MC09g0978 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0978
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC09: 15169108 .. 15169290 (+)
RNA-Seq Expression	MC09g0978
Synteny	MC09g0978

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCCTCAGGATTTCATTAAGGTATCTGTTGATGCCGCATGCAATGGTCAAATTCAATCAACGGGGCTAGGTATTCTCCTTCGTGACAGTTGCAGGCGAATTATTGCAGCTTATTTGACTTTCATTCCAATTCCTTTTTCTCCCATTCTCGCTGAAGTTAGGGCAATTTATGAAGGTCTGCGT

mRNA sequence

CCGCCTCAGGATTTCATTAAGGTATCTGTTGATGCCGCATGCAATGGTCAAATTCAATCAACGGGGCTAGGTATTCTCCTTCGTGACAGTTGCAGGCGAATTATTGCAGCTTATTTGACTTTCATTCCAATTCCTTTTTCTCCCATTCTCGCTGAAGTTAGGGCAATTTATGAAGGTCTGCGT

Coding sequence (CDS)

CCGCCTCAGGATTTCATTAAGGTATCTGTTGATGCCGCATGCAATGGTCAAATTCAATCAACGGGGCTAGGTATTCTCCTTCGTGACAGTTGCAGGCGAATTATTGCAGCTTATTTGACTTTCATTCCAATTCCTTTTTCTCCCATTCTCGCTGAAGTTAGGGCAATTTATGAAGGTCTGCGT

Protein sequence

PPQDFIKVSVDAACNGQIQSTGLGILLRDSCRRIIAAYLTFIPIPFSPILAEVRAIYEGLR

Homology

[Close]

BLAST of MC09g0978 vs. NCBI nr
Match: XP_038874893.1 (uncharacterized protein LOC120067397 [Benincasa hispida])

HSP 1 Score: 52.0 bits (123), Expect = 1.30e-06
Identity = 24/61 (39.34%), Postives = 36/61 (59.02%), Query Frame = 0


Query: 1  PPQDFIKVSVDAACNGQIQSTGLGILLRDSCRRIIAAYLTFIPIPFSPILAEVRAIYEGL 60
          P QD+ K +VDA        TG+G+ +RDS   ++A   + + I F   LAE+RAI EG+
Sbjct: 4  PHQDWFKANVDAGWRSSFNLTGIGVSIRDSSGSLVATVASILNIIFPETLAEIRAILEGI 63

[Close]

BLAST of MC09g0978 vs. NCBI nr
Match: XP_022131661.1 (uncharacterized protein LOC111004786 [Momordica charantia])

HSP 1 Score: 53.9 bits (128), Expect = 1.33e-06
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 1   PPQDF-IKVSVDAACNGQIQSTGLGILLRDSCRRIIAAYLTFIPIPFSPILAEVRAIYEG 60
           PP+D  +KV+ DAAC     STGLG+++RD    ++ A   F+P+P +P+ AE+R I E 
Sbjct: 117 PPRDSAMKVNSDAACRST--STGLGLIIRDHFGVLLVAKSMFLPMPLNPLFAEIRGILEA 176

[Close]

BLAST of MC09g0978 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 54.3 bits (129), Expect = 1.61e-06
Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 6    IKVSVDAACNGQIQSTGLGILLRDSCRRIIAAYLTFIPIPFSPILAEVRAIYEGLR 61
            +K++ DAAC G   ST  G ++RDS   ++AA    +P P SP+LAE+R I EGL+
Sbjct: 1302 LKLNTDAACRGA--STSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLK 1355

[Close]

BLAST of MC09g0978 vs. NCBI nr
Match: TXG67927.1 (hypothetical protein EZV62_009202 [Acer yangbiense])

HSP 1 Score: 50.1 bits (118), Expect = 2.20e-05
Identity = 27/61 (44.26%), Postives = 36/61 (59.02%), Query Frame = 0


Query: 1   PPQDFIKVSVDAACNGQIQSTGLGILLRDSCRRIIAAYLTFIPIPFSPILAEVRAIYEGL 60
           PP    K++ DAA     Q  G+GI++RDSC R+ A+ +  I   FSP +AE  AI  GL
Sbjct: 100 PPTGSFKINSDAAVRVNNQLIGVGIVVRDSCGRVCASSVNRINACFSPSVAEAIAIRNGL 159

[Close]

BLAST of MC09g0978 vs. NCBI nr
Match: KAE8653582.1 (hypothetical protein Csa_007063 [Cucumis sativus])

HSP 1 Score: 48.5 bits (114), Expect = 3.73e-05
Identity = 21/59 (35.59%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 2  PQDFIKVSVDAACNGQIQSTGLGILLRDSCRRIIAAYLTFIPIPFSPILAEVRAIYEGL 60
          P     + VDAAC+    ++G+G++  D+CR ++ A    +  PF+P+L+E  AI EG+
Sbjct: 34 PTGCCYIFVDAACSSVRNASGIGVVALDACRNVLGAVAKQLSNPFNPLLSETAAIKEGV 92

[Close]

BLAST of MC09g0978 vs. ExPASy TrEMBL
Match: A0A6J1BQ49 (uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004786 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.43e-07
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 1   PPQDF-IKVSVDAACNGQIQSTGLGILLRDSCRRIIAAYLTFIPIPFSPILAEVRAIYEG 60
           PP+D  +KV+ DAAC     STGLG+++RD    ++ A   F+P+P +P+ AE+R I E 
Sbjct: 117 PPRDSAMKVNSDAACRST--STGLGLIIRDHFGVLLVAKSMFLPMPLNPLFAEIRGILEA 176

[Close]

BLAST of MC09g0978 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 7.78e-07
Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 6    IKVSVDAACNGQIQSTGLGILLRDSCRRIIAAYLTFIPIPFSPILAEVRAIYEGLR 61
            +K++ DAAC G   ST  G ++RDS   ++AA    +P P SP+LAE+R I EGL+
Sbjct: 1302 LKLNTDAACRGA--STSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLK 1355

[Close]

BLAST of MC09g0978 vs. ExPASy TrEMBL
Match: A0A5C7IF08 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_009202 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.06e-05
Identity = 27/61 (44.26%), Postives = 36/61 (59.02%), Query Frame = 0


Query: 1   PPQDFIKVSVDAACNGQIQSTGLGILLRDSCRRIIAAYLTFIPIPFSPILAEVRAIYEGL 60
           PP    K++ DAA     Q  G+GI++RDSC R+ A+ +  I   FSP +AE  AI  GL
Sbjct: 100 PPTGSFKINSDAAVRVNNQLIGVGIVVRDSCGRVCASSVNRINACFSPSVAEAIAIRNGL 159

[Close]

BLAST of MC09g0978 vs. ExPASy TrEMBL
Match: A0A0A0M389 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G660160 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.71e-05
Identity = 21/58 (36.21%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 2  PQDFIKVSVDAACNGQIQSTGLGILLRDSCRRIIAAYLTFIPIPFSPILAEVRAIYEG 59
          P     + VDAAC+    ++G+G++  D+CR ++ A    +  PF+P+L+E  AI EG
Sbjct: 34 PTGCCYIFVDAACSSVRNASGIGVVALDACRNVLGAVAKQLSNPFNPLLSETAAIKEG 91

[Close]

BLAST of MC09g0978 vs. ExPASy TrEMBL
Match: A0A5C7GQX3 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026488 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.97e-05
Identity = 23/61 (37.70%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 1   PPQDFIKVSVDAACNGQIQSTGLGILLRDSCRRIIAAYLTFIPIPFSPILAEVRAIYEGL 60
           PPQ   K++ DAA N Q  S G+G+++R+   +++ +        FSP++AE  A+ EGL
Sbjct: 84  PPQGMFKINTDAALNVQGNSAGIGVVIRNFRGQVMLSSCKNFRTAFSPVIAEALAVLEGL 143

The following BLAST results are available for this feature:

BLAST of MC09g0978 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g0978 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874893.1	1.30e-06	39.34	uncharacterized protein LOC120067397 [Benincasa hispida]	[more]
XP_022131661.1	1.33e-06	43.55	uncharacterized protein LOC111004786 [Momordica charantia]	[more]
XP_022158377.1	1.61e-06	46.43	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
TXG67927.1	2.20e-05	44.26	hypothetical protein EZV62_009202 [Acer yangbiense]	[more]
KAE8653582.1	3.73e-05	35.59	hypothetical protein Csa_007063 [Cucumis sativus]	[more]

BLAST of MC09g0978 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BQ49	6.43e-07	43.55	uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A6J1DX30	7.78e-07	46.43	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A5C7IF08	1.06e-05	44.26	RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_009202 ...	[more]
A0A0A0M389	1.71e-05	36.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G660160 PE=4 SV=1	[more]
A0A5C7GQX3	1.97e-05	37.70	RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026488 ...	[more]

BLAST of MC09g0978 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g0978.1	MC09g0978.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0016791	phosphatase activity