MC09g0898 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g0898
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionORF64c
LocationMC09: 12217076 .. 12217159 (+)
RNA-Seq ExpressionMC09g0898
SyntenyMC09g0898
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAGCATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCC

mRNA sequence

GGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAGCATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCC

Coding sequence (CDS)

GGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAGCATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCC

Protein sequence

GGRSGSENVGLSNASIGENPMPRKPKGS
Homology
BLAST of MC09g0898 vs. NCBI nr
Match: EFH39562.1 (ORF64c, partial [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 55.5 bits (132), Expect = 5.93e-09
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  GGRSGSENVGLSNASIGENPMPRKPKGS 28
          GGRSGSENVGLSNA+IGENPMPRKPKGS
Sbjct: 33 GGRSGSENVGLSNANIGENPMPRKPKGS 60

BLAST of MC09g0898 vs. NCBI nr
Match: OIT06061.1 (hypothetical protein A4A49_61658, partial [Nicotiana attenuata])

HSP 1 Score: 55.5 bits (132), Expect = 6.07e-09
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  GGRSGSENVGLSNASIGENPMPRKPKGS 28
          GGRSGSENVGLSNA+IGENPMPRKPKGS
Sbjct: 33 GGRSGSENVGLSNANIGENPMPRKPKGS 60

BLAST of MC09g0898 vs. NCBI nr
Match: KAG6621045.1 (hypothetical protein I3842_Q035900 [Carya illinoinensis])

HSP 1 Score: 55.5 bits (132), Expect = 6.07e-09
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  GGRSGSENVGLSNASIGENPMPRKPKGS 28
          GGRSGSENVGLSNA+IGENPMPRKPKGS
Sbjct: 33 GGRSGSENVGLSNANIGENPMPRKPKGS 60

BLAST of MC09g0898 vs. NCBI nr
Match: OIT01459.1 (hypothetical protein A4A49_60095 [Nicotiana attenuata] >OIT01460.1 hypothetical protein A4A49_59740 [Nicotiana attenuata] >OIT04679.1 hypothetical protein A4A49_65307 [Nicotiana attenuata] >OIT05992.1 hypothetical protein A4A49_61563 [Nicotiana attenuata] >OIT20135.1 hypothetical protein A4A49_04777 [Nicotiana attenuata])

HSP 1 Score: 55.5 bits (132), Expect = 6.07e-09
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  GGRSGSENVGLSNASIGENPMPRKPKGS 28
          GGRSGSENVGLSNA+IGENPMPRKPKGS
Sbjct: 33 GGRSGSENVGLSNANIGENPMPRKPKGS 60

BLAST of MC09g0898 vs. NCBI nr
Match: KAF8091071.1 (hypothetical protein N665_0454s0012 [Sinapis alba] >KAG2275696.1 hypothetical protein Bca52824_058251 [Brassica carinata])

HSP 1 Score: 55.5 bits (132), Expect = 6.07e-09
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  GGRSGSENVGLSNASIGENPMPRKPKGS 28
          GGRSGSENVGLSNA+IGENPMPRKPKGS
Sbjct: 33 GGRSGSENVGLSNANIGENPMPRKPKGS 60

BLAST of MC09g0898 vs. ExPASy TrEMBL
Match: D7MVM3 (ORF64c (Fragment) OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_497139 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.87e-09
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  GGRSGSENVGLSNASIGENPMPRKPKGS 28
          GGRSGSENVGLSNA+IGENPMPRKPKGS
Sbjct: 33 GGRSGSENVGLSNANIGENPMPRKPKGS 60

BLAST of MC09g0898 vs. ExPASy TrEMBL
Match: M1CPG0 (ORF64c OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.94e-09
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  GGRSGSENVGLSNASIGENPMPRKPKGS 28
          GGRSGSENVGLSNA+IGENPMPRKPKGS
Sbjct: 33 GGRSGSENVGLSNANIGENPMPRKPKGS 60

BLAST of MC09g0898 vs. ExPASy TrEMBL
Match: A0A1J6KDV2 (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_04777 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.94e-09
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  GGRSGSENVGLSNASIGENPMPRKPKGS 28
          GGRSGSENVGLSNA+IGENPMPRKPKGS
Sbjct: 33 GGRSGSENVGLSNANIGENPMPRKPKGS 60

BLAST of MC09g0898 vs. ExPASy TrEMBL
Match: A0A0V0GDY0 (Putative ovule protein (Fragment) OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.94e-09
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  GGRSGSENVGLSNASIGENPMPRKPKGS 28
          GGRSGSENVGLSNA+IGENPMPRKPKGS
Sbjct: 33 GGRSGSENVGLSNANIGENPMPRKPKGS 60

BLAST of MC09g0898 vs. ExPASy TrEMBL
Match: A0A1J6ILP4 (Uncharacterized protein (Fragment) OS=Nicotiana attenuata OX=49451 GN=A4A49_61658 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.94e-09
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0

Query: 1  GGRSGSENVGLSNASIGENPMPRKPKGS 28
          GGRSGSENVGLSNA+IGENPMPRKPKGS
Sbjct: 33 GGRSGSENVGLSNANIGENPMPRKPKGS 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
EFH39562.15.93e-0996.43ORF64c, partial [Arabidopsis lyrata subsp. lyrata][more]
OIT06061.16.07e-0996.43hypothetical protein A4A49_61658, partial [Nicotiana attenuata][more]
KAG6621045.16.07e-0996.43hypothetical protein I3842_Q035900 [Carya illinoinensis][more]
OIT01459.16.07e-0996.43hypothetical protein A4A49_60095 [Nicotiana attenuata] >OIT01460.1 hypothetical ... [more]
KAF8091071.16.07e-0996.43hypothetical protein N665_0454s0012 [Sinapis alba] >KAG2275696.1 hypothetical pr... [more]
Match NameE-valueIdentityDescription
D7MVM32.87e-0996.43ORF64c (Fragment) OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_497... [more]
M1CPG02.94e-0996.43ORF64c OS=Solanum tuberosum OX=4113 PE=4 SV=1[more]
A0A1J6KDV22.94e-0996.43Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_04777 PE=4 SV=1[more]
A0A0V0GDY02.94e-0996.43Putative ovule protein (Fragment) OS=Solanum chacoense OX=4108 PE=4 SV=1[more]
A0A1J6ILP42.94e-0996.43Uncharacterized protein (Fragment) OS=Nicotiana attenuata OX=49451 GN=A4A49_6165... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g0898.1MC09g0898.1mRNA