMGVSFD 81
          +LC++     LI  LGP G  A+NVP  CLG CS+ PNCHQSCI  G  KGG C+G SF+
Sbjct: 17 ILCLI-----LIWNLGPVGVDAINVP-PCLGPCSAIPNCHQSCIDKGFPKGGVCIGFSFE 76

Query: 82 SFLAAAT 86
                T
Sbjct: 77 DLACCCT 77

BLAST of MC09g_new0009 vs. ExPASy TrEMBL
Match: A0A6J5VUM4 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51612 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.30e-10
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 0

Query: 22 LLCILSIAFLLIAGLGPGGALNVPVACLGTCSSFPNCHQSCISAGHVKGGACMG 75
          L+  L IA LL +  GP GA+  PV CLG CS F +C+ +CI+  H KGGACMG
Sbjct: 13 LVGFLCIALLLASVAGPVGAIRAPVVCLGPCSEFKDCNGACIAKQHPKGGACMG 66

BLAST of MC09g_new0009 vs. ExPASy TrEMBL
Match: A0A2P5Y5D7 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_1Z078900v1 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.30e-10
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 0

Query: 22 LLCILSIAFLLIAGLGPGGALNVPVACLGTCSSFPNCHQSCISAGHVKGGACMGVSFDSF 81
          +LC++ I + L+AG     A+NVP  CLG CS+ PNCHQSCI  G  KGG C+G SF+  
Sbjct: 17 ILCLILI-WNLVAGPVGVDAINVP-PCLGPCSAIPNCHQSCIDKGFPKGGVCIGFSFEDL 76

Query: 82 LAAAT 86
              T
Sbjct: 77 ACCCT 79

BLAST of MC09g_new0009 vs. ExPASy TrEMBL
Match: A0A5D2PUB4 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A07G179700v1 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.30e-10
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 0

Query: 22 LLCILSIAFLLIAGLGPGGALNVPVACLGTCSSFPNCHQSCISAGHVKGGACMGVSFDSF 81
          +LC++ I + L+AG     A+NVP  CLG CS+ PNCHQSCI  G  KGG C+G SF+  
Sbjct: 17 ILCLILI-WNLVAGPVGVDAINVP-PCLGPCSAIPNCHQSCIDKGFPKGGVCIGFSFEDL 76

Query: 82 LAAAT 86
              T
Sbjct: 77 ACCCT 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6575964.13.07e-1554.29hypothetical protein SDJN03_26603, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAB1669065.13.07e-1050.75hypothetical protein ES319_1Z078900v1 [Gossypium barbadense] >KAG4192400.1 hypot... [more]
KAB1669066.11.30e-0949.23hypothetical protein ES319_1Z078900v1 [Gossypium barbadense] >KAG4192399.1 hypot... [more]
CAB4291337.11.30e-0953.70unnamed protein product [Prunus armeniaca] >CAB4321655.1 unnamed protein product... [more]
KHG02242.11.85e-0953.45Defensin-like protein 1 [Gossypium arboreum][more]
Match NameE-valueIdentityDescription
A0A5D2PWN71.49e-1050.75Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A07G179700v1 P... [more]
A0A5J5N8251.49e-1050.75Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_1Z078900v1 PE=4... [more]
A0A6J5VUM46.30e-1053.70Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51612 PE=4 S... [more]
A0A2P5Y5D76.30e-1049.23Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_1Z078900v1 PE=4... [more]
A0A5D2PUB46.30e-1049.23Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A07G179700v1 P... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036574Knottin, scorpion toxin-like superfamilyGENE3D3.30.30.10coord: 43..83
e-value: 2.1E-5
score: 26.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g_new0009.1MC09g_new0009.1mRNA