MC09g_new0006 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g_new0006
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	S-protein homolog
Location	MC09: 401503 .. 401892 (-)
RNA-Seq Expression	MC09g_new0006
Synteny	MC09g_new0006

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCTCTTGTGGGTGCATCAGGGTTACCGTTAGGAAGATGGAACGTTCACATTGTTAATAAGTTAAACAATGATGTCTTGGCTGTGCACTGCAAGTCGAAAGACAATGATTTGCGCTATCAACGCTTGGTTCCTGGAGCTGATTTCCATTGGAGCTTTCGAGTGAATGTGTGGGGAACAACCTTATTTTGGTGCAACTTACAAAAGTCAAGTGCCTATGCCTCGTTTGATACATTTTGGCCTGAGTCGAAGAATCAGTGGCTTCGTTATAGGTGCACCGATAGAACCAAGGGAAATTGCATTTGGACGGCCAAAGATGACGGAATTTACTTGAAAAACATTCCTGATAATGTTGAAGAGTTGGTTCATAAGTGGACCAGTTCCTAA

mRNA sequence

ATGGTGGCTCTTGTGGGTGCATCAGGGTTACCGTTAGGAAGATGGAACGTTCACATTGTTAATAAGTTAAACAATGATGTCTTGGCTGTGCACTGCAAGTCGAAAGACAATGATTTGCGCTATCAACGCTTGGTTCCTGGAGCTGATTTCCATTGGAGCTTTCGAGTGAATGTGTGGGGAACAACCTTATTTTGGTGCAACTTACAAAAGTCAAGTGCCTATGCCTCGTTTGATACATTTTGGCCTGAGTCGAAGAATCAGTGGCTTCGTTATAGGTGCACCGATAGAACCAAGGGAAATTGCATTTGGACGGCCAAAGATGACGGAATTTACTTGAAAAACATTCCTGATAATGTTGAAGAGTTGGTTCATAAGTGGACCAGTTCCTAA

Coding sequence (CDS)

ATGGTGGCTCTTGTGGGTGCATCAGGGTTACCGTTAGGAAGATGGAACGTTCACATTGTTAATAAGTTAAACAATGATGTCTTGGCTGTGCACTGCAAGTCGAAAGACAATGATTTGCGCTATCAACGCTTGGTTCCTGGAGCTGATTTCCATTGGAGCTTTCGAGTGAATGTGTGGGGAACAACCTTATTTTGGTGCAACTTACAAAAGTCAAGTGCCTATGCCTCGTTTGATACATTTTGGCCTGAGTCGAAGAATCAGTGGCTTCGTTATAGGTGCACCGATAGAACCAAGGGAAATTGCATTTGGACGGCCAAAGATGACGGAATTTACTTGAAAAACATTCCTGATAATGTTGAAGAGTTGGTTCATAAGTGGACCAGTTCCTAA

Protein sequence

MVALVGASGLPLGRWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWGTTLFWCNLQKSSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKNIPDNVEELVHKWTSS

Homology

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BLAST of MC09g_new0006 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.7e-16
Identity = 44/118 (37.29%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 12  LGRWNVHIVNKL-NNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWGTTLFWCNLQK 71
           +  W V + N L   + L +HCKSK+NDL    L     F W+F  N+  +TLFWC + K
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 72  SSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKNIPDNVEELVHKWTS 129
              + +   FW +     L +RC  +   NC+WTAK+DG+YL N     + L  KW S
Sbjct: 98  DDGHMNVKVFWDD---VILFHRCDWK---NCVWTAKNDGLYLWNSAIGEDVLSEKWKS 149

[Close]

BLAST of MC09g_new0006 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.8e-16
Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 0


Query: 12  LGRWNVHIVNKL-NNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWGTTLFWCNLQK 71
           +  W V +VN L   + L +HCKSK++DL    L     F W+F  N+  +T FWC + K
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 72  SSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKNIPDNVEELVHKW 127
            + + + + FW +     L +RC  +   NCIWTAK DG+YL N     + L  KW
Sbjct: 98  DNGHMNVNVFWDD---VILFHRCGWK---NCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of MC09g_new0006 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.5e-12
Identity = 37/92 (40.22%), Postives = 50/92 (54.35%), Query Frame = 0


Query: 20  VNKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWGTTLFWCNLQKSSAYASFDT 79
           +N  N ++L VHCKSK+ND+  + L  G    +SF+ N WGTT FWCNL K   Y  +  
Sbjct: 32  LNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRG 91

Query: 80  FWPESKNQWLRYRCTDRTKGNCIWTAKDDGIY 112
               +  Q +     D +  N  W A+DDGIY
Sbjct: 92  I---TAYQAIGLFAKDGSSYN--WLARDDGIY 118

[Close]

BLAST of MC09g_new0006 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.4e-09
Identity = 36/107 (33.64%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 6   GASGLPLGRWNVHIV---NKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWGTT 65
           G  GLP   W   +V   N +    L +HCKSK +DL    +    ++H+ F+ N+W +T
Sbjct: 18  GYGGLP-PFWRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKST 77

Query: 66  LFWCNLQKSSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDG 110
           LF+C+ Q  S + SFD  +   ++Q +   C D     C W  K DG
Sbjct: 78  LFFCSFQWDSQFKSFD-IYDAQRDQGI---CDD-----CQWEIKPDG 114

[Close]

BLAST of MC09g_new0006 vs. ExPASy Swiss-Prot
Match: Q40975 (Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.7e-09
Identity = 35/101 (34.65%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 17  VHIVNKLNND-VLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWGTTLFWCNLQKSSAYA 76
           V I+N+  N   + +HC+SKDNDL+ Q +  G D  +SFR + + TT F+C+LQ      
Sbjct: 26  VRIMNRRGNGRSIGIHCRSKDNDLQNQTVTSGHDMSFSFREDFFHTTHFYCDLQ------ 85

Query: 77  SFDTFW-PESKNQWLRYRC----TDRTKGNCIWTAKDDGIY 112
                W  E+K  +  Y+       R    C+W   DDG+Y
Sbjct: 86  -----WDKETKFGFYSYQAKRDDDGRCSSQCLWKIMDDGLY 115

[Close]

BLAST of MC09g_new0006 vs. NCBI nr
Match: XP_022143852.1 (S-protein homolog 74-like [Momordica charantia])

HSP 1 Score: 286 bits (731), Expect = 2.08e-97
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MVALVGASGLPLGRWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWG 60
           MVALVGASGLPLGRWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWG
Sbjct: 18  MVALVGASGLPLGRWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWG 77

Query: 61  TTLFWCNLQKSSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKNIPDNVE 120
           TTLFWCNLQKSSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKNIPDNVE
Sbjct: 78  TTLFWCNLQKSSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKNIPDNVE 137

Query: 121 ELVHKWTSS 129
           ELVHKWTSS
Sbjct: 138 ELVHKWTSS 146

[Close]

BLAST of MC09g_new0006 vs. NCBI nr
Match: XP_022143839.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 201 bits (512), Expect = 6.86e-64
Identity = 90/134 (67.16%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 3   ALVGASGLPLG--------RWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSF 62
           ALVGA   P G        RW+VH+VN LNN+ L VHCKSKD+DL YQRLV GADF WSF
Sbjct: 20  ALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLVRGADFQWSF 79

Query: 63  RVNVWGTTLFWCNLQKSSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKN 122
           +VN WGTTLFWCNL K  AY +F+ FWPES+N WLR RC + T+G+CIWTAKDDGIYL+N
Sbjct: 80  KVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIYLRN 139

Query: 123 IPDNVEELVHKWTS 128
           IP N EEL+HKW S
Sbjct: 140 IPTNSEELIHKWIS 153

[Close]

BLAST of MC09g_new0006 vs. NCBI nr
Match: XP_004139726.1 (S-protein homolog 74-like [Cucumis sativus])

HSP 1 Score: 170 bits (430), Expect = 1.56e-51
Identity = 80/134 (59.70%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 2   VALVGASGLPL--------GRWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVP-GADFHW 61
           +ALVGA  +P          R+ VH+VN L+N  L VHC+SKDNDL YQ L+  G DF W
Sbjct: 13  LALVGADRIPRTPFVPVNPARYYVHVVNGLSNYDLGVHCQSKDNDLGYQHLINRGDDFQW 72

Query: 62  SFRVNVWGTTLFWCNLQKSSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYL 121
           +F+VN++GTTLFWC L+K  AY SF++FWPES+N WLR RC  +  GNCIWTAKDDGIYL
Sbjct: 73  NFKVNIFGTTLFWCKLEKQDAYVSFESFWPESRNFWLRDRCGPQ--GNCIWTAKDDGIYL 132

Query: 122 KNIPDNVEELVHKW 126
           +N P NV+E VHKW
Sbjct: 133 RNNPTNVDEYVHKW 144

[Close]

BLAST of MC09g_new0006 vs. NCBI nr
Match: XP_022143724.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 165 bits (417), Expect = 1.44e-49
Identity = 72/116 (62.07%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 14  RWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWGTTLFWCNLQKSSA 73
           +W+VH+VN L+N  L  HCKS+D DL    L  GA+  WSF+ NVWGTTLFWC L+K   
Sbjct: 32  KWHVHVVNGLSNATLFAHCKSRDTDLGEHNLNRGAEIQWSFKENVWGTTLFWCFLKKPGG 91

Query: 74  YASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKNIPDNVEELVHKWTSS 129
            ASFD FW E  + WL YRCT+   G CIWTAKDDGIY++NIPDN++ELVHKWTSS
Sbjct: 92  SASFDVFWREVDHLWLHYRCTN--DGTCIWTAKDDGIYIRNIPDNLDELVHKWTSS 145

[Close]

BLAST of MC09g_new0006 vs. NCBI nr
Match: XP_022933268.1 (S-protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 163 bits (412), Expect = 9.40e-49
Identity = 77/134 (57.46%), Postives = 96/134 (71.64%), Query Frame = 0


Query: 2   VALVGASGL-----PLG--RWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVP-GADFHWS 61
           VALVGA        PLG  R+ +H+VN L+N  L VHC+SKD+DL Y  L+  G D+ W+
Sbjct: 13  VALVGAQVPRVALPPLGPSRYYIHVVNGLSNLGLLVHCQSKDDDLGYHHLLNHGDDYQWN 72

Query: 62  FRVNVWGTTLFWCNLQKSSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLK 121
           F+VN WGTTLFWC ++   AY SF++FWPES++ WLR RC   T G CIWTAKDDGIYL+
Sbjct: 73  FKVNFWGTTLFWCKMETPDAYVSFESFWPESQHLWLRDRCKHGTVGTCIWTAKDDGIYLR 132

Query: 122 NIPDNVEELVHKWT 127
           N   NV+EL+HKWT
Sbjct: 133 NFLANVDELIHKWT 146

[Close]

BLAST of MC09g_new0006 vs. ExPASy TrEMBL
Match: A0A6J1CS23 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013665 PE=3 SV=1)

HSP 1 Score: 286 bits (731), Expect = 1.01e-97
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MVALVGASGLPLGRWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWG 60
           MVALVGASGLPLGRWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWG
Sbjct: 18  MVALVGASGLPLGRWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWG 77

Query: 61  TTLFWCNLQKSSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKNIPDNVE 120
           TTLFWCNLQKSSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKNIPDNVE
Sbjct: 78  TTLFWCNLQKSSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKNIPDNVE 137

Query: 121 ELVHKWTSS 129
           ELVHKWTSS
Sbjct: 138 ELVHKWTSS 146

[Close]

BLAST of MC09g_new0006 vs. ExPASy TrEMBL
Match: A0A6J1CQI8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013653 PE=3 SV=1)

HSP 1 Score: 201 bits (512), Expect = 3.32e-64
Identity = 90/134 (67.16%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 3   ALVGASGLPLG--------RWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSF 62
           ALVGA   P G        RW+VH+VN LNN+ L VHCKSKD+DL YQRLV GADF WSF
Sbjct: 20  ALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLVRGADFQWSF 79

Query: 63  RVNVWGTTLFWCNLQKSSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKN 122
           +VN WGTTLFWCNL K  AY +F+ FWPES+N WLR RC + T+G+CIWTAKDDGIYL+N
Sbjct: 80  KVNFWGTTLFWCNLHKPGAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIYLRN 139

Query: 123 IPDNVEELVHKWTS 128
           IP N EEL+HKW S
Sbjct: 140 IPTNSEELIHKWIS 153

[Close]

BLAST of MC09g_new0006 vs. ExPASy TrEMBL
Match: A0A6J1CQ65 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013561 PE=3 SV=1)

HSP 1 Score: 165 bits (417), Expect = 6.97e-50
Identity = 72/116 (62.07%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 14  RWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWGTTLFWCNLQKSSA 73
           +W+VH+VN L+N  L  HCKS+D DL    L  GA+  WSF+ NVWGTTLFWC L+K   
Sbjct: 32  KWHVHVVNGLSNATLFAHCKSRDTDLGEHNLNRGAEIQWSFKENVWGTTLFWCFLKKPGG 91

Query: 74  YASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKNIPDNVEELVHKWTSS 129
            ASFD FW E  + WL YRCT+   G CIWTAKDDGIY++NIPDN++ELVHKWTSS
Sbjct: 92  SASFDVFWREVDHLWLHYRCTN--DGTCIWTAKDDGIYIRNIPDNLDELVHKWTSS 145

[Close]

BLAST of MC09g_new0006 vs. ExPASy TrEMBL
Match: A0A6J1F497 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440333 PE=3 SV=1)

HSP 1 Score: 163 bits (412), Expect = 4.55e-49
Identity = 77/134 (57.46%), Postives = 96/134 (71.64%), Query Frame = 0


Query: 2   VALVGASGL-----PLG--RWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVP-GADFHWS 61
           VALVGA        PLG  R+ +H+VN L+N  L VHC+SKD+DL Y  L+  G D+ W+
Sbjct: 13  VALVGAQVPRVALPPLGPSRYYIHVVNGLSNLGLLVHCQSKDDDLGYHHLLNHGDDYQWN 72

Query: 62  FRVNVWGTTLFWCNLQKSSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLK 121
           F+VN WGTTLFWC ++   AY SF++FWPES++ WLR RC   T G CIWTAKDDGIYL+
Sbjct: 73  FKVNFWGTTLFWCKMETPDAYVSFESFWPESQHLWLRDRCKHGTVGTCIWTAKDDGIYLR 132

Query: 122 NIPDNVEELVHKWT 127
           N   NV+EL+HKWT
Sbjct: 133 NFLANVDELIHKWT 146

[Close]

BLAST of MC09g_new0006 vs. ExPASy TrEMBL
Match: A0A6J1EZA2 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440334 PE=3 SV=1)

HSP 1 Score: 161 bits (407), Expect = 2.62e-48
Identity = 76/134 (56.72%), Postives = 94/134 (70.15%), Query Frame = 0


Query: 2   VALVGAS----GLPL---GRWNVHIVNKLNNDVLAVHCKSKDNDLRYQRLVP-GADFHWS 61
           VALVGA      LP     R+ +H+VN L+   L VHC+SKD+DL Y  L+  G D+ W+
Sbjct: 13  VALVGAQVPRVSLPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLEYHHLLNHGDDYQWN 72

Query: 62  FRVNVWGTTLFWCNLQKSSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLK 121
           F+VN WGTTLFWC L+   AY SF++FWPES++ WLR RC   T G CIWTAKDDGIYL+
Sbjct: 73  FKVNFWGTTLFWCKLETPDAYVSFESFWPESQHLWLRDRCKHGTVGTCIWTAKDDGIYLR 132

Query: 122 NIPDNVEELVHKWT 127
           N   NV+EL+HKWT
Sbjct: 133 NFLANVDELIHKWT 146

[Close]

BLAST of MC09g_new0006 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 85.9 bits (211), Expect = 2.6e-17
Identity = 44/118 (37.29%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 12  LGRWNVHIVNKL-NNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWGTTLFWCNLQK 71
           +  W V + N L   + L +HCKSK+NDL    L     F W+F  N+  +TLFWC + K
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 72  SSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKNIPDNVEELVHKWTS 129
              + +   FW +     L +RC  +   NC+WTAK+DG+YL N     + L  KW S
Sbjct: 98  DDGHMNVKVFWDD---VILFHRCDWK---NCVWTAKNDGLYLWNSAIGEDVLSEKWKS 149

[Close]

BLAST of MC09g_new0006 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-17
Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 0


Query: 12  LGRWNVHIVNKL-NNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWGTTLFWCNLQK 71
           +  W V +VN L   + L +HCKSK++DL    L     F W+F  N+  +T FWC + K
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 72  SSAYASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKNIPDNVEELVHKW 127
            + + + + FW +     L +RC  +   NCIWTAK DG+YL N     + L  KW
Sbjct: 98  DNGHMNVNVFWDD---VILFHRCGWK---NCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of MC09g_new0006 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 72.0 bits (175), Expect = 3.9e-13
Identity = 37/92 (40.22%), Postives = 50/92 (54.35%), Query Frame = 0


Query: 20  VNKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWGTTLFWCNLQKSSAYASFDT 79
           +N  N ++L VHCKSK+ND+  + L  G    +SF+ N WGTT FWCNL K   Y  +  
Sbjct: 32  LNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRG 91

Query: 80  FWPESKNQWLRYRCTDRTKGNCIWTAKDDGIY 112
               +  Q +     D +  N  W A+DDGIY
Sbjct: 92  I---TAYQAIGLFAKDGSSYN--WLARDDGIY 118

[Close]

BLAST of MC09g_new0006 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 67.8 bits (164), Expect = 7.4e-12
Identity = 40/116 (34.48%), Postives = 57/116 (49.14%), Query Frame = 0


Query: 19  IVNKLNNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWGTTLFWCNLQKS---SAYA 78
           + N+LNN VL V C+SKD++L    L  G     +F  NVW  TLFWCNL K      + 
Sbjct: 26  VKNELNNKVLGVRCRSKDDNLGDHILRVGQMTKNNFDDNVWRRTLFWCNLWKGPDFKLHV 85

Query: 79  SFDTFWPESKNQWL-----RYRCTDRTKGNCIWTAKDDGIYLKNIPDNVEELVHKW 127
           +FD +    ++QW      RY          +W A++DGIY    P+   +  + W
Sbjct: 86  AFDAY----RSQWKADIGPRY----------LWIAREDGIYYTQHPETPPKKKYDW 127

[Close]

BLAST of MC09g_new0006 vs. TAIR 10
Match: AT5G04047.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-10
Identity = 35/119 (29.41%), Postives = 58/119 (48.74%), Query Frame = 0


Query: 15  WNVHIVNKL-NNDVLAVHCKSKDNDLRYQRLVPGADFHWSFRVNVWGTTLFWCNLQKSSA 74
           +N+ I N+L  N  L ++C+S          +P  +  W+ +  V+  TL WCN+     
Sbjct: 28  FNIQISNQLGGNKQLMINCRSGKQQATKVDFLP-FNTVWTLKFTVFPKTLIWCNVWMGPN 87

Query: 75  Y---ASFDTFWPESKNQWLRYRCTDRTKGNCIWTAKDDGIYLKNIPDNVEELVHKWTSS 130
           Y   A F+ F    K  ++   C  R    C W A++DGIY++N      +L++KW S+
Sbjct: 88  YVHHAKFNAF--IGKESFIHDICGGRKPNICFWQAQEDGIYVRNNATGTFKLMYKWDST 143

The following BLAST results are available for this feature:

BLAST of MC09g_new0006 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2HQ46	3.7e-16	37.29	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F4JLS0	4.8e-16	37.07	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q9LW22	5.5e-12	40.22	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
O23020	4.4e-09	33.64	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
Q40975	5.7e-09	34.65	Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1	[more]

BLAST of MC09g_new0006 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143852.1	2.08e-97	100.00	S-protein homolog 74-like [Momordica charantia]	[more]
XP_022143839.1	6.86e-64	67.16	S-protein homolog 1-like [Momordica charantia]	[more]
XP_004139726.1	1.56e-51	59.70	S-protein homolog 74-like [Cucumis sativus]	[more]
XP_022143724.1	1.44e-49	62.07	S-protein homolog 1-like [Momordica charantia]	[more]
XP_022933268.1	9.40e-49	57.46	S-protein homolog 1-like [Cucurbita moschata]	[more]

BLAST of MC09g_new0006 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CS23	1.01e-97	100.00	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013665 PE=3 SV=1	[more]
A0A6J1CQI8	3.32e-64	67.16	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013653 PE=3 SV=1	[more]
A0A6J1CQ65	6.97e-50	62.07	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013561 PE=3 SV=1	[more]
A0A6J1F497	4.55e-49	57.46	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440333 PE=3 SV=1	[more]
A0A6J1EZA2	2.62e-48	56.72	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440334 PE=3 SV=1	[more]

BLAST of MC09g_new0006 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29035.1	2.6e-17	37.29	Plant self-incompatibility protein S1 family	[more]
AT4G16295.1	3.4e-17	37.07	S-protein homologue 1	[more]
AT3G26880.1	3.9e-13	40.22	Plant self-incompatibility protein S1 family	[more]
AT5G04347.1	7.4e-12	34.48	Plant self-incompatibility protein S1 family	[more]
AT5G04047.1	1.4e-10	29.41	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 16..126 e-value: 2.4E-27 score: 95.5
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 13..127
None	No IPR available	PANTHER	PTHR31232:SF99	SUBFAMILY NOT NAMED	coord: 13..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g_new0006.1	MC09g_new0006.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane