MC09g0601 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0601
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	60S ribosomal protein L22-2
Location	MC09: 5516360 .. 5518139 (-)
RNA-Seq Expression	MC09g0601
Synteny	MC09g0601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAAAGAGTGGTCAGATCCCAAAATGAGGCTAATTTTACAAAATTGAATTAAAATGGGCCATTTTTGTTGTTTAAGAAGAAAAAAAGCACCATCTTCTTCGTGCCTTAAAATACCACTCAAAACCCTAACTCCAGCGCCGTTGTTCGATATCTCTCTCTGCAGAAGTTTAGGTCAAGAAATTGCTGCCCGAGAAGCGAAAATGAGCCGTGGAGCAGCAGCATCCGGTGGCCCAAAGGGGAAGAAGAAGGGCGTGACCTTCGTTATTGATTGTGCGAAGCCTGTGGAGGACAAGATCATGGACATCGCCTCATTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTTGGCGGCAAAGCTGGGGCACTCGGTGACTCGGTTACCGTCACTCGGGACAAGAACAAGATCACGGTCAACTCCGATAGCAACTTCTCCAAGAGGTATTTTGTTGTTTTTATGGTTGTTAATTCGTGCGCTATTCTGAATTGTGATTATGAATCTGTTTCTCGGCGAGTTCTGTTCGTGCATTCATTGATTTGTTTGGGAATAAGCTTTGGGTTGCTCTGCTACCCGCCACGGTATTACTGAGAATAAAAACGCTGTGTGCGTTTATAATCGTAGTTTTATTGCATATTTTACTGGATTGTGAGATTGATGAACATCAAAGGGCTATATTGCAGGAATTGGTCTTGATACTTCAGCCATGATTTAGTGTAAACGGGAAAGTGACTGACTTCTTCAAGAAGTACTCGTTATCTCATATAATAATTTTTCAGCTTCGTGCTATAGATTCTGAATTTGTAATTTTGTGTATTCTGGGTCATTTTTATTTGCTCATTTGTAAAGTTCTTACAGTTGTAGTCTTTTGGTATAATTTTTCTTCTTGTACCGTCGGGTGGATTAACTCTAGGCCTTTATTTCTGGACAACCCAATAAAAGAGGGACTTGTCGAAGATTTTACTTGTCTGCCTATGCATTTTCTAATTAGCCACCTCTTCTAGTTGTGACACGCAAATAGCAAGTCTCCTTTTTTGCCCCTTCCCTTTTATGGGTGAACTTAGAACTTTACTGCATGCATAATTTTTGCAAAGAACAAGGTTGATTGTTACACTTGAATACTGGTTATTCTCTTGGGAAAATAGGCTTCTAATCCCTGAATAAACTTTGCTGATTGTTACCTCTTTTGAATCCCAGGTATCTTAAATACTTGACTAAGAAGTACTTGAAGAAACACAATGTCAGAGATTGGCTTCGGGTAATTGCTTCGAACAAAGATCGCAATGTCTATGAATTGAGATACTTTAACATTGCTGAGAACGAGGGCGAGGAAGAGGATTGAGGTTGAAGCATCGTTTCAGTAGGATTAGTTGTAGTGGCGGGCGTTCTCATATTAAGGTTGTTGAAATTATATTTCCATACCTTGTCTTGAAGCTTTCATATAGATCTGTAAGGATTATTTGAGTTATGAGATGATGGAACTCTTGTTTCTTTCTGAAGTTTCAATATCTATAGATTTTGTTCACTTATAGCTCCCTTGTGTTGGTTGGTTTGAAGATGTTTTTTCTTGCTCGGAGTATACTGTTCTTGTCTTGCAAAAATGATGTATGTGTACTTGGTTCATTAAAATTTGGCATATTATTCTAAGTAAGTTTTCAAGGGTTTGTTTGGTAATGTTCCATTGTTTTTTCCTACTTTTCAACAATCGTAACATTTGATAATTATTTATGTTTCTTGTTTTTTATTTTTTAGAAACATTTTTAAAATTATATAAAAAATTTAGAAA

mRNA sequence

GTAAAAGAGTGGTCAGATCCCAAAATGAGGCTAATTTTACAAAATTGAATTAAAATGGGCCATTTTTGTTGTTTAAGAAGAAAAAAAGCACCATCTTCTTCGTGCCTTAAAATACCACTCAAAACCCTAACTCCAGCGCCGTTGTTCGATATCTCTCTCTGCAGAAGTTTAGGTCAAGAAATTGCTGCCCGAGAAGCGAAAATGAGCCGTGGAGCAGCAGCATCCGGTGGCCCAAAGGGGAAGAAGAAGGGCGTGACCTTCGTTATTGATTGTGCGAAGCCTGTGGAGGACAAGATCATGGACATCGCCTCATTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTTGGCGGCAAAGCTGGGGCACTCGGTGACTCGGTTACCGTCACTCGGGACAAGAACAAGATCACGGTCAACTCCGATAGCAACTTCTCCAAGAGGTATCTTAAATACTTGACTAAGAAGTACTTGAAGAAACACAATGTCAGAGATTGGCTTCGGGTAATTGCTTCGAACAAAGATCGCAATGTCTATGAATTGAGATACTTTAACATTGCTGAGAACGAGGGCGAGGAAGAGGATTGAGGTTGAAGCATCGTTTCAGTAGGATTAGTTGTAGTGGCGGGCGTTCTCATATTAAGGTTGTTGAAATTATATTTCCATACCTTGTCTTGAAGCTTTCATATAGATCTGTAAGGATTATTTGAGTTATGAGATGATGGAACTCTTGTTTCTTTCTGAAGTTTCAATATCTATAGATTTTGTTCACTTATAGCTCCCTTGTGTTGGTTGGTTTGAAGATGTTTTTTCTTGCTCGGAGTATACTGTTCTTGTCTTGCAAAAATGATGTATGTGTACTTGGTTCATTAAAATTTGGCATATTATTCTAAGTAAGTTTTCAAGGGTTTGTTTGGTAATGTTCCATTGTTTTTTCCTACTTTTCAACAATCGTAACATTTGATAATTATTTATGTTTCTTGTTTTTTATTTTTTAGAAACATTTTTAAAATTATATAAAAAATTTAGAAA

Coding sequence (CDS)

ATGGGCCATTTTTGTTGTTTAAGAAGAAAAAAAGCACCATCTTCTTCGTGCCTTAAAATACCACTCAAAACCCTAACTCCAGCGCCGTTGTTCGATATCTCTCTCTGCAGAAGTTTAGGTCAAGAAATTGCTGCCCGAGAAGCGAAAATGAGCCGTGGAGCAGCAGCATCCGGTGGCCCAAAGGGGAAGAAGAAGGGCGTGACCTTCGTTATTGATTGTGCGAAGCCTGTGGAGGACAAGATCATGGACATCGCCTCATTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTTGGCGGCAAAGCTGGGGCACTCGGTGACTCGGTTACCGTCACTCGGGACAAGAACAAGATCACGGTCAACTCCGATAGCAACTTCTCCAAGAGGTATCTTAAATACTTGACTAAGAAGTACTTGAAGAAACACAATGTCAGAGATTGGCTTCGGGTAATTGCTTCGAACAAAGATCGCAATGTCTATGAATTGAGATACTTTAACATTGCTGAGAACGAGGGCGAGGAAGAGGATTGA

Protein sequence

MGHFCCLRRKKAPSSSCLKIPLKTLTPAPLFDISLCRSLGQEIAAREAKMSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED

Homology

[Close]

BLAST of MC09g0601 vs. ExPASy Swiss-Prot
Match: Q9M9W1 (60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.9e-52
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 170 EGEEED 176
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of MC09g0601 vs. ExPASy Swiss-Prot
Match: Q9FE58 (60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.1e-51
Identity = 104/126 (82.54%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV+
Sbjct: 1   MSRGNAAAA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVS 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 170 EGEEED 176
           E EEED
Sbjct: 121 EAEEED 124

[Close]

BLAST of MC09g0601 vs. ExPASy Swiss-Prot
Match: Q9SRX7 (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.6e-41
Identity = 87/126 (69.05%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV+
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           +TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASNKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 170 EGEEED 176
               E+
Sbjct: 121 VASYEE 126

[Close]

BLAST of MC09g0601 vs. ExPASy Swiss-Prot
Match: P47198 (60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 6.5e-32
Identity = 77/121 (63.64%), Postives = 93/121 (76.86%), Query Frame = 0


Query: 56  ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDK 115
           A GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K
Sbjct: 9   AKGGKK-KKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSK 68

Query: 116 NKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEE 175
           +KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+   YELRYF I ++E EEE
Sbjct: 69  SKITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEE 126

[Close]

BLAST of MC09g0601 vs. ExPASy Swiss-Prot
Match: P35268 (60S ribosomal protein L22 OS=Homo sapiens OX=9606 GN=RPL22 PE=1 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31
Identity = 75/118 (63.56%), Postives = 91/118 (77.12%), Query Frame = 0


Query: 59  GPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDKNKI 118
           G K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K+KI
Sbjct: 11  GGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKI 70

Query: 119 TVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 176
           TV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+   YELRYF I ++E EEED
Sbjct: 71  TVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126

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BLAST of MC09g0601 vs. NCBI nr
Match: XP_004136027.1 (60S ribosomal protein L22-2 [Cucumis sativus] >XP_008451565.1 PREDICTED: 60S ribosomal protein L22-2 [Cucumis melo] >XP_022155135.1 60S ribosomal protein L22-2 [Momordica charantia] >XP_038896853.1 60S ribosomal protein L22-2-like [Benincasa hispida] >KAA0067992.1 60S ribosomal protein L22-2-like [Cucumis melo var. makuwa] >KGN44943.1 hypothetical protein Csa_015937 [Cucumis sativus] >TYK18135.1 60S ribosomal protein L22-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 244 bits (622), Expect = 2.85e-80
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 170 EGEEED 175
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MC09g0601 vs. NCBI nr
Match: XP_023548993.1 (60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo] >KAG6575823.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243 bits (619), Expect = 8.17e-80
Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 170 EGEEED 175
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MC09g0601 vs. NCBI nr
Match: XP_022991268.1 (60S ribosomal protein L22-2-like [Cucurbita maxima])

HSP 1 Score: 241 bits (616), Expect = 2.34e-79
Identity = 124/126 (98.41%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYEL+YFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELKYFNIAEN 120

Query: 170 EGEEED 175
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MC09g0601 vs. NCBI nr
Match: XP_022960081.1 (60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_023004692.1 60S ribosomal protein L22-2-like [Cucurbita maxima] >KAG6593201.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241 bits (616), Expect = 2.34e-79
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRGAAASGGPKGKKKG TFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGSTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 170 EGEEED 175
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MC09g0601 vs. NCBI nr
Match: XP_022953729.1 (60S ribosomal protein L22-2-like [Cucurbita moschata])

HSP 1 Score: 239 bits (610), Expect = 1.92e-78
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRGAAASG PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 170 EGEEED 175
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MC09g0601 vs. ExPASy TrEMBL
Match: A0A5D3D2W6 (60S ribosomal protein L22-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00650 PE=3 SV=1)

HSP 1 Score: 244 bits (622), Expect = 1.38e-80
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 170 EGEEED 175
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MC09g0601 vs. ExPASy TrEMBL
Match: A0A0A0K637 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397560 PE=3 SV=1)

HSP 1 Score: 244 bits (622), Expect = 1.38e-80
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 170 EGEEED 175
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MC09g0601 vs. ExPASy TrEMBL
Match: A0A6J1DLK6 (60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111022271 PE=3 SV=1)

HSP 1 Score: 244 bits (622), Expect = 1.38e-80
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 170 EGEEED 175
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MC09g0601 vs. ExPASy TrEMBL
Match: A0A1S3BRQ9 (60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492808 PE=3 SV=1)

HSP 1 Score: 244 bits (622), Expect = 1.38e-80
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 170 EGEEED 175
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MC09g0601 vs. ExPASy TrEMBL
Match: A0A6J1JVR1 (60S ribosomal protein L22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111487969 PE=3 SV=1)

HSP 1 Score: 241 bits (616), Expect = 1.13e-79
Identity = 124/126 (98.41%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYEL+YFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELKYFNIAEN 120

Query: 170 EGEEED 175
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of MC09g0601 vs. TAIR 10
Match: AT3G05560.1 (Ribosomal L22e protein family )

HSP 1 Score: 206.8 bits (525), Expect = 1.4e-53
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 170 EGEEED 176
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of MC09g0601 vs. TAIR 10
Match: AT3G05560.2 (Ribosomal L22e protein family )

HSP 1 Score: 206.8 bits (525), Expect = 1.4e-53
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 170 EGEEED 176
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of MC09g0601 vs. TAIR 10
Match: AT3G05560.3 (Ribosomal L22e protein family )

HSP 1 Score: 206.8 bits (525), Expect = 1.4e-53
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 170 EGEEED 176
           EGEEED
Sbjct: 121 EGEEED 124

[Close]

BLAST of MC09g0601 vs. TAIR 10
Match: AT5G27770.1 (Ribosomal L22e protein family )

HSP 1 Score: 203.4 bits (516), Expect = 1.5e-52
Identity = 104/126 (82.54%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV+
Sbjct: 1   MSRGNAAAA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVS 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 170 EGEEED 176
           E EEED
Sbjct: 121 EAEEED 124

[Close]

BLAST of MC09g0601 vs. TAIR 10
Match: AT1G02830.1 (Ribosomal L22e protein family )

HSP 1 Score: 169.9 bits (429), Expect = 1.9e-42
Identity = 87/126 (69.05%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 50  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 109
           M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV+
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 110 VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 169
           +TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASNKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 170 EGEEED 176
               E+
Sbjct: 121 VASYEE 126

The following BLAST results are available for this feature:

BLAST of MC09g0601 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9W1	1.9e-52	84.13	60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1	[more]
Q9FE58	2.1e-51	82.54	60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1	[more]
Q9SRX7	2.6e-41	69.05	Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A P...	[more]
P47198	6.5e-32	63.64	60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2	[more]
P35268	1.1e-31	63.56	60S ribosomal protein L22 OS=Homo sapiens OX=9606 GN=RPL22 PE=1 SV=2	[more]

BLAST of MC09g0601 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136027.1	2.85e-80	100.00	60S ribosomal protein L22-2 [Cucumis sativus] >XP_008451565.1 PREDICTED: 60S rib...	[more]
XP_023548993.1	8.17e-80	99.21	60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo] >KAG6575823.1 60S ...	[more]
XP_022991268.1	2.34e-79	98.41	60S ribosomal protein L22-2-like [Cucurbita maxima]	[more]
XP_022960081.1	2.34e-79	99.21	60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_023004692.1 60S riboso...	[more]
XP_022953729.1	1.92e-78	98.41	60S ribosomal protein L22-2-like [Cucurbita moschata]	[more]

BLAST of MC09g0601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D2W6	1.38e-80	100.00	60S ribosomal protein L22-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A0A0K637	1.38e-80	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397560 PE=3 SV=1	[more]
A0A6J1DLK6	1.38e-80	100.00	60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111022271 PE=3 ...	[more]
A0A1S3BRQ9	1.38e-80	100.00	60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492808 PE=3 SV=1	[more]
A0A6J1JVR1	1.13e-79	98.41	60S ribosomal protein L22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111487969 PE=...	[more]

BLAST of MC09g0601 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05560.1	1.4e-53	84.13	Ribosomal L22e protein family	[more]
AT3G05560.2	1.4e-53	84.13	Ribosomal L22e protein family	[more]
AT3G05560.3	1.4e-53	84.13	Ribosomal L22e protein family	[more]
AT5G27770.1	1.5e-52	82.54	Ribosomal L22e protein family	[more]
AT1G02830.1	1.9e-42	69.05	Ribosomal L22e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002671	Ribosomal protein L22e	PFAM	PF01776	Ribosomal_L22e	coord: 65..173 e-value: 8.8E-46 score: 154.8
IPR002671	Ribosomal protein L22e	PANTHER	PTHR10064	60S RIBOSOMAL PROTEIN L22	coord: 45..175
IPR038526	Ribosomal protein L22e superfamily	GENE3D	3.30.1360.210		coord: 56..175 e-value: 1.7E-56 score: 191.3
None	No IPR available	PANTHER	PTHR10064:SF13	SUBFAMILY NOT NAMED	coord: 45..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g0601.1	MC09g0601.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome