MC09g0778 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0778
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	NADH dehydrogenase subunit 7
Location	MC09: 7681526 .. 7681615 (+)
RNA-Seq Expression	MC09g0778
Synteny	MC09g0778

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACTCGATTATATGCCCAAACATCACATGCCAACAGATGTGGTCACCATCATAGGTACTCAAGATATTGTGTCTGGAGAGGTAGATAGA

mRNA sequence

GGACTCGATTATATGCCCAAACATCACATGCCAACAGATGTGGTCACCATCATAGGTACTCAAGATATTGTGTCTGGAGAGGTAGATAGA

Coding sequence (CDS)

GGACTCGATTATATGCCCAAACATCACATGCCAACAGATGTGGTCACCATCATAGGTACTCAAGATATTGTGTCTGGAGAGGTAGATAGA

Protein sequence

GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR

Homology

[Close]

BLAST of MC09g0778 vs. ExPASy Swiss-Prot
Match: Q36450 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX=4096 GN=NAD7 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-08
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 1   GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 31
           GLD M KHHMP DVVTIIGTQDIVSGEVDR
Sbjct: 365 GLDSMSKHHMPADVVTIIGTQDIVSGEVDR 394

[Close]

BLAST of MC09g0778 vs. ExPASy Swiss-Prot
Match: P93306 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX=3702 GN=NAD7 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 3.6e-07
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0


Query: 1   GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 31
           GLD+M KHHM  DVVTIIGTQDIV GEVDR
Sbjct: 365 GLDFMSKHHMLADVVTIIGTQDIVFGEVDR 394

[Close]

BLAST of MC09g0778 vs. ExPASy Swiss-Prot
Match: Q37619 (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii OX=3111 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 5.2e-06
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 0


Query: 1   GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 31
           GLD+M ++HM  DVVTIIGTQDIV GEVDR
Sbjct: 371 GLDFMARNHMLADVVTIIGTQDIVFGEVDR 400

[Close]

BLAST of MC09g0778 vs. ExPASy Swiss-Prot
Match: Q9TC96 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea OX=31312 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 6.8e-06
Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = 0


Query: 1   GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 31
           GLD M K+HM  DVVTIIGTQDIV GEVDR
Sbjct: 369 GLDMMSKNHMLADVVTIIGTQDIVFGEVDR 398

[Close]

BLAST of MC09g0778 vs. ExPASy Swiss-Prot
Match: O21270 (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Reclinomonas americana OX=48483 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.0e-05
Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = 0


Query: 1   GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 31
           GL++M K HM  DVVTIIGTQDIV GEVDR
Sbjct: 367 GLNFMSKGHMIADVVTIIGTQDIVFGEVDR 396

[Close]

BLAST of MC09g0778 vs. NCBI nr
Match: RZC89667.1 (hypothetical protein C5167_035900, partial [Papaver somniferum])

HSP 1 Score: 58.2 bits (139), Expect = 7.63e-10
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 1  GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 30
          GLD M KHHMP DVVTIIGTQDIVSGEVDR
Sbjct: 51 GLDSMSKHHMPADVVTIIGTQDIVSGEVDR 80

[Close]

BLAST of MC09g0778 vs. NCBI nr
Match: PLY78981.1 (hypothetical protein LSAT_5X16060 [Lactuca sativa])

HSP 1 Score: 58.5 bits (140), Expect = 7.88e-10
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0


Query: 1  GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 30
          GLD M KHHMP+DVVTIIGTQDIVSGEVDR
Sbjct: 67 GLDSMSKHHMPSDVVTIIGTQDIVSGEVDR 96

[Close]

BLAST of MC09g0778 vs. NCBI nr
Match: AOF47029.1 (NADH dehydrogenase subunit 7, partial [Zostera marina])

HSP 1 Score: 58.2 bits (139), Expect = 8.20e-10
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 1  GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 30
          GLD M KHHMP DVVTIIGTQDIVSGEVDR
Sbjct: 54 GLDSMSKHHMPADVVTIIGTQDIVSGEVDR 83

[Close]

BLAST of MC09g0778 vs. NCBI nr
Match: WP_207386410.1 (hypothetical protein [Frankia symbiont of Coriaria ruscifolia] >KAF3452246.1 hypothetical protein FNV43_RR08344 [Rhamnella rubrinervis] >KAF5200876.1 Nadh-quinone oxidoreductase subunit d [Thalictrum thalictroides] >PLY74499.1 hypothetical protein LSAT_7X25900 [Lactuca sativa] >PWA73516.1 niFe hydrogenase-like protein [Artemisia annua] >PLY75311.1 hypothetical protein LSAT_5X152661 [Lactuca sativa])

HSP 1 Score: 58.2 bits (139), Expect = 1.12e-09
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 1  GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 30
          GLD M KHHMP DVVTIIGTQDIVSGEVDR
Sbjct: 67 GLDSMSKHHMPADVVTIIGTQDIVSGEVDR 96

[Close]

BLAST of MC09g0778 vs. NCBI nr
Match: KAE9584312.1 (putative oxidoreductase [Lupinus albus] >KAG4906087.1 hypothetical protein JHK85_058278 [Glycine max] >KAG4914222.1 hypothetical protein JHK87_051779 [Glycine soja] >KAG4906092.1 hypothetical protein JHK85_058283 [Glycine max] >KAG4906097.1 hypothetical protein JHK85_058288 [Glycine max])

HSP 1 Score: 58.2 bits (139), Expect = 1.12e-09
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 1  GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 30
          GLD M KHHMP DVVTIIGTQDIVSGEVDR
Sbjct: 67 GLDSMSKHHMPADVVTIIGTQDIVSGEVDR 96

[Close]

BLAST of MC09g0778 vs. ExPASy TrEMBL
Match: A0A3Q7EFI8 (Complex1_49kDa domain-containing protein OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.75e-10
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0


Query: 1   GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 30
           GL+YM KHHMP DVVTIIGTQDIVSGEVDR
Sbjct: 99  GLNYMSKHHMPADVVTIIGTQDIVSGEVDR 128

[Close]

BLAST of MC09g0778 vs. ExPASy TrEMBL
Match: A0A2J6KV96 (Complex1_49kDa domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_5X16060 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.82e-10
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0


Query: 1  GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 30
          GLD M KHHMP+DVVTIIGTQDIVSGEVDR
Sbjct: 67 GLDSMSKHHMPSDVVTIIGTQDIVSGEVDR 96

[Close]

BLAST of MC09g0778 vs. ExPASy TrEMBL
Match: A0A1B3IZ13 (NAD(P)H dehydrogenase subunit H (Fragment) OS=Zostera marina OX=29655 GN=nad7 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.97e-10
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 1  GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 30
          GLD M KHHMP DVVTIIGTQDIVSGEVDR
Sbjct: 54 GLDSMSKHHMPADVVTIIGTQDIVSGEVDR 83

[Close]

BLAST of MC09g0778 vs. ExPASy TrEMBL
Match: A0A251UZT8 (Putative niFe hydrogenase-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr04g0109061 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.41e-10
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 1  GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 30
          GLD M KHHMP DVVTIIGTQDIVSGEVDR
Sbjct: 67 GLDSMSKHHMPADVVTIIGTQDIVSGEVDR 96

[Close]

BLAST of MC09g0778 vs. ExPASy TrEMBL
Match: A0A6J5THG3 (Complex1_49kDa domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS3484 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.41e-10
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 1  GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 30
          GLD M KHHMP DVVTIIGTQDIVSGEVDR
Sbjct: 67 GLDSMSKHHMPADVVTIIGTQDIVSGEVDR 96

[Close]

BLAST of MC09g0778 vs. TAIR 10
Match: ATMG00510.1 (NADH dehydrogenase subunit 7 )

HSP 1 Score: 55.8 bits (133), Expect = 6.7e-09
Identity = 26/30 (86.67%), Postives = 26/30 (86.67%), Query Frame = 0


Query: 1   GLDYMPKHHMPTDVVTIIGTQDIVSGEVDR 31
           GLD M KHHMP DVVTIIGTQDIV GEVDR
Sbjct: 365 GLDSMSKHHMPADVVTIIGTQDIVFGEVDR 394

The following BLAST results are available for this feature:

BLAST of MC09g0778 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q36450	1.9e-08	90.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX...	[more]
P93306	3.6e-07	83.33	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX...	[more]
Q37619	5.2e-06	76.67	NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii OX=3111 ...	[more]
Q9TC96	6.8e-06	80.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea O...	[more]
O21270	2.0e-05	76.67	NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Reclinomonas americana OX=48483...	[more]

BLAST of MC09g0778 vs. NCBI nr


Match Name	E-value	Identity	Description
RZC89667.1	7.63e-10	90.00	hypothetical protein C5167_035900, partial [Papaver somniferum]	[more]
PLY78981.1	7.88e-10	90.00	hypothetical protein LSAT_5X16060 [Lactuca sativa]	[more]
AOF47029.1	8.20e-10	90.00	NADH dehydrogenase subunit 7, partial [Zostera marina]	[more]
WP_207386410.1	1.12e-09	90.00	hypothetical protein [Frankia symbiont of Coriaria ruscifolia] >KAF3452246.1 hyp...	[more]
KAE9584312.1	1.12e-09	90.00	putative oxidoreductase [Lupinus albus] >KAG4906087.1 hypothetical protein JHK85...	[more]

BLAST of MC09g0778 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A3Q7EFI8	2.75e-10	90.00	Complex1_49kDa domain-containing protein OS=Solanum lycopersicum OX=4081 PE=3 SV...	[more]
A0A2J6KV96	3.82e-10	90.00	Complex1_49kDa domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_5X160...	[more]
A0A1B3IZ13	3.97e-10	90.00	NAD(P)H dehydrogenase subunit H (Fragment) OS=Zostera marina OX=29655 GN=nad7 PE...	[more]
A0A251UZT8	5.41e-10	90.00	Putative niFe hydrogenase-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_C...	[more]
A0A6J5THG3	5.41e-10	90.00	Complex1_49kDa domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_...	[more]

BLAST of MC09g0778 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00510.1	6.7e-09	86.67	NADH dehydrogenase subunit 7	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g0778.1	MC09g0778.1	mRNA