MC09g1664 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g1664
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	50S ribosomal protein L18
Location	MC09: 22097300 .. 22104040 (+)
RNA-Seq Expression	MC09g1664
Synteny	MC09g1664

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGATGTTTATATAAAATTGAGAATTCTACATTTCCATCCACATAGACATGTAGCGTAAAATATTGTGCTCGATCACTCTATTGAAAGTGTTCCATAGCCAATGTAACGAATCCCGCTCAAGCGGATCCAATAGTGTGAGCCGTAAAGCATAGATCGTGAGAAATAAAAATAGTAATAAACGGAAAGTTGAAATTTGAAGAAAAAGAATGGGGTTGAGCTATCCCGTCCATATACACGTGGAAGAAGACGGTAGGCAACATATTTTGGTTTCTCCTGCAACCACAGAGACGCCAATCGGGCTTTTACAGTACAGAATCAAACAGGCTTCAACAACGAAACCACATTCATTCCGCCGGAACTCTGGCTCGGCAGGTAGCTTTATAAAGCATGGCGATGTTTATGTTCTCTTAGCTAACGTCTCCTCTCCAATGTAATTAAAAATTCCTGGATTAAAGTCTTGAGTGATTTTTCTTCCTTAATTCCTTTGGGTTTCGCTATTTATGCGTCTCCTTTTCAATATGGTGTTTGGGTTCCGCTTGACTTAACGCGCTGAATTGTCGATCACTTTTTCAGGTGTCGCGTGCAAGGTGTTCGATAAAATGCCTGAATGAAGAGGACCGCGTCGAAATGCCCCTTTCACTTCTCAATACTTTAGATTTTCAAAAAGTATACGGTGGCATGCCTCTTGTAAATCTTCCCGGTCTGCTATCGAAGTCTTCTACGCCCTTTGGGTTTCAGTCAAAGCCATTTAATTTCCCCTCCTTGAAAAGTAAAAGTAAGTGAAATTGCACCTGCTTTTGCTCCTAGTCTATATTGAAATCAATATATCTCTTCTTGGACGAAGTTGATGAGTAAAACTACAGAACACTGGCTGGAGGTTATACCTATCATACTAAATAGAATACTTCACGAAGATGGATTTTGTTTTATATTAGTTTCTAAATTTCGTGTAGATTGCGATTTGAAGCCGTTGATTATCCAAGCAAGAGGACACTCTAAACCAGAAAGTGCAAAAATTAGAAATAGGAGGATGCAGAAAAAGGTACGCTATCATTCTCCATCTCGAAAGCGCCCTTCTGAAATCACAGGCTCTTGCCCTTTATTCGAAAGAAAAAAAGTTAGTCTCTTTGTAAAGGTCTCCTCGTTTTTCACTTTTAGTTTTTACAACGTTGTAGCACTGCCACTGAGTCATCAGCAGTTTGCCTCAGTTGCCTCGTTGACAGTCACTTTTTTTTTTTTTGTATTTCTGTTGAGAGCATTAAGGTTAGGTGGTCTTAAATGTTTTTTTGTACTCAATTTGTGTTGTGAGCTCGTGGACATTATTAAAATTTTAAGCATCACACTGTGTTTTTAATTATCATAGTAATACTTATTTTCTAATTTCATTTGATGGTTTTCAACGCCAAGCAGTATAATGGCACTCCTAAAAGACCAAGGCTTTCAGTATTCTGTTCTGATAAGCAGTTATATGCAATGCTGGTAGACGACCAGAACAAGAAGTGCCTCTTTTATGGGAGCACCCTGCAGAAATCTATGCGTCCAAATCCCTCGTGCACCACCATTGTAGGATTTCATCTCAATTTTCCACCTTCATTCCACCAACTTAAGATGATAACAGTCCTGATAAGAAGCTATTATTGAATAGAAAAAGGCCTAATTTGTTGCTTTGGTGATTACAGGAAGCTGCTCAGTACGTTGGTGAAGAACTTGTGAAGACATGTGAGGATTTGAACATCCACGAAATATCATCTTATGACCGAAACGGGTTTGCTCGTGGAGAGAAGATGCAAGCCTTTGAGATTGCAATTTCACACTATGGGTTCTTACAGCGATAGATTTGCCAGGAATTAAGGCAAGTTGTAATCGTAAATGCCTTGTTCACACTGTTAATTTATCTAAACACATTCGTTTTCATTTCTATGATAAGTTGTCCAGAAAAGGATGAAGTTATGATAACAAATGATGCTGTGTACTTGTTTGTGCCCCGCAGCTGTGTGAGAGAACCGTTGTTAAAACAATAGAAATCCGATTCAAACAATTTCAACAGCATGATTTGATAAAATTCAATTGATTCACCATTCTATATACCACTTTACAGGCTACAGCTCTCTTTCTATCATGTCTCTCTCGGTCACTTGAAATATACAAAATTTCAAGCAACTCTTGAAAATCCATATACTTCTCTACAGTAACACCTAATTATACAGCAGTCGTTAAGAGGGTTTAAAAATTCTCATGTTACCTCTTCTGTTTCAGGGGTATCAACCCTGGTGTGATCTTTCATCTAACTCTACTTCGATGGTGTCAGAATAGTTACTCCATTTCCAGGCTGCTTAGAACATAACTCCTCTTAGTTATCAGAACCACAGCATCTAATACCATTTCCTTCCTGAAGTTTCTGCCACAAACAGAGCATCTCTCGAGGTTCCTGGTAGTGAGCAACCACATAATCATCCTTACAACCTTCAATATGGATCCTATCGTCCTTCTCGTACCGAATCTGAAGGCCCTCCCTCTTCATATTTTCAATCCAGATTCCCATGGCTACATCTTCTAATTTGAACATCTGAAGATATAATAGCCTGGTTTTAATTCATCGTTTATGGAAAAGTACCTATTTCAAGCAAAGAAATAACGGATACCTTTAAGCGGCCCTCTTTATATTTCTTGGAGATCGTCTTTGCTATGTCACTAGACACCACATAACCAGGACCATGTGCCCATGTTGGATAATTCTCTTCAGGCCATTCCTAAATTGGAGCAACCAATGAAGATAAGATGGTAGAAAGAAAACTAATTTTCTTTTATTAAATTAATCCAAGTACGCTACATTGGCAAATGGAACCATATTCTGAGCGAGCTTGTTCAAAAGTGTGAATAATATTCGACAGACTCTTTTATAATATAAATATCAGCCTAATTCAAAGCATACCAACTCAAACATGGTGGAATAAACCAGGGTTTTTAGTAAAGCAAGGGATAGATTAAGACCCATAAAAGTGGGAAAAAGGTGAGTGAATTTTCAGCCTTGAGTTATCCACGCAATGTTAGATCCTATGCCCATATAATAAAAAACCAGTGTTGAAAATTACCTCCATACTAATATACCACTTGCTCTCAGGGTTTCTGTGAGGTTGAGAATCTGAGTTGATGAGTCCATAAAGCAATCCACTTTGTGCATTGATCCTTTTTAAAGAAGCTAAAACTTCATCCACTCGAACAAAGGCGTCATCATCGGTCTTCATGATGTACTTTGCTGAAGCTATCTCTGCCTGCCAAAGTGGTGAGATTATTAACATGAATCATAATGATGAGTTCACATCATTTAGTGAAAGAACGAAACTTTACCCCAAAGATACAGATACCCAACGTTTTCCAGGTTATAAGGCTGTAGTAGTCAACAAAAGGCATCATCTGTATGTCACCATATGTTCGGGCTTCATCCCACAGTTCCTCATTGACTATTTGGTTCTTATGCTGCAAATGATGTAAAGTGATTGTAAACCACTACGGGTTGTACTCTTCATAGTATGTGAATTTTAAGAGACGGATGATGAAAGAAACAAAAACATTTGTATACTTTTAATATGAACAGCAGATGAATCATTCCAGTTCAAGTATCCAACCGATGAAATTTTGAACTAGTGTAGCAGATCTTATCAAGCACCTCACTCAATTTCACTTGAAGGCATTATGAGCAGACTTAGAAGTGGCCTCAAGATAAACTTTGGAAGTAAACTACGTGGTTCATTCAACAAACAGCTAGACTTTTTCATACTCAATGAAACCGCCAGCTTCAATATGCATGAAAAGTTTTTAGCCTAATTTTTTTTGAGGTTCTTTTCAATCCAAGAAGAGTACATGTGAAGCTCACCAACCCAACAAAAAAGCGAACTGCAACAGATCCCGACTGTACTGCAAGATACTGCATCCACGTTCTTCGAACAGCCATTCGATATTTAAAATTGTTTGCCGTTGAGAAAACACCGATGAACAGATCTAATTGTTTTTCTGTAGAGAGGGGAGTTGATTTTAATGCTTCTATATTAACTATATGATCTGAATCCTCAGATGTGGGCAAACCACTTGCCAGGACAGAAATTAATTTCAAGTCTCCAGAAATCTTTACTTCACTGACCAGCCATGGCTCCAAAGTCTGAGTAAGAAGCAAGTCAAAACAGCATAAGATTGAGTGATCAGAGAACAATGTAAAGGTAATTGATATAAGACTGGGTGAGATTACTTCACGGTAAGCAAAAGAAGTAACGTGCTTTCCATCAACTGTCATCTGGATTCCATCCACTCCCACTCTAAGTGTAGCAGCAAATGGATGACCGAGTTTGAAAGGGAAGTACTTTATTGTTTTAGCTCCTTGCACCACAGATTTTGATTTGTTGAAATTCTTGTTCAACTCAGGAAGTCGATTTTCGACATTGCCCACAATCTTGTTGCATTTTTCCAATTCATCCACTAGCATAAAAAATGAACAACGTTAACTTCAAAGTGAATGGAAATAGTGCTTGATTGGGGGAGGGAACCTAATACATTGTTCAGTTCAATGTTATGAAGTTTATGGATGCAATGTTCTCAATTTCCCTAGCCATTGATGAGTCAAATATGGCCTGCTTCGTAACAAAGTATAAAGGTAAGGTTTTTTATCAGCAAACCTGAATTGTTTATAAAAACGACACATTTCAATCGGAATATACAAACAGCTACATATTTTAAATGCAGAAATCTGACTAGAACAGTTATTTTACGTTAGTGGTGTCTTGAATGAAATAATTCAAAGGAAACATGAATAGACATCTATACCTTTTCCATTCTCGTCAGAACCAGGGGGCGGGCATCGATCCTCTTCTCCCCAATCACGAGATACTGTCCAGGTGTTCTGGACAATTACAGGATCCTCAGTTAATTTATCCCCCAAAAGCCTAACATTATAATGCAAAATGATGGGTGGCTCAGGCTCCCCAGGCAGTGGTTCCCCAGTCAAGTCAATTCGAAAGTTACCAAGAAGACCATCTGGAATGCCAATGACTGTGATGGAAGAACCCTGAGTAAGGCCACAAGGCATTCTTAGCTTATGACCATTGCTGTCAACCTTTGTTGCATTCATTTTGGTCAGAAAATGGGGGCATTGCTTCTCTTTCGCACGTGCACTTTCATTCGTATAACCAAGCCTTTCCTTTTCAATCGAAGTTTTTAGAAAATCCCATACGCCTCCAGCTTCCTTAATGGCCTCAACTGCATTAGGCAAACCTCGGGTACAATTAATTATGCTTCTTAAATGGTTCCAAGTCTGCAGAGATTGATTCTCTCCGTCAGTAAAATTCCCCTGAGTGAAGAGACTGGATACTATAGAGTCGGCAGAAATCACTTGGTATGCAATTTCAGGATTTTGAACTGCAGGTGGAACTGCAGGATTGAGCCACTGAAGAGGATCAATAGAATTGTACAAGGGGTTTGCATAATAATTTTCCCGAGACGAACTTCTCGTGATAACATAAATCATCAACAGCAATGTAAACAAGGACGCAACCAGAACCCGGCCATAGCTTTTCTTCATTCTGGCGTTCAAATGATACCCTAATAGGCAATAGCTCTAAGCCCAAGTTTGACCATCATTAAGCATCACGAAACTGAAGTTCCAATGGCTGGAAACCTTGTTTCTTGAGACGAACTCTGAAAGCGCATTGTATGAAAGATTCGATCATGAAGAACATATATATCTAGAAACAAATGGTAAATGAGTTTTGACAATATGAATATATACATATAAAAAAAATCATCTTCAACTTTCCGGTTAAAATTAATATATATACAATACCGAGGAACGGCCAGGACTTCAACAAGGGATAAAACTCACTAATTTTTTCTTCTCTTTGAATAAGATAGTCACGCCCAGCCCAAAATCAAAAGGCAAATAACAAGGAGAAAGTTCCTATTTAGAAGTTGATTCAAACTTTTGACATATATTAATTGTAAAATAATGAATCAATAAATGCACAAGAAAGTAGAACTACTTATTGCAGATATTTAATAGGTTCCTGCAGTTAATGGCAATATCAATAATCCTAACTTACATCCCGCGTCAATCGCAAAAAATATTTTCTTAAAAGAATTATTAAACAAAAAACCAGTGACGGTACCAGAAAGGAAATGGAGGAGTAAAGAAATCGAAAACTAAACAGAAACAAACAACAAACGATTCGTCCGCACTCCACTATGCACAGTTTTTCCAAACTATGAACGATTTCAAAAAGTAGCAAAACACAGAACAGAAAGAAGTGGAAAAGTAGACTTCGGTGTTCTTTAAGAAGTAAATCATCAGAACCTCGCAAATAGACTTCCGGCGACCGGAATCACGGCGAGATCCAAAGACATTGTGTAGCCGTTCCGCAGAACAAGAACCAGTACTCCGACCTCAACAGTCCGTCGGAGAAGAACATGCTGAGGCAAGGCGAAGAAAAAAGAGAGACCAAATTTAGTTTGAGAATGTGAACAGAAACTCCCGCCGGAAAAAATGCCGAGAAAATAAAGCCGACGCGGCAAGAAATTTAGGAAGTTAAAGGCGGTGGAGGAAGAAGAAAGAAGAGAAGAAGAAGACGAAGAAGGAGAGAGAAGGGGAAGTTGCAGTGAGTAATAGATCGCTGTCGTTTCAAGCTTGGAGTCGACGTCAAAGCATAGAAAAATTAAAATTAAAAAAAAAAAAGTAAAAAAGAAAAAACAACGTTGAA

mRNA sequence

TCGATGTTTATATAAAATTGAGAATTCTACATTTCCATCCACATAGACATGTAGCGTAAAATATTGTGCTCGATCACTCTATTGAAAGTGTTCCATAGCCAATGTAACGAATCCCGCTCAAGCGGATCCAATAGTGTGAGCCGTAAAGCATAGATCGTGAGAAATAAAAATAGTAATAAACGGAAAGTTGAAATTTGAAGAAAAAGAATGGGGTTGAGCTATCCCGTCCATATACACGTGGAAGAAGACGGTAGGCAACATATTTTGGTTTCTCCTGCAACCACAGAGACGCCAATCGGGCTTTTACAGTACAGAATCAAACAGGCTTCAACAACGAAACCACATTCATTCCGCCGGAACTCTGGCTCGGCAGGTGTCGCGTGCAAGGTGTTCGATAAAATGCCTGAATGAAGAGGACCGCGTCGAAATGCCCCTTTCACTTCTCAATACTTTAGATTTTCAAAAAGTATACGGTGGCATGCCTCTTGTAAATCTTCCCGGTCTGCTATCGAAGTCTTCTACGCCCTTTGGGTTTCAGTCAAAGCCATTTAATTTCCCCTCCTTGAAAAGTAAAAATTGCGATTTGAAGCCGTTGATTATCCAAGCAAGAGGACACTCTAAACCAGAAAGTGCAAAAATTAGAAATAGGAGGATGCAGAAAAAGTATAATGGCACTCCTAAAAGACCAAGGCTTTCAGTATTCTGTTCTGATAAGCAGTTATATGCAATGCTGGTAGACGACCAGAACAAGAAGTGCCTCTTTTATGGGAGCACCCTGCAGAAATCTATGCGTCCAAATCCCTCGTGCACCACCATTGAAGCTGCTCAGTACGTTGGTGAAGAACTTGTGAAGACATGTGAGGATTTGAACATCCACGAAATATCATCTTATGACCGAAACGGGTTTGCTCGTGGAGAGAAGATGCAAGCCTTTGAGATTGCAATTTCACACTATGGGTTCTTACAGCGATAGATTTGCCAGGAATTAAGGCAAGTTGTAATCGTAAATGCCTTGTTCACACTGTTAATTTATCTAAACACATTCGTTTTCATTTCTATGATAAGTTGTCCAGAAAAGGATGAAGTTATGATAACAAATGATGCTGTGTACTTGTTTGTGCCCCGCAGCTGTGTGAGAGAACCGTTGTTAAAACAATAGAAATCCGATTCAAACAATTTCAACAGCATGATTTGATAAAATTCAATTGATTCACCATTCTATATACCACTTTACAGGCTACAGCTCTCTTTCTATCATGTCTCTCTCGGTCACTTGAAATATACAAAATTTCAAGCAACTCTTGAAAATCCATATACTTCTCTACAGTAACACCTAATTATACAGCAGTCGTTAAGAGGGTTTAAAAATTCTCATGTTACCTCTTCTGTTTCAGGGGTATCAACCCTGGTGTGATCTTTCATCTAACTCTACTTCGATGGTGTCAGAATAGTTACTCCATTTCCAGGCTGCTTAGAACATAACTCCTCTTAGTTATCAGAACCACAGCATCTAATACCATTTCCTTCCTGAAGTTTCTGCCACAAACAGAGCATCTCTCGAGGTTCCTGGTAGTGAGCAACCACATAATCATCCTTACAACCTTCAATATGGATCCTATCGTCCTTCTCGTACCGAATCTGAAGGCCCTCCCTCTTCATATTTTCAATCCAGATTCCCATGGCTACATCTTCTAATTTGAACATCTGAAGATATAATAGCCTGGTTTTAATTCATCGTTTATGGAAAAGTACCTATTTCAAGCAAAGAAATAACGGATACCTTTAAGCGGCCCTCTTTATATTTCTTGGAGATCGTCTTTGCTATGTCACTAGACACCACATAACCAGGACCATGTGCCCATGTTGGATAATTCTCTTCAGGCCATTCCTAAATTGGAGCAACCAATGAAGATAAGATGGTAGAAAGAAAACTAATTTTCTTTTATTAAATTAATCCAAGTACGCTACATTGGCAAATGGAACCATATTCTGAGCGAGCTTGTTCAAAAGTGTGAATAATATTCGACAGACTCTTTTATAATATAAATATCAGCCTAATTCAAAGCATACCAACTCAAACATGGTGGAATAAACCAGGGTTTTTAGTAAAGCAAGGGATAGATTAAGACCCATAAAAGTGGGAAAAAGGTGAGTGAATTTTCAGCCTTGAGTTATCCACGCAATGTTAGATCCTATGCCCATATAATAAAAAACCAGTGTTGAAAATTACCTCCATACTAATATACCACTTGCTCTCAGGGTTTCTGTGAGGTTGAGAATCTGAGTTGATGAGTCCATAAAGCAATCCACTTTGTGCATTGATCCTTTTTAAAGAAGCTAAAACTTCATCCACTCGAACAAAGGCGTCATCATCGGTCTTCATGATGTACTTTGCTGAAGCTATCTCTGCCTGCCAAAGTGGTGAGATTATTAACATGAATCATAATGATGAGTTCACATCATTTAGTGAAAGAACGAAACTTTACCCCAAAGATACAGATACCCAACGTTTTCCAGGTTATAAGGCTGTAGTAGTCAACAAAAGGCATCATCTGTATGTCACCATATGTTCGGGCTTCATCCCACAGTTCCTCATTGACTATTTGGTTCTTATGCTGCAAATGATGTAAAGTGATTGTAAACCACTACGGGTTGTACTCTTCATAGTATGTGAATTTTAAGAGACGGATGATGAAAGAAACAAAAACATTTGTATACTTTTAATATGAACAGCAGATGAATCATTCCAGTTCAAGTATCCAACCGATGAAATTTTGAACTAGTGTAGCAGATCTTATCAAGCACCTCACTCAATTTCACTTGAAGGCATTATGAGCAGACTTAGAAGTGGCCTCAAGATAAACTTTGGAAGTAAACTACGTGGTTCATTCAACAAACAGCTAGACTTTTTCATACTCAATGAAACCGCCAGCTTCAATATGCATGAAAAGTTTTTAGCCTAATTTTTTTTGAGGTTCTTTTCAATCCAAGAAGAGTACATGTGAAGCTCACCAACCCAACAAAAAAGCGAACTGCAACAGATCCCGACTGTACTGCAAGATACTGCATCCACGTTCTTCGAACAGCCATTCGATATTTAAAATTGTTTGCCGTTGAGAAAACACCGATGAACAGATCTAATTGTTTTTCTGTAGAGAGGGGAGTTGATTTTAATGCTTCTATATTAACTATATGATCTGAATCCTCAGATGTGGGCAAACCACTTGCCAGGACAGAAATTAATTTCAAGTCTCCAGAAATCTTTACTTCACTGACCAGCCATGGCTCCAAAGTCTGAGTAAGAAGCAAGTCAAAACAGCATAAGATTGAGTGATCAGAGAACAATGTAAAGGTAATTGATATAAGACTGGGTGAGATTACTTCACGGTAAGCAAAAGAAGTAACGTGCTTTCCATCAACTGTCATCTGGATTCCATCCACTCCCACTCTAAGTGTAGCAGCAAATGGATGACCGAGTTTGAAAGGGAAGTACTTTATTGTTTTAGCTCCTTGCACCACAGATTTTGATTTGTTGAAATTCTTGTTCAACTCAGGAAGTCGATTTTCGACATTGCCCACAATCTTGTTGCATTTTTCCAATTCATCCACTAGCATAAAAAATGAACAACGTTAACTTCAAAGTGAATGGAAATAGTGCTTGATTGGGGGAGGGAACCTAATACATTGTTCAGTTCAATGTTATGAAGTTTATGGATGCAATGTTCTCAATTTCCCTAGCCATTGATGAGTCAAATATGGCCTGCTTCGTAACAAAGTATAAAGGTAAGGTTTTTTATCAGCAAACCTGAATTGTTTATAAAAACGACACATTTCAATCGGAATATACAAACAGCTACATATTTTAAATGCAGAAATCTGACTAGAACAGTTATTTTACGTTAGTGGTGTCTTGAATGAAATAATTCAAAGGAAACATGAATAGACATCTATACCTTTTCCATTCTCGTCAGAACCAGGGGGCGGGCATCGATCCTCTTCTCCCCAATCACGAGATACTGTCCAGGTGTTCTGGACAATTACAGGATCCTCAGTTAATTTATCCCCCAAAAGCCTAACATTATAATGCAAAATGATGGGTGGCTCAGGCTCCCCAGGCAGTGGTTCCCCAGTCAAGTCAATTCGAAAGTTACCAAGAAGACCATCTGGAATGCCAATGACTGTGATGGAAGAACCCTGAGTAAGGCCACAAGGCATTCTTAGCTTATGACCATTGCTGTCAACCTTTGTTGCATTCATTTTGGTCAGAAAATGGGGGCATTGCTTCTCTTTCGCACGTGCACTTTCATTCGTATAACCAAGCCTTTCCTTTTCAATCGAAGTTTTTAGAAAATCCCATACGCCTCCAGCTTCCTTAATGGCCTCAACTGCATTAGGCAAACCTCGGGTACAATTAATTATGCTTCTTAAATGGTTCCAAGTCTGCAGAGATTGATTCTCTCCGTCAGTAAAATTCCCCTGAGTGAAGAGACTGGATACTATAGAGTCGGCAGAAATCACTTGGTATGCAATTTCAGGATTTTGAACTGCAGGTGGAACTGCAGGATTGAGCCACTGAAGAGGATCAATAGAATTGTACAAGGGGTTTGCATAATAATTTTCCCGAGACGAACTTCTCGTGATAACATAAATCATCAACAGCAATGTAAACAAGGACGCAACCAGAACCCGGCCATAGCTTTTCTTCATTCTGGCGTTCAAATGATACCCTAATAGGCAATAGCTCTAAGCCCAAGTTTGACCATCATTAAGCATCACGAAACTGAAGTTCCAATGGCTGGAAACCTTGTTTCTTGAGACGAACTCTGAAAGCGCATTGTATGAAAGATTCGATCATGAAGAACATATATATCTAGAAACAAATGGTAAATGAGTTTTGACAATATGAATATATACATATAAAAAAAATCATCTTCAACTTTCCGGTTAAAATTAATATATATACAATACCGAGGAACGGCCAGGACTTCAACAAGGGATAAAACTCACTAATTTTTTCTTCTCTTTGAATAAGATAGTCACGCCCAGCCCAAAATCAAAAGGCAAATAACAAGGAGAAAGTTCCTATTTAGAAGTTGATTCAAACTTTTGACATATATTAATTGTAAAATAATGAATCAATAAATGCACAAGAAAGTAGAACTACTTATTGCAGATATTTAATAGGTTCCTGCAGTTAATGGCAATATCAATAATCCTAACTTACATCCCGCGTCAATCGCAAAAAATATTTTCTTAAAAGAATTATTAAACAAAAAACCAGTGACGGTACCAGAAAGGAAATGGAGGAGTAAAGAAATCGAAAACTAAACAGAAACAAACAACAAACGATTCGTCCGCACTCCACTATGCACAGTTTTTCCAAACTATGAACGATTTCAAAAAGTAGCAAAACACAGAACAGAAAGAAGTGGAAAAGTAGACTTCGGTGTTCTTTAAGAAGTAAATCATCAGAACCTCGCAAATAGACTTCCGGCGACCGGAATCACGGCGAGATCCAAAGACATTGTGTAGCCGTTCCGCAGAACAAGAACCAGTACTCCGACCTCAACAGTCCGTCGGAGAAGAACATGCTGAGGCAAGGCGAAGAAAAAAGAGAGACCAAATTTAGTTTGAGAATGTGAACAGAAACTCCCGCCGGAAAAAATGCCGAGAAAATAAAGCCGACGCGGCAAGAAATTTAGGAAGTTAAAGGCGGTGGAGGAAGAAGAAAGAAGAGAAGAAGAAGACGAAGAAGGAGAGAGAAGGGGAAGTTGCAGTGAGTAATAGATCGCTGTCGTTTCAAGCTTGGAGTCGACGTCAAAGCATAGAAAAATTAAAATTAAAAAAAAAAAAGTAAAAAAGAAAAAACAACGTTGAA

Coding sequence (CDS)

ATGCCCCTTTCACTTCTCAATACTTTAGATTTTCAAAAAGTATACGGTGGCATGCCTCTTGTAAATCTTCCCGGTCTGCTATCGAAGTCTTCTACGCCCTTTGGGTTTCAGTCAAAGCCATTTAATTTCCCCTCCTTGAAAAGTAAAAATTGCGATTTGAAGCCGTTGATTATCCAAGCAAGAGGACACTCTAAACCAGAAAGTGCAAAAATTAGAAATAGGAGGATGCAGAAAAAGTATAATGGCACTCCTAAAAGACCAAGGCTTTCAGTATTCTGTTCTGATAAGCAGTTATATGCAATGCTGGTAGACGACCAGAACAAGAAGTGCCTCTTTTATGGGAGCACCCTGCAGAAATCTATGCGTCCAAATCCCTCGTGCACCACCATTGAAGCTGCTCAGTACGTTGGTGAAGAACTTGTGAAGACATGTGAGGATTTGAACATCCACGAAATATCATCTTATGACCGAAACGGGTTTGCTCGTGGAGAGAAGATGCAAGCCTTTGAGATTGCAATTTCACACTATGGGTTCTTACAGCGATAG

Protein sequence

MPLSLLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQARGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPNPSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQR

Homology

[Close]

BLAST of MC09g1664 vs. ExPASy Swiss-Prot
Match: P82195 (50S ribosomal protein L18, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL18 PE=1 SV=3)

HSP 1 Score: 85.1 bits (209), Expect = 8.8e-16
Identity = 53/157 (33.76%), Postives = 86/157 (54.78%), Query Frame = 0


Query: 26  LLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQARGHSKPESAKIRNRRMQKKYNGTPK 85
           L S SS+     S P  F + + +   L    IQA+ H++ E    R+ R++KK  GTP+
Sbjct: 14  LASSSSSSVQQLSLPPKFVNFRPQTLPL----IQAKAHTRREDRTARHVRIRKKVEGTPE 73

Query: 86  RPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPN---PSCTTIEAAQYVGEELVK 145
           RPRL VF S+K LY  ++DD     L   ST+QK++  N    +  T+E AQ +GE + K
Sbjct: 74  RPRLCVFRSNKHLYVQVIDDTKMHTLAAASTMQKAISENIDYSAGPTVEVAQKIGEMIAK 133

Query: 146 TCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFL 180
           +C +  I ++ ++DR G+    +++A   A   +G +
Sbjct: 134 SCLEKGITKV-AFDRGGYPYHGRVKALADAAREHGLV 165

[Close]

BLAST of MC09g1664 vs. ExPASy Swiss-Prot
Match: Q9SX68 (50S ribosomal protein L18, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL18 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-13
Identity = 48/142 (33.80%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 39  KPFNFPSLKSKNCDLKPLIIQARGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQL 98
           KP++  SL+S++     ++++A+  +  E    R+ R++KK NGT +RPRL VF S+K L
Sbjct: 32  KPWSSSSLQSRS-----MVVEAKTKTSSEDRIARHSRIRKKVNGTTERPRLCVFRSNKHL 91

Query: 99  YAMLVDDQNKKCLFYGSTLQKSMRPN---PSCTTIEAAQYVGEELVKTCEDLNIHEISSY 158
           Y  ++DD     L   ST QK +       S  TIE A+ VGE + K+C +  I ++ ++
Sbjct: 92  YVQVIDDTKMHTLASASTKQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEKGITKV-AF 151

Query: 159 DRNGFARGEKMQAFEIAISHYG 178
           DR G+    +++A   A   +G
Sbjct: 152 DRGGYPYHGRIEALAAAAREHG 167

[Close]

BLAST of MC09g1664 vs. ExPASy Swiss-Prot
Match: A9FGF8 (50S ribosomal protein L18 OS=Sorangium cellulosum (strain So ce56) OX=448385 GN=rplR PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.7e-12
Identity = 40/107 (37.38%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 72  RNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPN-PSCTTI 131
           R  R++KK  GTP+RPRLSVF S K +YA ++DD + K L + STL K ++ +      +
Sbjct: 11  RKLRIRKKVEGTPERPRLSVFRSSKHIYAQVIDDVSGKTLAHASTLSKDLKGSLDEDNKV 70

Query: 132 EAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYG 178
           EAA+ VG  + + C++  I ++  +DRNG+    ++ A   A    G
Sbjct: 71  EAAKKVGALIARICKERQIDKV-VFDRNGYLYHGRVSALAQAAREAG 116

[Close]

BLAST of MC09g1664 vs. ExPASy Swiss-Prot
Match: Q8SAY0 (50S ribosomal protein L18, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RPL18 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-11
Identity = 44/118 (37.29%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 64  SKPESAKI-RNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMR 123
           S P++ +I R+ R++KK +GT +RPRLSVF S+K LYA ++DD     L   ST+ KS+ 
Sbjct: 51  STPQADRIARHVRLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTLVSASTMHKSLS 110

Query: 124 PN---PSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYG 178
            +    +  T+E AQ +GE + K+C +  I ++  +DR GF    +++A   A    G
Sbjct: 111 KDLEYSAGPTVEVAQKIGEVIAKSCLEKGITKV-VFDRGGFLYHGRIKALADAARENG 167

[Close]

BLAST of MC09g1664 vs. ExPASy Swiss-Prot
Match: B8E1E9 (50S ribosomal protein L18 OS=Dictyoglomus turgidum (strain DSM 6724 / Z-1310) OX=515635 GN=rplR PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.8e-11
Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 0


Query: 64  SKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRP 123
           S+ E  +IR+ R++KK  GTP+RPRL+V+ S + +YA ++DD     L   S+L+K +R 
Sbjct: 6   SRKELRRIRHLRIRKKITGTPERPRLAVYKSLRYIYAQIIDDTKGHTLVAASSLEKELRS 65

Query: 124 N-PSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQA 169
              S   IEAA+ VGE + K   +  I  +  +DR GF    K++A
Sbjct: 66  QLKSTKNIEAAKLVGEVIAKRALEKGIKRV-VFDRGGFLYHGKVKA 110

[Close]

BLAST of MC09g1664 vs. NCBI nr
Match: XP_022151144.1 (uncharacterized protein LOC111019142 [Momordica charantia] >XP_022151145.1 uncharacterized protein LOC111019142 [Momordica charantia])

HSP 1 Score: 367 bits (943), Expect = 2.77e-128
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MPLSLLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQA 60
           MPLSLLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQA
Sbjct: 1   MPLSLLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQA 60

Query: 61  RGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120
           RGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS
Sbjct: 61  RGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120

Query: 121 MRPNPSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQ 180
           MRPNPSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQ
Sbjct: 121 MRPNPSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQ 180

[Close]

BLAST of MC09g1664 vs. NCBI nr
Match: XP_038891856.1 (50S ribosomal protein L18 isoform X2 [Benincasa hispida])

HSP 1 Score: 317 bits (811), Expect = 3.71e-108
Identity = 156/181 (86.19%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MPLSLLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQA 60
           MP  LLNTL+ +KVYGGM  +N PGLLSK+STPFG QSKPFNFPSLK++NCD+KPL IQA
Sbjct: 1   MPSLLLNTLNLKKVYGGMAFLNGPGLLSKTSTPFGLQSKPFNFPSLKTRNCDVKPLTIQA 60

Query: 61  RGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120
           RG+SK ESAKI NRR+QKKYNGTP RPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS
Sbjct: 61  RGNSKTESAKITNRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120

Query: 121 MRPNPSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQ 180
           MRP+PSCTTIEAAQ+VGEELVK CEDLNIHEISSYDRNGFARGEKMQAFEIAIS YG LQ
Sbjct: 121 MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYGLLQ 180

[Close]

BLAST of MC09g1664 vs. NCBI nr
Match: XP_038891854.1 (50S ribosomal protein L18 isoform X1 [Benincasa hispida] >XP_038891855.1 50S ribosomal protein L18 isoform X1 [Benincasa hispida])

HSP 1 Score: 317 bits (811), Expect = 1.83e-107
Identity = 156/181 (86.19%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MPLSLLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQA 60
           MP  LLNTL+ +KVYGGM  +N PGLLSK+STPFG QSKPFNFPSLK++NCD+KPL IQA
Sbjct: 47  MPSLLLNTLNLKKVYGGMAFLNGPGLLSKTSTPFGLQSKPFNFPSLKTRNCDVKPLTIQA 106

Query: 61  RGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120
           RG+SK ESAKI NRR+QKKYNGTP RPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS
Sbjct: 107 RGNSKTESAKITNRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 166

Query: 121 MRPNPSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQ 180
           MRP+PSCTTIEAAQ+VGEELVK CEDLNIHEISSYDRNGFARGEKMQAFEIAIS YG LQ
Sbjct: 167 MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYGLLQ 226

[Close]

BLAST of MC09g1664 vs. NCBI nr
Match: XP_022987454.1 (uncharacterized protein LOC111484997 [Cucurbita maxima])

HSP 1 Score: 310 bits (793), Expect = 2.05e-105
Identity = 151/181 (83.43%), Postives = 168/181 (92.82%), Query Frame = 0


Query: 1   MPLSLLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQA 60
           MP   LNT++F+KV GGM  +N+PGLLSK+STPF FQSKPFNFPSLK ++CD+KPL+IQA
Sbjct: 1   MPSLPLNTINFEKVNGGMHFLNVPGLLSKTSTPFWFQSKPFNFPSLKRRHCDVKPLMIQA 60

Query: 61  RGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120
           RG+SK ESAK+RNRR+QKKYNG+  +PRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS
Sbjct: 61  RGNSKTESAKVRNRRLQKKYNGSSTKPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120

Query: 121 MRPNPSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQ 180
           MRP+PSCTTIEAAQ+VGEELVK CEDLNIHEISSYDRNGFARGEKMQAFEIAIS YGFLQ
Sbjct: 121 MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYGFLQ 180

[Close]

BLAST of MC09g1664 vs. NCBI nr
Match: XP_023547360.1 (uncharacterized protein LOC111806273 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308 bits (789), Expect = 8.36e-105
Identity = 151/181 (83.43%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MPLSLLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQA 60
           MP   LNT++F+KV GGM  +N+PGLLSK+STPF FQSKPFNFPSLK ++CD+KPL+IQA
Sbjct: 1   MPSLPLNTINFEKVNGGMHFLNVPGLLSKTSTPFWFQSKPFNFPSLKRRHCDVKPLMIQA 60

Query: 61  RGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120
           RG+SK ESAK+RNRR QKKYNG+  +PRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS
Sbjct: 61  RGNSKTESAKVRNRRFQKKYNGSSTKPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120

Query: 121 MRPNPSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQ 180
           MRP+PSCTTIEAAQ+VGEELVK CEDLNIHEISSYDRNGFARGEKMQAFEIAIS YGFLQ
Sbjct: 121 MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISGYGFLQ 180

[Close]

BLAST of MC09g1664 vs. ExPASy TrEMBL
Match: A0A6J1DC55 (uncharacterized protein LOC111019142 OS=Momordica charantia OX=3673 GN=LOC111019142 PE=4 SV=1)

HSP 1 Score: 367 bits (943), Expect = 1.34e-128
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MPLSLLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQA 60
           MPLSLLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQA
Sbjct: 1   MPLSLLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQA 60

Query: 61  RGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120
           RGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS
Sbjct: 61  RGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120

Query: 121 MRPNPSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQ 180
           MRPNPSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQ
Sbjct: 121 MRPNPSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQ 180

[Close]

BLAST of MC09g1664 vs. ExPASy TrEMBL
Match: A0A6J1JIY0 (uncharacterized protein LOC111484997 OS=Cucurbita maxima OX=3661 GN=LOC111484997 PE=4 SV=1)

HSP 1 Score: 310 bits (793), Expect = 9.94e-106
Identity = 151/181 (83.43%), Postives = 168/181 (92.82%), Query Frame = 0


Query: 1   MPLSLLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQA 60
           MP   LNT++F+KV GGM  +N+PGLLSK+STPF FQSKPFNFPSLK ++CD+KPL+IQA
Sbjct: 1   MPSLPLNTINFEKVNGGMHFLNVPGLLSKTSTPFWFQSKPFNFPSLKRRHCDVKPLMIQA 60

Query: 61  RGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120
           RG+SK ESAK+RNRR+QKKYNG+  +PRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS
Sbjct: 61  RGNSKTESAKVRNRRLQKKYNGSSTKPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120

Query: 121 MRPNPSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQ 180
           MRP+PSCTTIEAAQ+VGEELVK CEDLNIHEISSYDRNGFARGEKMQAFEIAIS YGFLQ
Sbjct: 121 MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISRYGFLQ 180

[Close]

BLAST of MC09g1664 vs. ExPASy TrEMBL
Match: A0A6J1GYP6 (uncharacterized protein LOC111458689 OS=Cucurbita moschata OX=3662 GN=LOC111458689 PE=4 SV=1)

HSP 1 Score: 306 bits (784), Expect = 2.34e-104
Identity = 150/181 (82.87%), Postives = 166/181 (91.71%), Query Frame = 0


Query: 1   MPLSLLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQA 60
           MP   LNT++F+KV GGM  +N+PGLLSK+ TPF FQSKPFNFPSLK ++CD+KPL+IQA
Sbjct: 1   MPSLPLNTINFEKVNGGMHFLNVPGLLSKTPTPFWFQSKPFNFPSLKRRHCDVKPLMIQA 60

Query: 61  RGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120
           RG+SK ESAK+RNRR QKKYNG+  +PRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS
Sbjct: 61  RGNSKTESAKVRNRRFQKKYNGSSTKPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKS 120

Query: 121 MRPNPSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQ 180
           MRP+PSCTTIEAAQ+VGEELVK CEDLNIHEISSYDRNGFARGEKMQAFEIAIS YGFLQ
Sbjct: 121 MRPSPSCTTIEAAQHVGEELVKACEDLNIHEISSYDRNGFARGEKMQAFEIAISGYGFLQ 180

[Close]

BLAST of MC09g1664 vs. ExPASy TrEMBL
Match: A0A1S3BEE0 (50S ribosomal protein L18 OS=Cucumis melo OX=3656 GN=LOC103489126 PE=4 SV=1)

HSP 1 Score: 292 bits (748), Expect = 7.16e-99
Identity = 145/177 (81.92%), Postives = 160/177 (90.40%), Query Frame = 0


Query: 5   LLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQARGHS 64
           LLNT +F+KV+GG+   N+ GLL K+S PFG QSK F+F SLK+K+CD+KPL+IQARG+S
Sbjct: 5   LLNTSNFKKVHGGVAFQNVSGLLLKTSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNS 64

Query: 65  KPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPN 124
           K ESAK+RNRR+QKKYNGTP RPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRP 
Sbjct: 65  KTESAKVRNRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPT 124

Query: 125 PSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQR 181
            SCTTIEAAQ+VGEELVK C DLNIHEISSYDRNGFARGEKMQAFEIAIS YGFLQR
Sbjct: 125 LSCTTIEAAQHVGEELVKVCGDLNIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR 181

[Close]

BLAST of MC09g1664 vs. ExPASy TrEMBL
Match: A0A5D3D244 (50S ribosomal protein L18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00380 PE=4 SV=1)

HSP 1 Score: 292 bits (748), Expect = 7.16e-99
Identity = 145/177 (81.92%), Postives = 160/177 (90.40%), Query Frame = 0


Query: 5   LLNTLDFQKVYGGMPLVNLPGLLSKSSTPFGFQSKPFNFPSLKSKNCDLKPLIIQARGHS 64
           LLNT +F+KV+GG+   N+ GLL K+S PFG QSK F+F SLK+K+CD+KPL+IQARG+S
Sbjct: 5   LLNTSNFKKVHGGVAFQNVSGLLLKTSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNS 64

Query: 65  KPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPN 124
           K ESAK+RNRR+QKKYNGTP RPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRP 
Sbjct: 65  KTESAKVRNRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPT 124

Query: 125 PSCTTIEAAQYVGEELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFLQR 181
            SCTTIEAAQ+VGEELVK C DLNIHEISSYDRNGFARGEKMQAFEIAIS YGFLQR
Sbjct: 125 LSCTTIEAAQHVGEELVKVCGDLNIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR 181

[Close]

BLAST of MC09g1664 vs. TAIR 10
Match: AT1G14205.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 185.3 bits (469), Expect = 4.4e-47
Identity = 97/161 (60.25%), Postives = 120/161 (74.53%), Query Frame = 0


Query: 20  LVNLPGLLSKSSTPFGFQSKPF-NFPSLKSKNCDLKPLIIQARGHSKPESAKIRNRRMQK 79
           L +L  +  + S   G + KP+  FP   +    +KP +I+ARG+++ ES K RNRR +K
Sbjct: 4   LTSLSTVQFRVSDILGTRLKPYPQFPIRITTMSVVKPFVIEARGNTRVESPKTRNRRSRK 63

Query: 80  KYNGTPKRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPNPSCTTIEAAQYVGE 139
           K+ GT  +PRLSVFCSDKQLYAMLVDD NKKCLFY STLQKS+R +P CT IEAA+ VGE
Sbjct: 64  KFTGTQTKPRLSVFCSDKQLYAMLVDDFNKKCLFYASTLQKSIRGDPPCTVIEAAKRVGE 123

Query: 140 ELVKTCEDLNIHEISSYDRNGFARGEKMQAFEIAISHYGFL 180
           EL+K   DL I+EISSYDRNG  RGE+MQAFEIAI+ +GFL
Sbjct: 124 ELIKASIDLKINEISSYDRNGNKRGERMQAFEIAIAQHGFL 164

[Close]

BLAST of MC09g1664 vs. TAIR 10
Match: AT1G48350.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 78.2 bits (191), Expect = 7.6e-15
Identity = 48/142 (33.80%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 39  KPFNFPSLKSKNCDLKPLIIQARGHSKPESAKIRNRRMQKKYNGTPKRPRLSVFCSDKQL 98
           KP++  SL+S++     ++++A+  +  E    R+ R++KK NGT +RPRL VF S+K L
Sbjct: 32  KPWSSSSLQSRS-----MVVEAKTKTSSEDRIARHSRIRKKVNGTTERPRLCVFRSNKHL 91

Query: 99  YAMLVDDQNKKCLFYGSTLQKSMRPN---PSCTTIEAAQYVGEELVKTCEDLNIHEISSY 158
           Y  ++DD     L   ST QK +       S  TIE A+ VGE + K+C +  I ++ ++
Sbjct: 92  YVQVIDDTKMHTLASASTKQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEKGITKV-AF 151

Query: 159 DRNGFARGEKMQAFEIAISHYG 178
           DR G+    +++A   A   +G
Sbjct: 152 DRGGYPYHGRIEALAAAAREHG 167

The following BLAST results are available for this feature:

BLAST of MC09g1664 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82195	8.8e-16	33.76	50S ribosomal protein L18, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL18 P...	[more]
Q9SX68	1.1e-13	33.80	50S ribosomal protein L18, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1...	[more]
A9FGF8	7.7e-12	37.38	50S ribosomal protein L18 OS=Sorangium cellulosum (strain So ce56) OX=448385 GN=...	[more]
Q8SAY0	1.0e-11	37.29	50S ribosomal protein L18, chloroplastic OS=Oryza sativa subsp. japonica OX=3994...	[more]
B8E1E9	3.8e-11	38.68	50S ribosomal protein L18 OS=Dictyoglomus turgidum (strain DSM 6724 / Z-1310) OX...	[more]

BLAST of MC09g1664 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151144.1	2.77e-128	100.00	uncharacterized protein LOC111019142 [Momordica charantia] >XP_022151145.1 uncha...	[more]
XP_038891856.1	3.71e-108	86.19	50S ribosomal protein L18 isoform X2 [Benincasa hispida]	[more]
XP_038891854.1	1.83e-107	86.19	50S ribosomal protein L18 isoform X1 [Benincasa hispida] >XP_038891855.1 50S rib...	[more]
XP_022987454.1	2.05e-105	83.43	uncharacterized protein LOC111484997 [Cucurbita maxima]	[more]
XP_023547360.1	8.36e-105	83.43	uncharacterized protein LOC111806273 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC09g1664 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DC55	1.34e-128	100.00	uncharacterized protein LOC111019142 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1JIY0	9.94e-106	83.43	uncharacterized protein LOC111484997 OS=Cucurbita maxima OX=3661 GN=LOC111484997...	[more]
A0A6J1GYP6	2.34e-104	82.87	uncharacterized protein LOC111458689 OS=Cucurbita moschata OX=3662 GN=LOC1114586...	[more]
A0A1S3BEE0	7.16e-99	81.92	50S ribosomal protein L18 OS=Cucumis melo OX=3656 GN=LOC103489126 PE=4 SV=1	[more]
A0A5D3D244	7.16e-99	81.92	50S ribosomal protein L18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of MC09g1664 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14205.1	4.4e-47	60.25	Ribosomal L18p/L5e family protein	[more]
AT1G48350.1	7.6e-15	33.80	Ribosomal L18p/L5e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.420.100		coord: 64..178 e-value: 4.9E-21 score: 77.3
None	No IPR available	PANTHER	PTHR12899:SF8	RIBOSOMAL L18P/L5E FAMILY PROTEIN	coord: 28..181
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 77..178 e-value: 1.21518E-22 score: 85.2843
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 67..174
IPR005484	Ribosomal protein L18	PFAM	PF00861	Ribosomal_L18p	coord: 65..169 e-value: 1.4E-16 score: 60.9
IPR005484	Ribosomal protein L18	PANTHER	PTHR12899	39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL	coord: 28..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g1664.1	MC09g1664.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome