MC09g0604 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0604
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	serine/arginine-rich-splicing factor SR34-like
Location	MC09: 5529863 .. 5532986 (+)
RNA-Seq Expression	MC09g0604
Synteny	MC09g0604

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGATACAGATTATCATAACCGTACCATATATTTACGACTGCTACCTAACCTTCGATTTCTAAACCCTAACTCCTTTCGCCTCTGCGTTTCGTCCTTGCCAGATCGAATTCGAGGTAATCTTCCATCAAACGCCGAATTTGATTAATTCGTTAATTTCAATACAGAATGCTCTTCGAGTTTAATCTTAATCGAGGTTTAGATTTATGGTTCCTGATTTATCTCTCTTCGTTTCATGTTGGATGCAATCGATAATGTTTTTTGTTTCTACGTTTAATTCGTTTAGGGGAAAATGAGTAGCCGTGCCAGCAGAACGGTCTATGTGGGAAATCTCCCGGGTGATATTCGTGAAAAAGAAGTGGAGGATTTATTTTACAAGGTAATTCTTCGTAATTTTGCATGCGCGTGATGGGATTTTGGTGAGTGAAGTTGTTTAGAGTATTTTAGCCCTTTATTACGGGGAGCGCGTAAATAATGCAATAGTCTGTCTTTTTTCGTTGGATGGTTTGTTTGTTGGATTTTATTTCTTCAGTGGAATGGATATTGTGAAGTGATACTCATGTAAGAGGCAGTGCAAGCGTAGAATGATGAAAGTTTTGATTCTGAGAATGTGTGGAAGGGTGTGTGATGAGCTTACAAATACAGGAGTAACAATCACTTCTAAATTATTGACGCACATTTTGTGGTTTTTCTTTCTTTAGTTGTTCAAGGTGATCTGGGATAAGATTAAAATAATTTTGGACTTGGAGTTTTATTTGTTGAAACTATCTAATTTCAATATATTCTCATTCGGCAATTTTATTGCAGTATGGACGCATAGCTCACATTGATCTCAAGGTTCCACCAAGACCTCCTGGTTATGCATTTGTTGAGGTGAGCTTATTGCACATGAAATGCCATATTCTCTTCCTTTTTAATACTTGTTACTTATCTACTCAATATGGATTGCGTGAATGTAGTTCGAAGATGCAGAAGATGCTCAAGATGCTATTCGTGGTCGTGATGGCTATGATTTTGATGGGCACAGGTTACGTGTGAGTTACTAACCTAGTCTATTTATATTTTTTCATAACTTGGTTGTTTTTGTACTTCACTGCTTTACAGTTATAATTTATGCAGCATTTGTTTGTGTGTGTTTGTAGGTGGAACTTGCTCATGGTGGTCGTGGTCATTCTTCATCTAGTGATCGTTATAGTAGTCATGGAGGAAGCCGTGGTGGGCGTGGAGTATCTAGGCGCTCTGATTATCGTGGTATCTACCCATTTCTTGGACACACCATACAATGTTTTGACATTTTAAACATAGGTTGTGATAATATATATATTTTTTGTTCATGCAGTATTAGTCACAGGATTACCTTCTTCCGCCTCATGGCAAGATTTAAAGGTAAGTTTCATTCCATTTGACATGAAATGTATGTTCCCTAGTTTTTCTGATTAACATGTCCATCATGTTATTTAATATTGAAGGATCACATGCGGCGAGCTGGGGATGTTTGTTTCTCCCAAGTGTTTCGTGATGGTAGTGGTAAGATACATTCTGATGGTGCTGGCTTCAAATTCTTAATAATGTGGTGCTGATAACTAAATAGGAACTATTTATTTGTTTGTGTTGTAGGAACTACAGGGATCGTGGACTACACTAACTATGATGACATGAAATATGCAGTAAGTTGTTTTCATTTCTGATCTATGACGTTTGAAATGTTAACTTAATGAGTCTGGGAGCTTAAGTTTTGGTTTGCTGATTTGCTTTGCTATTTGTTTATTTGTCATTGCAGATTAAAAAACTTGATGATTCTGAGTTCCGAAATGCATTTTCTCGGTCATATGTTCGTGTATGAACTATAATACCTTCTTGTTCTGTAAACTATTTTTCTTTATGAATGTCTTGTTTCTCATCTATTTTAATTTTGCTTTTGATAGGTGAGAGAATATGATTCAAAGAGGGATCTCTCCAGGAGCCCTAGTCGTGGGCGGTCACACTCTAGAGGGAGGAGTTATAGTCGCAGTCGTAGTAGAGGCCGTAGTAGGAGCAAGAGCCGCAGTAGGAGGTTGGTTTATTTTTTAATATTAAATTAGTCTTCCATTTTTTTTTAATTGTATTAAATCCTTTATTAACTTTTGAGCAGCAAGTCTCCAAAAGCCAAATCTTCCCAGCGGTCACCTGTTAAATCCCGATCGAGGTCTGCTTCCCCTGCTCGCTCCCGGTCAAAGTCATCATCTCTTTCAGGGTATGTGTTCTCATTTTGTAAATTATTGTCATTCATTCTCGTGATCCTTAGTTTATTTTATTTTTATCTAACTGCTGTCTGCTCATTGTTTATCTATATATTTATATGATTCGAGTTTGTTGTCACTCTAGCAGGGTCTGTTTGTTGCACCCGTCTTTCATTGGACAGAATGTTAGACTGGGTGAAATAAACAGCATAAAAGTACTGAAAGTGAACTAATTCTTTGTATTGCTCAAGCACGGGTCAGCAAGGGGTTTTAAATTTAGCAATGGATTTGAAATTACATTACCGGATGCAATGTGTTTGCATGTGGTATTGTGGCTTGTACAATTCTCTTGAATGTGAAACCCACCCTTTTCTTCCAAAGTCTTGGATGCATTCTGGGAATGGTGGACATGAATACTGGACAGGCTTCAAATTAGTTTGGGCAATGTGTGGGACCCTCTATTGGAATGTTGGGTAAACTTTATTCCATTTGACTCAATTCAGTTATTACTGTTTCACATCTGATTCTGCTTTCTTTTTTGTAACTTGTCTTGGCCTTCCCCTTTATCATTAATGAATGTTTTCGTTCAACAACTGGGATACCTACAAAATGAATCGATTTCTTTCATTCATTTTCCTTTTTGTGTGTGAAAATTACTTGTTTGTTTTTTAGATATGGAAATATGCGGCATACTGGGGATTGGATATTAGGATCTTGATGGGATATGATTCAATTGCCTTCAATGCTTTTGGTTGAGAAGGTATGCTGTTTTTTAGATGGGCAGCTTTGAAAACCTTCTGGTACCTCTGTTCTAATGCTTTTAGCAATGCAATGTCCATGGGTGCTAGATTGGGATCAAAGGAGATCATGGATTGCAAAAATAGAGCTGGATATCTTGAACTAAGT

mRNA sequence

CGCGATACAGATTATCATAACCGTACCATATATTTACGACTGCTACCTAACCTTCGATTTCTAAACCCTAACTCCTTTCGCCTCTGCGTTTCGTCCTTGCCAGATCGAATTCGAGGGGAAAATGAGTAGCCGTGCCAGCAGAACGGTCTATGTGGGAAATCTCCCGGGTGATATTCGTGAAAAAGAAGTGGAGGATTTATTTTACAAGTATGGACGCATAGCTCACATTGATCTCAAGGTTCCACCAAGACCTCCTGGTTATGCATTTGTTGAGTTCGAAGATGCAGAAGATGCTCAAGATGCTATTCGTGGTCGTGATGGCTATGATTTTGATGGGCACAGGTTACGTGTGGAACTTGCTCATGGTGGTCGTGGTCATTCTTCATCTAGTGATCGTTATAGTAGTCATGGAGGAAGCCGTGGTGGGCGTGGAGTATCTAGGCGCTCTGATTATCGTGTATTAGTCACAGGATTACCTTCTTCCGCCTCATGGCAAGATTTAAAGGATCACATGCGGCGAGCTGGGGATGTTTGTTTCTCCCAAGTGTTTCGTGATGGTAGTGGAACTACAGGGATCGTGGACTACACTAACTATGATGACATGAAATATGCAATTAAAAAACTTGATGATTCTGAGTTCCGAAATGCATTTTCTCGGTCATATGTTCGTGTGAGAGAATATGATTCAAAGAGGGATCTCTCCAGGAGCCCTAGTCGTGGGCGGTCACACTCTAGAGGGAGGAGTTATAGTCGCAGTCGTAGTAGAGGCCGTAGTAGGAGCAAGAGCCGCAGTAGGAGCAAGTCTCCAAAAGCCAAATCTTCCCAGCGGTCACCTGTTAAATCCCGATCGAGGTCTGCTTCCCCTGCTCGCTCCCGGTCAAAGTCATCATCTCTTTCAGGATGGGCAGCTTTGAAAACCTTCTGGTACCTCTGTTCTAATGCTTTTAGCAATGCAATGTCCATGGGTGCTAGATTGGGATCAAAGGAGATCATGGATTGCAAAAATAGAGCTGGATATCTTGAACTAAGT

Coding sequence (CDS)

ATGAGTAGCCGTGCCAGCAGAACGGTCTATGTGGGAAATCTCCCGGGTGATATTCGTGAAAAAGAAGTGGAGGATTTATTTTACAAGTATGGACGCATAGCTCACATTGATCTCAAGGTTCCACCAAGACCTCCTGGTTATGCATTTGTTGAGTTCGAAGATGCAGAAGATGCTCAAGATGCTATTCGTGGTCGTGATGGCTATGATTTTGATGGGCACAGGTTACGTGTGGAACTTGCTCATGGTGGTCGTGGTCATTCTTCATCTAGTGATCGTTATAGTAGTCATGGAGGAAGCCGTGGTGGGCGTGGAGTATCTAGGCGCTCTGATTATCGTGTATTAGTCACAGGATTACCTTCTTCCGCCTCATGGCAAGATTTAAAGGATCACATGCGGCGAGCTGGGGATGTTTGTTTCTCCCAAGTGTTTCGTGATGGTAGTGGAACTACAGGGATCGTGGACTACACTAACTATGATGACATGAAATATGCAATTAAAAAACTTGATGATTCTGAGTTCCGAAATGCATTTTCTCGGTCATATGTTCGTGTGAGAGAATATGATTCAAAGAGGGATCTCTCCAGGAGCCCTAGTCGTGGGCGGTCACACTCTAGAGGGAGGAGTTATAGTCGCAGTCGTAGTAGAGGCCGTAGTAGGAGCAAGAGCCGCAGTAGGAGCAAGTCTCCAAAAGCCAAATCTTCCCAGCGGTCACCTGTTAAATCCCGATCGAGGTCTGCTTCCCCTGCTCGCTCCCGGTCAAAGTCATCATCTCTTTCAGGATGGGCAGCTTTGAAAACCTTCTGGTACCTCTGTTCTAATGCTTTTAGCAATGCAATGTCCATGGGTGCTAGATTGGGATCAAAGGAGATCATGGATTGCAAAAATAGAGCTGGATATCTTGAACTAAGT

Protein sequence

MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVKSRSRSASPARSRSKSSSLSGWAALKTFWYLCSNAFSNAMSMGARLGSKEIMDCKNRAGYLELS

Homology

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BLAST of MC09g0604 vs. ExPASy Swiss-Prot
Match: O22315 (Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR34 PE=1 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 4.1e-98
Identity = 203/275 (73.82%), Postives = 226/275 (82.18%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+D
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGG---------RGVSRRSDY 120
           AI GRDGYDFDGHRLRVELAHGGR  SS   R S +GG RGG         RG SRRS++
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 121 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDS 180
           RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 180

Query: 181 EFRNAFSRSYVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKA 240
           EFRNAFS  YVRVREYDS++D SRSPSRGRS+S+ RS SR RS  RSRS+SRSRS+SPKA
Sbjct: 181 EFRNAFSNGYVRVREYDSRKD-SRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKA 240

Query: 241 KSSQRSPVK---------SRSRSASPARSRSKSSS 258
           KSS+RSP K         S+SRS SP RSRS+S S
Sbjct: 241 KSSRRSPAKSTSRSPGPRSKSRSPSPRRSRSRSRS 273

[Close]

BLAST of MC09g0604 vs. ExPASy Swiss-Prot
Match: F4JHI7 (Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana OX=3702 GN=SR34B PE=2 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 5.5e-95
Identity = 202/279 (72.40%), Postives = 226/279 (81.00%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSR+SRT+YVGNLPGDIRE+EVEDLF KYG +  IDLK+PPRPPGYAFVEFEDA DA D
Sbjct: 1   MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHS-SSSDRYSSHG-GSRGG-------RGVSRRSDY 120
           AI GRDGYDFDGH LRVELAHGGR  S  +   YS  G G RGG       RG SRRS+Y
Sbjct: 61  AIYGRDGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEY 120

Query: 121 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDS 180
           RV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRDG GTTGIVDYT+Y+DMKYA   LDD+
Sbjct: 121 RVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LDDT 180

Query: 181 EFRNAFSRSYVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKA 240
           EFRNAFS  YVRVREYDS+RD SRSPSRGRS+S+ RS  RS SR RSRS+SRS+S+SPKA
Sbjct: 181 EFRNAFSHEYVRVREYDSRRD-SRSPSRGRSYSKSRSRGRSPSRSRSRSRSRSKSRSPKA 240

Query: 241 KSSQRSPVKSRSRSASPARSRSKSSSLS--GWAALKTFW 269
           KS +RSP KS SRS   +RSRSKS SLS  GW  ++  W
Sbjct: 241 KSLRRSPAKSTSRSPR-SRSRSKSRSLSPRGWVTVERHW 274

[Close]

BLAST of MC09g0604 vs. ExPASy Swiss-Prot
Match: A2RVS6 (Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana OX=3702 GN=SR34A PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 3.7e-83
Identity = 174/269 (64.68%), Postives = 208/269 (77.32%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MS R SR++YVGNLPGDIRE E+ED+FYKYGRI  I+LKVPPRPP Y FVEFE + DA+D
Sbjct: 1   MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDR------YSSHGGSRGGR-----GVSRRS 120
           AI+GRDGY+ DG RLRVELAHGGRG SSS  R       S +GG  GG      GVSR S
Sbjct: 61  AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120

Query: 121 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLD 180
           ++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD  GT G+VDYTNYDDMKYAI+KLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180

Query: 181 DSEFRNAFSRSYVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSP 240
           D+EFRN ++R ++RV++Y+S R  SRSPSR RS SR RS SR R R  SRS+S SRSKSP
Sbjct: 181 DTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSP 240

Query: 241 K---AKSSQRSPVKSRSRSASPARSRSKS 256
           +   +KS +RS  +S S+S SP+  + KS
Sbjct: 241 RKDLSKSPRRSLSRSISKSRSPSPDKKKS 269

[Close]

BLAST of MC09g0604 vs. ExPASy Swiss-Prot
Match: Q9XFR5 (Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana OX=3702 GN=SR30 PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.7e-80
Identity = 179/260 (68.85%), Postives = 200/260 (76.92%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSR +RT+YVGNLPGDIR+ EVEDLFYKYG I  IDLK+PPRPPGYAFVEFED  DA D
Sbjct: 1   MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120
           AI GRDGYDFDG RLRVE+AHGGR  S S DRYSS       R  SRRSDYRVLVTGLP 
Sbjct: 61  AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSS--SYSASRAPSRRSDYRVLVTGLPP 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180
           SASWQDLKDHMR+AGDVCFS+VF D  G +G+VDY+NYDDMKYAI+KLD +EFRNAFS +
Sbjct: 121 SASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSA 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRS-KSRSRSKSPKAKSSQRSPV 240
           Y+RVREY+S R +SRSP   +S+      SRSRSRG S S  S+SRS SP    S RS  
Sbjct: 181 YIRVREYES-RSVSRSPDDSKSYR-----SRSRSRGPSCSYSSKSRSVSPARSISPRSRP 240

Query: 241 KSRSRSASPARSRSKSSSLS 260
            SRSRS   + SRS+S S S
Sbjct: 241 LSRSRSLYSSVSRSQSRSKS 252

[Close]

BLAST of MC09g0604 vs. ExPASy Swiss-Prot
Match: Q6NYA0 (Serine/arginine-rich splicing factor 1B OS=Danio rerio OX=7955 GN=srsf1b PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.1e-54
Identity = 135/239 (56.49%), Postives = 162/239 (67.78%), Query Frame = 0


Query: 9   VYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGY 68
           +YVGNLP DIR K+VED+FYKYG I  IDLK     P +AFVEFED  DA+DA+ GRDGY
Sbjct: 17  IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76

Query: 69  DFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRG-VSRRSDYRVLVTGLPSSASWQDL 128
           D+DG+RLRVE    GRG           G  RG  G  SRRS+YRV+V+GLP S SWQDL
Sbjct: 77  DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 136

Query: 129 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFR-NAFSRSYVRVRE 188
           KDHMR AGDVC++ VFRDG   TG+V++   +DM YA++KLD+++FR +    +Y+RV  
Sbjct: 137 KDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV-- 196

Query: 189 YDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVKSRSRS 246
              K D  RSPS GRS SR RS SRSRS  RSRS S  RS+     S + SP  SRSRS
Sbjct: 197 ---KVDGPRSPSYGRSRSRSRSRSRSRSNSRSRSYSPRRSRG----SPRYSPRHSRSRS 243

[Close]

BLAST of MC09g0604 vs. NCBI nr
Match: KAA0067995.1 (serine/arginine-rich-splicing factor SR34-like isoform X1 [Cucumis melo var. makuwa] >TYK18132.1 serine/arginine-rich-splicing factor SR34-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 562 bits (1448), Expect = 7.87e-200
Identity = 297/303 (98.02%), Postives = 300/303 (99.01%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRS+SRGRSYSRSRSRGRSRSKS SRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSHSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSGWAALKTFWYLCSNAFSNAMSMGARLGSKEIMDCKNRAGYL 300
           SRSRSASPARSRSKSSSLSGWAA KTFWYLCSNAFSNAMSMGARLGSKEIMDC NRAGYL
Sbjct: 241 SRSRSASPARSRSKSSSLSGWAAFKTFWYLCSNAFSNAMSMGARLGSKEIMDCNNRAGYL 300

Query: 301 ELS 303
           EL+
Sbjct: 301 ELN 303

[Close]

BLAST of MC09g0604 vs. NCBI nr
Match: KAG7014363.1 (Serine/arginine-rich-splicing factor SR34, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 551 bits (1421), Expect = 9.85e-197
Identity = 293/303 (96.70%), Postives = 297/303 (98.02%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHG SRGGRGVSRRSD+RVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSRGGRGVSRRSDFRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRD S+SPSRGRS+SRGRSYSRSRSRGRSRSKSRSRSKSPK KSSQRSPVK
Sbjct: 181 YVRVREYDSKRDSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSGWAALKTFWYLCSNAFSNAMSMGARLGSKEIMDCKNRAGYL 300
           SRSRSASPARSRSKSSSLSGWAALKTFWYL SNAFSNAMSMGAR GSK+IMDC NRAGYL
Sbjct: 241 SRSRSASPARSRSKSSSLSGWAALKTFWYLYSNAFSNAMSMGARFGSKKIMDCNNRAGYL 300

Query: 301 ELS 303
           ELS
Sbjct: 301 ELS 303

[Close]

BLAST of MC09g0604 vs. NCBI nr
Match: XP_022148221.1 (serine/arginine-rich-splicing factor SR34-like isoform X3 [Momordica charantia])

HSP 1 Score: 484 bits (1245), Expect = 1.65e-170
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSG 260
           SRSRSASPARSRSKSSSLSG
Sbjct: 241 SRSRSASPARSRSKSSSLSG 260

[Close]

BLAST of MC09g0604 vs. NCBI nr
Match: XP_022148198.1 (serine/arginine-rich-splicing factor SR34-like isoform X1 [Momordica charantia])

HSP 1 Score: 484 bits (1245), Expect = 3.54e-170
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSG 260
           SRSRSASPARSRSKSSSLSG
Sbjct: 241 SRSRSASPARSRSKSSSLSG 260

[Close]

BLAST of MC09g0604 vs. NCBI nr
Match: XP_016901087.1 (PREDICTED: serine/arginine-rich-splicing factor SR34-like isoform X4 [Cucumis melo] >XP_016901088.1 PREDICTED: serine/arginine-rich-splicing factor SR34-like isoform X4 [Cucumis melo])

HSP 1 Score: 478 bits (1231), Expect = 1.50e-168
Identity = 257/260 (98.85%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRS+SRGRSYSRSRSRGRSRSKS SRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSHSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSG 260
           SRSRSASPARSRSKSSSLSG
Sbjct: 241 SRSRSASPARSRSKSSSLSG 260

[Close]

BLAST of MC09g0604 vs. ExPASy TrEMBL
Match: A0A5D3D2K1 (Serine/arginine-rich-splicing factor SR34-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00620 PE=4 SV=1)

HSP 1 Score: 562 bits (1448), Expect = 3.81e-200
Identity = 297/303 (98.02%), Postives = 300/303 (99.01%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRS+SRGRSYSRSRSRGRSRSKS SRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSHSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSGWAALKTFWYLCSNAFSNAMSMGARLGSKEIMDCKNRAGYL 300
           SRSRSASPARSRSKSSSLSGWAA KTFWYLCSNAFSNAMSMGARLGSKEIMDC NRAGYL
Sbjct: 241 SRSRSASPARSRSKSSSLSGWAAFKTFWYLCSNAFSNAMSMGARLGSKEIMDCNNRAGYL 300

Query: 301 ELS 303
           EL+
Sbjct: 301 ELN 303

[Close]

BLAST of MC09g0604 vs. ExPASy TrEMBL
Match: A0A6J1D4Q8 (serine/arginine-rich-splicing factor SR34-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111016926 PE=4 SV=1)

HSP 1 Score: 484 bits (1245), Expect = 7.99e-171
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSG 260
           SRSRSASPARSRSKSSSLSG
Sbjct: 241 SRSRSASPARSRSKSSSLSG 260

[Close]

BLAST of MC09g0604 vs. ExPASy TrEMBL
Match: A0A6J1D3F5 (serine/arginine-rich-splicing factor SR34-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016926 PE=4 SV=1)

HSP 1 Score: 484 bits (1245), Expect = 1.71e-170
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSG 260
           SRSRSASPARSRSKSSSLSG
Sbjct: 241 SRSRSASPARSRSKSSSLSG 260

[Close]

BLAST of MC09g0604 vs. ExPASy TrEMBL
Match: A0A1S4DYP1 (serine/arginine-rich-splicing factor SR34-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103492811 PE=4 SV=1)

HSP 1 Score: 478 bits (1231), Expect = 7.27e-169
Identity = 257/260 (98.85%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRS+SRGRSYSRSRSRGRSRSKS SRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSHSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSG 260
           SRSRSASPARSRSKSSSLSG
Sbjct: 241 SRSRSASPARSRSKSSSLSG 260

[Close]

BLAST of MC09g0604 vs. ExPASy TrEMBL
Match: A0A1S4DYM7 (serine/arginine-rich-splicing factor SR34-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492811 PE=4 SV=1)

HSP 1 Score: 478 bits (1231), Expect = 1.05e-168
Identity = 257/260 (98.85%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
Sbjct: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120
           AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS
Sbjct: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS 180
           SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180

Query: 181 YVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKAKSSQRSPVK 240
           YVRVREYDSKRDLSRSPSRGRS+SRGRSYSRSRSRGRSRSKS SRSKSPKAKSSQRSPVK
Sbjct: 181 YVRVREYDSKRDLSRSPSRGRSYSRGRSYSRSRSRGRSRSKSHSRSKSPKAKSSQRSPVK 240

Query: 241 SRSRSASPARSRSKSSSLSG 260
           SRSRSASPARSRSKSSSLSG
Sbjct: 241 SRSRSASPARSRSKSSSLSG 260

[Close]

BLAST of MC09g0604 vs. TAIR 10
Match: AT1G02840.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 364.8 bits (935), Expect = 6.8e-101
Identity = 206/285 (72.28%), Postives = 232/285 (81.40%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+D
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGG---------RGVSRRSDY 120
           AI GRDGYDFDGHRLRVELAHGGR  SS   R S +GG RGG         RG SRRS++
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 121 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDS 180
           RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 180

Query: 181 EFRNAFSRSYVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKA 240
           EFRNAFS  YVRVREYDS++D SRSPSRGRS+S+ RS SR RS  RSRS+SRSRS+SPKA
Sbjct: 181 EFRNAFSNGYVRVREYDSRKD-SRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKA 240

Query: 241 KSSQRSPVKSRSRSASPARSRSKSSSLSGWAALKTFWYLCSNAFS 277
           KSS+RSP KS SRS  P RS+S+S S   W  ++T  +L  N  S
Sbjct: 241 KSSRRSPAKSTSRSPGP-RSKSRSPSPRRWITVETLDHLDHNIIS 282

[Close]

BLAST of MC09g0604 vs. TAIR 10
Match: AT1G02840.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 359.4 bits (921), Expect = 2.9e-99
Identity = 203/275 (73.82%), Postives = 226/275 (82.18%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+D
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGG---------RGVSRRSDY 120
           AI GRDGYDFDGHRLRVELAHGGR  SS   R S +GG RGG         RG SRRS++
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 121 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDS 180
           RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 180

Query: 181 EFRNAFSRSYVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKA 240
           EFRNAFS  YVRVREYDS++D SRSPSRGRS+S+ RS SR RS  RSRS+SRSRS+SPKA
Sbjct: 181 EFRNAFSNGYVRVREYDSRKD-SRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKA 240

Query: 241 KSSQRSPVK---------SRSRSASPARSRSKSSS 258
           KSS+RSP K         S+SRS SP RSRS+S S
Sbjct: 241 KSSRRSPAKSTSRSPGPRSKSRSPSPRRSRSRSRS 273

[Close]

BLAST of MC09g0604 vs. TAIR 10
Match: AT1G02840.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 359.4 bits (921), Expect = 2.9e-99
Identity = 203/275 (73.82%), Postives = 226/275 (82.18%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+D
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGGSRGG---------RGVSRRSDY 120
           AI GRDGYDFDGHRLRVELAHGGR  SS   R S +GG RGG         RG SRRS++
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 120

Query: 121 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDS 180
           RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+
Sbjct: 121 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 180

Query: 181 EFRNAFSRSYVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKA 240
           EFRNAFS  YVRVREYDS++D SRSPSRGRS+S+ RS SR RS  RSRS+SRSRS+SPKA
Sbjct: 181 EFRNAFSNGYVRVREYDSRKD-SRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKA 240

Query: 241 KSSQRSPVK---------SRSRSASPARSRSKSSS 258
           KSS+RSP K         S+SRS SP RSRS+S S
Sbjct: 241 KSSRRSPAKSTSRSPGPRSKSRSPSPRRSRSRSRS 273

[Close]

BLAST of MC09g0604 vs. TAIR 10
Match: AT4G02430.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 349.0 bits (894), Expect = 3.9e-96
Identity = 202/279 (72.40%), Postives = 226/279 (81.00%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MSSR+SRT+YVGNLPGDIRE+EVEDLF KYG +  IDLK+PPRPPGYAFVEFEDA DA D
Sbjct: 1   MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHS-SSSDRYSSHG-GSRGG-------RGVSRRSDY 120
           AI GRDGYDFDGH LRVELAHGGR  S  +   YS  G G RGG       RG SRRS+Y
Sbjct: 61  AIYGRDGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEY 120

Query: 121 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDS 180
           RV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRDG GTTGIVDYT+Y+DMKYA   LDD+
Sbjct: 121 RVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LDDT 180

Query: 181 EFRNAFSRSYVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSPKA 240
           EFRNAFS  YVRVREYDS+RD SRSPSRGRS+S+ RS  RS SR RSRS+SRS+S+SPKA
Sbjct: 181 EFRNAFSHEYVRVREYDSRRD-SRSPSRGRSYSKSRSRGRSPSRSRSRSRSRSKSRSPKA 240

Query: 241 KSSQRSPVKSRSRSASPARSRSKSSSLS--GWAALKTFW 269
           KS +RSP KS SRS   +RSRSKS SLS  GW  ++  W
Sbjct: 241 KSLRRSPAKSTSRSPR-SRSRSKSRSLSPRGWVTVERHW 274

[Close]

BLAST of MC09g0604 vs. TAIR 10
Match: AT3G49430.1 (SER/ARG-rich protein 34A )

HSP 1 Score: 309.7 bits (792), Expect = 2.6e-84
Identity = 174/269 (64.68%), Postives = 208/269 (77.32%), Query Frame = 0


Query: 1   MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
           MS R SR++YVGNLPGDIRE E+ED+FYKYGRI  I+LKVPPRPP Y FVEFE + DA+D
Sbjct: 1   MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60

Query: 61  AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDR------YSSHGGSRGGR-----GVSRRS 120
           AI+GRDGY+ DG RLRVELAHGGRG SSS  R       S +GG  GG      GVSR S
Sbjct: 61  AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120

Query: 121 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLD 180
           ++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD  GT G+VDYTNYDDMKYAI+KLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180

Query: 181 DSEFRNAFSRSYVRVREYDSKRDLSRSPSRGRSHSRGRSYSRSRSRGRSRSKSRSRSKSP 240
           D+EFRN ++R ++RV++Y+S R  SRSPSR RS SR RS SR R R  SRS+S SRSKSP
Sbjct: 181 DTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSP 240

Query: 241 K---AKSSQRSPVKSRSRSASPARSRSKS 256
           +   +KS +RS  +S S+S SP+  + KS
Sbjct: 241 RKDLSKSPRRSLSRSISKSRSPSPDKKKS 269

The following BLAST results are available for this feature:

BLAST of MC09g0604 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22315	4.1e-98	73.82	Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR3...	[more]
F4JHI7	5.5e-95	72.40	Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana OX=3702 GN=SR...	[more]
A2RVS6	3.7e-83	64.68	Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana OX=3702 GN=SR...	[more]
Q9XFR5	1.7e-80	68.85	Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana OX=3702 GN=SR3...	[more]
Q6NYA0	2.1e-54	56.49	Serine/arginine-rich splicing factor 1B OS=Danio rerio OX=7955 GN=srsf1b PE=2 SV...	[more]

BLAST of MC09g0604 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067995.1	7.87e-200	98.02	serine/arginine-rich-splicing factor SR34-like isoform X1 [Cucumis melo var. mak...	[more]
KAG7014363.1	9.85e-197	96.70	Serine/arginine-rich-splicing factor SR34, partial [Cucurbita argyrosperma subsp...	[more]
XP_022148221.1	1.65e-170	100.00	serine/arginine-rich-splicing factor SR34-like isoform X3 [Momordica charantia]	[more]
XP_022148198.1	3.54e-170	100.00	serine/arginine-rich-splicing factor SR34-like isoform X1 [Momordica charantia]	[more]
XP_016901087.1	1.50e-168	98.85	PREDICTED: serine/arginine-rich-splicing factor SR34-like isoform X4 [Cucumis me...	[more]

BLAST of MC09g0604 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D2K1	3.81e-200	98.02	Serine/arginine-rich-splicing factor SR34-like isoform X1 OS=Cucumis melo var. m...	[more]
A0A6J1D4Q8	7.99e-171	100.00	serine/arginine-rich-splicing factor SR34-like isoform X3 OS=Momordica charantia...	[more]
A0A6J1D3F5	1.71e-170	100.00	serine/arginine-rich-splicing factor SR34-like isoform X1 OS=Momordica charantia...	[more]
A0A1S4DYP1	7.27e-169	98.85	serine/arginine-rich-splicing factor SR34-like isoform X4 OS=Cucumis melo OX=365...	[more]
A0A1S4DYM7	1.05e-168	98.85	serine/arginine-rich-splicing factor SR34-like isoform X3 OS=Cucumis melo OX=365...	[more]

BLAST of MC09g0604 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02840.2	6.8e-101	72.28	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G02840.1	2.9e-99	73.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G02840.3	2.9e-99	73.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G02430.2	3.9e-96	72.40	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G49430.1	2.6e-84	64.68	SER/ARG-rich protein 34A	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 8..78 e-value: 2.3E-23 score: 93.6 coord: 112..183 e-value: 1.2E-6 score: 38.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 9..76 e-value: 3.5E-18 score: 65.2 coord: 113..175 e-value: 1.8E-10 score: 40.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 111..189 score: 9.763249
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 7..82 score: 18.80261
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..110 e-value: 3.0E-28 score: 100.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 111..188 e-value: 7.7E-23 score: 82.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..254
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 2..260
None	No IPR available	PANTHER	PTHR23147:SF198	PRE-MRNA-SPLICING FACTOR SF2-LIKE PROTEIN	coord: 2..260
None	No IPR available	CDD	cd12599	RRM1_SF2_plant_like	coord: 8..79 e-value: 9.5885E-48 score: 152.614
None	No IPR available	CDD	cd12602	RRM2_SF2_plant_like	coord: 111..186 e-value: 3.37974E-49 score: 156.513
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 6..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g0604.1	MC09g0604.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding