MC09g1720 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g1720
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic
Location	MC09: 22516205 .. 22522747 (+)
RNA-Seq Expression	MC09g1720
Synteny	MC09g1720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGGGATTTAAATTAAATGCAGCGCTCGAGGCAGCGGATCCTTTCCCCTGGACTGGAGTCCAAATCCCGTCAAATTATCCTCCCGTACTGTTTTTTTGATGTAATTATCATTTTTACTTCGCTTCGATGGAAGCGGGAATTTTCTTCTCCGTCGCTCCAATTCTATGGAGTCCCAATTTCAAGTGCGCTCTCTGTCCCGTTCGTCGCTCTTTCCCGCGTATCATAAGGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAGTTCACCGGGACGTTACAGAGGGCCGAAGCCCACAAGGGATTGGGTGGCCGATTGGGTCACCCAGAACGACGATGCTGTTCGGAGCTTGCCCATTTTCGTGGGAGGAATTTCTCTCTTGGTCGTCCTCTTCAATCGCGCCGTTTCTGGCATTGCTCCCGTCGCCGATGCCAGCAGGTTCAGTAGCGAAATTCAAACTAATTTTTTCATCACTGTTGTCTATTCCCACAATCGAACTATGTGTGCTTATTCTGGAATCTTATAAATGCATAGCTACGATGATCTGTAACTTAAGAGAAGAAATGAACAATTTTGTTGAGGTGGGGATGGAAATTCTGTATTCGATATTTTCCAATTTTGGCGGCACGATACTGCAACCAATACTCGATTTGAGCCGTGGCTCAATGTAATTAGCTGTTCTATTTGTGACAATAAACTATTATCAATTTTGGCAGTTCGCAGTCAAGAGCTGATCTGTTAACACTTGGACTTGCTGTTACGAATGTCTTGGCTGGTTTGGTGTGGCTGTCAATCAGGCCGAAATCTATAACGCCGGTGAGGGTTTTTTGTAAGATTTTCTTACTCAACATTTCCTCTCTCACTACAACGATCAGCTTGAGCGTTCCCTACTCTCTTTTGATATGTTTTTATTTTCCGTACCAGGTAAATACACAAGGTGTTGCATGTAAGAGGATGTGCTCCAGTCTCCCCGATCTTGTTACATTTGAGTTGTTATGGTAATACAATTTTCTGTATGATACTTCAAAATTGGGGATTTTGTTAAGCATTGGAGTTAGTTAAGATAATTGGGATCACTTTTCAGCATGCTTAAAATCAATCTTATCGGGTGATTATTCTGGTTTGGTATTGGAGAAAAATTGGCGAAACTTAAATTGTTTGCTTCAGATTTATGACCTTTTATTATTAGTTTCCCAGTGTTATCTTATAAATTTTATAATCCACATTCATTTTCTTTCCCCTCATTGTCACACGTTCATGGAAATGTACAGTGACAGAGAAAGCTGATTTCACTTGCTATCTATCGGTTAAATTACTTATAGTATTTGACGCTAAGGACAATTCTTAGAGGAAGAAAGAAAAATCCTGGACTAGCTGGTTAATGGTTACTTTTTGCTGCCTACTCTTAGGGTATGGGAGTCTCTGTCCGAAGTGACATGCTGCAGGTCTCTGGTTGTTGTTTATGATGGCATGTGTTTATTTCAAGTTGGTTTTGCTGCCGAATCAGTTGAGGGTGATGGCGAGGCCGAACATGTGGATGCTAGTGAATTGATGCAGGGATCGCTCTATCAAGGAATTCGCAAATCTCGAGCTCGTGAGTAGTAAATGACCTGCATATAGAGACCATCACACAATGTACTACTTGATTGCCGTGCAATTTGTTAATATCTGCAACTATTCCTTTTGAGAGTATCTTTCCTATTTTTATAGAGAGCTACTTGGCCAATCTCTCTCTTTATCCGGGGAAGTCAGAGCTGCCATTTCTCCCCTCAAATACTCAGGTACATTGCTTACTACAATTCAGGCTGTTGCTAGATTTGTTCCTTTTTATTTTTTCTTTGATTTTCTCAGTTGTATATAACTGGTAGTATGGTTTTCTACAGTTGCTTCATTCTTTTGTAGTGTCACTTTTATTTTACTATAGACATACAAACGTATAAACATATAAACTAATGAAGTCAAATTTCATTGGTCTATGTATGATTATTGTGGTTCAGAGTATAAATCATGCTCAAGTTTTAAGCATAATTTGGTGCATTTGAAAAATAATTTGGTTGTCAGCACACACGTAATTATCTAGCATTCTCACATATTCTCTTCAGAAACTTGGGAAGTACTTTTCCCTGCTTGCTGGCTAGATAGAGCCTCTTCTTTGTCTCCCTTGTTCTCTGAAACCAGACTCTGTTACTTTACATGACAAAATAGGTAATAATGTGACGGAAATTTTAATTTGTTTTGCAAATTTTTAGATTCTATCATTGAAATAAGATTAGTTCTTCACCTGTTTATTTTATGGGCTTCCATATTCAGTGGGTGGTGGCTAATTAAGCACATGAAAAGTTGGAACCTTTTTCGAGAATCTACCGTTTGTAGAAACTAATTGTGAATTGAGTCACTTATTCACAAGCCTGTGTTTTCGAAGGAGCTCAGGAAGAATAGTTTTAATTATTTAAGAAAATAAAATAAGTTATGAAAACGAAGTAATAAATTTAAAGAATAATAAATGATAAGAACAAAGTAAGGAAAATGGAAAATCTAAATCTGTTTTTACTAGTTTTTCGTTTTAGAAAAAAAAGAAGAGACAGTTCTAAACTCAACTTCCAGATAACACAAACAAACATAGCATCTCTCTCTGTCTCTCCTGCATGCTTGGATGGCCTTGTAAGAATTCCTATGAGCTACTTTCCCTCTGTAATGTCATTAGCGTACTTTACATCACATGTGTAGAGGGTAATCCAAATAATCCATATTTACGAACTTTGTACTAATTAATATCTACGAATAGATACAGAAAAACATGAATTTATTACTGTGTGTTTGTGCACACTGCATCATACTTTGTTAGATAGACAGATATTTGAAGTAAATTGTAACCGCTGAGTTCTAAGACAATTCTGCTATTCTAGGCGGTAATATTGCAACCACTTGGGGATAAGGGTATTGCTGTCATTGGTGGAAACACTATTAGGGGTTTCACAACCTCTGATCAGGTACTCGTCCTTAAAGCCTCTTCTTCTTAATGGGTCTTTTGTCAATATTTGTGGATCTTTTTCCAAATGTTACTTTTGTCAATATTGGGCTCGGATATCGTTCTATCCGTACTTCAGTTTGAATTAAATGAAATGCACGTTCTACCTATCCGTTTGCCTAAGGCTCCGAGTTCTCATCCGATGCATGAAGTTTCAACTCCTCTACCTAGCTGTTCTCAACCCCCCCTCCCCAAAGGGATGTAATTGATGTTGTGGTAGCTTGCTTCAATTTCACATAAATACATATTATCTGCATATTGACGTGTGATAACATTTTTCCTTTTAGAAGTATTTTATTCTCTATGGCATAATTACAATTTCCTGCTTAAAAACTGAAATGTTCACAGGCATGGATTTCACTAGTTGGAGAGAAGCTGGATGCTACTCTGTCAAAATATTCGAACAATTTCCAACCAGCGGTAAAATTGAGTTCAGAGGGGAATTGAACTATTGATGGGCAAACAAGACACGGTTATTTGGTTATTTATTTTATTTATTTCCAATGTTTTCAAATCATTGGGCAGGTAGAGAAATAATGTTGAAGGCCCTGGAAAAGCAGACAAAGCAACTCAACTATGTAGTTCATTTCTATGTCTAGTTGATCGAATCATAAATACAAAAGCTTCTCTTTCAGATTCACTGATTGGTGGTAACGTTTGGTTCATTATTCTTTATGCATTTTCTGCACCTGGGGTAATGCCGAGTGCATTACTTGATGTGTGACATAGCAGACAGCAGATGATTAAATCAAATTTGAAGTATGAATCAGAAAGAATTTCATTCCAAAATATGAGATGTGAGTAAAAAACCTGTAACTAAACCGTAGCATGTCCATGGAGTAAAAATTAAAAAAAAAAAAATCAGATAAACATTCTTTTTGTAGAAAAAATCAGTTGCTTGCCGTATGATTACTGTGTACAGGTCACTAAGCTGCAGGCTGGCTGCCAAGAGTTGTTAAGTAGAAGCTTTCTCCCATGGTAGGAACCCTGTCAAAGGATCAGAGAACAAAATTTGGATAAAATCTCTTAGTCCAGTGTCCCAAACTTCACAGAACTGCAACCTCCAATTGGATGGTTCAATAGCCTCTGTCCCAAGCCCGGGTGCTCTATCCTTCGACCCTTCATTCTGTGCCTCATGCCAATCGACAACGTAGGTAGCTACTCTTCTGAAAAATTTTGCTCGAAAAGTTTCCCACGCTTGGTATTTGTAATGGTTTATCACGGCATTGCTTTTTGATACGTCAAAGAACCCAAATCCTTGTTTCAGTTGAAAGTGGTGAACGACATTGAGAAGTGTCATGTCAAGCAAGTCTGGCCGGATGAACGATTTGTGTCTCTCGGGACTCTGGAGCCGGCAAGTGTACCCCATTGTTACTCCCTGTGGTGGATGTGATGTTAGACCCGATGGTCCGAAGCTGTGGCATGCAGTTCGAATCTCTGCAATGGTTGTTGAATTGGAAGTTGAAGAAGATGAATCGGCAATGAGAGAATGAAGGGCATTGCGGCCAGCAGTTAGGTATTCTCGCTGGTGGCGATACTTTGAAGGGAAGTAGAAAAACTCGTCAACATCAAAGAAACCAACCCACTTACATTCATCTCTAGCTCTCAAAGCACAGTGTGAGAAACCTGCTTCTTGGGTTTTAATCCATGGCCAGGTCAGCCTACTGATATTGTAGTCTTCCAGGTTGAGCTCTTGAATGACTTCTTCAATGCCATCATCACTATTGTTGTCGTAGATGAACCAGCGCCCGACTCCAAGCCAGGCATGGTACATAATCCATTCACGAAGTGCAGCCGCTTGGTTCCACACCATTGTGCACACACAAAGCTCATGTTTTTCCTGTTTTCTTTGCAGCTTATTCAGCTTGGAGTTGAAGAGTCTGGCCACCGAGGGCAGAGTCACCTGAAGATGGGTTTTAGTATTGACGCTGCCGCGGCTAACAGTAACTCGAATTCCCTTTTCCTTGTCTAAACTGCTCACCACACCAGCCGGTAAGGGGCACCTGATAATTTCTTGAGCTGCAGTTACTGCTTTTGTGGTAAGCACGTATTCTCCATTATCTTTGGAATTTCCCAGTTTAAAGTGGCAGTTGAATTCCGTCGGATTCGATTCCTTGTGTGGTCGGAGATTTAGTCCCTTGGCAAACACTATCACCGTATCGCCGTCAATAGCTGCCTCATAAACCAGCCTCTCCCACGACGCAATTGGCTGTCTGTTCCTGACCAACCAATGATCATCAACTCCCTCGCTGCCCCTTCTCAAGTCAACGGCGGAGGCCGAGTAATTCCGTGGCGGTAGTGGACATCTAGCAATCGATCGGAATTCATCGTACCTATCCGTGGATAGAACTGACTGTTTGAGAATCTCTTGGTTGAAACTTCTAGAGACTGATTTGCCGTATGAGCAATCTAATTTGTCATCTCGGCGGAGTTCGCCGGTGACAATCAAAAGCAAGTGGTCGGGAAAGAGGACACGACTTTCAATTCTGAGAGGCGAGTACTTGCTGCTGAGAGAATTGTCAAGTGTGGACTTGCTGACAGAGGTGGACAAGCGGGAGAGCGTGGTGGAGGAGGCATCGAGAACTGGGCGGAACGATGCGGCGGCAATGGAGAACCACCTACTCGAGGAGAGAAACAAGAGGAAAGCGAAAAAGGAAAGGCAAAGAAACAGAGATCTCCGAGTAAAGAAGTGGACGTGGGAGCTGGACCTGCCAAAACGCTTCCTTTTCCGGCGCTGCTGCTCCCAATCCATTAATCCAAAATTCACCCTTTCACAGAGAGTTCAGTTCACACCGGTGCAGATCCGGTGAGATGAAAGCAGAAGCGATTTCGTGGAGTTGGGGTTTTTCCGATAACCTGTCCGCAGCCTGCAATTACTGGGAAACGTAGTTTTATTAGTTAAAAAAAAAAAAAAAAGATTCGGCAGTGATGATGATGACGAAGGTGCTTGATTGTTTGCTGCTGAGAGGAATGAGGACTTTTATTGACAAATGCGGAGGCGTGAACATCACTCTCTCTCTCTTGTCCTGCTGCCAGACCAGACCAGACCGGACCATCGATTTTTCTTTAAAAATAAAGGAAAAAAAATTGAAATTTGAAGCTAGAAAAATACTTGCTTTTTGTATTTAAATTGGGCCATAGCATACCACACCACATGCCGGCTTTTTTGCCTTTTTTTCTCTCGCAAACCCTTTTTGTCAAACGAGTAGTGTTTTTGTTCTGGAGAGTAATTGATTAGCTGGAAAATAGACTTTTCCTCCTACTCACAGACTAGACTGTTTTTTTAGGTTTAGCTCGTTAAATTTAATGTTGAGAAATTGTTGAGGTGATTTTTTAAAACCCAATTTGCTTTGTTTATTGACCCATTACTCGGAACCTTCGGAAGAAATAAACAAACCAGATGCTCTGCCTCTCTATGCGGCAGATTTGTATTAAGAAATTTGTTAATGATTTATGACTGGGTTTTGGAATCTTAATTCAATACTATGGAGACCTCTGCCAAATTTA

mRNA sequence

CTGGGATTTAAATTAAATGCAGCGCTCGAGGCAGCGGATCCTTTCCCCTGGACTGGAGTCCAAATCCCGTCAAATTATCCTCCCGTACTGTTTTTTTGATGTAATTATCATTTTTACTTCGCTTCGATGGAAGCGGGAATTTTCTTCTCCGTCGCTCCAATTCTATGGAGTCCCAATTTCAAGTGCGCTCTCTGTCCCGTTCGTCGCTCTTTCCCGCGTATCATAAGGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAGTTCACCGGGACGTTACAGAGGGCCGAAGCCCACAAGGGATTGGGTGGCCGATTGGGTCACCCAGAACGACGATGCTGTTCGGAGCTTGCCCATTTTCGTGGGAGGAATTTCTCTCTTGGTCGTCCTCTTCAATCGCGCCGTTTCTGGCATTGCTCCCGTCGCCGATGCCAGCAGTTCGCAGTCAAGAGCTGATCTGTTAACACTTGGACTTGCTGTTACGAATGTCTTGGCTGGTTTGGTGTGGCTGTCAATCAGGCCGAAATCTATAACGCCGGTAAATACACAAGGTGTTGCATGTAAGAGGATGTGCTCCAGTCTCCCCGATCTTGTTACATTTGAGTTGTTATGGGTATGGGAGTCTCTGTCCGAAGTGACATGCTGCAGGTCTCTGGTTGTTGTTTATGATGGCATGTGTTTATTTCAAGTTGGTTTTGCTGCCGAATCAGTTGAGGGTGATGGCGAGGCCGAACATGTGGATGCTAGTGAATTGATGCAGGGATCGCTCTATCAAGGAATTCGCAAATCTCGAGCTCAGAGCTACTTGGCCAATCTCTCTCTTTATCCGGGGAAGTCAGAGCTGCCATTTCTCCCCTCAAATACTCAGGCGGTAATATTGCAACCACTTGGGGATAAGGGTATTGCTGTCATTGGTGGAAACACTATTAGGGGTTTCACAACCTCTGATCAGGCATGGATTTCACTAGTTGGAGAGAAGCTGGATGCTACTCTGTCAAAATATTCGAACAATTTCCAACCAGCGGTAGAGAAATAATGTTGAAGGCCCTGGAAAAGCAGACAAAGCAACTCAACTATGTAGTTCATTTCTATGTCTAGTTGATCGAATCATAAATACAAAAGCTTCTCTTTCAGATTCACTGATTGGTGGTAACGTTTGGTTCATTATTCTTTATGCATTTTCTGCACCTGGGGTAATGCCGAGTGCATTACTTGATGTGTGACATAGCAGACAGCAGATGATTAAATCAAATTTGAAGTATGAATCAGAAAGAATTTCATTCCAAAATATGAGATGTGAGTAAAAAACCTGTAACTAAACCGTAGCATGTCCATGGAGTAAAAATTAAAAAAAAAAAAATCAGATAAACATTCTTTTTGTAGAAAAAATCAGTTGCTTGCCGTATGATTACTGTGTACAGGTCACTAAGCTGCAGGCTGGCTGCCAAGAGTTGTTAAGTAGAAGCTTTCTCCCATGGTAGGAACCCTGTCAAAGGATCAGAGAACAAAATTTGGATAAAATCTCTTAGTCCAGTGTCCCAAACTTCACAGAACTGCAACCTCCAATTGGATGGTTCAATAGCCTCTGTCCCAAGCCCGGGTGCTCTATCCTTCGACCCTTCATTCTGTGCCTCATGCCAATCGACAACTTGAAAGTGGTGAACGACATTGAGAAGTGTCATGTCAAGCAAGTCTGGCCGGATGAACGATTTGTGTCTCTCGGGACTCTGGAGCCGGCAAGTGTACCCCATTGTTACTCCCTGTGGTGGATGTGATGTTAGACCCGATGGTCCGAAGCTGTGGCATGCAGTTCGAATCTCTGCAATGGTTGTTGAATTGGAAGTTGAAGAAGATGAATCGGCAATGAGAGAATGAAGGGCATTGCGGCCAGCAGTTAGGTATTCTCGCTGGTGGCGATACTTTGAAGGGAAGTAGAAAAACTCGTCAACATCAAAGAAACCAACCCACTTACATTCATCTCTAGCTCTCAAAGCACAGTGTGAGAAACCTGCTTCTTGGGTTTTAATCCATGGCCAGGTCAGCCTACTGATATTGTAGTCTTCCAGGTTGAGCTCTTGAATGACTTCTTCAATGCCATCATCACTATTGTTGTCGTAGATGAACCAGCGCCCGACTCCAAGCCAGGCATGCTTATTCAGCTTGGAGTTGAAGAGTCTGGCCACCGAGGGCAGAGTCACCTGAAGATGGGTTTTAGTATTGACGCTGCCGCGGCTAACAGTAACTCGAATTCCCTTTTCCTTGTCTAAACTGCTCACCACACCAGCCGGTAAGGGGCACCTGATAATTTCTTGAGCTGCAGTTACTGCTTTTGTGGTAAGCACGTATTCTCCATTATCTTTGGAATTTCCCAGTTTAAAGTGGCAGTTGAATTCCGTCGGATTCGATTCCTTGTGTGGTCGGAGATTTAGTCCCTTGGCAAACACTATCACCGTATCGCCGTCAATAGCTGCCTCATAAACCAGCCTCTCCCACGACGCAATTGGCTGTCTGTTCCTGACCAACCAATGATCATCAACTCCCTCGCTGCCCCTTCTCAAGTCAACGGCGGAGGCCGAGTAATTCCGTGGCGGTAGTGGACATCTAGCAATCGATCGGAATTCATCGTACCTATCCGTGGATAGAACTGACTGTTTGAGAATCTCTTGGTTGAAACTTCTAGAGACTGATTTGCCGTATGAGCAATCTAATTTGTCATCTCGGCGGAGTTCGCCGGTGACAATCAAAAGCAAGTGGTCGGGAAAGAGGACACGACTTTCAATTCTGAGAGGCGAGTACTTGCTGCTGAGAGAATTGTCAAGTGTGGACTTGCTGACAGAGGTGGACAAGCGGGAGAGCGTGGTGGAGGAGGCATCGAGAACTGGGCGGAACGATGCGGCGGCAATGGAGAACCACCTACTCGAGGAGAGAAACAAGAGGAAAGCGAAAAAGGAAAGGCAAAGAAACAGAGATCTCCGAGTAAAGAAGTGGACGTGGGAGCTGGACCTGCCAAAACGCTTCCTTTTCCGGCGCTGCTGCTCCCAATCCATTAATCCAAAATTCACCCTTTCACAGAGAGTTCAGTTCACACCGGTGCAGATCCGGTGAGATGAAAGCAGAAGCGATTTCGTGGAGTTGGGGTTTTTCCGATAACCTGTCCGCAGCCTGCAATTACTGGGAAACGTAGTTTTATTAGTTAAAAAAAAAAAAAAAAGATTCGGCAGTGATGATGATGACGAAGGTGCTTGATTGTTTGCTGCTGAGAGGAATGAGGACTTTTATTGACAAATGCGGAGGCGTGAACATCACTCTCTCTCTCTTGTCCTGCTGCCAGACCAGACCAGACCGGACCATCGATTTTTCTTTAAAAATAAAGGAAAAAAAATTGAAATTTGAAGCTAGAAAAATACTTGCTTTTTGTATTTAAATTGGGCCATAGCATACCACACCACATGCCGGCTTTTTTGCCTTTTTTTCTCTCGCAAACCCTTTTTGTCAAACGAGTAGTGTTTTTGTTCTGGAGAGTAATTGATTAGCTGGAAAATAGACTTTTCCTCCTACTCACAGACTAGACTGTTTTTTTAGGTTTAGCTCGTTAAATTTAATGTTGAGAAATTGTTGAGGTGATTTTTTAAAACCCAATTTGCTTTGTTTATTGACCCATTACTCGGAACCTTCGGAAGAAATAAACAAACCAGATGCTCTGCCTCTCTATGCGGCAGATTTGTATTAAGAAATTTGTTAATGATTTATGACTGGGTTTTGGAATCTTAATTCAATACTATGGAGACCTCTGCCAAATTTA

Coding sequence (CDS)

ATGGAAGCGGGAATTTTCTTCTCCGTCGCTCCAATTCTATGGAGTCCCAATTTCAAGTGCGCTCTCTGTCCCGTTCGTCGCTCTTTCCCGCGTATCATAAGGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAGTTCACCGGGACGTTACAGAGGGCCGAAGCCCACAAGGGATTGGGTGGCCGATTGGGTCACCCAGAACGACGATGCTGTTCGGAGCTTGCCCATTTTCGTGGGAGGAATTTCTCTCTTGGTCGTCCTCTTCAATCGCGCCGTTTCTGGCATTGCTCCCGTCGCCGATGCCAGCAGTTCGCAGTCAAGAGCTGATCTGTTAACACTTGGACTTGCTGTTACGAATGTCTTGGCTGGTTTGGTGTGGCTGTCAATCAGGCCGAAATCTATAACGCCGGTAAATACACAAGGTGTTGCATGTAAGAGGATGTGCTCCAGTCTCCCCGATCTTGTTACATTTGAGTTGTTATGGGTATGGGAGTCTCTGTCCGAAGTGACATGCTGCAGGTCTCTGGTTGTTGTTTATGATGGCATGTGTTTATTTCAAGTTGGTTTTGCTGCCGAATCAGTTGAGGGTGATGGCGAGGCCGAACATGTGGATGCTAGTGAATTGATGCAGGGATCGCTCTATCAAGGAATTCGCAAATCTCGAGCTCAGAGCTACTTGGCCAATCTCTCTCTTTATCCGGGGAAGTCAGAGCTGCCATTTCTCCCCTCAAATACTCAGGCGGTAATATTGCAACCACTTGGGGATAAGGGTATTGCTGTCATTGGTGGAAACACTATTAGGGGTTTCACAACCTCTGATCAGGCATGGATTTCACTAGTTGGAGAGAAGCTGGATGCTACTCTGTCAAAATATTCGAACAATTTCCAACCAGCGGTAGAGAAATAA

Protein sequence

MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPTRDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLVVVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQPAVEK

Homology

[Close]

BLAST of MC09g1720 vs. ExPASy Swiss-Prot
Match: Q6NQK9 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCB4 PE=1 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 3.6e-102
Identity = 199/295 (67.46%), Postives = 230/295 (77.97%), Query Frame = 0


Query: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60
           MEA I      I WS N + +  P+   FPR IRA       SSSS+S  P  Y GPKP 
Sbjct: 1   MEARIILLRIQIPWSANRQFSHPPL--DFPRFIRA-------SSSSTSQKPKTYEGPKPR 60

Query: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120
           ++ VAD++++NDD VRSLPI+VGG SLL VLFNR VSGIAPVADASSSQSRADLL LGLA
Sbjct: 61  KNLVADFISKNDDLVRSLPIYVGGASLLAVLFNRTVSGIAPVADASSSQSRADLLALGLA 120

Query: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180
           VTN+L GLVWLSIRPKSITPVN +GV CK + S LP  +  ELLW WESL   TCC+SLV
Sbjct: 121 VTNLLTGLVWLSIRPKSITPVNPKGVECKVVESDLPASMVSELLWAWESLKVATCCKSLV 180

Query: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240
           +VY+G+CL Q+G  AES E D +   V   +LMQGS+Y+G+ KS+AQSYLANLSLYPG+S
Sbjct: 181 IVYNGICLIQIGMVAESPE-DKKTVIVKTDKLMQGSVYRGVMKSKAQSYLANLSLYPGRS 240

Query: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKY 296
           ELPFLP+NTQAVILQPLGDKGIAVIGGNTIRGFT+SDQAWIS +GEKLDATL +Y
Sbjct: 241 ELPFLPANTQAVILQPLGDKGIAVIGGNTIRGFTSSDQAWISSIGEKLDATLGRY 285

[Close]

BLAST of MC09g1720 vs. NCBI nr
Match: XP_022151123.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 601 bits (1550), Expect = 1.11e-216
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60
           MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT
Sbjct: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60

Query: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120
           RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA
Sbjct: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120

Query: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180
           VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV
Sbjct: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180

Query: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240
           VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS
Sbjct: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240

Query: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300
           ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ
Sbjct: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300

Query: 301 PAVEK 305
           PAVEK
Sbjct: 301 PAVEK 305

[Close]

BLAST of MC09g1720 vs. NCBI nr
Match: XP_022151122.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 598 bits (1541), Expect = 3.16e-215
Identity = 303/304 (99.67%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60
           MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT
Sbjct: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60

Query: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120
           RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA
Sbjct: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120

Query: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180
           VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV
Sbjct: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180

Query: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240
           VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS
Sbjct: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240

Query: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300
           ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ
Sbjct: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300

Query: 301 PAVE 304
           PAV+
Sbjct: 301 PAVK 304

[Close]

BLAST of MC09g1720 vs. NCBI nr
Match: XP_022984820.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 512 bits (1318), Expect = 2.10e-181
Identity = 257/304 (84.54%), Postives = 277/304 (91.12%), Query Frame = 0


Query: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60
           MEAGIFF V PILWS + KC LCPVRRSFPRIIRASS +S +S          YRGPKP+
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQAS----------YRGPKPS 60

Query: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120
           RDWVA+WV++N+DAVRSLPI+VGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA
Sbjct: 61  RDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120

Query: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180
           VTNVL GLVWLSIRPKSITPVN QGV C+R+CSSLPDLVT ELLWVW+SLSEVTCCRSLV
Sbjct: 121 VTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLV 180

Query: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240
           VVYDGMC+FQVGFAAES EGDGEAEHV+AS+LMQG LY+GI KS+AQSYLANLSLYPGKS
Sbjct: 181 VVYDGMCIFQVGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKS 240

Query: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300
           ELPFLPSNTQAVILQPLG+KGIA+IGGNTIRGFTTSDQAWISLVGEKLDATL KYSNN Q
Sbjct: 241 ELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQ 294

Query: 301 PAVE 304
           PA +
Sbjct: 301 PAAK 294

[Close]

BLAST of MC09g1720 vs. NCBI nr
Match: XP_022956789.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita moschata] >KAG6601389.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 512 bits (1318), Expect = 2.10e-181
Identity = 257/304 (84.54%), Postives = 277/304 (91.12%), Query Frame = 0


Query: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60
           MEAGIFF V PILWS + KC LCPVRRSFPRIIRASS +S +S          YRGPKP+
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQAS----------YRGPKPS 60

Query: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120
            DWVA+WV++N+DAVRSLPI+VGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA
Sbjct: 61  TDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120

Query: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180
           VTNVL GLVWLSIRPKSITPVN QGV C+R+CSSLPDLVT ELLWVW+SLSEVTCCRSLV
Sbjct: 121 VTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLV 180

Query: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240
           VVYDGMC+FQVGFAAES EGDGEAEHV+AS+LMQGSLY+GI KS+AQSYLANLSLYPGKS
Sbjct: 181 VVYDGMCIFQVGFAAESAEGDGEAEHVEASKLMQGSLYKGILKSQAQSYLANLSLYPGKS 240

Query: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300
           ELPFLPSNTQAVILQPLG+KGIA+IGGNTIRGFTTSDQAWISLVGEKLDATL KYSNN Q
Sbjct: 241 ELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQ 294

Query: 301 PAVE 304
           PA +
Sbjct: 301 PAAK 294

[Close]

BLAST of MC09g1720 vs. NCBI nr
Match: XP_023513804.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 507 bits (1305), Expect = 2.01e-179
Identity = 253/304 (83.22%), Postives = 275/304 (90.46%), Query Frame = 0


Query: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60
           MEAGIFF V PILWS + KC LCPVRRSFPRIIRASS +S +S          YRGPKP+
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQAS----------YRGPKPS 60

Query: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120
            DWVA+WV++N+DAVRSLPI+VGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA
Sbjct: 61  TDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120

Query: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180
           VTNVL GLVWLSIRPKSITPVN QGV C+R+CSSLPDLVT ELLWVW+SLSEVTCCRSLV
Sbjct: 121 VTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLV 180

Query: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240
           +VYDGMC+FQVGFAAES EGDG+ EHV+A +LMQGSLY+GI KS+AQSYLANLSLYPGKS
Sbjct: 181 IVYDGMCIFQVGFAAESAEGDGDGEHVEACKLMQGSLYKGILKSQAQSYLANLSLYPGKS 240

Query: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300
           ELPFLPSNTQAVILQPLG+KGIA+IGGNTIRGFTTSDQAWISLVGEKLDATL KYSNN Q
Sbjct: 241 ELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQ 294

Query: 301 PAVE 304
           PA +
Sbjct: 301 PAAK 294

[Close]

BLAST of MC09g1720 vs. ExPASy TrEMBL
Match: A0A6J1DBC0 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019127 PE=4 SV=1)

HSP 1 Score: 601 bits (1550), Expect = 5.39e-217
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60
           MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT
Sbjct: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60

Query: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120
           RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA
Sbjct: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120

Query: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180
           VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV
Sbjct: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180

Query: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240
           VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS
Sbjct: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240

Query: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300
           ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ
Sbjct: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300

Query: 301 PAVEK 305
           PAVEK
Sbjct: 301 PAVEK 305

[Close]

BLAST of MC09g1720 vs. ExPASy TrEMBL
Match: A0A6J1DCN6 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019127 PE=4 SV=1)

HSP 1 Score: 598 bits (1541), Expect = 1.53e-215
Identity = 303/304 (99.67%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60
           MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT
Sbjct: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60

Query: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120
           RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA
Sbjct: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120

Query: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180
           VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV
Sbjct: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180

Query: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240
           VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS
Sbjct: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240

Query: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300
           ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ
Sbjct: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300

Query: 301 PAVE 304
           PAV+
Sbjct: 301 PAVK 304

[Close]

BLAST of MC09g1720 vs. ExPASy TrEMBL
Match: A0A6J1J9M5 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482990 PE=4 SV=1)

HSP 1 Score: 512 bits (1318), Expect = 1.02e-181
Identity = 257/304 (84.54%), Postives = 277/304 (91.12%), Query Frame = 0


Query: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60
           MEAGIFF V PILWS + KC LCPVRRSFPRIIRASS +S +S          YRGPKP+
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQAS----------YRGPKPS 60

Query: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120
           RDWVA+WV++N+DAVRSLPI+VGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA
Sbjct: 61  RDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120

Query: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180
           VTNVL GLVWLSIRPKSITPVN QGV C+R+CSSLPDLVT ELLWVW+SLSEVTCCRSLV
Sbjct: 121 VTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLV 180

Query: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240
           VVYDGMC+FQVGFAAES EGDGEAEHV+AS+LMQG LY+GI KS+AQSYLANLSLYPGKS
Sbjct: 181 VVYDGMCIFQVGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKS 240

Query: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300
           ELPFLPSNTQAVILQPLG+KGIA+IGGNTIRGFTTSDQAWISLVGEKLDATL KYSNN Q
Sbjct: 241 ELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQ 294

Query: 301 PAVE 304
           PA +
Sbjct: 301 PAAK 294

[Close]

BLAST of MC09g1720 vs. ExPASy TrEMBL
Match: A0A6J1H029 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458387 PE=4 SV=1)

HSP 1 Score: 512 bits (1318), Expect = 1.02e-181
Identity = 257/304 (84.54%), Postives = 277/304 (91.12%), Query Frame = 0


Query: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60
           MEAGIFF V PILWS + KC LCPVRRSFPRIIRASS +S +S          YRGPKP+
Sbjct: 1   MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQAS----------YRGPKPS 60

Query: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120
            DWVA+WV++N+DAVRSLPI+VGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA
Sbjct: 61  TDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120

Query: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180
           VTNVL GLVWLSIRPKSITPVN QGV C+R+CSSLPDLVT ELLWVW+SLSEVTCCRSLV
Sbjct: 121 VTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLV 180

Query: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240
           VVYDGMC+FQVGFAAES EGDGEAEHV+AS+LMQGSLY+GI KS+AQSYLANLSLYPGKS
Sbjct: 181 VVYDGMCIFQVGFAAESAEGDGEAEHVEASKLMQGSLYKGILKSQAQSYLANLSLYPGKS 240

Query: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300
           ELPFLPSNTQAVILQPLG+KGIA+IGGNTIRGFTTSDQAWISLVGEKLDATL KYSNN Q
Sbjct: 241 ELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQ 294

Query: 301 PAVE 304
           PA +
Sbjct: 301 PAAK 294

[Close]

BLAST of MC09g1720 vs. ExPASy TrEMBL
Match: A0A0A0KQF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603980 PE=4 SV=1)

HSP 1 Score: 470 bits (1210), Expect = 2.86e-165
Identity = 241/304 (79.28%), Postives = 264/304 (86.84%), Query Frame = 0


Query: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60
           MEAGIFF +  I W+ NFK     +R SFP I+RASSS+S  S          YRGPKP+
Sbjct: 1   MEAGIFFPLTSIPWTFNFKRTHSSLRPSFPLIVRASSSTSQRS----------YRGPKPS 60

Query: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120
            + VADWV+ NDD VRSLPI+VGGISLL+VLFNRAVSGIAPVADASSSQSRADLLTLGLA
Sbjct: 61  TNLVADWVSNNDDTVRSLPIYVGGISLLIVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120

Query: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180
           VTNVLAGLVWLSIRPKSITPVN  GV  +R+CSSLPD VT ELLWVW+SLSEVTCCRSLV
Sbjct: 121 VTNVLAGLVWLSIRPKSITPVNPLGVENERICSSLPDRVTSELLWVWKSLSEVTCCRSLV 180

Query: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240
           VVYDG C+FQVGFAAES EG+GEAEHV+A +LMQGSLY+G+ KS+AQSYLANLSLYPGKS
Sbjct: 181 VVYDGTCIFQVGFAAESAEGNGEAEHVEAGKLMQGSLYKGVLKSQAQSYLANLSLYPGKS 240

Query: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKYSNNFQ 300
           ELPFLPSNTQAVILQPLG+KGIA+IGGNTIRGFTTSDQAWIS VGEKLDATLSKYSNNFQ
Sbjct: 241 ELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISFVGEKLDATLSKYSNNFQ 294

Query: 301 PAVE 304
           PA +
Sbjct: 301 PAAK 294

[Close]

BLAST of MC09g1720 vs. TAIR 10
Match: AT1G59840.1 (cofactor assembly of complex C )

HSP 1 Score: 372.9 bits (956), Expect = 2.5e-103
Identity = 199/295 (67.46%), Postives = 230/295 (77.97%), Query Frame = 0


Query: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60
           MEA I      I WS N + +  P+   FPR IRA       SSSS+S  P  Y GPKP 
Sbjct: 1   MEARIILLRIQIPWSANRQFSHPPL--DFPRFIRA-------SSSSTSQKPKTYEGPKPR 60

Query: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120
           ++ VAD++++NDD VRSLPI+VGG SLL VLFNR VSGIAPVADASSSQSRADLL LGLA
Sbjct: 61  KNLVADFISKNDDLVRSLPIYVGGASLLAVLFNRTVSGIAPVADASSSQSRADLLALGLA 120

Query: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180
           VTN+L GLVWLSIRPKSITPVN +GV CK + S LP  +  ELLW WESL   TCC+SLV
Sbjct: 121 VTNLLTGLVWLSIRPKSITPVNPKGVECKVVESDLPASMVSELLWAWESLKVATCCKSLV 180

Query: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240
           +VY+G+CL Q+G  AES E D +   V   +LMQGS+Y+G+ KS+AQSYLANLSLYPG+S
Sbjct: 181 IVYNGICLIQIGMVAESPE-DKKTVIVKTDKLMQGSVYRGVMKSKAQSYLANLSLYPGRS 240

Query: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKY 296
           ELPFLP+NTQAVILQPLGDKGIAVIGGNTIRGFT+SDQAWIS +GEKLDATL +Y
Sbjct: 241 ELPFLPANTQAVILQPLGDKGIAVIGGNTIRGFTSSDQAWISSIGEKLDATLGRY 285

[Close]

BLAST of MC09g1720 vs. TAIR 10
Match: AT1G59840.2 (cofactor assembly of complex C )

HSP 1 Score: 372.9 bits (956), Expect = 2.5e-103
Identity = 199/295 (67.46%), Postives = 230/295 (77.97%), Query Frame = 0


Query: 1   MEAGIFFSVAPILWSPNFKCALCPVRRSFPRIIRASSSSSSSSSSSSSSSPGRYRGPKPT 60
           MEA I      I WS N + +  P+   FPR IRA       SSSS+S  P  Y GPKP 
Sbjct: 1   MEARIILLRIQIPWSANRQFSHPPL--DFPRFIRA-------SSSSTSQKPKTYEGPKPR 60

Query: 61  RDWVADWVTQNDDAVRSLPIFVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA 120
           ++ VAD++++NDD VRSLPI+VGG SLL VLFNR VSGIAPVADASSSQSRADLL LGLA
Sbjct: 61  KNLVADFISKNDDLVRSLPIYVGGASLLAVLFNRTVSGIAPVADASSSQSRADLLALGLA 120

Query: 121 VTNVLAGLVWLSIRPKSITPVNTQGVACKRMCSSLPDLVTFELLWVWESLSEVTCCRSLV 180
           VTN+L GLVWLSIRPKSITPVN +GV CK + S LP  +  ELLW WESL   TCC+SLV
Sbjct: 121 VTNLLTGLVWLSIRPKSITPVNPKGVECKVVESDLPASMVSELLWAWESLKVATCCKSLV 180

Query: 181 VVYDGMCLFQVGFAAESVEGDGEAEHVDASELMQGSLYQGIRKSRAQSYLANLSLYPGKS 240
           +VY+G+CL Q+G  AES E D +   V   +LMQGS+Y+G+ KS+AQSYLANLSLYPG+S
Sbjct: 181 IVYNGICLIQIGMVAESPE-DKKTVIVKTDKLMQGSVYRGVMKSKAQSYLANLSLYPGRS 240

Query: 241 ELPFLPSNTQAVILQPLGDKGIAVIGGNTIRGFTTSDQAWISLVGEKLDATLSKY 296
           ELPFLP+NTQAVILQPLGDKGIAVIGGNTIRGFT+SDQAWIS +GEKLDATL +Y
Sbjct: 241 ELPFLPANTQAVILQPLGDKGIAVIGGNTIRGFTSSDQAWISSIGEKLDATLGRY 285

The following BLAST results are available for this feature:

BLAST of MC09g1720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQK9	3.6e-102	67.46	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Arabidop...	[more]

BLAST of MC09g1720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151123.1	1.11e-216	100.00	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X2 ...	[more]
XP_022151122.1	3.16e-215	99.67	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 ...	[more]
XP_022984820.1	2.10e-181	84.54	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita ...	[more]
XP_022956789.1	2.10e-181	84.54	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita ...	[more]
XP_023513804.1	2.01e-179	83.22	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita ...	[more]

BLAST of MC09g1720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DBC0	5.39e-217	100.00	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X2 ...	[more]
A0A6J1DCN6	1.53e-215	99.67	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 ...	[more]
A0A6J1J9M5	1.02e-181	84.54	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbit...	[more]
A0A6J1H029	1.02e-181	84.54	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbit...	[more]
A0A0A0KQF1	2.86e-165	79.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603980 PE=4 SV=1	[more]

BLAST of MC09g1720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G59840.1	2.5e-103	67.46	cofactor assembly of complex C	[more]
AT1G59840.2	2.5e-103	67.46	cofactor assembly of complex C	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021325	Cofactor assembly of complex C subunit B, CCB2/CCB4	PFAM	PF11152	CCB2_CCB4	coord: 78..288 e-value: 1.3E-56 score: 191.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..54
IPR044705	COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4	PANTHER	PTHR34943	FAMILY NOT NAMED	coord: 1..297

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g1720.1	MC09g1720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010190	cytochrome b6f complex assembly
cellular_component	GO:0009507	chloroplast