MC09g1362 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g1362
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	proline-rich receptor-like protein kinase PERK10
Location	MC09: 19695973 .. 19696383 (-)
RNA-Seq Expression	MC09g1362
Synteny	MC09g1362

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCCGCCACCCCCGTCCAACGGGACCGACACTCCACCTCCGCCACCCCCGTCCAACGGCACCGATGCTCCGCCTCCGCCACCCCCATCCAATGGAACCGATGCTCCACCTCCGCCACCACCGTCGTCGAACGGGACGGACTCCTCTCCACCGCCACCACCGAATGTCAACATCTCACCACCTGCGCCAGATGTTGGTTCATCTCCGCCGCCGGCGCCAAGCACACAGCTACCGTTGAATGAAAAGGGTGGCGCAGATTCAAAAGGGCTGAGTGGTGGACAAAAGGCAGGTATCGCCTTAGGAGTGATTGCAGGAGCAGGTTTGTTGGGATTTGTAGGATTGATTTGCATGAAACGACGTAGTAATAGCATGAGAAGCCATTATGGATATGGTGCAAGAGACGCGATGCTT

mRNA sequence

CCTCCGCCACCCCCGTCCAACGGGACCGACACTCCACCTCCGCCACCCCCGTCCAACGGCACCGATGCTCCGCCTCCGCCACCCCCATCCAATGGAACCGATGCTCCACCTCCGCCACCACCGTCGTCGAACGGGACGGACTCCTCTCCACCGCCACCACCGAATGTCAACATCTCACCACCTGCGCCAGATGTTGGTTCATCTCCGCCGCCGGCGCCAAGCACACAGCTACCGTTGAATGAAAAGGGTGGCGCAGATTCAAAAGGGCTGAGTGGTGGACAAAAGGCAGGTATCGCCTTAGGAGTGATTGCAGGAGCAGGTTTGTTGGGATTTGTAGGATTGATTTGCATGAAACGACGTAGTAATAGCATGAGAAGCCATTATGGATATGGTGCAAGAGACGCGATGCTT

Coding sequence (CDS)

CCTCCGCCACCCCCGTCCAACGGGACCGACACTCCACCTCCGCCACCCCCGTCCAACGGCACCGATGCTCCGCCTCCGCCACCCCCATCCAATGGAACCGATGCTCCACCTCCGCCACCACCGTCGTCGAACGGGACGGACTCCTCTCCACCGCCACCACCGAATGTCAACATCTCACCACCTGCGCCAGATGTTGGTTCATCTCCGCCGCCGGCGCCAAGCACACAGCTACCGTTGAATGAAAAGGGTGGCGCAGATTCAAAAGGGCTGAGTGGTGGACAAAAGGCAGGTATCGCCTTAGGAGTGATTGCAGGAGCAGGTTTGTTGGGATTTGTAGGATTGATTTGCATGAAACGACGTAGTAATAGCATGAGAAGCCATTATGGATATGGTGCAAGAGACGCGATGCTT

Protein sequence

PPPPPSNGTDTPPPPPPSNGTDAPPPPPPSNGTDAPPPPPPSSNGTDSSPPPPPNVNISPPAPDVGSSPPPAPSTQLPLNEKGGADSKGLSGGQKAGIALGVIAGAGLLGFVGLICMKRRSNSMRSHYGYGARDAML

Homology

[Close]

BLAST of MC09g1362 vs. NCBI nr
Match: XP_022139212.1 (formin-like protein 20 [Momordica charantia])

HSP 1 Score: 245 bits (625), Expect = 1.73e-78
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   PPPPPSNGTDTPPPPPPSNGTDAPPPPPPSNGTDAPPPPPPSSNGTDSSPPPPPNVNISP 60
           PPPPPSNGTDTPPPPPPSNGTDAPPPPPPSNGTDAPPPPPPSSNGTDSSPPPPPNVNISP
Sbjct: 195 PPPPPSNGTDTPPPPPPSNGTDAPPPPPPSNGTDAPPPPPPSSNGTDSSPPPPPNVNISP 254

Query: 61  PAPDVGSSPPPAPSTQLPLNEKGGADSKGLSGGQKAGIALGVIAGAGLLGFVGLICMKRR 120
           PAPDVGSSPPPAPSTQLPLNEKGGADSKGLSGGQKAGIALGVIAGAGLLGFVGLICMKRR
Sbjct: 255 PAPDVGSSPPPAPSTQLPLNEKGGADSKGLSGGQKAGIALGVIAGAGLLGFVGLICMKRR 314

Query: 121 SNSMRSHYGYGARDAML 137
           SNSMRSHYGYGARDAML
Sbjct: 315 SNSMRSHYGYGARDAML 331

[Close]

BLAST of MC09g1362 vs. NCBI nr
Match: XP_038891654.1 (proline-rich receptor-like protein kinase PERK2 [Benincasa hispida])

HSP 1 Score: 177 bits (449), Expect = 4.91e-53
Identity = 110/140 (78.57%), Postives = 117/140 (83.57%), Query Frame = 0


Query: 1   PPPPPSNGTDTPPPPPPSNGTDAPPPPPPSNGTDAPPPPPPSSNGTDSSPPPPPN-VNIS 60
           PPPPPSN TDTPPPPPPSN TD PPPPPPSN TDAPPPPPPS N TD+ PPPPP+   + 
Sbjct: 101 PPPPPSNTTDTPPPPPPSNTTDTPPPPPPSNTTDAPPPPPPS-NTTDTQPPPPPDSTTVP 160

Query: 61  PPAP--DVGSSPPPAPSTQLPLNEKGGADSKGLSGGQKAGIALGVIAGAGLLGFVGLICM 120
           PPAP  +VGSSPPPAP T   LNEKGG DSKGLSGGQKAGIA GVI GAGLLGFVGLIC+
Sbjct: 161 PPAPPPNVGSSPPPAPQTNEALNEKGGGDSKGLSGGQKAGIAFGVIVGAGLLGFVGLICI 220

Query: 121 KRRSNSMRSHYGYGARDAML 137
           KRRSNS +S YGY ARD+ML
Sbjct: 221 KRRSNSRKSRYGYAARDSML 239

[Close]

BLAST of MC09g1362 vs. NCBI nr
Match: KAA0034727.1 (neural Wiskott-Aldrich syndrome protein-like [Cucumis melo var. makuwa] >TYK09280.1 neural Wiskott-Aldrich syndrome protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 152 bits (383), Expect = 8.29e-43
Identity = 104/150 (69.33%), Postives = 112/150 (74.67%), Query Frame = 0


Query: 1   PPPPPSNGTDTPPPPPPSNGTDAPPPPPPSNGTDAPPPPP--------PSSNGTDSSPPP 60
           PPPPPSN TDTPPPPPPSN TD PPPPPPSN TD PPPPP        P SN T+SSPPP
Sbjct: 114 PPPPPSNTTDTPPPPPPSNTTDTPPPPPPSNTTDTPPPPPSNTTDTPPPPSNTTNSSPPP 173

Query: 61  PPNVN---ISPPAP--DVGSSPPPAPSTQLPLNEKGGADSKGLSGGQKAGIALGVIAGAG 120
           PP  N   I PPAP  ++GSSPPP+      L EKG   SKGLSGGQKAGIA GVIAG G
Sbjct: 174 PPPPNSTIILPPAPPPNMGSSPPPSSEA---LKEKGVGGSKGLSGGQKAGIAFGVIAGVG 233

Query: 121 LLGFVGLICMKRRSNSMRSHYGYGARDAML 137
           LLGFVGLIC+KRRSN+ RS YGY ARD++L
Sbjct: 234 LLGFVGLICIKRRSNARRSRYGYAARDSIL 260

[Close]

BLAST of MC09g1362 vs. NCBI nr
Match: XP_003599945.1 (vegetative cell wall protein gp1 [Medicago truncatula] >AES70196.1 transmembrane protein, putative [Medicago truncatula])

HSP 1 Score: 69.7 bits (169), Expect = 5.62e-12
Identity = 42/87 (48.28%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 52  PPPNVNISPPAPDVGSSPPPAPSTQLPLNEKGG-ADSKGLSGGQKAGIALGVIAGAGLLG 111
           PPPN     P P   SSPPP P+   P     G   S GLSGGQKAGI +G + GA +LG
Sbjct: 58  PPPNSPPPAPVPSPISSPPPNPNAPEPEPTAAGQGGSSGLSGGQKAGIVIGTLLGAAILG 117

Query: 112 FVGLICMKRRSNSMRSHYGYGARDAML 137
           F+G++C KRR N  R+ Y   AR+  L
Sbjct: 118 FIGMVCWKRRVNIRRNRYSDAARNIEL 144

[Close]

BLAST of MC09g1362 vs. NCBI nr
Match: RHN67000.1 (hypothetical protein MtrunA17_Chr3g0097921 [Medicago truncatula])

HSP 1 Score: 69.7 bits (169), Expect = 7.00e-12
Identity = 42/87 (48.28%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 52  PPPNVNISPPAPDVGSSPPPAPSTQLPLNEKGG-ADSKGLSGGQKAGIALGVIAGAGLLG 111
           PPPN     P P   SSPPP P+   P     G   S GLSGGQKAGI +G + GA +LG
Sbjct: 68  PPPNSPPPAPVPSPISSPPPNPNAPEPEPTAAGQGGSSGLSGGQKAGIVIGTLLGAAILG 127

Query: 112 FVGLICMKRRSNSMRSHYGYGARDAML 137
           F+G++C KRR N  R+ Y   AR+  L
Sbjct: 128 FIGMVCWKRRVNIRRNRYSDAARNIEL 154

[Close]

BLAST of MC09g1362 vs. ExPASy TrEMBL
Match: A0A6J1CDD2 (formin-like protein 20 OS=Momordica charantia OX=3673 GN=LOC111010181 PE=4 SV=1)

HSP 1 Score: 245 bits (625), Expect = 8.37e-79
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   PPPPPSNGTDTPPPPPPSNGTDAPPPPPPSNGTDAPPPPPPSSNGTDSSPPPPPNVNISP 60
           PPPPPSNGTDTPPPPPPSNGTDAPPPPPPSNGTDAPPPPPPSSNGTDSSPPPPPNVNISP
Sbjct: 195 PPPPPSNGTDTPPPPPPSNGTDAPPPPPPSNGTDAPPPPPPSSNGTDSSPPPPPNVNISP 254

Query: 61  PAPDVGSSPPPAPSTQLPLNEKGGADSKGLSGGQKAGIALGVIAGAGLLGFVGLICMKRR 120
           PAPDVGSSPPPAPSTQLPLNEKGGADSKGLSGGQKAGIALGVIAGAGLLGFVGLICMKRR
Sbjct: 255 PAPDVGSSPPPAPSTQLPLNEKGGADSKGLSGGQKAGIALGVIAGAGLLGFVGLICMKRR 314

Query: 121 SNSMRSHYGYGARDAML 137
           SNSMRSHYGYGARDAML
Sbjct: 315 SNSMRSHYGYGARDAML 331

[Close]

BLAST of MC09g1362 vs. ExPASy TrEMBL
Match: A0A5D3CD81 (Neural Wiskott-Aldrich syndrome protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002750 PE=4 SV=1)

HSP 1 Score: 152 bits (383), Expect = 4.01e-43
Identity = 104/150 (69.33%), Postives = 112/150 (74.67%), Query Frame = 0


Query: 1   PPPPPSNGTDTPPPPPPSNGTDAPPPPPPSNGTDAPPPPP--------PSSNGTDSSPPP 60
           PPPPPSN TDTPPPPPPSN TD PPPPPPSN TD PPPPP        P SN T+SSPPP
Sbjct: 114 PPPPPSNTTDTPPPPPPSNTTDTPPPPPPSNTTDTPPPPPSNTTDTPPPPSNTTNSSPPP 173

Query: 61  PPNVN---ISPPAP--DVGSSPPPAPSTQLPLNEKGGADSKGLSGGQKAGIALGVIAGAG 120
           PP  N   I PPAP  ++GSSPPP+      L EKG   SKGLSGGQKAGIA GVIAG G
Sbjct: 174 PPPPNSTIILPPAPPPNMGSSPPPSSEA---LKEKGVGGSKGLSGGQKAGIAFGVIAGVG 233

Query: 121 LLGFVGLICMKRRSNSMRSHYGYGARDAML 137
           LLGFVGLIC+KRRSN+ RS YGY ARD++L
Sbjct: 234 LLGFVGLICIKRRSNARRSRYGYAARDSIL 260

[Close]

BLAST of MC09g1362 vs. ExPASy TrEMBL
Match: G7J199 (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=11430843 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.72e-12
Identity = 42/87 (48.28%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 52  PPPNVNISPPAPDVGSSPPPAPSTQLPLNEKGG-ADSKGLSGGQKAGIALGVIAGAGLLG 111
           PPPN     P P   SSPPP P+   P     G   S GLSGGQKAGI +G + GA +LG
Sbjct: 58  PPPNSPPPAPVPSPISSPPPNPNAPEPEPTAAGQGGSSGLSGGQKAGIVIGTLLGAAILG 117

Query: 112 FVGLICMKRRSNSMRSHYGYGARDAML 137
           F+G++C KRR N  R+ Y   AR+  L
Sbjct: 118 FIGMVCWKRRVNIRRNRYSDAARNIEL 144

[Close]

BLAST of MC09g1362 vs. ExPASy TrEMBL
Match: A0A396INW4 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr3g0097921 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.39e-12
Identity = 42/87 (48.28%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 52  PPPNVNISPPAPDVGSSPPPAPSTQLPLNEKGG-ADSKGLSGGQKAGIALGVIAGAGLLG 111
           PPPN     P P   SSPPP P+   P     G   S GLSGGQKAGI +G + GA +LG
Sbjct: 68  PPPNSPPPAPVPSPISSPPPNPNAPEPEPTAAGQGGSSGLSGGQKAGIVIGTLLGAAILG 127

Query: 112 FVGLICMKRRSNSMRSHYGYGARDAML 137
           F+G++C KRR N  R+ Y   AR+  L
Sbjct: 128 FIGMVCWKRRVNIRRNRYSDAARNIEL 154

[Close]

BLAST of MC09g1362 vs. ExPASy TrEMBL
Match: A0A3S3NQH6 (Uncharacterized protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02607300 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.18e-12
Identity = 60/132 (45.45%), Postives = 74/132 (56.06%), Query Frame = 0


Query: 29  PSNGTDAPPPPPPS-------SNGTDSSPPPP-PNVNISPPAPDV-----GSSPPPAP-- 88
           P++G D+PPP  PS       S+   S PP P P+ + SPPAP+      GS P PAP  
Sbjct: 33  PNSGGDSPPPDAPSPLQPFTPSSSPPSEPPAPFPSPDASPPAPEAPGPAPGSIPSPAPVP 92

Query: 89  -----STQLPLNEKGGAD---SKGLSGGQKAGIALGVIAGAGLLGFVGLICMKRRSNSMR 137
                S   P +  GG+D   S GL GGQKAGIALGVI G G++G  G +  KR+ N  R
Sbjct: 93  APNGGSDVEPQDISGGSDESSSGGLKGGQKAGIALGVIVGVGIVGVGGFVYKKRQENIRR 152

The following BLAST results are available for this feature:

BLAST of MC09g1362 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g1362 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139212.1	1.73e-78	100.00	formin-like protein 20 [Momordica charantia]	[more]
XP_038891654.1	4.91e-53	78.57	proline-rich receptor-like protein kinase PERK2 [Benincasa hispida]	[more]
KAA0034727.1	8.29e-43	69.33	neural Wiskott-Aldrich syndrome protein-like [Cucumis melo var. makuwa] >TYK0928...	[more]
XP_003599945.1	5.62e-12	48.28	vegetative cell wall protein gp1 [Medicago truncatula] >AES70196.1 transmembrane...	[more]
RHN67000.1	7.00e-12	48.28	hypothetical protein MtrunA17_Chr3g0097921 [Medicago truncatula]	[more]

BLAST of MC09g1362 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CDD2	8.37e-79	100.00	formin-like protein 20 OS=Momordica charantia OX=3673 GN=LOC111010181 PE=4 SV=1	[more]
A0A5D3CD81	4.01e-43	69.33	Neural Wiskott-Aldrich syndrome protein-like OS=Cucumis melo var. makuwa OX=1194...	[more]
G7J199	2.72e-12	48.28	Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=11430843 PE=4 ...	[more]
A0A396INW4	3.39e-12	48.28	Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr3g0097921 ...	[more]
A0A3S3NQH6	4.18e-12	45.45	Uncharacterized protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_...	[more]

BLAST of MC09g1362 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g1362.1	MC09g1362.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane