MC09g0812 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0812
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	LOB domain-containing protein
Location	MC09: 8297890 .. 8298657 (-)
RNA-Seq Expression	MC09g0812
Synteny	MC09g0812

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCTCAGCTTCTTCTTCTTCTTCTCCTTGTGGAGCTTGCAAGTTTCTTAGAAGAAAGTGTGTCAATGGCTGCATCTTTGCCCCTTACTTCCGCCACGAACTCGGCACCTCTCACTTCTCTGCCGTCCACAAGGTCTTCGGGGCAAGCAACGCTTCCAAGCTTCTCGCTCACCTCCCGGTCTCCCACCGCTGCGAGGCCGCGATCACGATCTCGTACGAAGCTCAAGCTCGGCTGCAAGATCCGATCTATGGCTGTGTCTCGCATATTTTTACTCTCCAACAACAGGTTAGACGTATAAAAAGTCGCTTAAATTTACCCTAACCCTATTATCTTTACTCATCTCTTTTGAGTTCAAATCAATGGATTTGGACGTTTGGTCATTAAGAATGTAAATCTATTTAAGCTTTTGAGTTAAGAGGTGATTTAGCAAAATCGTGTTGATCATCGGAAAACCCTAATTTTCCAGATCGATTTTGATGATGATTTGGATGGTGTGGGAAATGGCAGGTTCTGAATCTAAGGGCTCAGGTGGCTTATTTGAGAGAACAAGCAGCTCAAATTCTTCTCAACAACTACACCATAAGAAACCCTAACGAATTACTGTACGGAAAATCTCCATTTTCCGGCGACCCATTGCAGGATCTTCAGAGTTGGCTTCTGGCGGAGGACCGGAGCGCCGCCGCGCCGGAGTTCGAACCTGCGGCGGTGCCTTTCGTTGAGATGAGCTTGGCCGATCCAAATGTCGCCGGAGATTGCTGCTGC

mRNA sequence

ATGGCTGCCTCAGCTTCTTCTTCTTCTTCTCCTTGTGGAGCTTGCAAGTTTCTTAGAAGAAAGTGTGTCAATGGCTGCATCTTTGCCCCTTACTTCCGCCACGAACTCGGCACCTCTCACTTCTCTGCCGTCCACAAGGTCTTCGGGGCAAGCAACGCTTCCAAGCTTCTCGCTCACCTCCCGGTCTCCCACCGCTGCGAGGCCGCGATCACGATCTCGTACGAAGCTCAAGCTCGGCTGCAAGATCCGATCTATGGCTGTGTCTCGCATATTTTTACTCTCCAACAACAGGTTCTGAATCTAAGGGCTCAGGTGGCTTATTTGAGAGAACAAGCAGCTCAAATTCTTCTCAACAACTACACCATAAGAAACCCTAACGAATTACTGTACGGAAAATCTCCATTTTCCGGCGACCCATTGCAGGATCTTCAGAGTTGGCTTCTGGCGGAGGACCGGAGCGCCGCCGCGCCGGAGTTCGAACCTGCGGCGGTGCCTTTCGTTGAGATGAGCTTGGCCGATCCAAATGTCGCCGGAGATTGCTGCTGC

Coding sequence (CDS)

ATGGCTGCCTCAGCTTCTTCTTCTTCTTCTCCTTGTGGAGCTTGCAAGTTTCTTAGAAGAAAGTGTGTCAATGGCTGCATCTTTGCCCCTTACTTCCGCCACGAACTCGGCACCTCTCACTTCTCTGCCGTCCACAAGGTCTTCGGGGCAAGCAACGCTTCCAAGCTTCTCGCTCACCTCCCGGTCTCCCACCGCTGCGAGGCCGCGATCACGATCTCGTACGAAGCTCAAGCTCGGCTGCAAGATCCGATCTATGGCTGTGTCTCGCATATTTTTACTCTCCAACAACAGGTTCTGAATCTAAGGGCTCAGGTGGCTTATTTGAGAGAACAAGCAGCTCAAATTCTTCTCAACAACTACACCATAAGAAACCCTAACGAATTACTGTACGGAAAATCTCCATTTTCCGGCGACCCATTGCAGGATCTTCAGAGTTGGCTTCTGGCGGAGGACCGGAGCGCCGCCGCGCCGGAGTTCGAACCTGCGGCGGTGCCTTTCGTTGAGATGAGCTTGGCCGATCCAAATGTCGCCGGAGATTGCTGCTGC

Protein sequence

MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHLPVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNYTIRNPNELLYGKSPFSGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAGDCCC

Homology

[Close]

BLAST of MC09g0812 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.1e-49
Identity = 100/143 (69.93%), Postives = 117/143 (81.82%), Query Frame = 0


Query: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60
           M +S+SSS SPCGACKFLRRKC  GC+FAPYF HE G SHF+A+HKVFGASNASKLL+HL
Sbjct: 1   MTSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHL 60

Query: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQ--ILLN 120
           P+S RCEAAITISYEAQARLQDPIYGCVSHIF LQQQV+NL+A++  L++QAAQ  I  +
Sbjct: 61  PISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFAD 120

Query: 121 NYTIRNPNELLYG---KSPFSGD 139
           + T  NPN   YG   K+P+  D
Sbjct: 121 SPTSENPNS-YYGDTTKAPYHHD 142

[Close]

BLAST of MC09g0812 vs. ExPASy Swiss-Prot
Match: Q9SLB6 (LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.2e-42
Identity = 83/123 (67.48%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 6   SSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHLPVSHR 65
           + S SPCGACKFLRR+CV GC+FAPYF HE G SHF+A+H+VFGASNASKLL+HLP+  R
Sbjct: 2   TGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDR 61

Query: 66  CEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQ--ILLNNYTIR 125
            EAA TI YEAQAR QDPIYGCVSHIF+LQQQV+NL+ Q+  L++QA Q  + +++ +I 
Sbjct: 62  REAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMMAIDSPSIE 121

Query: 126 NPN 127
           NPN
Sbjct: 122 NPN 124

[Close]

BLAST of MC09g0812 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 9.4e-42
Identity = 80/105 (76.19%), Postives = 93/105 (88.57%), Query Frame = 0


Query: 10  SPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHLPVSHRCEAA 69
           SPCGACKFLRRKCV GC+FAPYF HE G +HF+A+HKVFGASN SKLLAHLP++ R EAA
Sbjct: 6   SPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRPEAA 65

Query: 70  ITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQ 115
           +TISYEAQARL+DPIYGCV+HIF LQQQV+ L+AQ+A L+  AAQ
Sbjct: 66  VTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQ 110

[Close]

BLAST of MC09g0812 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 2.8e-38
Identity = 75/115 (65.22%), Postives = 92/115 (80.00%), Query Frame = 0


Query: 3   ASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHLPV 62
           +S      PCGACKFLRRKCV GCIFAPYF  E G+++F+AVHKVFGASN SKLL H+PV
Sbjct: 29  SSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPV 88

Query: 63  SHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILL 118
             R +A +TI YEAQAR++DPIYGCV+HIF LQQQV+NL+A+V+YL+   A + L
Sbjct: 89  HRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLEL 143

[Close]

BLAST of MC09g0812 vs. ExPASy Swiss-Prot
Match: Q9SJW5 (LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-37
Identity = 73/105 (69.52%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 10  SPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHLPVSHRCEAA 69
           SPCG CKFLRRKCV GC+FAPYF +E G+S+F+A+HKVFGASN SKL++HLP   RC+A 
Sbjct: 6   SPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHDRCDAV 65

Query: 70  ITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQ 115
            TISYEA +RL DPIYGCVS IF+LQQQV++L+AQV  LRE+A++
Sbjct: 66  RTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASR 110

[Close]

BLAST of MC09g0812 vs. NCBI nr
Match: XP_022156602.1 (LOB domain-containing protein 29-like [Momordica charantia])

HSP 1 Score: 366 bits (939), Expect = 2.39e-127
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60
           MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL
Sbjct: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120

Query: 121 TIRNPNELLYGKSPFSGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAGDC 180
           TIRNPNELLYGKSPFSGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAGDC
Sbjct: 121 TIRNPNELLYGKSPFSGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAGDC 180

Query: 181 CC 182
           CC
Sbjct: 181 CC 182

[Close]

BLAST of MC09g0812 vs. NCBI nr
Match: XP_038896394.1 (LOB domain-containing protein 29-like [Benincasa hispida])

HSP 1 Score: 309 bits (792), Expect = 3.25e-105
Identity = 156/182 (85.71%), Postives = 167/182 (91.76%), Query Frame = 0


Query: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60
           MAAS+SSSS PCGACKFLRRKCVNGCIFAP+FRHELG SHFSA+HKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSPPCGACKFLRRKCVNGCIFAPHFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120
           PVSHRC+AA+TISYEAQARLQDPIYGCVSHIF LQQQV+NLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCDAAVTISYEAQARLQDPIYGCVSHIFALQQQVMNLRAQVAYLREQAAQILLNNY 120

Query: 121 TIRNPNELLYGKSPF-SGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAGD 180
           T RNP EL Y KSPF S DPL DLQ+WLLAE  SAAAPEFEPAAVP+VEMS+ D N+AG+
Sbjct: 121 TTRNPIELPYEKSPFYSDDPLLDLQTWLLAESCSAAAPEFEPAAVPYVEMSVVDSNLAGN 180

[Close]

BLAST of MC09g0812 vs. NCBI nr
Match: XP_004150342.1 (LOB domain-containing protein 29 [Cucumis sativus] >KGN44703.1 hypothetical protein Csa_015971 [Cucumis sativus])

HSP 1 Score: 309 bits (791), Expect = 4.79e-105
Identity = 155/184 (84.24%), Postives = 163/184 (88.59%), Query Frame = 0


Query: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60
           MAAS+SSS+ PCGACKFLRRKCVNGCIFAPYFRHELG SHFSA+HKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAA+TISYEAQARLQDPIYGCVSHI  LQQQV+NLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120

Query: 121 TIRNPNELLYGKSPF--SGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAG 180
           T RNP ELLY KSPF  S DP  DLQSWLLAE  SA APE EPAAVP+ EMS+ D  +AG
Sbjct: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180

Query: 181 DCCC 182
           D CC
Sbjct: 181 DFCC 184

[Close]

BLAST of MC09g0812 vs. NCBI nr
Match: XP_008447245.1 (PREDICTED: LOB domain-containing protein 29 [Cucumis melo])

HSP 1 Score: 303 bits (777), Expect = 6.51e-103
Identity = 154/184 (83.70%), Postives = 162/184 (88.04%), Query Frame = 0


Query: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60
           MAAS+SSSSSPCGACKFLRRKCVNGCIFAPYFRHELG SHFSA+HKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAA+TISYEAQARLQDPIYGCVSHI  LQQQV+NLRAQVA LREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNY 120

Query: 121 TIRNPNELLYGKSPF--SGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAG 180
           T RN  EL Y KSPF  S DP  DLQSWLL E  +AAAPEFEPAAVP+ EMS+ D  +AG
Sbjct: 121 TTRNSTELPYEKSPFYYSDDPFLDLQSWLLTESCTAAAPEFEPAAVPYFEMSVIDSKLAG 180

Query: 181 DCCC 182
           D CC
Sbjct: 181 DFCC 184

[Close]

BLAST of MC09g0812 vs. NCBI nr
Match: KAA0042058.1 (LOB domain-containing protein 29 [Cucumis melo var. makuwa] >TYK18001.1 LOB domain-containing protein 29 [Cucumis melo var. makuwa])

HSP 1 Score: 303 bits (777), Expect = 6.51e-103
Identity = 152/184 (82.61%), Postives = 163/184 (88.59%), Query Frame = 0


Query: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60
           MAAS+SSSSSPCGACKFLRRKCVNGCIFAPYFRHELG SHFSA+HKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAA+TISYEAQARLQDPIYGCVSHI  LQQQV+NLRAQVA LREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNY 120

Query: 121 TIRNPNELLYGKSP--FSGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAG 180
           T RNP EL Y KSP  +S DP  DLQSWLLAE  + AAPEFEPAA+P+ EMS+ +  +AG
Sbjct: 121 TTRNPTELPYEKSPLYYSDDPFLDLQSWLLAESCTVAAPEFEPAAIPYFEMSVVNSKLAG 180

Query: 181 DCCC 182
           D CC
Sbjct: 181 DFCC 184

[Close]

BLAST of MC09g0812 vs. ExPASy TrEMBL
Match: A0A6J1DSE8 (LOB domain-containing protein 29-like OS=Momordica charantia OX=3673 GN=LOC111023473 PE=3 SV=1)

HSP 1 Score: 366 bits (939), Expect = 1.16e-127
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60
           MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL
Sbjct: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120

Query: 121 TIRNPNELLYGKSPFSGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAGDC 180
           TIRNPNELLYGKSPFSGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAGDC
Sbjct: 121 TIRNPNELLYGKSPFSGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAGDC 180

Query: 181 CC 182
           CC
Sbjct: 181 CC 182

[Close]

BLAST of MC09g0812 vs. ExPASy TrEMBL
Match: A0A0A0K5D4 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G373460 PE=3 SV=1)

HSP 1 Score: 309 bits (791), Expect = 2.32e-105
Identity = 155/184 (84.24%), Postives = 163/184 (88.59%), Query Frame = 0


Query: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60
           MAAS+SSS+ PCGACKFLRRKCVNGCIFAPYFRHELG SHFSA+HKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAA+TISYEAQARLQDPIYGCVSHI  LQQQV+NLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120

Query: 121 TIRNPNELLYGKSPF--SGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAG 180
           T RNP ELLY KSPF  S DP  DLQSWLLAE  SA APE EPAAVP+ EMS+ D  +AG
Sbjct: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180

Query: 181 DCCC 182
           D CC
Sbjct: 181 DFCC 184

[Close]

BLAST of MC09g0812 vs. ExPASy TrEMBL
Match: A0A5D3D179 (LOB domain-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003110 PE=3 SV=1)

HSP 1 Score: 303 bits (777), Expect = 3.15e-103
Identity = 152/184 (82.61%), Postives = 163/184 (88.59%), Query Frame = 0


Query: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60
           MAAS+SSSSSPCGACKFLRRKCVNGCIFAPYFRHELG SHFSA+HKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAA+TISYEAQARLQDPIYGCVSHI  LQQQV+NLRAQVA LREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNY 120

Query: 121 TIRNPNELLYGKSP--FSGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAG 180
           T RNP EL Y KSP  +S DP  DLQSWLLAE  + AAPEFEPAA+P+ EMS+ +  +AG
Sbjct: 121 TTRNPTELPYEKSPLYYSDDPFLDLQSWLLAESCTVAAPEFEPAAIPYFEMSVVNSKLAG 180

Query: 181 DCCC 182
           D CC
Sbjct: 181 DFCC 184

[Close]

BLAST of MC09g0812 vs. ExPASy TrEMBL
Match: A0A1S3BGZ5 (LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489736 PE=3 SV=1)

HSP 1 Score: 303 bits (777), Expect = 3.15e-103
Identity = 154/184 (83.70%), Postives = 162/184 (88.04%), Query Frame = 0


Query: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60
           MAAS+SSSSSPCGACKFLRRKCVNGCIFAPYFRHELG SHFSA+HKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAA+TISYEAQARLQDPIYGCVSHI  LQQQV+NLRAQVA LREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNY 120

Query: 121 TIRNPNELLYGKSPF--SGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAG 180
           T RN  EL Y KSPF  S DP  DLQSWLL E  +AAAPEFEPAAVP+ EMS+ D  +AG
Sbjct: 121 TTRNSTELPYEKSPFYYSDDPFLDLQSWLLTESCTAAAPEFEPAAVPYFEMSVIDSKLAG 180

Query: 181 DCCC 182
           D CC
Sbjct: 181 DFCC 184

[Close]

BLAST of MC09g0812 vs. ExPASy TrEMBL
Match: A0A6J1KRG7 (LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC111498009 PE=3 SV=1)

HSP 1 Score: 291 bits (744), Expect = 3.48e-98
Identity = 148/185 (80.00%), Postives = 160/185 (86.49%), Query Frame = 0


Query: 1   MAASASSSSS--PCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLA 60
           MAAS+SSSSS  PCGACKFLRRKCVNGCIFAPYFRH+LG SHFSAVHKVFGASNASKLLA
Sbjct: 1   MAASSSSSSSSPPCGACKFLRRKCVNGCIFAPYFRHDLGASHFSAVHKVFGASNASKLLA 60

Query: 61  HLPVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLN 120
           HLPVSHR +AA+TISYEAQARLQDPIYGC+S IF LQ QV+NLRAQVAYLREQAAQILLN
Sbjct: 61  HLPVSHRSQAAVTISYEAQARLQDPIYGCISQIFALQHQVMNLRAQVAYLREQAAQILLN 120

Query: 121 NYTIRNPNELLYGKS-PFSGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVA 180
            Y  RNPNELLYG S  +S + L DLQ+WLL E  S AAPEFEP A P+VEM +AD N+A
Sbjct: 121 GYITRNPNELLYGNSLSYSDEQLLDLQTWLLEESCSTAAPEFEPTAAPYVEMGIADSNLA 180

Query: 181 GDCCC 182
           GD CC
Sbjct: 181 GDFCC 185

[Close]

BLAST of MC09g0812 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 196.8 bits (499), Expect = 1.5e-50
Identity = 100/143 (69.93%), Postives = 117/143 (81.82%), Query Frame = 0


Query: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60
           M +S+SSS SPCGACKFLRRKC  GC+FAPYF HE G SHF+A+HKVFGASNASKLL+HL
Sbjct: 1   MTSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHL 60

Query: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQ--ILLN 120
           P+S RCEAAITISYEAQARLQDPIYGCVSHIF LQQQV+NL+A++  L++QAAQ  I  +
Sbjct: 61  PISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFAD 120

Query: 121 NYTIRNPNELLYG---KSPFSGD 139
           + T  NPN   YG   K+P+  D
Sbjct: 121 SPTSENPNS-YYGDTTKAPYHHD 142

[Close]

BLAST of MC09g0812 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 172.9 bits (437), Expect = 2.3e-43
Identity = 83/123 (67.48%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 6   SSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHLPVSHR 65
           + S SPCGACKFLRR+CV GC+FAPYF HE G SHF+A+H+VFGASNASKLL+HLP+  R
Sbjct: 2   TGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDR 61

Query: 66  CEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQ--ILLNNYTIR 125
            EAA TI YEAQAR QDPIYGCVSHIF+LQQQV+NL+ Q+  L++QA Q  + +++ +I 
Sbjct: 62  REAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMMAIDSPSIE 121

Query: 126 NPN 127
           NPN
Sbjct: 122 NPN 124

[Close]

BLAST of MC09g0812 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-39
Identity = 75/115 (65.22%), Postives = 92/115 (80.00%), Query Frame = 0


Query: 3   ASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHLPV 62
           +S      PCGACKFLRRKCV GCIFAPYF  E G+++F+AVHKVFGASN SKLL H+PV
Sbjct: 29  SSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPV 88

Query: 63  SHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILL 118
             R +A +TI YEAQAR++DPIYGCV+HIF LQQQV+NL+A+V+YL+   A + L
Sbjct: 89  HRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLEL 143

[Close]

BLAST of MC09g0812 vs. TAIR 10
Match: AT2G31310.1 (LOB domain-containing protein 14 )

HSP 1 Score: 157.5 bits (397), Expect = 1.0e-38
Identity = 73/105 (69.52%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 10  SPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHLPVSHRCEAA 69
           SPCG CKFLRRKCV GC+FAPYF +E G+S+F+A+HKVFGASN SKL++HLP   RC+A 
Sbjct: 6   SPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHDRCDAV 65

Query: 70  ITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQ 115
            TISYEA +RL DPIYGCVS IF+LQQQV++L+AQV  LRE+A++
Sbjct: 66  RTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASR 110

[Close]

BLAST of MC09g0812 vs. TAIR 10
Match: AT4G00210.1 (LOB domain-containing protein 31 )

HSP 1 Score: 152.9 bits (385), Expect = 2.5e-37
Identity = 71/115 (61.74%), Postives = 90/115 (78.26%), Query Frame = 0


Query: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60
           M+ S +    PCGACKFLRRKCV  C+FAPYF    GTSHF+AVHKVFGASNASKLL  +
Sbjct: 1   MSGSTTGCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMI 60

Query: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQI 116
           P S R +A +T++YEA ARL+DP+YGCV HIF LQ QV+NL+A++AY++ Q + +
Sbjct: 61  PASRRLDAVVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQTQLSTL 115

The following BLAST results are available for this feature:

BLAST of MC09g0812 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2J7	2.1e-49	69.93	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]
Q9SLB6	3.2e-42	67.48	LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 S...	[more]
Q5UG13	9.4e-42	76.19	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
O22131	2.8e-38	65.22	LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S...	[more]
Q9SJW5	1.4e-37	69.52	LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 S...	[more]

BLAST of MC09g0812 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156602.1	2.39e-127	100.00	LOB domain-containing protein 29-like [Momordica charantia]	[more]
XP_038896394.1	3.25e-105	85.71	LOB domain-containing protein 29-like [Benincasa hispida]	[more]
XP_004150342.1	4.79e-105	84.24	LOB domain-containing protein 29 [Cucumis sativus] >KGN44703.1 hypothetical prot...	[more]
XP_008447245.1	6.51e-103	83.70	PREDICTED: LOB domain-containing protein 29 [Cucumis melo]	[more]
KAA0042058.1	6.51e-103	82.61	LOB domain-containing protein 29 [Cucumis melo var. makuwa] >TYK18001.1 LOB doma...	[more]

BLAST of MC09g0812 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSE8	1.16e-127	100.00	LOB domain-containing protein 29-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A0A0K5D4	2.32e-105	84.24	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G373460 PE=3 SV...	[more]
A0A5D3D179	3.15e-103	82.61	LOB domain-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BGZ5	3.15e-103	83.70	LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489736 PE=3 SV...	[more]
A0A6J1KRG7	3.48e-98	80.00	LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC11149800...	[more]

BLAST of MC09g0812 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58190.1	1.5e-50	69.93	lateral organ boundaries-domain 29	[more]
AT2G42440.1	2.3e-43	67.48	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G45420.1	2.0e-39	65.22	LOB domain-containing protein 18	[more]
AT2G31310.1	1.0e-38	69.52	LOB domain-containing protein 14	[more]
AT4G00210.1	2.5e-37	61.74	LOB domain-containing protein 31	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 11..108 e-value: 3.3E-34 score: 117.4
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 10..112 score: 21.75206
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 7..126
None	No IPR available	PANTHER	PTHR31529:SF26	LOB DOMAIN-CONTAINING PROTEIN 17-RELATED	coord: 7..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g0812.1	MC09g0812.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus