MC09g1862 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g1862
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Nup54 domain-containing protein
Location	MC09: 23549441 .. 23553271 (-)
RNA-Seq Expression	MC09g1862
Synteny	MC09g1862

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAGTACAATGTTCGGAGCTCAACCGTCCTCCTCCGCCTTCGGCACTCCACAATCGACTCCTGCCTTCGGCACTCCGTCGTCCACTCCTGCCTTCGGAACTCCGTCGGCGTCTCCCGCATTTGGAAACCTTTCCTCAACTCCTGCCTTCGGGACTCCGTCTACGTCGACTTTTGGCACCGGCTTCGGATCGTCTCTCTTCTCCACTCCATTCTCTTCTCAGCCTTCACAACAGCCACAGCAGCAGCAGCAATCACCGCTGTTTCAGCAACCGCCCGCCACAGGATTCGGTTTCCAGACTCCGTTTGCCGCGCCTCAGTCCACTCCCTTTCCAAATGCTCAATTGACCACTCAGATGGCTCCGGTGGCGCCGCTTCCTTTCTCCATGGCAGATCGAGATATTCAAGTACGTTCTGAATGTAATCGGCAAGACCTAGCAATATCTCCTTTCTTCTTCTGTATCAGCGCCTATTTATTTTTCTTTCATTGTTTGCATCAGGCAATTGTTGAGGCTTACAAGGACGAGGCAGGAAACCCTAAGTATGCTTTCAAGGTTTGCTTCCCTGTTATAAACTGGCATTTATGTTTTTATTTGTACTTATACTTGAGTGTCGATTATCGTAACGAAGGATATGATTAATTTTCTTATAAGTTCATGGAAGTAATATGCTCATCATTTTACAGTAGATTCTAAATTGACGCTTGTGATGATTTTGCAGCATTTATTGTTCAGTGTAACCGATCCTCAATTTAGGGCTAAGCCTGCTGGTGTATCAGACGTGAGTTCAATATTTCGTGTTTTTTTAAGTCTGAAAATTTTAAATCTATTTCTATGTATTATTTTTCGTTGGATTCTGCACTAAGTTCAGAGAATAGTTTGCATTGCCAGATAATGTGGGCTGAGGCTATGACAAAGCTGGAAGGCATGGAAAGTGCTGATAGAGAGCGATTGTGGCCACAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGGTAATTTTTCAATTTACTGCAAAATGAGGTGTGAAATTCTTTGATTACTTTTTAAGATTCTTGTCTCAGTGCTTGAAGGTTGTGTGTGTCTTCCATGTATATGCTTAGTTCATCATGTTCTATGAGTTTTTAGCATAGCCTTTTGTTATAGATTCAATTTTCTTTTTCATCATTTCCTTCACTGGTGGTGAATTCACAGGTGTGTTGTTCTGCTGCATTAACTAATATTAATCAATTTTTTTTCCTGCATCATGGATCCAATTTGATACTTGGGTTCTGGATATCAGTGGGTGATCTAAAGTTTCATTTGAGAGATGGCACCAGTGACTGTATAATTATATGTTTAGTTCACCTGTTTCACAATATTAAATTAATTTTTATTTTTAACTCAATGATTATATTAGTTATGTTTTATATTAATTATATTTTCTTTTCAATATTGTACTTAATTTTAACTGCTTTAATATTCGTCTATTTCCACAATTTTGTTTGAAATAAATATTTAGTTTAATGATTTTTGACATAAATAATAGTTTTATTTAATTAAATAAAAACAATTGTTTGAGGACTAACTGAATTCTTAAAATTAGGAAAGATTTCAATTTTTGGTGAAATTATGGTTTCAATTATTACGGTGAAGAAAAACTAAATTTAAATCTACAAATCAAGGATTAACATTATTAGAGAATAAAATTCTTATATTGACCAAGATTGTTATCATTTAAAAAAAAAACCAGCAAAATTGTTTTAGATGTTGTATATATTGGACAATTTCAAATTTTCTCGCGGCATATGTGCCGCCTTTGTGCCTGCAGTATATTCGCCCTTGCCGGATGTCATTATGCTGACAAATGCTAATGCATGGCAAGTAGTTATTTCTTTTCCCTTCCATATAATAATAATGGTCCATTTGCTATTGACTTTCAAAACTATGTAAGAAAGGTAAACGGATTTTTAATTATTCAACTCACATAAAATGTCTTGGAGTCATATTTGATAGGATGCCAATTATGTTTTATTCGATGCATCAATGATTGGTGAAACAAATGTGATAGCTTCCTGATAAGTTTTCTGTTTCCATTTATGATTACAAAATTTGGTCTTGCGTAAATATGATTATCTTTCTGTTTGAGTATGTACCGATAGTACGTGTTCGTAGTTGTAATGTGCTGAGCCTGCCTCTGCATGTACTTCCGGTATTCTTTTTTCAAGTAAATGCTCTTGAAAGTTGTGAAATTAAGAATCTGTTTCGTTTCAGTTACTGTTAGTAAAATTATTTTTTAACATCTAAAAAATCCTGACATTAGCTCATTTCTTGAAACTATTTTTTGTGCATACTTTTTTGCCCATTTGAAGCATATATTTTTCTTTGTAATGAACTTGTGTTTGCTGACTTAAATACCCTGGTTTCTTGGACTGACGCTCTAGTGGGGTTAATGTAGATTCAAGATGAAGTCATTCTTTCTGATGCTGAGAGACTGCGGATGACCCAAAGCAATGTCAAAATGGTAGGTTTCTGCTCCATTATTGATAAAATTTAAGTTTTCTTTTCCTGATTGATGTTTGATGCAGCTTCAGAGGCATTTTCTAGCTGACACTCTACCTTGGGTCCAAAGATTGCGGCAGAAGGAGCAAGGTCTACAAAGGCGTCTCTTGAGAGTATGTATTATTTCAGCTAATAAATGAGCAAATATGCAAAAAAGTGCTATGAGTTTGATCTTCTCATCACCCCCCACCTCCCCACCCCCCAAGAAAAAAAAGGTTAATTATGCTTCTTATGCCAAACTGCATCTAAATTAAAGTTTACCTTCTTTTGTTTCCAAATTTAGGTCATGAGAATTGTGGAGGCACTAGAAAGTAAGGGTTGCCGAGTGCCTGTAATGAAAGGGGAGGCTGAATTGGCTGAGAAGTTAGCTTTAATAACGAGGCAGGTGGGTATCCCTCACCCATTTTACTTTTATTGCCAAATAAGACACTAAAGTTCTCTTGGGAAGTTAGTAGGTCATTTCCGTATAGTTTGATCAAATTCAAATTTATCCTTGTTATCAATATAATATGTAAACAATTCCAAAATATAATATGTTCTATAGTTATTTTACTTGTAATGAGTAATTCTAATTTCAAAAATATTTCAAATGTTTAAAGGCCATATTCCTCTTTATCAAGTCAGTGGGGTAAAATATGTTACTTATCCCAAAAGGTTGCATAGAAATAATGTACTTGGACACGTTTCAGTTGAAAGGATCCGGCGCAGAGCTTTCTAGGAGGGTGCAAAATTTGCTCACATTTACTCGTGGTCAAGCAAATGGCTCCAATTCTGGTAATTCCATCTATCTTCAAGGATCAGCAAAAATACACGAGCAGAGTCTTGCCGATATGCAGGAGGTGCGTATAATTTAAGTGTTTGGAGTTTTGCTGGAAAAAAAGTTAACAGGGTGCAATTTTTGATAAATACGTCATGTTATTGTCCAATTTATTATTCAACTTTATTTGCATGTCGTGTGTCAGGTTTTGCAGCAGCAGACCGAGGCCATTGCTAGACTTGGTATTGTTTTAAAGCGAGATGTTAGAGATATGGAAATCATAATGGCTGAAGACAAAGAGATGACAGATGATGCTAGTTAAAAGAAATCAAGTTCAGATTTCTAGTTGATCGTTTTGTTTTGTGATAGATATTTCTTGCTTCATTTTTCTGAAGTAAAAAAAATCCGTGTTCACAAATTATGTACTGCACAAGTAATTTTGCCAAGTGGTGGCCAGCATTTCTTGAAAAACCAGAGTTAGTACTTGGTTAACATTGGGTCAACTTGAACTGATTAATACTTATTCGGT

mRNA sequence

GCAAGTACAATGTTCGGAGCTCAACCGTCCTCCTCCGCCTTCGGCACTCCACAATCGACTCCTGCCTTCGGCACTCCGTCGTCCACTCCTGCCTTCGGAACTCCGTCGGCGTCTCCCGCATTTGGAAACCTTTCCTCAACTCCTGCCTTCGGGACTCCGTCTACGTCGACTTTTGGCACCGGCTTCGGATCGTCTCTCTTCTCCACTCCATTCTCTTCTCAGCCTTCACAACAGCCACAGCAGCAGCAGCAATCACCGCTGTTTCAGCAACCGCCCGCCACAGGATTCGGTTTCCAGACTCCGTTTGCCGCGCCTCAGTCCACTCCCTTTCCAAATGCTCAATTGACCACTCAGATGGCTCCGGTGGCGCCGCTTCCTTTCTCCATGGCAGATCGAGATATTCAAGCAATTGTTGAGGCTTACAAGGACGAGGCAGGAAACCCTAAGTATGCTTTCAAGCATTTATTGTTCAGTGTAACCGATCCTCAATTTAGGGCTAAGCCTGCTGGTGTATCAGACATAATGTGGGCTGAGGCTATGACAAAGCTGGAAGGCATGGAAAGTGCTGATAGAGAGCGATTGTGGCCACAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGATTCAAGATGAAGTCATTCTTTCTGATGCTGAGAGACTGCGGATGACCCAAAGCAATGTCAAAATGCTTCAGAGGCATTTTCTAGCTGACACTCTACCTTGGGTCCAAAGATTGCGGCAGAAGGAGCAAGGTCTACAAAGGCGTCTCTTGAGAGTCATGAGAATTGTGGAGGCACTAGAAAGTAAGGGTTGCCGAGTGCCTGTAATGAAAGGGGAGGCTGAATTGGCTGAGAAGTTAGCTTTAATAACGAGGCAGTTGAAAGGATCCGGCGCAGAGCTTTCTAGGAGGGTGCAAAATTTGCTCACATTTACTCGTGGTCAAGCAAATGGCTCCAATTCTGGTAATTCCATCTATCTTCAAGGATCAGCAAAAATACACGAGCAGAGTCTTGCCGATATGCAGGAGGTTTTGCAGCAGCAGACCGAGGCCATTGCTAGACTTGGTATTGTTTTAAAGCGAGATGTTAGAGATATGGAAATCATAATGGCTGAAGACAAAGAGATGACAGATGATGCTAGTTAAAAGAAATCAAGTTCAGATTTCTAGTTGATCGTTTTGTTTTGTGATAGATATTTCTTGCTTCATTTTTCTGAAGTAAAAAAAATCCGTGTTCACAAATTATGTACTGCACAAGTAATTTTGCCAAGTGGTGGCCAGCATTTCTTGAAAAACCAGAGTTAGTACTTGGTTAACATTGGGTCAACTTGAACTGATTAATACTTATTCGGT

Coding sequence (CDS)

GCAAGTACAATGTTCGGAGCTCAACCGTCCTCCTCCGCCTTCGGCACTCCACAATCGACTCCTGCCTTCGGCACTCCGTCGTCCACTCCTGCCTTCGGAACTCCGTCGGCGTCTCCCGCATTTGGAAACCTTTCCTCAACTCCTGCCTTCGGGACTCCGTCTACGTCGACTTTTGGCACCGGCTTCGGATCGTCTCTCTTCTCCACTCCATTCTCTTCTCAGCCTTCACAACAGCCACAGCAGCAGCAGCAATCACCGCTGTTTCAGCAACCGCCCGCCACAGGATTCGGTTTCCAGACTCCGTTTGCCGCGCCTCAGTCCACTCCCTTTCCAAATGCTCAATTGACCACTCAGATGGCTCCGGTGGCGCCGCTTCCTTTCTCCATGGCAGATCGAGATATTCAAGCAATTGTTGAGGCTTACAAGGACGAGGCAGGAAACCCTAAGTATGCTTTCAAGCATTTATTGTTCAGTGTAACCGATCCTCAATTTAGGGCTAAGCCTGCTGGTGTATCAGACATAATGTGGGCTGAGGCTATGACAAAGCTGGAAGGCATGGAAAGTGCTGATAGAGAGCGATTGTGGCCACAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGATTCAAGATGAAGTCATTCTTTCTGATGCTGAGAGACTGCGGATGACCCAAAGCAATGTCAAAATGCTTCAGAGGCATTTTCTAGCTGACACTCTACCTTGGGTCCAAAGATTGCGGCAGAAGGAGCAAGGTCTACAAAGGCGTCTCTTGAGAGTCATGAGAATTGTGGAGGCACTAGAAAGTAAGGGTTGCCGAGTGCCTGTAATGAAAGGGGAGGCTGAATTGGCTGAGAAGTTAGCTTTAATAACGAGGCAGTTGAAAGGATCCGGCGCAGAGCTTTCTAGGAGGGTGCAAAATTTGCTCACATTTACTCGTGGTCAAGCAAATGGCTCCAATTCTGGTAATTCCATCTATCTTCAAGGATCAGCAAAAATACACGAGCAGAGTCTTGCCGATATGCAGGAGGTTTTGCAGCAGCAGACCGAGGCCATTGCTAGACTTGGTATTGTTTTAAAGCGAGATGTTAGAGATATGGAAATCATAATGGCTGAAGACAAAGAGATGACAGATGATGCTAGTTAA

Protein sequence

ASTMFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKRDVRDMEIIMAEDKEMTDDAS

Homology

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BLAST of MC09g1862 vs. ExPASy Swiss-Prot
Match: Q8GYF7 (Nuclear pore complex protein NUP54 OS=Arabidopsis thaliana OX=3702 GN=NUP54 PE=1 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 7.8e-139
Identity = 269/378 (71.16%), Postives = 316/378 (83.60%), Query Frame = 0


Query: 14  FGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGT-GFGSSLFSTPFS 73
           FGTP S+P+FGTPSSTPAFGT  +SPAFG  S+TPAFGTPS  +F + GFGSSLFS+PFS
Sbjct: 2   FGTPSSSPSFGTPSSTPAFGT--SSPAFGTPSATPAFGTPSNPSFSSGGFGSSLFSSPFS 61

Query: 74  SQPSQQPQQQQQ----SPLFQQPPATGFGFQTPF----AAPQSTPFPNAQLTTQMAPVAP 133
           SQ  QQ QQQQQ    S LFQQ P++ FGFQ+PF       Q TPFPNAQLTTQMAPVAP
Sbjct: 62  SQQPQQQQQQQQQQQPSSLFQQQPSSNFGFQSPFNNTAQQQQQTPFPNAQLTTQMAPVAP 121

Query: 134 LPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKLE 193
           +P+S+ADRD+QAI+EAYK++  NPKYAF+HLLFSVT+PQ+R KPA VSDIMWAEAM+KLE
Sbjct: 122 IPYSLADRDVQAIIEAYKEDPTNPKYAFQHLLFSVTEPQYRVKPAAVSDIMWAEAMSKLE 181

Query: 194 GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPW 253
           GM+S +RERLWPQLVQGFKDLSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P 
Sbjct: 182 GMDSTERERLWPQLVQGFKDLSQRLKLQDEVLVSDRDRIKTTQSNVKMLQRHLQASTFPS 241

Query: 254 VQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS 313
           ++RLRQKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Sbjct: 242 IERLRQKEQSLQRRMLRVMRIIEGLEGKGFRLPLTKGEAELSEKLTAITRQVKGPGAELS 301

Query: 314 RRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKRD 373
           RRVQ+L T +R QAN   +G+S+YL GS KI EQSL DMQEVLQQ+TEAI RLG VLKRD
Sbjct: 302 RRVQSLQTISRAQANSIAAGSSLYLPGSTKIDEQSLIDMQEVLQQETEAIGRLGNVLKRD 361

Query: 374 VRDMEIIMAEDKEMTDDA 383
           +RDMEI++AED EM  D+
Sbjct: 362 MRDMEIMVAEDTEMALDS 377

[Close]

BLAST of MC09g1862 vs. ExPASy Swiss-Prot
Match: Q9VDV3 (Nuclear pore complex protein Nup58 OS=Drosophila melanogaster OX=7227 GN=Nup58 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.9e-08
Identity = 53/134 (39.55%), Postives = 72/134 (53.73%), Query Frame = 0


Query: 5   FGAQPSSS-AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTP-STSTFGTGF 64
           FGA  +++ AFGT  +TPAFG P++T AFG P+A+PAFG  ++TPAFG P +T  FG   
Sbjct: 82  FGATSTAAPAFGTAAATPAFGIPAATSAFGAPAATPAFGAAAATPAFGAPAATPAFGAPA 141

Query: 65  GSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATG-----FGFQTP-FAAPQSTPFPNAQLT 124
            +S F  P ++     P   Q S      PA G     F F TP  +AP + P      T
Sbjct: 142 ATSAFGAPAATTAFGAPASTQASAFGAPAPAVGTVAPTFSFATPATSAPTTAPPAFGFGT 201

Query: 125 TQMAPVAPLPFSMA 131
           T     A +P S++
Sbjct: 202 TATTAAAAMPASLS 215

[Close]

BLAST of MC09g1862 vs. ExPASy Swiss-Prot
Match: Q8BTS4 (Nuclear pore complex protein Nup54 OS=Mus musculus OX=10090 GN=Nup54 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.2e-07
Identity = 52/204 (25.49%), Postives = 102/204 (50.00%), Query Frame = 0


Query: 168 PAGVSDIMWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQ 227
           PAGV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +  
Sbjct: 304 PAGVDPIIWEQAK-----VDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIIS 363

Query: 228 SNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAE 287
            ++  LQ++    T+  + + ++K   L  R L+V+   E     G    +   E +L  
Sbjct: 364 EDISELQKN-QTTTMAKIAQYKRKLMELSHRTLQVLIKQEIQRKSG--YAIQADEEQLRV 423

Query: 288 KLALITRQLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVL 347
           +L  I  +L  +  +   R+  L++  R Q    N   ++  +    I    L ++++ L
Sbjct: 424 QLDTIQGEL-NAPTQFKGRLNELMSQIRMQ----NHFGAVKSEEKYYIDADLLREIKQHL 483

Query: 348 QQQTEAIARLGIVLKRDVRDMEII 372
           +QQ E ++ L  ++K D+ D++++
Sbjct: 484 KQQQEGLSHLISIIKDDLEDIKLV 494

[Close]

BLAST of MC09g1862 vs. ExPASy Swiss-Prot
Match: P70582 (Nuclear pore complex protein Nup54 OS=Rattus norvegicus OX=10116 GN=Nup54 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.2e-07
Identity = 52/204 (25.49%), Postives = 102/204 (50.00%), Query Frame = 0


Query: 168 PAGVSDIMWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQ 227
           PAGV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +  
Sbjct: 304 PAGVDPIIWEQAK-----VDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIIS 363

Query: 228 SNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAE 287
            ++  LQ++    T+  + + ++K   L  R L+V+   E     G    +   E +L  
Sbjct: 364 EDISELQKN-QTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSG--YAIQAEEEQLRV 423

Query: 288 KLALITRQLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVL 347
           +L  I  +L  +  +   R+  L++  R Q    N   ++  +    I    L ++++ L
Sbjct: 424 QLDTIQGEL-NAPTQFKGRLNELMSQIRMQ----NHFGAVKSEEKYYIDADLLREIKQHL 483

Query: 348 QQQTEAIARLGIVLKRDVRDMEII 372
           +QQ E ++ L  ++K D+ D++++
Sbjct: 484 KQQQEGLSHLISIIKDDLEDIKLV 494

[Close]

BLAST of MC09g1862 vs. ExPASy Swiss-Prot
Match: Q7Z3B4 (Nucleoporin p54 OS=Homo sapiens OX=9606 GN=NUP54 PE=1 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-06
Identity = 51/204 (25.00%), Postives = 102/204 (50.00%), Query Frame = 0


Query: 168 PAGVSDIMWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQ 227
           PAGV  I+W +A      +++ D E+L P  + GFK+L +RLK+QD++      RL +  
Sbjct: 301 PAGVDPIIWEQAK-----VDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIIS 360

Query: 228 SNVKMLQRHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAE 287
            ++  LQ++    ++  + + ++K   L  R L+V+   E     G    +   E +L  
Sbjct: 361 EDISELQKN-QTTSVAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSG--YAIQADEEQLRV 420

Query: 288 KLALITRQLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVL 347
           +L  I  +L  +  +   R+  L++  R Q    N   ++  +    I    L ++++ L
Sbjct: 421 QLDTIQGEL-NAPTQFKGRLNELMSQIRMQ----NHFGAVRSEERYYIDADLLREIKQHL 480

Query: 348 QQQTEAIARLGIVLKRDVRDMEII 372
           +QQ E ++ L  ++K D+ D++++
Sbjct: 481 KQQQEGLSHLISIIKDDLEDIKLV 491

[Close]

BLAST of MC09g1862 vs. NCBI nr
Match: XP_022151739.1 (nuclear pore complex protein NUP54 [Momordica charantia])

HSP 1 Score: 712 bits (1837), Expect = 7.70e-258
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 4   MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFG 63
           MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFG
Sbjct: 1   MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFG 60

Query: 64  SSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVA 123
           SSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVA
Sbjct: 61  SSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVA 120

Query: 124 PLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKL 183
           PLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKL
Sbjct: 121 PLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKL 180

Query: 184 EGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLP 243
           EGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLP
Sbjct: 181 EGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLP 240

Query: 244 WVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL 303
           WVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL
Sbjct: 241 WVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL 300

Query: 304 SRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKR 363
           SRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKR
Sbjct: 301 SRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKR 360

Query: 364 DVRDMEIIMAEDKEMTDDAS 383
           DVRDMEIIMAEDKEMTDDAS
Sbjct: 361 DVRDMEIIMAEDKEMTDDAS 380

[Close]

BLAST of MC09g1862 vs. NCBI nr
Match: XP_038893426.1 (nuclear pore complex protein NUP54 [Benincasa hispida])

HSP 1 Score: 666 bits (1718), Expect = 1.46e-239
Identity = 359/389 (92.29%), Postives = 370/389 (95.12%), Query Frame = 0


Query: 4   MFGAQPSSSAFGTPQSTPAFGTP---------SSTPAFGTPSASPAFGNLSSTPAFGTPS 63
           MFGAQPSSSAFGTPQSTPAFGTP         +STPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQPSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 64  TSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQ 123
           TS+F TGFGSSLFSTPFSSQPSQ  QQ QQSPLF QP ATGFGFQTPFAAPQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQPQQQLQQSPLFPQPAATGFGFQTPFAAPQSTPFPNAQ 120

Query: 124 LTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDI 183
           LTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+R KPAGVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRVKPAGVSDI 180

Query: 184 MWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQ 243
           MWAEAM KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD++RLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSDRLRMTQSNVKMLQ 240

Query: 244 RHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 303
           RHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300

Query: 304 QLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 363
           QLKGSGAELSRRVQNLLT TRGQANGS++GNSIYLQGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSRRVQNLLTITRGQANGSSAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 364 ARLGIVLKRDVRDMEIIMAEDKEMTDDAS 383
           ARLG VLKRDVRDMEIIMAED+EMTDDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDREMTDDAS 389

[Close]

BLAST of MC09g1862 vs. NCBI nr
Match: XP_004135312.1 (nuclear pore complex protein NUP54 [Cucumis sativus] >KGN51680.1 hypothetical protein Csa_009114 [Cucumis sativus])

HSP 1 Score: 656 bits (1693), Expect = 9.38e-236
Identity = 355/389 (91.26%), Postives = 363/389 (93.32%), Query Frame = 0


Query: 4   MFGAQPSSSAFGTPQS---------TPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPS 63
           MFGAQPSSSAFGTPQS         TPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 64  TSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQ 123
           TS+F TGFGSSLFSTPFSSQPSQQ QQ QQSP+F Q  ATGFGFQTPF APQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSATGFGFQTPFTAPQSTPFPNAQ 120

Query: 124 LTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDI 183
           LTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+R KP GVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDI 180

Query: 184 MWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQ 243
           MWAEAM KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 244 RHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 303
           RHFLADTLPWVQRL+QKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300

Query: 304 QLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 363
           QLKGSGAELSRRVQNLLT TRGQANGS  GNSIY QGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 364 ARLGIVLKRDVRDMEIIMAEDKEMTDDAS 383
           ARLG VLKRDVRDMEIIMAEDKEM DDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of MC09g1862 vs. NCBI nr
Match: XP_008446043.1 (PREDICTED: nuclear pore complex protein NUP54 [Cucumis melo] >KAA0034202.1 nuclear pore complex protein NUP54 [Cucumis melo var. makuwa] >TYK15718.1 nuclear pore complex protein NUP54 [Cucumis melo var. makuwa])

HSP 1 Score: 655 bits (1690), Expect = 2.69e-235
Identity = 356/389 (91.52%), Postives = 365/389 (93.83%), Query Frame = 0


Query: 4   MFGAQPSSSAFGTPQSTPAFGTP---------SSTPAFGTPSASPAFGNLSSTPAFGTPS 63
           MFGAQ SSSAFGTPQSTPAFGTP         +STPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 64  TSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQ 123
           TS+F TGFGSSLFSTPFSSQPSQQ QQ QQS LF Q  ATGFGFQTPFAAPQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120

Query: 124 LTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDI 183
           LTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+RAKP GVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180

Query: 184 MWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQ 243
           MWAEAM KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 244 RHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 303
           RHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300

Query: 304 QLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 363
           QLKGSGAELS+RVQNLLT TRGQANGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 364 ARLGIVLKRDVRDMEIIMAEDKEMTDDAS 383
           ARLG VLKRDVRDMEIIMAEDKEM DDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of MC09g1862 vs. NCBI nr
Match: KAG6573649.1 (Nuclear pore complex protein NUP54, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 643 bits (1659), Expect = 2.65e-230
Identity = 342/379 (90.24%), Postives = 358/379 (94.46%), Query Frame = 0


Query: 5   FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFGS 64
           FG   S+ AFGTPQSTPAFGTP+STPAFGTPSASPAFGN SSTPAFGTPS+S+F TGFGS
Sbjct: 28  FGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNFSSTPAFGTPSSSSFATGFGS 87

Query: 65  SLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVAP 124
           SLFSTPFSSQPSQ  QQQQQSPLFQ P ATGFGFQTPFAAPQS+PFPNAQLTTQMAPVAP
Sbjct: 88  SLFSTPFSSQPSQPQQQQQQSPLFQLPAATGFGFQTPFAAPQSSPFPNAQLTTQMAPVAP 147

Query: 125 LPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKLE 184
           LPFSMADRDIQAIVEAYKD+AGNPKYAFK LLFSVTDPQ+RAKPAGVSDIMWAEAM KLE
Sbjct: 148 LPFSMADRDIQAIVEAYKDDAGNPKYAFKRLLFSVTDPQYRAKPAGVSDIMWAEAMAKLE 207

Query: 185 GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPW 244
           GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVK LQRHFLADTLPW
Sbjct: 208 GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKTLQRHFLADTLPW 267

Query: 245 VQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS 304
           +QRL+QKEQGLQRRLLR+MR+VEALESKGCRVP+M GEAELAE+LALITRQL+GSGAELS
Sbjct: 268 IQRLKQKEQGLQRRLLRMMRVVEALESKGCRVPIMTGEAELAERLALITRQLRGSGAELS 327

Query: 305 RRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKRD 364
           RRV+NLLT T GQANGS +GNSIYLQGS KIHEQSLADMQEVLQQQTEAIARLG VLKRD
Sbjct: 328 RRVKNLLTITCGQANGSGAGNSIYLQGSTKIHEQSLADMQEVLQQQTEAIARLGTVLKRD 387

Query: 365 VRDMEIIMAEDKEMTDDAS 383
           VRDMEIIMAEDKEM DD S
Sbjct: 388 VRDMEIIMAEDKEMIDDLS 406

[Close]

BLAST of MC09g1862 vs. ExPASy TrEMBL
Match: A0A6J1DDY9 (nuclear pore complex protein NUP54 OS=Momordica charantia OX=3673 GN=LOC111019650 PE=4 SV=1)

HSP 1 Score: 712 bits (1837), Expect = 3.73e-258
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 4   MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFG 63
           MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFG
Sbjct: 1   MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFG 60

Query: 64  SSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVA 123
           SSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVA
Sbjct: 61  SSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVA 120

Query: 124 PLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKL 183
           PLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKL
Sbjct: 121 PLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKL 180

Query: 184 EGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLP 243
           EGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLP
Sbjct: 181 EGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLP 240

Query: 244 WVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL 303
           WVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL
Sbjct: 241 WVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL 300

Query: 304 SRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKR 363
           SRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKR
Sbjct: 301 SRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKR 360

Query: 364 DVRDMEIIMAEDKEMTDDAS 383
           DVRDMEIIMAEDKEMTDDAS
Sbjct: 361 DVRDMEIIMAEDKEMTDDAS 380

[Close]

BLAST of MC09g1862 vs. ExPASy TrEMBL
Match: A0A0A0KPW8 (Nup54 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589970 PE=4 SV=1)

HSP 1 Score: 656 bits (1693), Expect = 4.54e-236
Identity = 355/389 (91.26%), Postives = 363/389 (93.32%), Query Frame = 0


Query: 4   MFGAQPSSSAFGTPQS---------TPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPS 63
           MFGAQPSSSAFGTPQS         TPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQPSSSAFGTPQSSPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 64  TSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQ 123
           TS+F TGFGSSLFSTPFSSQPSQQ QQ QQSP+F Q  ATGFGFQTPF APQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSPMFPQSSATGFGFQTPFTAPQSTPFPNAQ 120

Query: 124 LTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDI 183
           LTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+R KP GVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRTKPPGVSDI 180

Query: 184 MWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQ 243
           MWAEAM KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 244 RHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 303
           RHFLADTLPWVQRL+QKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRHLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 300

Query: 304 QLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 363
           QLKGSGAELSRRVQNLLT TRGQANGS  GNSIY QGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSRRVQNLLTVTRGQANGSGPGNSIYFQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 364 ARLGIVLKRDVRDMEIIMAEDKEMTDDAS 383
           ARLG VLKRDVRDMEIIMAEDKEM DDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of MC09g1862 vs. ExPASy TrEMBL
Match: A0A5A7SSX4 (Nuclear pore complex protein NUP54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002170 PE=4 SV=1)

HSP 1 Score: 655 bits (1690), Expect = 1.30e-235
Identity = 356/389 (91.52%), Postives = 365/389 (93.83%), Query Frame = 0


Query: 4   MFGAQPSSSAFGTPQSTPAFGTP---------SSTPAFGTPSASPAFGNLSSTPAFGTPS 63
           MFGAQ SSSAFGTPQSTPAFGTP         +STPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 64  TSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQ 123
           TS+F TGFGSSLFSTPFSSQPSQQ QQ QQS LF Q  ATGFGFQTPFAAPQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120

Query: 124 LTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDI 183
           LTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+RAKP GVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180

Query: 184 MWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQ 243
           MWAEAM KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 244 RHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 303
           RHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300

Query: 304 QLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 363
           QLKGSGAELS+RVQNLLT TRGQANGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 364 ARLGIVLKRDVRDMEIIMAEDKEMTDDAS 383
           ARLG VLKRDVRDMEIIMAEDKEM DDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of MC09g1862 vs. ExPASy TrEMBL
Match: A0A1S3BE47 (nuclear pore complex protein NUP54 OS=Cucumis melo OX=3656 GN=LOC103488894 PE=4 SV=1)

HSP 1 Score: 655 bits (1690), Expect = 1.30e-235
Identity = 356/389 (91.52%), Postives = 365/389 (93.83%), Query Frame = 0


Query: 4   MFGAQPSSSAFGTPQSTPAFGTP---------SSTPAFGTPSASPAFGNLSSTPAFGTPS 63
           MFGAQ SSSAFGTPQSTPAFGTP         +STPAFGTPSASPAFGNLSSTPAFGTPS
Sbjct: 1   MFGAQTSSSAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNLSSTPAFGTPS 60

Query: 64  TSTFGTGFGSSLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQ 123
           TS+F TGFGSSLFSTPFSSQPSQQ QQ QQS LF Q  ATGFGFQTPFAAPQSTPFPNAQ
Sbjct: 61  TSSFATGFGSSLFSTPFSSQPSQQQQQLQQSTLFPQSSATGFGFQTPFAAPQSTPFPNAQ 120

Query: 124 LTTQMAPVAPLPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDI 183
           LTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ+RAKP GVSDI
Sbjct: 121 LTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPPGVSDI 180

Query: 184 MWAEAMTKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQ 243
           MWAEAM KLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSD+ERLRMTQSNVKMLQ
Sbjct: 181 MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDSERLRMTQSNVKMLQ 240

Query: 244 RHFLADTLPWVQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR 303
           RHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Sbjct: 241 RHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVVKGEAELAEKLALITR 300

Query: 304 QLKGSGAELSRRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 363
           QLKGSGAELS+RVQNLLT TRGQANGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAI
Sbjct: 301 QLKGSGAELSKRVQNLLTITRGQANGSGPGNSIYLQGSAKIHEQSLADMQEVLQQQTEAI 360

Query: 364 ARLGIVLKRDVRDMEIIMAEDKEMTDDAS 383
           ARLG VLKRDVRDMEIIMAEDKEM DDAS
Sbjct: 361 ARLGNVLKRDVRDMEIIMAEDKEMADDAS 389

[Close]

BLAST of MC09g1862 vs. ExPASy TrEMBL
Match: A0A6J1G105 (nuclear pore complex protein NUP54 OS=Cucurbita moschata OX=3662 GN=LOC111449684 PE=4 SV=1)

HSP 1 Score: 639 bits (1649), Expect = 4.12e-229
Identity = 342/379 (90.24%), Postives = 357/379 (94.20%), Query Frame = 0


Query: 5   FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGTGFGS 64
           FG   S+ AFGTPQSTPAFGTP STPAFGTPSASPAFGN SSTPAFGTPS+S+F TGFGS
Sbjct: 29  FGTPQSTPAFGTPQSTPAFGTPQSTPAFGTPSASPAFGNFSSTPAFGTPSSSSFATGFGS 88

Query: 65  SLFSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPFPNAQLTTQMAPVAP 124
           SLFSTPFSSQPSQQ  QQQQSPLFQ P ATGFGFQTPFAAPQS+PFPNAQLTTQMAPVAP
Sbjct: 89  SLFSTPFSSQPSQQ--QQQQSPLFQLPAATGFGFQTPFAAPQSSPFPNAQLTTQMAPVAP 148

Query: 125 LPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKLE 184
           LPFSMADRDIQAIVEAYKD+AGNPKYAFK LLFSVTDPQ+RAKPAGVSDIMWAEAM KLE
Sbjct: 149 LPFSMADRDIQAIVEAYKDDAGNPKYAFKRLLFSVTDPQYRAKPAGVSDIMWAEAMAKLE 208

Query: 185 GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPW 244
           GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVK LQRHFLADTLPW
Sbjct: 209 GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKTLQRHFLADTLPW 268

Query: 245 VQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS 304
           +QRL+QKEQGLQRRLLR+MR+VEALESKGCRVP+M GEAELAE+LALITRQL+GSGAELS
Sbjct: 269 IQRLKQKEQGLQRRLLRMMRVVEALESKGCRVPIMTGEAELAERLALITRQLRGSGAELS 328

Query: 305 RRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKRD 364
           RRV+NLLT T GQANGS +GNSIYLQGS KIHEQSLADMQEVLQQQTEAIARLG VLKRD
Sbjct: 329 RRVKNLLTITCGQANGSGAGNSIYLQGSTKIHEQSLADMQEVLQQQTEAIARLGTVLKRD 388

Query: 365 VRDMEIIMAEDKEMTDDAS 383
           VRDMEIIMAEDKEM DD S
Sbjct: 389 VRDMEIIMAEDKEMIDDLS 405

[Close]

BLAST of MC09g1862 vs. TAIR 10
Match: AT1G24310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 2922 Blast hits to 2454 proteins in 263 species: Archae - 0; Bacteria - 57; Metazoa - 1043; Fungi - 654; Plants - 388; Viruses - 11; Other Eukaryotes - 769 (source: NCBI BLink). )

HSP 1 Score: 495.0 bits (1273), Expect = 5.5e-140
Identity = 269/378 (71.16%), Postives = 316/378 (83.60%), Query Frame = 0


Query: 14  FGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSTSTFGT-GFGSSLFSTPFS 73
           FGTP S+P+FGTPSSTPAFGT  +SPAFG  S+TPAFGTPS  +F + GFGSSLFS+PFS
Sbjct: 2   FGTPSSSPSFGTPSSTPAFGT--SSPAFGTPSATPAFGTPSNPSFSSGGFGSSLFSSPFS 61

Query: 74  SQPSQQPQQQQQ----SPLFQQPPATGFGFQTPF----AAPQSTPFPNAQLTTQMAPVAP 133
           SQ  QQ QQQQQ    S LFQQ P++ FGFQ+PF       Q TPFPNAQLTTQMAPVAP
Sbjct: 62  SQQPQQQQQQQQQQQPSSLFQQQPSSNFGFQSPFNNTAQQQQQTPFPNAQLTTQMAPVAP 121

Query: 134 LPFSMADRDIQAIVEAYKDEAGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMTKLE 193
           +P+S+ADRD+QAI+EAYK++  NPKYAF+HLLFSVT+PQ+R KPA VSDIMWAEAM+KLE
Sbjct: 122 IPYSLADRDVQAIIEAYKEDPTNPKYAFQHLLFSVTEPQYRVKPAAVSDIMWAEAMSKLE 181

Query: 194 GMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQSNVKMLQRHFLADTLPW 253
           GM+S +RERLWPQLVQGFKDLSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P 
Sbjct: 182 GMDSTERERLWPQLVQGFKDLSQRLKLQDEVLVSDRDRIKTTQSNVKMLQRHLQASTFPS 241

Query: 254 VQRLRQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS 313
           ++RLRQKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Sbjct: 242 IERLRQKEQSLQRRMLRVMRIIEGLEGKGFRLPLTKGEAELSEKLTAITRQVKGPGAELS 301

Query: 314 RRVQNLLTFTRGQANGSNSGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGIVLKRD 373
           RRVQ+L T +R QAN   +G+S+YL GS KI EQSL DMQEVLQQ+TEAI RLG VLKRD
Sbjct: 302 RRVQSLQTISRAQANSIAAGSSLYLPGSTKIDEQSLIDMQEVLQQETEAIGRLGNVLKRD 361

Query: 374 VRDMEIIMAEDKEMTDDA 383
           +RDMEI++AED EM  D+
Sbjct: 362 MRDMEIMVAEDTEMALDS 377

[Close]

BLAST of MC09g1862 vs. TAIR 10
Match: AT1G10390.1 (Nucleoporin autopeptidase )

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-05
Identity = 56/120 (46.67%), Postives = 65/120 (54.17%), Query Frame = 0


Query: 2   STMFGAQPSSSAFGTPQSTPAFGTP------SSTPAFGTPSASPAFGNLSSTPAFG-TPS 61
           S  F AQ  SS FG+  ST  FG P      +STP FG  S+SPAFGN  STPAFG +P+
Sbjct: 44  SAPFAAQSGSSIFGS-TSTGVFGAPQTSSPFASTPTFGA-SSSPAFGN--STPAFGASPA 103

Query: 62  TSTFG--TGFGSSL--FSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPF 111
           +S FG  +GFG     FSTP S+      QQ Q  P F     T FG  TPF A  +  F
Sbjct: 104 SSPFGGSSGFGQKPLGFSTPQSNPFGNSTQQSQ--PAFGN---TSFGSSTPFGATNTPAF 154

[Close]

BLAST of MC09g1862 vs. TAIR 10
Match: AT1G10390.2 (Nucleoporin autopeptidase )

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-05
Identity = 56/120 (46.67%), Postives = 65/120 (54.17%), Query Frame = 0


Query: 2   STMFGAQPSSSAFGTPQSTPAFGTP------SSTPAFGTPSASPAFGNLSSTPAFG-TPS 61
           S  F AQ  SS FG+  ST  FG P      +STP FG  S+SPAFGN  STPAFG +P+
Sbjct: 44  SAPFAAQSGSSIFGS-TSTGVFGAPQTSSPFASTPTFGA-SSSPAFGN--STPAFGASPA 103

Query: 62  TSTFG--TGFGSSL--FSTPFSSQPSQQPQQQQQSPLFQQPPATGFGFQTPFAAPQSTPF 111
           +S FG  +GFG     FSTP S+      QQ Q  P F     T FG  TPF A  +  F
Sbjct: 104 SSPFGGSSGFGQKPLGFSTPQSNPFGNSTQQSQ--PAFGN---TSFGSSTPFGATNTPAF 154

The following BLAST results are available for this feature:

BLAST of MC09g1862 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYF7	7.8e-139	71.16	Nuclear pore complex protein NUP54 OS=Arabidopsis thaliana OX=3702 GN=NUP54 PE=1...	[more]
Q9VDV3	4.9e-08	39.55	Nuclear pore complex protein Nup58 OS=Drosophila melanogaster OX=7227 GN=Nup58 P...	[more]
Q8BTS4	4.2e-07	25.49	Nuclear pore complex protein Nup54 OS=Mus musculus OX=10090 GN=Nup54 PE=1 SV=1	[more]
P70582	4.2e-07	25.49	Nuclear pore complex protein Nup54 OS=Rattus norvegicus OX=10116 GN=Nup54 PE=1 S...	[more]
Q7Z3B4	1.6e-06	25.00	Nucleoporin p54 OS=Homo sapiens OX=9606 GN=NUP54 PE=1 SV=2	[more]

BLAST of MC09g1862 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151739.1	7.70e-258	100.00	nuclear pore complex protein NUP54 [Momordica charantia]	[more]
XP_038893426.1	1.46e-239	92.29	nuclear pore complex protein NUP54 [Benincasa hispida]	[more]
XP_004135312.1	9.38e-236	91.26	nuclear pore complex protein NUP54 [Cucumis sativus] >KGN51680.1 hypothetical pr...	[more]
XP_008446043.1	2.69e-235	91.52	PREDICTED: nuclear pore complex protein NUP54 [Cucumis melo] >KAA0034202.1 nucle...	[more]
KAG6573649.1	2.65e-230	90.24	Nuclear pore complex protein NUP54, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of MC09g1862 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDY9	3.73e-258	100.00	nuclear pore complex protein NUP54 OS=Momordica charantia OX=3673 GN=LOC11101965...	[more]
A0A0A0KPW8	4.54e-236	91.26	Nup54 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589970 PE=4 ...	[more]
A0A5A7SSX4	1.30e-235	91.52	Nuclear pore complex protein NUP54 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BE47	1.30e-235	91.52	nuclear pore complex protein NUP54 OS=Cucumis melo OX=3656 GN=LOC103488894 PE=4 ...	[more]
A0A6J1G105	4.12e-229	90.24	nuclear pore complex protein NUP54 OS=Cucurbita moschata OX=3662 GN=LOC111449684...	[more]

BLAST of MC09g1862 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24310.1	5.5e-140	71.16	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G10390.1	1.1e-05	46.67	Nucleoporin autopeptidase	[more]
AT1G10390.2	1.1e-05	46.67	Nucleoporin autopeptidase	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 333..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	PANTHER	PTHR13000:SF0	NUCLEOPORIN P54	coord: 5..377
IPR025712	Nucleoporin Nup54, alpha-helical domain	PFAM	PF13874	Nup54	coord: 167..311 e-value: 3.7E-29 score: 101.6
IPR024864	Nucleoporin Nup54/Nup57/Nup44	PANTHER	PTHR13000	NUCLEOPORIN P54	coord: 5..377

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g1862.1	MC09g1862.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006607	NLS-bearing protein import into nucleus
biological_process	GO:0006999	nuclear pore organization
biological_process	GO:0036228	protein localization to nuclear inner membrane
cellular_component	GO:0044613	nuclear pore central transport channel
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0017056	structural constituent of nuclear pore