MC09g1684 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g1684
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	40S ribosomal protein S9
Location	MC09: 22195600 .. 22197804 (+)
RNA-Seq Expression	MC09g1684
Synteny	MC09g1684

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAAAACAAAAAAAGTGTTATCACACACCCAAGAGGCCACAAGAGATTGAAATTGGGCTTTATGCAAAGCCCATTTAGAATTGGCCCGTCTCTTCCTGGCTGCCTAGGGCTCACAATCTACTCATATAAGCGCCGAGCTATTTTCCTCTCGTCCGGCGCTTTCTGAAATTTCCTCCCGTTCGGCGCTTCTCGCCTTCGTCTCTAGGGCTTTTAATCGACATCACACAGGTACTGAAGCCGTAACAGAGGAGAAATCATGGTGCACGTCTCCTTCTATAGGAACTGTGAGTATACTCAACCCAGCAAATTTCCGAAATTTCGTAGTCACTGTTTTCTAAAATGGCTTTCAAAGATCTGCTATAAGTATACATTTGCTTCATTTTAATGCCCATTTTTTTGGATCTTCTATTTCTCCTATGCGTTTCTTGTTAGTTATTTATTTTTTTGGGTTTTCCGGCTGTGTATGTTAGGCTACTTGTTTAATCGAAATAGATTGAACCAGGGGGGGAACCGACTGTTTGGGATTACATGTGGGGTTGCATCAGAATACATGCGGCCTCAGATTTCCTAGGGTTAAATTTATAATGCTTCACAAAATTTTGTTCTTTGCATCGTATGGAGATTAATAGATTAATCTATGACAGAGTACCTCTTACACAGTTTTTTAAATAGTACTTTATGAAATGCCTACTTCTTGGTGCTGTCACTGAGAGCCGTGATCTCTGAATCGTGGGTTCTCTCATTGTATAGATGGGAAGACATTCAAGAAACCACGACGCCCTTATGAGAAGGAGCGTCTGGATGCTGAACTTAAACTTGTAGGTGAATATGGGCTTCGTTGTAAAAGGGAGTTGTGGCGGGTTCAATATGCACTGAGCCGAATCCGTAATAATGCACGTATGCTTTTAACACTTGACGAAAAGAATCCCCGTAGGATTTTTGAGGGGGAGGCCCTGCTTAGGAGGATGAACAGGTATGGCCTTTTGGATGAGAGTCAGAACAAGCTTGATTATGTCTTGGCACTTACTGTGGAAAACTTCCTTGAGCGTCGTCTGCAAACCCTCGTGTTCAAGTCTGGAATGGCAAAGTCCATCCATCATGCTAGAGTGCTCATCAGGCAGAGGCATATAAGGTAGAGGGCTTGATTATATTCTTTCCCGAAGAATTATACAATATTGTAGCATTCTAATTTCTTACTTGAATGCATGCCAATATTATTTTTTCTGGTTAAATTTTATTAAATATCCCTAAACTATGTGGTCGGTTTCAATTATCCTCATTTTGTTTTTAGTGAGTTGTAGCTACTAATTTTGTGTATCTTCAAGGAGAAGGATTTTGCTATTATGAACAAATGCTTGCATTGGACACTTCATGAACGATGAAATGTCTTTTCTAGACAACTTAAAAGCTTTAGTGTTAAATGAAACATTTAAAACAACTTATTGTTGAATGAAACATTTAAAACAACAAGTGTATAATTGAAACCAGTCCTATAATTTAGAGGTATTTTTATATAATTTAGCCTTCTATTTTACATTAGCCGATTATATTTGTTTTTGCACCTTCTATTAGATTTTTTATGCTTAATGATCAACTGCTTGAAGATCATATTTGTTTCCTGAGAAATGGAAGTTGTAATGCTGCCAGCAAAACAGTAAATAAATTGTTTATTGTTCTTATTTCTATCTTTTACTATATTGAAGCATTCAATGTTAATGATTTCATCTGTTACATTTATCTCCTTTGCCCTTGTAGGGTTGGGAGGCAAGTGGTTAATATCCCATCTTTCATGGTGAGAGTTGATTCTCAGAAGCACATTGACTTCTCCCTCACAAGTCCATTCGGAGGTGGACGCCCTGGAAGGGTGAAGAGAAAGAACCAGAAGGCAGCTGCGAAGAAGGCTGCTGGTGGAGATGGAGATGAAGAAGATGAGGATTGAGTTATTGACTAAAAACAAATCATCCGAAATGGTAAAAATTAGGCAAGAATCTCAGGTATCTGAGATAAAAGTTCAACACTCAAAGTGAACCTTATCTATCCCTTGATGAGAATGTTACATCTTTTAGAAGTTTTGCTTTAATTATTTTTCATTAGAGATTTCGGTTGTTCTTGGGTGGTGGGACTAGTTTTTGATCTTGTGGACAGGCTTCTCTTCTGTTTTTAGTTTCCATAGTTTTCATGCAATGACAGGACTTATTTTCCC

mRNA sequence

AACAAAAACAAAAAAAGTGTTATCACACACCCAAGAGGCCACAAGAGATTGAAATTGGGCTTTATGCAAAGCCCATTTAGAATTGGCCCGTCTCTTCCTGGCTGCCTAGGGCTCACAATCTACTCATATAAGCGCCGAGCTATTTTCCTCTCGTCCGGCGCTTTCTGAAATTTCCTCCCGTTCGGCGCTTCTCGCCTTCGTCTCTAGGGCTTTTAATCGACATCACACAGGTACTGAAGCCGTAACAGAGGAGAAATCATGGTGCACGTCTCCTTCTATAGGAACTATGGGAAGACATTCAAGAAACCACGACGCCCTTATGAGAAGGAGCGTCTGGATGCTGAACTTAAACTTGTAGGTGAATATGGGCTTCGTTGTAAAAGGGAGTTGTGGCGGGTTCAATATGCACTGAGCCGAATCCGTAATAATGCACGTATGCTTTTAACACTTGACGAAAAGAATCCCCGTAGGATTTTTGAGGGGGAGGCCCTGCTTAGGAGGATGAACAGGTATGGCCTTTTGGATGAGAGTCAGAACAAGCTTGATTATGTCTTGGCACTTACTGTGGAAAACTTCCTTGAGCGTCGTCTGCAAACCCTCGTGTTCAAGTCTGGAATGGCAAAGTCCATCCATCATGCTAGAGTGCTCATCAGGCAGAGGCATATAAGGGTTGGGAGGCAAGTGGTTAATATCCCATCTTTCATGGTGAGAGTTGATTCTCAGAAGCACATTGACTTCTCCCTCACAAGTCCATTCGGAGGTGGACGCCCTGGAAGGGTGAAGAGAAAGAACCAGAAGGCAGCTGCGAAGAAGGCTGCTGGTGGAGATGGAGATGAAGAAGATGAGGATTGAGTTATTGACTAAAAACAAATCATCCGAAATGGTAAAAATTAGGCAAGAATCTCAGGTATCTGAGATAAAAGTTCAACACTCAAAGTGAACCTTATCTATCCCTTGATGAGAATGTTACATCTTTTAGAAGTTTTGCTTTAATTATTTTTCATTAGAGATTTCGGTTGTTCTTGGGTGGTGGGACTAGTTTTTGATCTTGTGGACAGGCTTCTCTTCTGTTTTTAGTTTCCATAGTTTTCATGCAATGACAGGACTTATTTTCCC

Coding sequence (CDS)

ATGGTGCACGTCTCCTTCTATAGGAACTATGGGAAGACATTCAAGAAACCACGACGCCCTTATGAGAAGGAGCGTCTGGATGCTGAACTTAAACTTGTAGGTGAATATGGGCTTCGTTGTAAAAGGGAGTTGTGGCGGGTTCAATATGCACTGAGCCGAATCCGTAATAATGCACGTATGCTTTTAACACTTGACGAAAAGAATCCCCGTAGGATTTTTGAGGGGGAGGCCCTGCTTAGGAGGATGAACAGGTATGGCCTTTTGGATGAGAGTCAGAACAAGCTTGATTATGTCTTGGCACTTACTGTGGAAAACTTCCTTGAGCGTCGTCTGCAAACCCTCGTGTTCAAGTCTGGAATGGCAAAGTCCATCCATCATGCTAGAGTGCTCATCAGGCAGAGGCATATAAGGGTTGGGAGGCAAGTGGTTAATATCCCATCTTTCATGGTGAGAGTTGATTCTCAGAAGCACATTGACTTCTCCCTCACAAGTCCATTCGGAGGTGGACGCCCTGGAAGGGTGAAGAGAAAGAACCAGAAGGCAGCTGCGAAGAAGGCTGCTGGTGGAGATGGAGATGAAGAAGATGAGGATTGA

Protein sequence

MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQKAAAKKAAGGDGDEEDED

Homology

[Close]

BLAST of MC09g1684 vs. ExPASy Swiss-Prot
Match: Q9FLF0 (40S ribosomal protein S9-2 OS=Arabidopsis thaliana OX=3702 GN=RPS9C PE=1 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.2e-98
Identity = 180/197 (91.37%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MV+V FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN AR 
Sbjct: 1   MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQRHIRVGRQ+VNIPSFMVRV+SQKH+DFSLTSPFGGGRPGRVKR+N++
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180

Query: 181 AAAKKAAGGDGDEEDED 198
           A AKKA+GGDGDE+DE+
Sbjct: 181 AGAKKASGGDGDEDDEE 197

[Close]

BLAST of MC09g1684 vs. ExPASy Swiss-Prot
Match: Q9LXG1 (40S ribosomal protein S9-1 OS=Arabidopsis thaliana OX=3702 GN=RPS9B PE=1 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 4.4e-93
Identity = 173/198 (87.37%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR 
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHH+RVLIRQRHIRVG+Q+VNIPSFMVR+DSQKHIDF+LTSPFGGGRPGRVKR+N+K
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180

Query: 181 AAAKKAAGG---DGDEED 196
           +A+KKA+GG   DGD+E+
Sbjct: 181 SASKKASGGGDADGDDEE 198

[Close]

BLAST of MC09g1684 vs. ExPASy Swiss-Prot
Match: P52810 (40S ribosomal protein S9 OS=Podospora anserina OX=2587412 GN=RPS9 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.6e-71
Identity = 141/191 (73.82%), Postives = 164/191 (85.86%), Query Frame = 0


Query: 8   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEK 67
           R+Y KT K PRRP+E  RLD+ELKLVGEYGLR KRE+WRV   LS+IR  AR LLTLDEK
Sbjct: 4   RSYSKTAKVPRRPFEAARLDSELKLVGEYGLRNKREVWRVLLTLSKIRRAARELLTLDEK 63

Query: 68  NPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHA 127
           +P+R+FEG AL+RR+ R G+LDES+ KLDYVLAL  E+FLERRLQTLV+K G+AKSIHHA
Sbjct: 64  DPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHHA 123

Query: 128 RVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQKAAAKKAA 187
           RVLIRQRHIRVG+Q+VN+PSF+VR+DSQKHIDF+LTSPFGGGRPGRV+RK     AK A 
Sbjct: 124 RVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRVRRKK----AKAAE 183

Query: 188 GGDGD-EEDED 198
           GGDGD EEDE+
Sbjct: 184 GGDGDAEEDEE 190

[Close]

BLAST of MC09g1684 vs. ExPASy Swiss-Prot
Match: A6QLG5 (40S ribosomal protein S9 OS=Bos taurus OX=9913 GN=RPS9 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.4e-69
Identity = 133/184 (72.28%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 12  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRR 71
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR  AR LLTLDEK+PRR
Sbjct: 11  KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70

Query: 72  IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLI 131
           +FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLI
Sbjct: 71  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130

Query: 132 RQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQKAAAKKAAGGDG 191
           RQRHIRV +QVVNIPSF+VR+DSQKHIDFSL SP+GGGRPGRVKRKN K     A  GD 
Sbjct: 131 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDD 190

Query: 192 DEED 196
           +EED
Sbjct: 191 EEED 194

[Close]

BLAST of MC09g1684 vs. ExPASy Swiss-Prot
Match: P46781 (40S ribosomal protein S9 OS=Homo sapiens OX=9606 GN=RPS9 PE=1 SV=3)

HSP 1 Score: 262.7 bits (670), Expect = 3.4e-69
Identity = 133/184 (72.28%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 12  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRR 71
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR  AR LLTLDEK+PRR
Sbjct: 11  KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70

Query: 72  IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLI 131
           +FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLI
Sbjct: 71  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130

Query: 132 RQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQKAAAKKAAGGDG 191
           RQRHIRV +QVVNIPSF+VR+DSQKHIDFSL SP+GGGRPGRVKRKN K     A  GD 
Sbjct: 131 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDD 190

Query: 192 DEED 196
           +EED
Sbjct: 191 EEED 194

[Close]

BLAST of MC09g1684 vs. NCBI nr
Match: XP_022142910.1 (40S ribosomal protein S9-2 [Momordica charantia] >XP_022151237.1 40S ribosomal protein S9-2 [Momordica charantia] >XP_038893425.1 40S ribosomal protein S9-2 [Benincasa hispida])

HSP 1 Score: 388 bits (996), Expect = 7.79e-136
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 197
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]

BLAST of MC09g1684 vs. NCBI nr
Match: XP_004135180.1 (40S ribosomal protein S9-2 [Cucumis sativus] >XP_004141548.1 40S ribosomal protein S9-2 [Cucumis sativus] >XP_008446334.1 PREDICTED: 40S ribosomal protein S9-2 [Cucumis melo] >XP_008459594.1 PREDICTED: 40S ribosomal protein S9-2 [Cucumis melo] >XP_022925366.1 40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022957390.1 40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022973538.1 40S ribosomal protein S9-2-like [Cucurbita maxima] >XP_022987602.1 40S ribosomal protein S9-2-like [Cucurbita maxima] >XP_023535520.1 40S ribosomal protein S9-2-like [Cucurbita pepo subsp. pepo] >XP_023552855.1 40S ribosomal protein S9-2-like [Cucurbita pepo subsp. pepo] >XP_038891088.1 40S ribosomal protein S9-2-like [Benincasa hispida] >KAA0034405.1 40S ribosomal protein S9-2-like [Cucumis melo var. makuwa] >KAG6592358.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAA0039283.1 40S ribosomal protein S9-2-like [Cucumis melo var. makuwa] >KAG6601424.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KGN51904.1 hypothetical protein Csa_008331 [Cucumis sativus])

HSP 1 Score: 387 bits (993), Expect = 2.23e-135
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 197
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]

BLAST of MC09g1684 vs. NCBI nr
Match: XP_024018555.1 (40S ribosomal protein S9-2 [Morus notabilis] >PON71929.1 Ribosomal protein [Parasponia andersonii] >PON83707.1 Ribosomal protein [Trema orientale])

HSP 1 Score: 387 bits (993), Expect = 2.23e-135
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKR+NQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 197
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]

BLAST of MC09g1684 vs. NCBI nr
Match: XP_022141887.1 (40S ribosomal protein S9-2-like [Momordica charantia])

HSP 1 Score: 386 bits (992), Expect = 3.17e-135
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 197
            AAKKAAGGDGDEEDED
Sbjct: 181 VAAKKAAGGDGDEEDED 197

[Close]

BLAST of MC09g1684 vs. NCBI nr
Match: XP_015883538.1 (40S ribosomal protein S9-2 [Ziziphus jujuba])

HSP 1 Score: 385 bits (990), Expect = 6.40e-135
Identity = 195/197 (98.98%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDENQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQRHIRVGRQVVNIPSFMVR+DSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRLDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 197
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]

BLAST of MC09g1684 vs. ExPASy TrEMBL
Match: A0A6J1DCX8 (40S ribosomal protein S9-2 OS=Momordica charantia OX=3673 GN=LOC111019211 PE=3 SV=1)

HSP 1 Score: 388 bits (996), Expect = 3.77e-136
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 197
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]

BLAST of MC09g1684 vs. ExPASy TrEMBL
Match: A0A6J1JAT4 (40S ribosomal protein S9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485110 PE=3 SV=1)

HSP 1 Score: 387 bits (993), Expect = 1.08e-135
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 197
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]

BLAST of MC09g1684 vs. ExPASy TrEMBL
Match: A0A0A0KSN1 (S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604980 PE=3 SV=1)

HSP 1 Score: 387 bits (993), Expect = 1.08e-135
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 197
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]

BLAST of MC09g1684 vs. ExPASy TrEMBL
Match: A0A1S3CA34 (40S ribosomal protein S9-2 OS=Cucumis melo OX=3656 GN=LOC103498678 PE=3 SV=1)

HSP 1 Score: 387 bits (993), Expect = 1.08e-135
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 197
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]

BLAST of MC09g1684 vs. ExPASy TrEMBL
Match: A0A6J1EC07 (40S ribosomal protein S9-2-like OS=Cucurbita moschata OX=3662 GN=LOC111432674 PE=3 SV=1)

HSP 1 Score: 387 bits (993), Expect = 1.08e-135
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 197
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]

BLAST of MC09g1684 vs. TAIR 10
Match: AT5G39850.1 (Ribosomal protein S4 )

HSP 1 Score: 360.5 bits (924), Expect = 8.4e-100
Identity = 180/197 (91.37%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MV+V FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN AR 
Sbjct: 1   MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQRHIRVGRQ+VNIPSFMVRV+SQKH+DFSLTSPFGGGRPGRVKR+N++
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180

Query: 181 AAAKKAAGGDGDEEDED 198
           A AKKA+GGDGDE+DE+
Sbjct: 181 AGAKKASGGDGDEDDEE 197

[Close]

BLAST of MC09g1684 vs. TAIR 10
Match: AT5G15200.1 (Ribosomal protein S4 )

HSP 1 Score: 342.0 bits (876), Expect = 3.1e-94
Identity = 173/198 (87.37%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR 
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHH+RVLIRQRHIRVG+Q+VNIPSFMVR+DSQKHIDF+LTSPFGGGRPGRVKR+N+K
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180

Query: 181 AAAKKAAGG---DGDEED 196
           +A+KKA+GG   DGD+E+
Sbjct: 181 SASKKASGGGDADGDDEE 198

[Close]

BLAST of MC09g1684 vs. TAIR 10
Match: AT5G15200.2 (Ribosomal protein S4 )

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-66
Identity = 126/137 (91.97%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR 
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIR 138
           AKSIHH+RVLIRQRHIR
Sbjct: 121 AKSIHHSRVLIRQRHIR 137

[Close]

BLAST of MC09g1684 vs. TAIR 10
Match: AT5G15750.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein )

HSP 1 Score: 42.0 bits (97), Expect = 6.6e-04
Identity = 29/130 (22.31%), Postives = 61/130 (46.92%), Query Frame = 0


Query: 21  YEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLR 80
           +++E    E ++   Y +  + +  +       ++    ++  +D  +P RI   + LL 
Sbjct: 20  WKREGNHRENEITYRYHMGSRDDYKKYSGLCRMVQKLTNIMKQMDPADPFRIQMTDMLLE 79

Query: 81  RMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGR 140
           ++   G++  ++  L     L+V +F  RRL T++     A+    A   I Q H+RVG 
Sbjct: 80  KLYNMGVI-PTRKSLTLTERLSVSSFCRRRLSTVLVHLKFAEHHKEAVTYIEQGHVRVGP 139

Query: 141 QVVNIPSFMV 151
           + +  P+F+V
Sbjct: 140 ETITDPAFLV 148

The following BLAST results are available for this feature:

BLAST of MC09g1684 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLF0	1.2e-98	91.37	40S ribosomal protein S9-2 OS=Arabidopsis thaliana OX=3702 GN=RPS9C PE=1 SV=1	[more]
Q9LXG1	4.4e-93	87.37	40S ribosomal protein S9-1 OS=Arabidopsis thaliana OX=3702 GN=RPS9B PE=1 SV=1	[more]
P52810	3.6e-71	73.82	40S ribosomal protein S9 OS=Podospora anserina OX=2587412 GN=RPS9 PE=3 SV=1	[more]
A6QLG5	3.4e-69	72.28	40S ribosomal protein S9 OS=Bos taurus OX=9913 GN=RPS9 PE=2 SV=1	[more]
P46781	3.4e-69	72.28	40S ribosomal protein S9 OS=Homo sapiens OX=9606 GN=RPS9 PE=1 SV=3	[more]

BLAST of MC09g1684 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142910.1	7.79e-136	100.00	40S ribosomal protein S9-2 [Momordica charantia] >XP_022151237.1 40S ribosomal p...	[more]
XP_004135180.1	2.23e-135	99.49	40S ribosomal protein S9-2 [Cucumis sativus] >XP_004141548.1 40S ribosomal prote...	[more]
XP_024018555.1	2.23e-135	99.49	40S ribosomal protein S9-2 [Morus notabilis] >PON71929.1 Ribosomal protein [Para...	[more]
XP_022141887.1	3.17e-135	99.49	40S ribosomal protein S9-2-like [Momordica charantia]	[more]
XP_015883538.1	6.40e-135	98.98	40S ribosomal protein S9-2 [Ziziphus jujuba]	[more]

BLAST of MC09g1684 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DCX8	3.77e-136	100.00	40S ribosomal protein S9-2 OS=Momordica charantia OX=3673 GN=LOC111019211 PE=3 S...	[more]
A0A6J1JAT4	1.08e-135	99.49	40S ribosomal protein S9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485110 PE=3...	[more]
A0A0A0KSN1	1.08e-135	99.49	S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604...	[more]
A0A1S3CA34	1.08e-135	99.49	40S ribosomal protein S9-2 OS=Cucumis melo OX=3656 GN=LOC103498678 PE=3 SV=1	[more]
A0A6J1EC07	1.08e-135	99.49	40S ribosomal protein S9-2-like OS=Cucurbita moschata OX=3662 GN=LOC111432674 PE...	[more]

BLAST of MC09g1684 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39850.1	8.4e-100	91.37	Ribosomal protein S4	[more]
AT5G15200.1	3.1e-94	87.37	Ribosomal protein S4	[more]
AT5G15200.2	1.2e-66	91.97	Ribosomal protein S4	[more]
AT5G15750.1	6.6e-04	22.31	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001912	Ribosomal protein S4/S9, N-terminal	SMART	SM01390	Ribosomal_S4_2	coord: 8..108 e-value: 6.8E-25 score: 98.7
IPR001912	Ribosomal protein S4/S9, N-terminal	PFAM	PF00163	Ribosomal_S4	coord: 15..64 e-value: 1.4E-6 score: 29.1
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 109..180 e-value: 2.5E-5 score: 33.7
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 109..152 e-value: 3.0E-13 score: 49.2
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 109..153 e-value: 4.37289E-9 score: 49.1702
IPR005710	Ribosomal protein S4/S9, eukaryotic/archaeal	TIGRFAM	TIGR01018	TIGR01018	coord: 11..166 e-value: 9.9E-65 score: 215.4
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 108..166 e-value: 1.7E-14 score: 55.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..197
None	No IPR available	PANTHER	PTHR11831:SF34	40S RIBOSOMAL PROTEIN S9-2-LIKE	coord: 5..197
None	No IPR available	PROSITE	PS50889	S4	coord: 109..180 score: 10.99744
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 12..159
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 5..197
IPR018079	Ribosomal protein S4, conserved site	PROSITE	PS00632	RIBOSOMAL_S4	coord: 107..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g1684.1	MC09g1684.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045903	positive regulation of translational fidelity
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding