MC09g0824 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0824
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Pathogenic type III effector avirulence factor Avr cleavage site
Location	MC09: 8613906 .. 8614115 (-)
RNA-Seq Expression	MC09g0824
Synteny	MC09g0824

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGATTACTACTACCGCAGAAACTACATTCCCTCCTTCGGCAACTGGGACTGGAACGACCACCTTCCTTTCACCCAGTGCTTCGACTCCTCCACAACCGCCGCTTACGCCGGCGCCGCCCATGGCTACTCCGAGGTTCGCGACTTGTACGTCGCCGGCGATTTGTATCACAACGACGTCGTCACCCCCGCCATGATCGTCGTCCCTCGC

mRNA sequence

CAGGATTACTACTACCGCAGAAACTACATTCCCTCCTTCGGCAACTGGGACTGGAACGACCACCTTCCTTTCACCCAGTGCTTCGACTCCTCCACAACCGCCGCTTACGCCGGCGCCGCCCATGGCTACTCCGAGGTTCGCGACTTGTACGTCGCCGGCGATTTGTATCACAACGACGTCGTCACCCCCGCCATGATCGTCGTCCCTCGC

Coding sequence (CDS)

CAGGATTACTACTACCGCAGAAACTACATTCCCTCCTTCGGCAACTGGGACTGGAACGACCACCTTCCTTTCACCCAGTGCTTCGACTCCTCCACAACCGCCGCTTACGCCGGCGCCGCCCATGGCTACTCCGAGGTTCGCGACTTGTACGTCGCCGGCGATTTGTATCACAACGACGTCGTCACCCCCGCCATGATCGTCGTCCCTCGC

Protein sequence

QDYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDVVTPAMIVVPR

Homology

[Close]

BLAST of MC09g0824 vs. NCBI nr
Match: XP_022156085.1 (uncharacterized protein LOC111023056 [Momordica charantia])

HSP 1 Score: 152 bits (385), Expect = 9.32e-46
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  QDYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDV 60
          +DYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDV
Sbjct: 2  EDYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDV 61

Query: 61 VTPAMIVVPR 70
          VTPAMIVVPR
Sbjct: 62 VTPAMIVVPR 71

[Close]

BLAST of MC09g0824 vs. NCBI nr
Match: XP_038899118.1 (uncharacterized protein LOC120086508 [Benincasa hispida])

HSP 1 Score: 110 bits (275), Expect = 4.49e-29
Identity = 52/70 (74.29%), Postives = 55/70 (78.57%), Query Frame = 0


Query: 1  QDYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDV 60
          +DYYYRRNYIPSFGNW+WNDHLPF+ CFDSS  A       GY    DLYVAGDLY NDV
Sbjct: 2  EDYYYRRNYIPSFGNWEWNDHLPFSHCFDSSRIA-------GYPHDTDLYVAGDLYQNDV 61

Query: 61 VTPAMIVVPR 70
          VTPAMIVVPR
Sbjct: 62 VTPAMIVVPR 64

[Close]

BLAST of MC09g0824 vs. NCBI nr
Match: XP_023550147.1 (uncharacterized protein LOC111808425 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 108 bits (271), Expect = 1.53e-28
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 1  QDYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDV 60
          +DY Y+RN+IP+FGNW+WNDHLPFTQCF++S  A       GY +VRDLYVAGDLY NDV
Sbjct: 2  EDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIA-------GYPDVRDLYVAGDLYQNDV 61

Query: 61 VTPAMIVVPR 70
          VTPAMIVVPR
Sbjct: 62 VTPAMIVVPR 64

[Close]

BLAST of MC09g0824 vs. NCBI nr
Match: XP_022960043.1 (uncharacterized protein LOC111460910 [Cucurbita moschata] >XP_023004237.1 uncharacterized protein LOC111497631 [Cucurbita maxima] >KAG6593050.1 hypothetical protein SDJN03_12526, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025458.1 hypothetical protein SDJN02_11953 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 108 bits (271), Expect = 1.53e-28
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 1  QDYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDV 60
          +DY Y+RN+IP+FGNW+WNDHLPFTQCF++S  A       GY +VRDLYVAGDLY NDV
Sbjct: 2  EDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIA-------GYPDVRDLYVAGDLYQNDV 61

Query: 61 VTPAMIVVPR 70
          VTPAMIVVPR
Sbjct: 62 VTPAMIVVPR 64

[Close]

BLAST of MC09g0824 vs. NCBI nr
Match: XP_004150335.2 (uncharacterized protein LOC101219200 [Cucumis sativus] >KGN44691.1 hypothetical protein Csa_016635 [Cucumis sativus])

HSP 1 Score: 107 bits (267), Expect = 6.58e-28
Identity = 50/70 (71.43%), Postives = 55/70 (78.57%), Query Frame = 0


Query: 1  QDYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDV 60
          +DYYYRRNYIPSFGNW+WNDHLPF+ CF+SS  A       G+    DLYVAGDLY NDV
Sbjct: 2  EDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIA-------GFPHDTDLYVAGDLYENDV 61

Query: 61 VTPAMIVVPR 70
          VTPAMIVVPR
Sbjct: 62 VTPAMIVVPR 64

[Close]

BLAST of MC09g0824 vs. ExPASy TrEMBL
Match: A0A6J1DPB1 (uncharacterized protein LOC111023056 OS=Momordica charantia OX=3673 GN=LOC111023056 PE=4 SV=1)

HSP 1 Score: 152 bits (385), Expect = 4.51e-46
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  QDYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDV 60
          +DYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDV
Sbjct: 2  EDYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDV 61

Query: 61 VTPAMIVVPR 70
          VTPAMIVVPR
Sbjct: 62 VTPAMIVVPR 71

[Close]

BLAST of MC09g0824 vs. ExPASy TrEMBL
Match: A0A6J1KPV8 (uncharacterized protein LOC111497631 OS=Cucurbita maxima OX=3661 GN=LOC111497631 PE=4 SV=1)

HSP 1 Score: 108 bits (271), Expect = 7.43e-29
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 1  QDYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDV 60
          +DY Y+RN+IP+FGNW+WNDHLPFTQCF++S  A       GY +VRDLYVAGDLY NDV
Sbjct: 2  EDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIA-------GYPDVRDLYVAGDLYQNDV 61

Query: 61 VTPAMIVVPR 70
          VTPAMIVVPR
Sbjct: 62 VTPAMIVVPR 64

[Close]

BLAST of MC09g0824 vs. ExPASy TrEMBL
Match: A0A6J1H7P4 (uncharacterized protein LOC111460910 OS=Cucurbita moschata OX=3662 GN=LOC111460910 PE=4 SV=1)

HSP 1 Score: 108 bits (271), Expect = 7.43e-29
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 1  QDYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDV 60
          +DY Y+RN+IP+FGNW+WNDHLPFTQCF++S  A       GY +VRDLYVAGDLY NDV
Sbjct: 2  EDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIA-------GYPDVRDLYVAGDLYQNDV 61

Query: 61 VTPAMIVVPR 70
          VTPAMIVVPR
Sbjct: 62 VTPAMIVVPR 64

[Close]

BLAST of MC09g0824 vs. ExPASy TrEMBL
Match: A0A0A0KA54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372860 PE=4 SV=1)

HSP 1 Score: 107 bits (267), Expect = 3.19e-28
Identity = 50/70 (71.43%), Postives = 55/70 (78.57%), Query Frame = 0


Query: 1  QDYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDV 60
          +DYYYRRNYIPSFGNW+WNDHLPF+ CF+SS  A       G+    DLYVAGDLY NDV
Sbjct: 2  EDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIA-------GFPHDTDLYVAGDLYENDV 61

Query: 61 VTPAMIVVPR 70
          VTPAMIVVPR
Sbjct: 62 VTPAMIVVPR 64

[Close]

BLAST of MC09g0824 vs. ExPASy TrEMBL
Match: A0A5C7HH61 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020968 PE=4 SV=1)

HSP 1 Score: 107 bits (267), Expect = 7.49e-28
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 1  QDYYYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAHGYSEVRDLYVAGDLYHNDV 60
          QDYYYRR+++P+FG+WDWN+ LPFTQCFDS+  A      + YSE RDLYVAGDLY NDV
Sbjct: 17 QDYYYRRSHVPAFGSWDWNNDLPFTQCFDSARQAGLL--RYSYSEDRDLYVAGDLYDNDV 76

Query: 61 VTPAMIVVPR 70
          VTPAMIVVPR
Sbjct: 77 VTPAMIVVPR 84

[Close]

BLAST of MC09g0824 vs. TAIR 10
Match: AT5G48500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 3.5e-16
Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 0


Query: 4  YYRRNYIPSFGNWDWNDHLPFTQCFDSSTTAAYAGAAH-GYSEVRDLYVAGDLYHN-DVV 63
          Y RR ++P+FG+WDWND +PFTQCF+++TT   A   +  Y + RDLY+AGDLY N  +V
Sbjct: 10 YCRRGHVPAFGSWDWNDAVPFTQCFETATTQQPAFLHYASYPQDRDLYLAGDLYDNHHLV 69

Query: 64 TPAMIVVPR 71
           PA+I+VPR
Sbjct: 70 APAVIIVPR 78

The following BLAST results are available for this feature:

BLAST of MC09g0824 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g0824 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156085.1	9.32e-46	98.57	uncharacterized protein LOC111023056 [Momordica charantia]	[more]
XP_038899118.1	4.49e-29	74.29	uncharacterized protein LOC120086508 [Benincasa hispida]	[more]
XP_023550147.1	1.53e-28	71.43	uncharacterized protein LOC111808425 [Cucurbita pepo subsp. pepo]	[more]
XP_022960043.1	1.53e-28	71.43	uncharacterized protein LOC111460910 [Cucurbita moschata] >XP_023004237.1 unchar...	[more]
XP_004150335.2	6.58e-28	71.43	uncharacterized protein LOC101219200 [Cucumis sativus] >KGN44691.1 hypothetical ...	[more]

BLAST of MC09g0824 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPB1	4.51e-46	98.57	uncharacterized protein LOC111023056 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1KPV8	7.43e-29	71.43	uncharacterized protein LOC111497631 OS=Cucurbita maxima OX=3661 GN=LOC111497631...	[more]
A0A6J1H7P4	7.43e-29	71.43	uncharacterized protein LOC111460910 OS=Cucurbita moschata OX=3662 GN=LOC1114609...	[more]
A0A0A0KA54	3.19e-28	71.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372860 PE=4 SV=1	[more]
A0A5C7HH61	7.49e-28	71.43	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020968 PE=4 SV=1	[more]

BLAST of MC09g0824 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48500.1	3.5e-16	55.07	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33699:SF21	SUBFAMILY NOT NAMED	coord: 4..70
None	No IPR available	PANTHER	PTHR33699	EXPRESSED PROTEIN	coord: 4..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g0824.1	MC09g0824.1	mRNA