MC09g1662 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g1662
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC09: 22094738 .. 22095166 (+)
RNA-Seq ExpressionMC09g1662
SyntenyMC09g1662
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTGTGTAATGGAAATGGCAGGCCAAACCCAAAACTTTCTCACGATTTTGCTCCTCTCTCTCCTCGTCTCCTTCAACACTGTCTCTGCATCAAGTACACGCCCCCCTCAAACTTTGTTTATTGAAATTACTACCTCTGTAATTCTCAGTTTATCTTGACAGGTTCCTACATTTACAGGGGCTGCAGTTATGATCCACCTTGGCCAAGATTTTCCAGCCTCCCAAGCTGCTCACCAGGTAGAGATATGTAATTATATATGATTGAATCATAACTGACACGTGTATATTATAAGAGATGATTTAAAATTGATGCAATTTCTTCAATGGCAGAAGAATCAGCCACCACAAAAGTTGTTCAATGGCAGAATGGATTTACAGTACGGTGACTATCCAGTTTCTGGAGCTAATCCTCGCCACACTCCAAAGCCA

mRNA sequence

AACTGTGTAATGGAAATGGCAGGCCAAACCCAAAACTTTCTCACGATTTTGCTCCTCTCTCTCCTCGTCTCCTTCAACACTGTCTCTGCATCAAGGGCTGCAGTTATGATCCACCTTGGCCAAGATTTTCCAGCCTCCCAAGCTGCTCACCAGAAGAATCAGCCACCACAAAAGTTGTTCAATGGCAGAATGGATTTACAGTACGGTGACTATCCAGTTTCTGGAGCTAATCCTCGCCACACTCCAAAGCCA

Coding sequence (CDS)

AACTGTGTAATGGAAATGGCAGGCCAAACCCAAAACTTTCTCACGATTTTGCTCCTCTCTCTCCTCGTCTCCTTCAACACTGTCTCTGCATCAAGGGCTGCAGTTATGATCCACCTTGGCCAAGATTTTCCAGCCTCCCAAGCTGCTCACCAGAAGAATCAGCCACCACAAAAGTTGTTCAATGGCAGAATGGATTTACAGTACGGTGACTATCCAGTTTCTGGAGCTAATCCTCGCCACACTCCAAAGCCA

Protein sequence

NCVMEMAGQTQNFLTILLLSLLVSFNTVSASRAAVMIHLGQDFPASQAAHQKNQPPQKLFNGRMDLQYGDYPVSGANPRHTPKP
Homology
BLAST of MC09g1662 vs. NCBI nr
Match: XP_008446367.1 (PREDICTED: uncharacterized protein LOC103489129 [Cucumis melo])

HSP 1 Score: 125 bits (314), Expect = 4.11e-35
Identity = 63/86 (73.26%), Postives = 74/86 (86.05%), Query Frame = 0

Query: 1   NCVMEMAGQTQNF-LTILLLSLLVSF-NTVSASRAAVMIHLGQDFPASQAAHQKNQPPQK 60
           NCVM+MA QTQ+  ++ LLLSLL+ F NTVSASRA  M+HLGQDFPASQAA+QKNQPP+ 
Sbjct: 23  NCVMKMADQTQHLVMSFLLLSLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPEN 82

Query: 61  LFNGRMDLQYGDYPVSGANPRHTPKP 84
           L+NGRMDLQ+ DY + GANPRHTPKP
Sbjct: 83  LWNGRMDLQFNDYQIFGANPRHTPKP 108

BLAST of MC09g1662 vs. NCBI nr
Match: KAA0034426.1 (putative lipoprotein yfhM [Cucumis melo var. makuwa] >TYK17708.1 putative lipoprotein yfhM [Cucumis melo var. makuwa])

HSP 1 Score: 116 bits (290), Expect = 8.45e-32
Identity = 59/81 (72.84%), Postives = 69/81 (85.19%), Query Frame = 0

Query: 6  MAGQTQNF-LTILLLSLLVSF-NTVSASRAAVMIHLGQDFPASQAAHQKNQPPQKLFNGR 65
          MA QTQ+  ++ LLLSLL+ F NTVSASRA  M+HLGQDFPASQAA+QKNQPP+ L+NGR
Sbjct: 1  MADQTQHLVMSFLLLSLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPENLWNGR 60

Query: 66 MDLQYGDYPVSGANPRHTPKP 84
          MDLQ+ DY + GANPRHTPKP
Sbjct: 61 MDLQFNDYQIFGANPRHTPKP 81

BLAST of MC09g1662 vs. NCBI nr
Match: KGN51928.1 (hypothetical protein Csa_009059 [Cucumis sativus])

HSP 1 Score: 110 bits (275), Expect = 1.63e-29
Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 0

Query: 6  MAGQTQNF-LTILLLSLLVSF-NTVSASRAAVMIHLGQDFPASQAAHQKNQPPQKLFNGR 65
          MA QTQ+  ++  L+SLL+ F NTVSASRA VMIHLGQDFPASQA +QKNQP + L+NGR
Sbjct: 1  MADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQATNQKNQPLENLWNGR 60

Query: 66 MDLQYGDYPVSGANPRHTPKP 84
          MDLQ+ DY + GANPRHTPKP
Sbjct: 61 MDLQFNDYQIFGANPRHTPKP 81

BLAST of MC09g1662 vs. NCBI nr
Match: KAG7032221.1 (hypothetical protein SDJN02_06264, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105 bits (263), Expect = 9.30e-28
Identity = 59/80 (73.75%), Postives = 63/80 (78.75%), Query Frame = 0

Query: 6  MAGQTQNFLTIL-LLSLLVSFNTVSASRAAVMIHLGQDFPASQAAHQKNQPPQKLFNGRM 65
          MAGQTQ+FL +L LLSLL     +SAS AA+MIHLGQDF ASQAAHQ  QP QKL N RM
Sbjct: 1  MAGQTQHFLMVLILLSLL-----LSASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRM 60

Query: 66 DLQYGDYPVSGANPRHTPKP 84
          DLQY DYPVS AN RHTPKP
Sbjct: 61 DLQYNDYPVSEANHRHTPKP 75

BLAST of MC09g1662 vs. NCBI nr
Match: KAG6601439.1 (hypothetical protein SDJN03_06672, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.1 bits (240), Expect = 2.33e-24
Identity = 51/71 (71.83%), Postives = 56/71 (78.87%), Query Frame = 0

Query: 14 LTILLLSLLVSFNTVSASRAAVMIHLGQDFPASQAAHQKNQPPQKLFNGRMDLQYGDYPV 73
          + ++LLSLL     +SAS AA+MIHLGQDF ASQAAHQK QP QKL N RMDLQY DYPV
Sbjct: 1  MVLILLSLL-----LSASGAAIMIHLGQDFSASQAAHQKKQPLQKLLNDRMDLQYNDYPV 60

Query: 74 SGANPRHTPKP 84
          S AN RHTPKP
Sbjct: 61 SEANHRHTPKP 66

BLAST of MC09g1662 vs. ExPASy TrEMBL
Match: A0A1S3BEE6 (uncharacterized protein LOC103489129 OS=Cucumis melo OX=3656 GN=LOC103489129 PE=4 SV=1)

HSP 1 Score: 125 bits (314), Expect = 1.99e-35
Identity = 63/86 (73.26%), Postives = 74/86 (86.05%), Query Frame = 0

Query: 1   NCVMEMAGQTQNF-LTILLLSLLVSF-NTVSASRAAVMIHLGQDFPASQAAHQKNQPPQK 60
           NCVM+MA QTQ+  ++ LLLSLL+ F NTVSASRA  M+HLGQDFPASQAA+QKNQPP+ 
Sbjct: 23  NCVMKMADQTQHLVMSFLLLSLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPEN 82

Query: 61  LFNGRMDLQYGDYPVSGANPRHTPKP 84
           L+NGRMDLQ+ DY + GANPRHTPKP
Sbjct: 83  LWNGRMDLQFNDYQIFGANPRHTPKP 108

BLAST of MC09g1662 vs. ExPASy TrEMBL
Match: A0A5A7SX31 (Putative lipoprotein yfhM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00360 PE=4 SV=1)

HSP 1 Score: 116 bits (290), Expect = 4.09e-32
Identity = 59/81 (72.84%), Postives = 69/81 (85.19%), Query Frame = 0

Query: 6  MAGQTQNF-LTILLLSLLVSF-NTVSASRAAVMIHLGQDFPASQAAHQKNQPPQKLFNGR 65
          MA QTQ+  ++ LLLSLL+ F NTVSASRA  M+HLGQDFPASQAA+QKNQPP+ L+NGR
Sbjct: 1  MADQTQHLVMSFLLLSLLIIFFNTVSASRATFMVHLGQDFPASQAANQKNQPPENLWNGR 60

Query: 66 MDLQYGDYPVSGANPRHTPKP 84
          MDLQ+ DY + GANPRHTPKP
Sbjct: 61 MDLQFNDYQIFGANPRHTPKP 81

BLAST of MC09g1662 vs. ExPASy TrEMBL
Match: A0A0A0KQN6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605220 PE=4 SV=1)

HSP 1 Score: 110 bits (275), Expect = 7.91e-30
Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 0

Query: 6  MAGQTQNF-LTILLLSLLVSF-NTVSASRAAVMIHLGQDFPASQAAHQKNQPPQKLFNGR 65
          MA QTQ+  ++  L+SLL+ F NTVSASRA VMIHLGQDFPASQA +QKNQP + L+NGR
Sbjct: 1  MADQTQHLVMSFFLVSLLIIFFNTVSASRATVMIHLGQDFPASQATNQKNQPLENLWNGR 60

Query: 66 MDLQYGDYPVSGANPRHTPKP 84
          MDLQ+ DY + GANPRHTPKP
Sbjct: 61 MDLQFNDYQIFGANPRHTPKP 81

BLAST of MC09g1662 vs. ExPASy TrEMBL
Match: A0A7N2LBG0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.51e-10
Identity = 35/90 (38.89%), Postives = 52/90 (57.78%), Query Frame = 0

Query: 2  CVMEMAGQTQNFLTILLLSLLVSFNTVSA----SRAAVMIHLGQDFPASQAAHQ---KNQ 61
          C+M MAG T + L I+L+ +  +F  + A     R   ++H  QD  AS++ H+   K  
Sbjct: 8  CLMRMAGNTLHLLLIILILVFSNFFFLDAVPILPRGRSLLHASQDIVASRSIHRASTKQY 67

Query: 62 PPQKLFNGRMDLQYGDYPVSGANPRHTPKP 84
            ++L +GR DL++ DYP SGAN  HTP P
Sbjct: 68 EEEELTHGRNDLEFTDYPGSGANNHHTPTP 97

BLAST of MC09g1662 vs. ExPASy TrEMBL
Match: B9S8Y1 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0836660 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.76e-08
Identity = 29/64 (45.31%), Postives = 36/64 (56.25%), Query Frame = 0

Query: 21 LLVSFNTVSASRAAVMIHLGQDFPASQAAHQKNQPPQKLFNGRMDLQYGDYPVSGANPRH 80
          LL S N  S SRA  + H GQ  P+S   +   Q  +KL NGR D++  DY  SG N  H
Sbjct: 20 LLFSLNAASTSRANELFHGGQHVPSSSFENTYLQRMRKLGNGRKDIEVNDYSESGPNKSH 79

Query: 81 TPKP 84
          TP+P
Sbjct: 80 TPEP 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_008446367.14.11e-3573.26PREDICTED: uncharacterized protein LOC103489129 [Cucumis melo][more]
KAA0034426.18.45e-3272.84putative lipoprotein yfhM [Cucumis melo var. makuwa] >TYK17708.1 putative lipopr... [more]
KGN51928.11.63e-2970.37hypothetical protein Csa_009059 [Cucumis sativus][more]
KAG7032221.19.30e-2873.75hypothetical protein SDJN02_06264, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6601439.12.33e-2471.83hypothetical protein SDJN03_06672, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A1S3BEE61.99e-3573.26uncharacterized protein LOC103489129 OS=Cucumis melo OX=3656 GN=LOC103489129 PE=... [more]
A0A5A7SX314.09e-3272.84Putative lipoprotein yfhM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A0A0KQN67.91e-3070.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605220 PE=4 SV=1[more]
A0A7N2LBG03.51e-1038.89Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
B9S8Y14.76e-0845.31Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0836660 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g1662.1MC09g1662.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane