MC09g0725 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g0725
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionORF40s
LocationMC09: 6802524 .. 6802631 (+)
RNA-Seq ExpressionMC09g0725
SyntenyMC09g0725
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTCACTTTCAACCCGATTCACCACCTACGTGCCCTTTACTCCCCGTCATTCCGAAGAACACTTGCCCCCCC

mRNA sequence

ATGAGTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTCACTTTCAACCCGATTCACCACCTACGTGCCCTTTACTCCCCGTCATTCCGAAGAACACTTGCCCCCCC

Coding sequence (CDS)

ATGAGTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTCACTTTCAACCCGATTCACCACCTACGTGCCCTTTACTCCCCGTCATTCCGAAGAACACTTGCCCCCCC

Protein sequence

MSFESIPPVFGDFHFQPDSPPTCPLLPVIPKNTCPP
Homology
BLAST of MC09g0725 vs. NCBI nr
Match: GFA98036.1 (ribosomal protein S10 [Tanacetum cinerariifolium])

HSP 1 Score: 70.5 bits (171), Expect = 3.18e-13
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0

Query: 2   SFESIPPVFGDFHFQPDSPPTCPLLPVIPKNTCPP 36
           +FESIPP+FGDFHFQ DSPPTCPL PVIPKNTCPP
Sbjct: 154 NFESIPPLFGDFHFQLDSPPTCPLRPVIPKNTCPP 188

BLAST of MC09g0725 vs. NCBI nr
Match: PPD92383.1 (hypothetical protein GOBAR_DD10686 [Gossypium barbadense])

HSP 1 Score: 69.3 bits (168), Expect = 4.09e-13
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0

Query: 6   IPPVFGDFHFQPDSPPTCPLLPVIPKNTCPP 36
           IPPVFGDFHFQPDSPPTCPL PVIPKNTCPP
Sbjct: 75  IPPVFGDFHFQPDSPPTCPLRPVIPKNTCPP 105

BLAST of MC09g0725 vs. NCBI nr
Match: PPE01242.1 (hypothetical protein GOBAR_DD01736 [Gossypium barbadense])

HSP 1 Score: 69.3 bits (168), Expect = 9.66e-13
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0

Query: 6   IPPVFGDFHFQPDSPPTCPLLPVIPKNTCPP 36
           IPPVFGDFHFQPDSPPTCPL PVIPKNTCPP
Sbjct: 84  IPPVFGDFHFQPDSPPTCPLRPVIPKNTCPP 114

BLAST of MC09g0725 vs. NCBI nr
Match: PPR89027.1 (hypothetical protein GOBAR_AA31647 [Gossypium barbadense])

HSP 1 Score: 69.3 bits (168), Expect = 1.85e-12
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0

Query: 6  IPPVFGDFHFQPDSPPTCPLLPVIPKNTCPP 36
          IPPVFGDFHFQPDSPPTCPL PVIPKNTCPP
Sbjct: 69 IPPVFGDFHFQPDSPPTCPLRPVIPKNTCPP 99

BLAST of MC09g0725 vs. NCBI nr
Match: KAD4385743.1 (hypothetical protein E3N88_25912 [Mikania micrantha])

HSP 1 Score: 68.2 bits (165), Expect = 2.45e-12
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 0

Query: 6  IPPVFGDFHFQPDSPPTCPLLPVIPKNTCPP 36
          IPP+FGDFHFQPDSPPTCPL PVIPKNTCPP
Sbjct: 56 IPPLFGDFHFQPDSPPTCPLRPVIPKNTCPP 86

BLAST of MC09g0725 vs. ExPASy TrEMBL
Match: A0A2P5WD91 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA31647 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 8.95e-13
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0

Query: 6  IPPVFGDFHFQPDSPPTCPLLPVIPKNTCPP 36
          IPPVFGDFHFQPDSPPTCPL PVIPKNTCPP
Sbjct: 69 IPPVFGDFHFQPDSPPTCPLRPVIPKNTCPP 99

BLAST of MC09g0725 vs. ExPASy TrEMBL
Match: A0A5N6N7T2 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_25912 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.19e-12
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 0

Query: 6  IPPVFGDFHFQPDSPPTCPLLPVIPKNTCPP 36
          IPP+FGDFHFQPDSPPTCPL PVIPKNTCPP
Sbjct: 56 IPPLFGDFHFQPDSPPTCPLRPVIPKNTCPP 86

BLAST of MC09g0725 vs. ExPASy TrEMBL
Match: A0A5A7V0C9 (ORF40s OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44334G00020 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.22e-11
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0

Query: 6  IPPVFGDFHFQPDSPPTCPLLPVIPKNTCPP 36
          IPPVFGD +FQPDSPPTCPL PVIPKNTCPP
Sbjct: 67 IPPVFGDLNFQPDSPPTCPLRPVIPKNTCPP 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GFA98036.13.18e-1388.57ribosomal protein S10 [Tanacetum cinerariifolium][more]
PPD92383.14.09e-1396.77hypothetical protein GOBAR_DD10686 [Gossypium barbadense][more]
PPE01242.19.66e-1396.77hypothetical protein GOBAR_DD01736 [Gossypium barbadense][more]
PPR89027.11.85e-1296.77hypothetical protein GOBAR_AA31647 [Gossypium barbadense][more]
KAD4385743.12.45e-1293.55hypothetical protein E3N88_25912 [Mikania micrantha][more]
Match NameE-valueIdentityDescription
A0A2P5WD918.95e-1396.77Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA31647 PE=4 SV... [more]
A0A5N6N7T21.19e-1293.55Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_25912 PE=4 SV=1[more]
A0A5A7V0C91.22e-1190.32ORF40s OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44334G00020 PE=4 ... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g0725.1MC09g0725.1mRNA