MC09g0624 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0624
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Pentatricopeptide repeat-containing protein
Location	MC09: 5701512 .. 5701989 (+)
RNA-Seq Expression	MC09g0624
Synteny	MC09g0624

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTCCAGGCAATGAAAGAGACTAATGTCTTTACTTGGAATGCACTCATTAAAGGGCTAGCTTTGGCCAAGAGTGGAGAGGAGGTCATTGCCTGGTTTAAGAGAAGTGATGAAGAAGGATTTGAGGCTGATGAACTGACATTAGTGGCAGTGCTTTGTGCTTGTAGCCACTCCAGATTGGTGGACAAGGGCAGGGAGATCTTTCGAGCCTTGGTCGATGGGAGCTACGGGTTTTCTCCCGAAATCAAACATTATTCATGTATGGTAGATCTCTTGGCACGTTCAGGGTGTATTGAGGAAGCTTTTGTGTTGATAAAAGATGTCCTTTGATGCTACCAAAGCAATGTGGGGGTCTTTGTTAGTTGGTGGTAGGGCTAATGGGAGCTTGGAAGTGAGCGAGTTTGCAGCAAGGAAGCTTGTTGAAATCGAGCCAGAGAATGGTGCATATTATGTTGTGTTGTCTAATATTCTTGCAGAG

mRNA sequence

GTTTTCCAGGCAATGAAAGAGACTAATGTCTTTACTTGGAATGCACTCATTAAAGGGCTAGCTTTGGCCAAGAGTGGAGAGGAGGTCATTGCCTGGTTTAAGAGAAGTGATGAAGAAGGATTTGAGGCTGATGAACTGACATTAGTGGCAGTGCTTTGTGCTTGTAGCCACTCCAGATTGGTGGACAAGGGCAGGGAGATCTTTCGAGCCTTGGTCGATGGGAGCTACGGGTTTTCTCCCGAAATCAAACATTATTCATGTATGGTAGATCTCTTGGCACGTTCAGGGTGTATTGAGGAAGCTTTTGTGTTGATAAAAATGTCCTTTGATGCTACCAAAGCAATGTGGGGGTCTTTGTTAGTTGGTGGTAGGGCTAATGGGAGCTTGGAAGTGAGCGAGTTTGCAGCAAGGAAGCTTGTTGAAATCGAGCCAGAGAATGGTGCATATTATGTTGTGTTGTCTAATATTCTTGCAGAG

Coding sequence (CDS)

GTTTTCCAGGCAATGAAAGAGACTAATGTCTTTACTTGGAATGCACTCATTAAAGGGCTAGCTTTGGCCAAGAGTGGAGAGGAGGTCATTGCCTGGTTTAAGAGAAGTGATGAAGAAGGATTTGAGGCTGATGAACTGACATTAGTGGCAGTGCTTTGTGCTTGTAGCCACTCCAGATTGGTGGACAAGGGCAGGGAGATCTTTCGAGCCTTGGTCGATGGGAGCTACGGGTTTTCTCCCGAAATCAAACATTATTCATGTATGGTAGATCTCTTGGCACGTTCAGGGTGTATTGAGGAAGCTTTTGTGTTGATAAAAATGTCCTTTGATGCTACCAAAGCAATGTGGGGGTCTTTGTTAGTTGGTGGTAGGGCTAATGGGAGCTTGGAAGTGAGCGAGTTTGCAGCAAGGAAGCTTGTTGAAATCGAGCCAGAGAATGGTGCATATTATGTTGTGTTGTCTAATATTCTTGCAGAG

Protein sequence

VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRLVDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIKMSFDATKAMWGSLLVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILAE

Homology

[Close]

BLAST of MC09g0624 vs. ExPASy Swiss-Prot
Match: Q9LZ19 (Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 141.4 bits (355), Expect = 9.1e-33
Identity = 69/159 (43.40%), Postives = 104/159 (65.41%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           +F  ++E N+  WN +I G A     +EV+  F++  ++G   +E+T  ++L  C H+ L
Sbjct: 320 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 379

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGSL 120
           V++GR  F+ L+  +YG SP + HYSCMVD+L R+G + EA+ LIK + FD T ++WGSL
Sbjct: 380 VEEGRRFFK-LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 439

Query: 121 LVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILA 159
           L   R   +LE++E AA KL E+EPEN   +V+LSNI A
Sbjct: 440 LASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYA 477

[Close]

BLAST of MC09g0624 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-32
Identity = 69/159 (43.40%), Postives = 102/159 (64.15%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           +F+ M   ++ +WN +I G +    GE  + +F+    EG + D+ T+VAVL ACSH+ L
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGSL 120
           VDKGR+ F  +    YG  P  +HY+CMVDLL R+G +E+A  L+K M F+   A+WG+L
Sbjct: 526 VDKGRQYFYTMTQ-DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTL 585

Query: 121 LVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILA 159
           L   R +G+ E++E AA K+  +EPEN   YV+LSN+ A
Sbjct: 586 LGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 623

[Close]

BLAST of MC09g0624 vs. ExPASy Swiss-Prot
Match: Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.2e-30
Identity = 65/157 (41.40%), Postives = 95/157 (60.51%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           VF+ + E NV TW  +I GLA    G E +A F R  + G   +++T +A+L ACSH   
Sbjct: 307 VFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGW 366

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGSL 120
           VD G+ +F ++    YG  P I+HY CM+DLL R+G + EA  +IK M F A  A+WGSL
Sbjct: 367 VDLGKRLFNSM-RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSL 426

Query: 121 LVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNI 157
           L     +  LE+ E A  +L+++EP N   Y++L+N+
Sbjct: 427 LAASNVHHDLELGERALSELIKLEPNNSGNYMLLANL 462

[Close]

BLAST of MC09g0624 vs. ExPASy Swiss-Prot
Match: Q9LIC3 (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-29
Identity = 69/160 (43.12%), Postives = 96/160 (60.00%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFK-RSDEEGFEADELTLVAVLCACSHSR 60
           +F  M E    +WNA++ G +    G EV+  F+   DE+  + D +TL+AVL  CSH R
Sbjct: 311 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGR 370

Query: 61  LVDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGS 120
           + D G  IF  +V G YG  P  +HY C+VD+L R+G I+EAF  IK M    T  + GS
Sbjct: 371 MEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGS 430

Query: 121 LLVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILA 159
           LL   R + S+++ E   R+L+EIEPEN   YV+LSN+ A
Sbjct: 431 LLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYA 470

[Close]

BLAST of MC09g0624 vs. ExPASy Swiss-Prot
Match: Q9SR01 (Pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E81 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.6e-29
Identity = 68/160 (42.50%), Postives = 99/160 (61.88%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           VF+   E +V  W ++I GLA   +G++ +  F R  EEG   + +TL+AVL ACSHS L
Sbjct: 425 VFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGL 484

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEA--FVLIKMSFDATKAMWGS 120
           V++G  +F  + D  +GF PE +HY  +VDLL R+G +EEA   V  KM    +++MWGS
Sbjct: 485 VEEGLHVFNHMKD-KFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGS 544

Query: 121 LLVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILA 159
           +L   R    +E +E A  +L+++EPE    YV+LSNI A
Sbjct: 545 ILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYA 583

[Close]

BLAST of MC09g0624 vs. NCBI nr
Match: XP_022149927.1 (pentatricopeptide repeat-containing protein At5g56310-like isoform X2 [Momordica charantia])

HSP 1 Score: 290 bits (741), Expect = 6.67e-94
Identity = 147/160 (91.88%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           VFQAMKE NVFTWNALIKGLALAKSGEE IAWFKR DEEG EADE+TLVAVLCACSHS L
Sbjct: 270 VFQAMKEKNVFTWNALIKGLALAKSGEEAIAWFKRMDEEGVEADEVTLVAVLCACSHSGL 329

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGSL 120
           V+KGREIFRALVDGSYGFSP IKH+SCMVDLLARSGCIEEAFVLIK M FDATKAMWGSL
Sbjct: 330 VNKGREIFRALVDGSYGFSPGIKHFSCMVDLLARSGCIEEAFVLIKDMPFDATKAMWGSL 389

Query: 121 LVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILAE 159
           L GGRANGSLEVSEFAARKLVE+EPENGAYYVVLSNILAE
Sbjct: 390 LAGGRANGSLEVSEFAARKLVEMEPENGAYYVVLSNILAE 429

[Close]

BLAST of MC09g0624 vs. NCBI nr
Match: XP_022149919.1 (pentatricopeptide repeat-containing protein At1g09190-like isoform X1 [Momordica charantia])

HSP 1 Score: 290 bits (741), Expect = 6.78e-93
Identity = 147/160 (91.88%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           VFQAMKE NVFTWNALIKGLALAKSGEE IAWFKR DEEG EADE+TLVAVLCACSHS L
Sbjct: 354 VFQAMKEKNVFTWNALIKGLALAKSGEEAIAWFKRMDEEGVEADEVTLVAVLCACSHSGL 413

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGSL 120
           V+KGREIFRALVDGSYGFSP IKH+SCMVDLLARSGCIEEAFVLIK M FDATKAMWGSL
Sbjct: 414 VNKGREIFRALVDGSYGFSPGIKHFSCMVDLLARSGCIEEAFVLIKDMPFDATKAMWGSL 473

Query: 121 LVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILAE 159
           L GGRANGSLEVSEFAARKLVE+EPENGAYYVVLSNILAE
Sbjct: 474 LAGGRANGSLEVSEFAARKLVEMEPENGAYYVVLSNILAE 513

[Close]

BLAST of MC09g0624 vs. NCBI nr
Match: KAA0068017.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18111.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 263 bits (673), Expect = 7.89e-85
Identity = 129/160 (80.62%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           VFQAMKE NV+TWN LI GLALAKSGEE IAWFKR DEEG EAD++TLVAVLCACSHS L
Sbjct: 168 VFQAMKEKNVYTWNVLINGLALAKSGEEAIAWFKRMDEEGVEADDVTLVAVLCACSHSGL 227

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGSL 120
           V+ GR+IFR+L+ G +GFSPEIKHYSCMVD+LAR+GCIEEAFV+IK M F+ATKAMWGSL
Sbjct: 228 VNSGRQIFRSLIHGRFGFSPEIKHYSCMVDILARNGCIEEAFVMIKDMPFEATKAMWGSL 287

Query: 121 LVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILAE 159
           L G RA+G+LEVSE AARKLVE+EPENGAYYVVLSNI AE
Sbjct: 288 LTGSRAHGNLEVSEIAARKLVEMEPENGAYYVVLSNIYAE 327

[Close]

BLAST of MC09g0624 vs. NCBI nr
Match: XP_008451605.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like [Cucumis melo])

HSP 1 Score: 263 bits (673), Expect = 1.39e-83
Identity = 129/160 (80.62%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           VFQAMKE NV+TWN LI GLALAKSGEE IAWFKR DEEG EAD++TLVAVLCACSHS L
Sbjct: 268 VFQAMKEKNVYTWNVLINGLALAKSGEEAIAWFKRMDEEGVEADDVTLVAVLCACSHSGL 327

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGSL 120
           V+ GR+IFR+L+ G +GFSPEIKHYSCMVD+LAR+GCIEEAFV+IK M F+ATKAMWGSL
Sbjct: 328 VNSGRQIFRSLIHGRFGFSPEIKHYSCMVDILARNGCIEEAFVMIKDMPFEATKAMWGSL 387

Query: 121 LVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILAE 159
           L G RA+G+LEVSE AARKLVE+EPENGAYYVVLSNI AE
Sbjct: 388 LTGSRAHGNLEVSEIAARKLVEMEPENGAYYVVLSNIYAE 427

[Close]

BLAST of MC09g0624 vs. NCBI nr
Match: KAG6575842.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014378.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256 bits (654), Expect = 8.49e-81
Identity = 129/161 (80.12%), Postives = 142/161 (88.20%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEG-FEADELTLVAVLCACSHSR 60
           VFQAMK+ NV+TWNALI GLALAKSGEE IAWFKR +EEG  EADE+TLVAVLCACSHS 
Sbjct: 268 VFQAMKDKNVYTWNALINGLALAKSGEEAIAWFKRMNEEGGIEADEVTLVAVLCACSHSG 327

Query: 61  LVDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGS 120
           LVD GR+IF +++DG +GFSP I+HYSCMVDLLARSGCIEE+F LIK M FDATKAMWGS
Sbjct: 328 LVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLLARSGCIEESFELIKNMPFDATKAMWGS 387

Query: 121 LLVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILAE 159
           LL G RA GSLE+SEFAARKLVE+EPENGAYY VLSNI AE
Sbjct: 388 LLAGSRAQGSLEMSEFAARKLVEMEPENGAYYAVLSNICAE 428

[Close]

BLAST of MC09g0624 vs. ExPASy TrEMBL
Match: A0A6J1D9C2 (pentatricopeptide repeat-containing protein At5g56310-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018217 PE=4 SV=1)

HSP 1 Score: 290 bits (741), Expect = 3.23e-94
Identity = 147/160 (91.88%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           VFQAMKE NVFTWNALIKGLALAKSGEE IAWFKR DEEG EADE+TLVAVLCACSHS L
Sbjct: 270 VFQAMKEKNVFTWNALIKGLALAKSGEEAIAWFKRMDEEGVEADEVTLVAVLCACSHSGL 329

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGSL 120
           V+KGREIFRALVDGSYGFSP IKH+SCMVDLLARSGCIEEAFVLIK M FDATKAMWGSL
Sbjct: 330 VNKGREIFRALVDGSYGFSPGIKHFSCMVDLLARSGCIEEAFVLIKDMPFDATKAMWGSL 389

Query: 121 LVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILAE 159
           L GGRANGSLEVSEFAARKLVE+EPENGAYYVVLSNILAE
Sbjct: 390 LAGGRANGSLEVSEFAARKLVEMEPENGAYYVVLSNILAE 429

[Close]

BLAST of MC09g0624 vs. ExPASy TrEMBL
Match: A0A6J1D8G0 (pentatricopeptide repeat-containing protein At1g09190-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018217 PE=4 SV=1)

HSP 1 Score: 290 bits (741), Expect = 3.28e-93
Identity = 147/160 (91.88%), Postives = 151/160 (94.38%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           VFQAMKE NVFTWNALIKGLALAKSGEE IAWFKR DEEG EADE+TLVAVLCACSHS L
Sbjct: 354 VFQAMKEKNVFTWNALIKGLALAKSGEEAIAWFKRMDEEGVEADEVTLVAVLCACSHSGL 413

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGSL 120
           V+KGREIFRALVDGSYGFSP IKH+SCMVDLLARSGCIEEAFVLIK M FDATKAMWGSL
Sbjct: 414 VNKGREIFRALVDGSYGFSPGIKHFSCMVDLLARSGCIEEAFVLIKDMPFDATKAMWGSL 473

Query: 121 LVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILAE 159
           L GGRANGSLEVSEFAARKLVE+EPENGAYYVVLSNILAE
Sbjct: 474 LAGGRANGSLEVSEFAARKLVEMEPENGAYYVVLSNILAE 513

[Close]

BLAST of MC09g0624 vs. ExPASy TrEMBL
Match: A0A5A7VLB7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00340 PE=4 SV=1)

HSP 1 Score: 263 bits (673), Expect = 3.82e-85
Identity = 129/160 (80.62%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           VFQAMKE NV+TWN LI GLALAKSGEE IAWFKR DEEG EAD++TLVAVLCACSHS L
Sbjct: 168 VFQAMKEKNVYTWNVLINGLALAKSGEEAIAWFKRMDEEGVEADDVTLVAVLCACSHSGL 227

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGSL 120
           V+ GR+IFR+L+ G +GFSPEIKHYSCMVD+LAR+GCIEEAFV+IK M F+ATKAMWGSL
Sbjct: 228 VNSGRQIFRSLIHGRFGFSPEIKHYSCMVDILARNGCIEEAFVMIKDMPFEATKAMWGSL 287

Query: 121 LVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILAE 159
           L G RA+G+LEVSE AARKLVE+EPENGAYYVVLSNI AE
Sbjct: 288 LTGSRAHGNLEVSEIAARKLVEMEPENGAYYVVLSNIYAE 327

[Close]

BLAST of MC09g0624 vs. ExPASy TrEMBL
Match: A0A1S3BRY1 (pentatricopeptide repeat-containing protein At5g56310-like OS=Cucumis melo OX=3656 GN=LOC103492838 PE=4 SV=1)

HSP 1 Score: 263 bits (673), Expect = 6.72e-84
Identity = 129/160 (80.62%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           VFQAMKE NV+TWN LI GLALAKSGEE IAWFKR DEEG EAD++TLVAVLCACSHS L
Sbjct: 268 VFQAMKEKNVYTWNVLINGLALAKSGEEAIAWFKRMDEEGVEADDVTLVAVLCACSHSGL 327

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGSL 120
           V+ GR+IFR+L+ G +GFSPEIKHYSCMVD+LAR+GCIEEAFV+IK M F+ATKAMWGSL
Sbjct: 328 VNSGRQIFRSLIHGRFGFSPEIKHYSCMVDILARNGCIEEAFVMIKDMPFEATKAMWGSL 387

Query: 121 LVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILAE 159
           L G RA+G+LEVSE AARKLVE+EPENGAYYVVLSNI AE
Sbjct: 388 LTGSRAHGNLEVSEIAARKLVEMEPENGAYYVVLSNIYAE 427

[Close]

BLAST of MC09g0624 vs. ExPASy TrEMBL
Match: A0A6J1JWL5 (pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita maxima OX=3661 GN=LOC111488140 PE=4 SV=1)

HSP 1 Score: 254 bits (649), Expect = 2.32e-80
Identity = 128/161 (79.50%), Postives = 140/161 (86.96%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEG-FEADELTLVAVLCACSHSR 60
           VFQAMK+ NV+TWNALI GLALAKSGEE IAWFKR DE G  EADE+TLV VLCACSHS 
Sbjct: 268 VFQAMKDKNVYTWNALINGLALAKSGEEAIAWFKRMDEGGGVEADEVTLVTVLCACSHSG 327

Query: 61  LVDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGS 120
           LVD GR+IF +++DG +GFSP I+HYSCMVDLLARSGCIEE+F LIK M FDATKAMWGS
Sbjct: 328 LVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLLARSGCIEESFELIKNMPFDATKAMWGS 387

Query: 121 LLVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILAE 159
           LL G RA GSLE+SEFAARKLVE+EPENGAYY VLSNI AE
Sbjct: 388 LLAGSRAQGSLEISEFAARKLVEMEPENGAYYAVLSNICAE 428

[Close]

BLAST of MC09g0624 vs. TAIR 10
Match: AT5G04780.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 6.5e-34
Identity = 69/159 (43.40%), Postives = 104/159 (65.41%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           +F  ++E N+  WN +I G A     +EV+  F++  ++G   +E+T  ++L  C H+ L
Sbjct: 320 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 379

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGSL 120
           V++GR  F+ L+  +YG SP + HYSCMVD+L R+G + EA+ LIK + FD T ++WGSL
Sbjct: 380 VEEGRRFFK-LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 439

Query: 121 LVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILA 159
           L   R   +LE++E AA KL E+EPEN   +V+LSNI A
Sbjct: 440 LASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYA 477

[Close]

BLAST of MC09g0624 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 2.5e-33
Identity = 69/159 (43.40%), Postives = 102/159 (64.15%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           +F+ M   ++ +WN +I G +    GE  + +F+    EG + D+ T+VAVL ACSH+ L
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGSL 120
           VDKGR+ F  +    YG  P  +HY+CMVDLL R+G +E+A  L+K M F+   A+WG+L
Sbjct: 526 VDKGRQYFYTMTQ-DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTL 585

Query: 121 LVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILA 159
           L   R +G+ E++E AA K+  +EPEN   YV+LSN+ A
Sbjct: 586 LGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 623

[Close]

BLAST of MC09g0624 vs. TAIR 10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 2.3e-31
Identity = 65/157 (41.40%), Postives = 95/157 (60.51%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           VF+ + E NV TW  +I GLA    G E +A F R  + G   +++T +A+L ACSH   
Sbjct: 307 VFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGW 366

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGSL 120
           VD G+ +F ++    YG  P I+HY CM+DLL R+G + EA  +IK M F A  A+WGSL
Sbjct: 367 VDLGKRLFNSM-RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSL 426

Query: 121 LVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNI 157
           L     +  LE+ E A  +L+++EP N   Y++L+N+
Sbjct: 427 LAASNVHHDLELGERALSELIKLEPNNSGNYMLLANL 462

[Close]

BLAST of MC09g0624 vs. TAIR 10
Match: AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 8.7e-31
Identity = 69/160 (43.12%), Postives = 96/160 (60.00%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFK-RSDEEGFEADELTLVAVLCACSHSR 60
           +F  M E    +WNA++ G +    G EV+  F+   DE+  + D +TL+AVL  CSH R
Sbjct: 311 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGR 370

Query: 61  LVDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEAFVLIK-MSFDATKAMWGS 120
           + D G  IF  +V G YG  P  +HY C+VD+L R+G I+EAF  IK M    T  + GS
Sbjct: 371 MEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGS 430

Query: 121 LLVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILA 159
           LL   R + S+++ E   R+L+EIEPEN   YV+LSN+ A
Sbjct: 431 LLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYA 470

[Close]

BLAST of MC09g0624 vs. TAIR 10
Match: AT3G04750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-30
Identity = 68/160 (42.50%), Postives = 99/160 (61.88%), Query Frame = 0


Query: 1   VFQAMKETNVFTWNALIKGLALAKSGEEVIAWFKRSDEEGFEADELTLVAVLCACSHSRL 60
           VF+   E +V  W ++I GLA   +G++ +  F R  EEG   + +TL+AVL ACSHS L
Sbjct: 425 VFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGL 484

Query: 61  VDKGREIFRALVDGSYGFSPEIKHYSCMVDLLARSGCIEEA--FVLIKMSFDATKAMWGS 120
           V++G  +F  + D  +GF PE +HY  +VDLL R+G +EEA   V  KM    +++MWGS
Sbjct: 485 VEEGLHVFNHMKD-KFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGS 544

Query: 121 LLVGGRANGSLEVSEFAARKLVEIEPENGAYYVVLSNILA 159
           +L   R    +E +E A  +L+++EPE    YV+LSNI A
Sbjct: 545 ILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYA 583

The following BLAST results are available for this feature:

BLAST of MC09g0624 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ19	9.1e-33	43.40	Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidop...	[more]
Q9SY02	3.5e-32	43.40	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q9FMA1	3.2e-30	41.40	Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX...	[more]
Q9LIC3	1.2e-29	43.13	Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS...	[more]
Q9SR01	1.6e-29	42.50	Pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Arabidop...	[more]

BLAST of MC09g0624 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149927.1	6.67e-94	91.88	pentatricopeptide repeat-containing protein At5g56310-like isoform X2 [Momordica...	[more]
XP_022149919.1	6.78e-93	91.88	pentatricopeptide repeat-containing protein At1g09190-like isoform X1 [Momordica...	[more]
KAA0068017.1	7.89e-85	80.63	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18111...	[more]
XP_008451605.1	1.39e-83	80.63	PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like [Cucumis m...	[more]
KAG6575842.1	8.49e-81	80.12	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of MC09g0624 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9C2	3.23e-94	91.88	pentatricopeptide repeat-containing protein At5g56310-like isoform X2 OS=Momordi...	[more]
A0A6J1D8G0	3.28e-93	91.88	pentatricopeptide repeat-containing protein At1g09190-like isoform X1 OS=Momordi...	[more]
A0A5A7VLB7	3.82e-85	80.63	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BRY1	6.72e-84	80.63	pentatricopeptide repeat-containing protein At5g56310-like OS=Cucumis melo OX=36...	[more]
A0A6J1JWL5	2.32e-80	79.50	pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita maxima O...	[more]

BLAST of MC09g0624 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04780.1	6.5e-34	43.40	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G02750.1	2.5e-33	43.40	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G56310.1	2.3e-31	41.40	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G13770.1	8.7e-31	43.13	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G04750.1	1.1e-30	42.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 11..41 e-value: 0.0011 score: 19.1 coord: 84..106 e-value: 0.022 score: 15.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 11..45 e-value: 6.5E-5 score: 20.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 9..43 score: 9.141782
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..159 e-value: 6.6E-22 score: 80.3
None	No IPR available	PANTHER	PTHR47924:SF31	SUBFAMILY NOT NAMED	coord: 1..159
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 1..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g0624.1	MC09g0624.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006749	glutathione metabolic process
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding