MC09g1122 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g1122
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	NADH-ubiquinone oxidoreductase chain 1
Location	MC09: 17217826 .. 17217927 (-)
RNA-Seq Expression	MC09g1122
Synteny	MC09g1122

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGCAACGTCGAAAGGGTCCTGATGTAGTGGGATCGTTCGGATTGTTACAACCTCTAGCAGATGGTTTGAAATTGATTCTAAAAGAACAGATGAATCGGTCG

mRNA sequence

GTGCAACGTCGAAAGGGTCCTGATGTAGTGGGATCGTTCGGATTGTTACAACCTCTAGCAGATGGTTTGAAATTGATTCTAAAAGAACAGATGAATCGGTCG

Coding sequence (CDS)

GTGCAACGTCGAAAGGGTCCTGATGTAGTGGGATCGTTCGGATTGTTACAACCTCTAGCAGATGGTTTGAAATTGATTCTAAAAGAACAGATGAATCGGTCG

Protein sequence

VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS

Homology

[Close]

BLAST of MC09g1122 vs. ExPASy Swiss-Prot
Match: P92558 (NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana OX=3702 GN=ND1 PE=1 SV=4)

HSP 1 Score: 62.8 bits (151), Expect = 8.8e-10
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 35
          VQRRKGPDVVGSFGLLQPLADGLKLILKE ++ S
Sbjct: 34 VQRRKGPDVVGSFGLLQPLADGLKLILKEPISPS 67

[Close]

BLAST of MC09g1122 vs. ExPASy Swiss-Prot
Match: P31839 (NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana OX=3950 GN=ND1 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.8e-10
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 35
          VQRRKGPDVVGSFGLLQPLADGLKLILKE ++ S
Sbjct: 40 VQRRKGPDVVGSFGLLQPLADGLKLILKEPISPS 73

[Close]

BLAST of MC09g1122 vs. ExPASy Swiss-Prot
Match: Q01300 (NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida OX=4102 GN=ND1 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.8e-10
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 35
          VQRRKGPDVVGSFGLLQPLADGLKLILKE ++ S
Sbjct: 34 VQRRKGPDVVGSFGLLQPLADGLKLILKEPISPS 67

[Close]

BLAST of MC09g1122 vs. ExPASy Swiss-Prot
Match: Q01148 (NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum OX=4565 GN=ND1 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.8e-10
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 35
          VQRRKGPDVVGSFGLLQPLADGLKLILKE ++ S
Sbjct: 34 VQRRKGPDVVGSFGLLQPLADGLKLILKEPISPS 67

[Close]

BLAST of MC09g1122 vs. ExPASy Swiss-Prot
Match: P48898 (NADH-ubiquinone oxidoreductase chain 1 OS=Chondrus crispus OX=2769 GN=ND1 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.3e-07
Identity = 23/29 (79.31%), Postives = 27/29 (93.10%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKE 30
          +QRRKGP++VG FGLLQPLADGLKL +KE
Sbjct: 35 IQRRKGPNIVGVFGLLQPLADGLKLFVKE 63

[Close]

BLAST of MC09g1122 vs. NCBI nr
Match: AFK49321.1 (unknown [Lotus japonicus])

HSP 1 Score: 61.6 bits (148), Expect = 5.24e-11
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 34
          VQRRKGPDVVGSFGLLQPLADGLKLILKE ++ S
Sbjct: 4  VQRRKGPDVVGSFGLLQPLADGLKLILKEPISPS 37

[Close]

BLAST of MC09g1122 vs. NCBI nr
Match: KAG6621639.1 (hypothetical protein I3842_Q005600, partial [Carya illinoinensis])

HSP 1 Score: 61.6 bits (148), Expect = 5.50e-11
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 34
          VQRRKGPDVVGSFGLLQPLADGLKLILKE ++ S
Sbjct: 4  VQRRKGPDVVGSFGLLQPLADGLKLILKEPISPS 37

[Close]

BLAST of MC09g1122 vs. NCBI nr
Match: XP_025658107.1 (uncharacterized protein LOC112754623 [Arachis hypogaea])

HSP 1 Score: 61.6 bits (148), Expect = 5.64e-11
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 34
          VQRRKGPDVVGSFGLLQPLADGLKLILKE ++ S
Sbjct: 4  VQRRKGPDVVGSFGLLQPLADGLKLILKEPISPS 37

[Close]

BLAST of MC09g1122 vs. NCBI nr
Match: XP_025881931.1 (uncharacterized protein LOC107276733 [Oryza sativa Japonica Group])

HSP 1 Score: 61.6 bits (148), Expect = 5.92e-11
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 34
          VQRRKGPDVVGSFGLLQPLADGLKLILKE ++ S
Sbjct: 4  VQRRKGPDVVGSFGLLQPLADGLKLILKEPISPS 37

[Close]

BLAST of MC09g1122 vs. NCBI nr
Match: XP_042414854.1 (NADH-ubiquinone oxidoreductase chain 1-like [Zingiber officinale])

HSP 1 Score: 61.6 bits (148), Expect = 6.21e-11
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 34
          VQRRKGPDVVGSFGLLQPLADGLKLILKE ++ S
Sbjct: 4  VQRRKGPDVVGSFGLLQPLADGLKLILKEPISPS 37

[Close]

BLAST of MC09g1122 vs. ExPASy TrEMBL
Match: I3T9X9 (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.54e-11
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 34
          VQRRKGPDVVGSFGLLQPLADGLKLILKE ++ S
Sbjct: 4  VQRRKGPDVVGSFGLLQPLADGLKLILKEPISPS 37

[Close]

BLAST of MC09g1122 vs. ExPASy TrEMBL
Match: A0A6N2L2K9 (Uncharacterized protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS169388 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.84e-11
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 34
          VQRRKGPDVVGSFGLLQP+ADGLKLILKE ++ S
Sbjct: 4  VQRRKGPDVVGSFGLLQPIADGLKLILKEPISPS 37

[Close]

BLAST of MC09g1122 vs. ExPASy TrEMBL
Match: A0A6A4MSF1 (NADH-ubiquinone oxidoreductase chain 1 OS=Lupinus albus OX=3870 GN=Lalb_Chr00c21g0405731 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.01e-11
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 34
          VQRRKGPDVVGSFGLLQPLADGLKLILKE ++ S
Sbjct: 4  VQRRKGPDVVGSFGLLQPLADGLKLILKEPISPS 37

[Close]

BLAST of MC09g1122 vs. ExPASy TrEMBL
Match: A0A6P6FU67 (uncharacterized protein LOC112490030 OS=Ziziphus jujuba OX=326968 GN=LOC112490030 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.01e-11
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 34
          VQRRKGPDVVGSFGLLQPLADGLKLILKE ++ S
Sbjct: 4  VQRRKGPDVVGSFGLLQPLADGLKLILKEPISPS 37

[Close]

BLAST of MC09g1122 vs. ExPASy TrEMBL
Match: A0A386JNF6 (NADH-ubiquinone oxidoreductase chain 1 OS=Glycine soja OX=3848 GN=nad1 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.01e-11
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 34
          VQRRKGPDVVGSFGLLQPLADGLKLILKE ++ S
Sbjct: 4  VQRRKGPDVVGSFGLLQPLADGLKLILKEPISPS 37

[Close]

BLAST of MC09g1122 vs. TAIR 10
Match: AT2G07785.1 (NADH dehydrogenase family protein )

HSP 1 Score: 60.5 bits (145), Expect = 3.1e-10
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 35
          VQRRKGPDVVGSFGLLQPLADG KLILKE ++ S
Sbjct: 4  VQRRKGPDVVGSFGLLQPLADGSKLILKEPISPS 37

[Close]

BLAST of MC09g1122 vs. TAIR 10
Match: ATMG01120.1 (NADH dehydrogenase 1B )

HSP 1 Score: 60.5 bits (145), Expect = 3.1e-10
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 35
          VQRRKGPDVVGSFGLLQPLADG KLILKE ++ S
Sbjct: 34 VQRRKGPDVVGSFGLLQPLADGSKLILKEPISPS 67

[Close]

BLAST of MC09g1122 vs. TAIR 10
Match: ATMG00516.1 (NADH dehydrogenase 1C )

HSP 1 Score: 60.5 bits (145), Expect = 3.1e-10
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 35
          VQRRKGPDVVGSFGLLQPLADG KLILKE ++ S
Sbjct: 34 VQRRKGPDVVGSFGLLQPLADGSKLILKEPISPS 67

[Close]

BLAST of MC09g1122 vs. TAIR 10
Match: ATMG01275.1 (NADH dehydrogenase 1A )

HSP 1 Score: 60.5 bits (145), Expect = 3.1e-10
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 35
          VQRRKGPDVVGSFGLLQPLADG KLILKE ++ S
Sbjct: 34 VQRRKGPDVVGSFGLLQPLADGSKLILKEPISPS 67

[Close]

BLAST of MC09g1122 vs. TAIR 10
Match: ATCG01100.1 (NADH dehydrogenase family protein )

HSP 1 Score: 40.8 bits (94), Expect = 2.5e-04
Identity = 17/34 (50.00%), Postives = 23/34 (67.65%), Query Frame = 0


Query: 1  VQRRKGPDVVGSFGLLQPLADGLKLILKEQMNRS 35
          +Q+R GP+  G  G+LQ LADG KL+ KE +  S
Sbjct: 58 IQQRIGPEYAGPLGILQALADGTKLLFKENLRPS 91

The following BLAST results are available for this feature:

BLAST of MC09g1122 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92558	8.8e-10	88.24	NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana OX=3702 GN=ND1 PE...	[more]
P31839	8.8e-10	88.24	NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana OX=3950 GN=ND1 PE...	[more]
Q01300	8.8e-10	88.24	NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida OX=4102 GN=ND1 PE=3 SV...	[more]
Q01148	8.8e-10	88.24	NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum OX=4565 GN=ND1 PE=2 ...	[more]
P48898	5.3e-07	79.31	NADH-ubiquinone oxidoreductase chain 1 OS=Chondrus crispus OX=2769 GN=ND1 PE=3 S...	[more]

BLAST of MC09g1122 vs. NCBI nr


Match Name	E-value	Identity	Description
AFK49321.1	5.24e-11	88.24	unknown [Lotus japonicus]	[more]
KAG6621639.1	5.50e-11	88.24	hypothetical protein I3842_Q005600, partial [Carya illinoinensis]	[more]
XP_025658107.1	5.64e-11	88.24	uncharacterized protein LOC112754623 [Arachis hypogaea]	[more]
XP_025881931.1	5.92e-11	88.24	uncharacterized protein LOC107276733 [Oryza sativa Japonica Group]	[more]
XP_042414854.1	6.21e-11	88.24	NADH-ubiquinone oxidoreductase chain 1-like [Zingiber officinale]	[more]

BLAST of MC09g1122 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
I3T9X9	2.54e-11	88.24	Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1	[more]
A0A6N2L2K9	2.84e-11	85.29	Uncharacterized protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS1693...	[more]
A0A6A4MSF1	3.01e-11	88.24	NADH-ubiquinone oxidoreductase chain 1 OS=Lupinus albus OX=3870 GN=Lalb_Chr00c21...	[more]
A0A6P6FU67	3.01e-11	88.24	uncharacterized protein LOC112490030 OS=Ziziphus jujuba OX=326968 GN=LOC11249003...	[more]
A0A386JNF6	3.01e-11	88.24	NADH-ubiquinone oxidoreductase chain 1 OS=Glycine soja OX=3848 GN=nad1 PE=3 SV=1	[more]

BLAST of MC09g1122 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07785.1	3.1e-10	85.29	NADH dehydrogenase family protein	[more]
ATMG01120.1	3.1e-10	85.29	NADH dehydrogenase 1B	[more]
ATMG00516.1	3.1e-10	85.29	NADH dehydrogenase 1C	[more]
ATMG01275.1	3.1e-10	85.29	NADH dehydrogenase 1A	[more]
ATCG01100.1	2.5e-04	50.00	NADH dehydrogenase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PFAM	PF00146	NADHdh	coord: 1..31 e-value: 5.8E-10 score: 39.0
IPR018086	NADH:ubiquinone oxidoreductase, subunit 1, conserved site	PROSITE	PS00667	COMPLEX1_ND1_1	coord: 14..29

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g1122.1	MC09g1122.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity