MC09g0589 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g0589
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic
LocationMC09: 5417328 .. 5417867 (+)
RNA-Seq ExpressionMC09g0589
SyntenyMC09g0589
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGAGAGGCTTTAAGCACCATCCTCAAAGAAATCCAAACTACAGATTCCAGGCGCTCCAGTGTAGCTCATCCTTATTGGGTTCTACTGTTACCTCTTCCAAGGTTGCTCTGTTATTAGCCTCTGCCACCCCTCCATTAAAGCCAGCTGCTGCATTTGAAGGTACAAGAACTACCCCCTTTGCCCTGCAAGATGCATCAATGGCTGCCTCTGATTTCACGAAAAACATGGCCCTGGCCGACCTCGACCCAGCAACGGCAAAGCTCGCAATCGGCTTTCTGGGTCCGTTTCTCTCGGCATTTTCGTTTTTGTTTATTGTGAGAATAGTGATGTCTTGGTATCCAAAGTTACCTGTGGGGAAGTTTCCATATGTTGTAGCTTATGCTCCAACTGAACCACTTCTAATTGTGACAAGGAAGGTGATTCCCCCTCTTGGCGGAGTTGACGTAACGCCTGTTGTCTGGTTCGGATTGGTTAGTTTCCTCAACGAGATATTGCTCGGTCCCCAAGGACTGCTTGTTCTTCTTTCTCAACAGGTCAGC

mRNA sequence

CAGAGAGGCTTTAAGCACCATCCTCAAAGAAATCCAAACTACAGATTCCAGGCGCTCCAGTGTAGCTCATCCTTATTGGGTTCTACTGTTACCTCTTCCAAGGTTGCTCTGTTATTAGCCTCTGCCACCCCTCCATTAAAGCCAGCTGCTGCATTTGAAGGTACAAGAACTACCCCCTTTGCCCTGCAAGATGCATCAATGGCTGCCTCTGATTTCACGAAAAACATGGCCCTGGCCGACCTCGACCCAGCAACGGCAAAGCTCGCAATCGGCTTTCTGGGTCCGTTTCTCTCGGCATTTTCGTTTTTGTTTATTGTGAGAATAGTGATGTCTTGGTATCCAAAGTTACCTGTGGGGAAGTTTCCATATGTTGTAGCTTATGCTCCAACTGAACCACTTCTAATTGTGACAAGGAAGGTGATTCCCCCTCTTGGCGGAGTTGACGTAACGCCTGTTGTCTGGTTCGGATTGGTTAGTTTCCTCAACGAGATATTGCTCGGTCCCCAAGGACTGCTTGTTCTTCTTTCTCAACAGGTCAGC

Coding sequence (CDS)

CAGAGAGGCTTTAAGCACCATCCTCAAAGAAATCCAAACTACAGATTCCAGGCGCTCCAGTGTAGCTCATCCTTATTGGGTTCTACTGTTACCTCTTCCAAGGTTGCTCTGTTATTAGCCTCTGCCACCCCTCCATTAAAGCCAGCTGCTGCATTTGAAGGTACAAGAACTACCCCCTTTGCCCTGCAAGATGCATCAATGGCTGCCTCTGATTTCACGAAAAACATGGCCCTGGCCGACCTCGACCCAGCAACGGCAAAGCTCGCAATCGGCTTTCTGGGTCCGTTTCTCTCGGCATTTTCGTTTTTGTTTATTGTGAGAATAGTGATGTCTTGGTATCCAAAGTTACCTGTGGGGAAGTTTCCATATGTTGTAGCTTATGCTCCAACTGAACCACTTCTAATTGTGACAAGGAAGGTGATTCCCCCTCTTGGCGGAGTTGACGTAACGCCTGTTGTCTGGTTCGGATTGGTTAGTTTCCTCAACGAGATATTGCTCGGTCCCCAAGGACTGCTTGTTCTTCTTTCTCAACAGGTCAGC

Protein sequence

QRGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Homology
[Close]
BLAST of MC09g0589 vs. ExPASy Swiss-Prot
Match: Q8RWM7 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCB3 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.8e-44
Identity = 94/126 (74.60%), Postives = 106/126 (84.13%), Query Frame = 0 

Query: 53  EGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSW 112
           E   TT    Q  S+  S+  +N++LADLDP TAKLAIG LGP LSAF FLFI+RIVMSW
Sbjct: 48  EAATTTNLIRQTNSI--SESLRNISLADLDPGTAKLAIGILGPALSAFGFLFILRIVMSW 107

Query: 113 YPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLL 172
           YPKLPV KFPYV+AYAPTEP+L+ TRKVIPPL GVDVTPVVWFGLVSFL+EIL+GPQGLL
Sbjct: 108 YPKLPVDKFPYVLAYAPTEPILVQTRKVIPPLAGVDVTPVVWFGLVSFLSEILVGPQGLL 167

Query: 173 VLLSQQ 179
           VL+SQQ
Sbjct: 168 VLVSQQ 171

[Close]
BLAST of MC09g0589 vs. NCBI nr
Match: XP_022144916.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X3 [Momordica charantia])

HSP 1 Score: 340 bits (873), Expect = 1.92e-117
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0 

Query: 2   RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA 61
           RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA
Sbjct: 15  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA 74

Query: 62  LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF 121
           LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF
Sbjct: 75  LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF 134

Query: 122 PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS 180
           PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Sbjct: 135 PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS 193

[Close]
BLAST of MC09g0589 vs. NCBI nr
Match: XP_022144908.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 337 bits (864), Expect = 4.84e-116
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0 

Query: 2   RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA 61
           RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA
Sbjct: 15  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA 74

Query: 62  LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF 121
           LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF
Sbjct: 75  LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF 134

Query: 122 PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ 178
           PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ
Sbjct: 135 PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ 191

[Close]
BLAST of MC09g0589 vs. NCBI nr
Match: XP_022144899.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 337 bits (864), Expect = 5.02e-116
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0 

Query: 2   RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA 61
           RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA
Sbjct: 15  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA 74

Query: 62  LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF 121
           LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF
Sbjct: 75  LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF 134

Query: 122 PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ 178
           PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ
Sbjct: 135 PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ 191

[Close]
BLAST of MC09g0589 vs. NCBI nr
Match: KAA0067975.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 [Cucumis melo var. makuwa])

HSP 1 Score: 287 bits (735), Expect = 2.70e-96
Identity = 152/180 (84.44%), Postives = 160/180 (88.89%), Query Frame = 0 

Query: 1   QRGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPF 60
           QRGFK+HPQRNPNY+FQA++CSSSLLGS  TSSK+   LA   PPLKPAAA+E  RT PF
Sbjct: 23  QRGFKYHPQRNPNYKFQAIKCSSSLLGS-FTSSKILPSLAYVIPPLKPAAAYEAARTIPF 82

Query: 61  ALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGK 120
           ALQDASMAASDF  +M LADLDP TAKLAI FLGP LS FSFLFI RIVMSWYPKLPVGK
Sbjct: 83  ALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGK 142

Query: 121 FPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS 180
           FPYV+AYAPTEPLLI TRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Sbjct: 143 FPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS 201

[Close]
BLAST of MC09g0589 vs. NCBI nr
Match: XP_008451549.1 (PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic [Cucumis melo])

HSP 1 Score: 286 bits (731), Expect = 8.07e-96
Identity = 151/179 (84.36%), Postives = 159/179 (88.83%), Query Frame = 0 

Query: 2   RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA 61
           RGFK+HPQRNPNY+FQA++CSSSLLGS  TSSK+   LA   PPLKPAAA+E  RT PFA
Sbjct: 15  RGFKYHPQRNPNYKFQAIKCSSSLLGS-FTSSKILPSLAYVIPPLKPAAAYEAARTIPFA 74

Query: 62  LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF 121
           LQDASMAASDF  +M LADLDP TAKLAI FLGP LS FSFLFI RIVMSWYPKLPVGKF
Sbjct: 75  LQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKF 134

Query: 122 PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS 180
           PYV+AYAPTEPLLI TRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Sbjct: 135 PYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS 192

[Close]
BLAST of MC09g0589 vs. ExPASy TrEMBL
Match: A0A6J1CUU2 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X3 OS=Momordica charantia OX=3673 GN=LOC111014465 PE=4 SV=1)

HSP 1 Score: 340 bits (873), Expect = 9.28e-118
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0 

Query: 2   RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA 61
           RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA
Sbjct: 15  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA 74

Query: 62  LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF 121
           LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF
Sbjct: 75  LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF 134

Query: 122 PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS 180
           PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Sbjct: 135 PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS 193

[Close]
BLAST of MC09g0589 vs. ExPASy TrEMBL
Match: A0A6J1CUI3 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014465 PE=4 SV=1)

HSP 1 Score: 337 bits (864), Expect = 2.35e-116
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0 

Query: 2   RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA 61
           RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA
Sbjct: 15  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA 74

Query: 62  LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF 121
           LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF
Sbjct: 75  LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF 134

Query: 122 PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ 178
           PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ
Sbjct: 135 PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ 191

[Close]
BLAST of MC09g0589 vs. ExPASy TrEMBL
Match: A0A6J1CTL8 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014465 PE=4 SV=1)

HSP 1 Score: 337 bits (864), Expect = 2.43e-116
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0 

Query: 2   RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA 61
           RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA
Sbjct: 15  RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA 74

Query: 62  LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF 121
           LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF
Sbjct: 75  LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF 134

Query: 122 PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ 178
           PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ
Sbjct: 135 PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQ 191

[Close]
BLAST of MC09g0589 vs. ExPASy TrEMBL
Match: A0A5A7VQJ0 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001630 PE=4 SV=1)

HSP 1 Score: 287 bits (735), Expect = 1.31e-96
Identity = 152/180 (84.44%), Postives = 160/180 (88.89%), Query Frame = 0 

Query: 1   QRGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPF 60
           QRGFK+HPQRNPNY+FQA++CSSSLLGS  TSSK+   LA   PPLKPAAA+E  RT PF
Sbjct: 23  QRGFKYHPQRNPNYKFQAIKCSSSLLGS-FTSSKILPSLAYVIPPLKPAAAYEAARTIPF 82

Query: 61  ALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGK 120
           ALQDASMAASDF  +M LADLDP TAKLAI FLGP LS FSFLFI RIVMSWYPKLPVGK
Sbjct: 83  ALQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGK 142

Query: 121 FPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS 180
           FPYV+AYAPTEPLLI TRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Sbjct: 143 FPYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS 201

[Close]
BLAST of MC09g0589 vs. ExPASy TrEMBL
Match: A0A1S3BSI7 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492796 PE=4 SV=1)

HSP 1 Score: 286 bits (731), Expect = 3.91e-96
Identity = 151/179 (84.36%), Postives = 159/179 (88.83%), Query Frame = 0 

Query: 2   RGFKHHPQRNPNYRFQALQCSSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFA 61
           RGFK+HPQRNPNY+FQA++CSSSLLGS  TSSK+   LA   PPLKPAAA+E  RT PFA
Sbjct: 15  RGFKYHPQRNPNYKFQAIKCSSSLLGS-FTSSKILPSLAYVIPPLKPAAAYEAARTIPFA 74

Query: 62  LQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKF 121
           LQDASMAASDF  +M LADLDP TAKLAI FLGP LS FSFLFI RIVMSWYPKLPVGKF
Sbjct: 75  LQDASMAASDFVNSMTLADLDPGTAKLAISFLGPSLSVFSFLFIARIVMSWYPKLPVGKF 134

Query: 122 PYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS 180
           PYV+AYAPTEPLLI TRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS
Sbjct: 135 PYVIAYAPTEPLLIATRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLLVLLSQQVS 192

[Close]
BLAST of MC09g0589 vs. TAIR 10
Match: AT5G36120.1 (cofactor assembly, complex C (B6F) )

HSP 1 Score: 178.7 bits (452), Expect = 4.1e-45
Identity = 94/126 (74.60%), Postives = 106/126 (84.13%), Query Frame = 0 

Query: 53  EGTRTTPFALQDASMAASDFTKNMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSW 112
           E   TT    Q  S+  S+  +N++LADLDP TAKLAIG LGP LSAF FLFI+RIVMSW
Sbjct: 48  EAATTTNLIRQTNSI--SESLRNISLADLDPGTAKLAIGILGPALSAFGFLFILRIVMSW 107

Query: 113 YPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPLGGVDVTPVVWFGLVSFLNEILLGPQGLL 172
           YPKLPV KFPYV+AYAPTEP+L+ TRKVIPPL GVDVTPVVWFGLVSFL+EIL+GPQGLL
Sbjct: 108 YPKLPVDKFPYVLAYAPTEPILVQTRKVIPPLAGVDVTPVVWFGLVSFLSEILVGPQGLL 167

Query: 173 VLLSQQ 179
           VL+SQQ
Sbjct: 168 VLVSQQ 171

[Close]
BLAST of MC09g0589 vs. TAIR 10
Match: AT4G27990.1 (YGGT family protein )

HSP 1 Score: 43.5 bits (101), Expect = 2.1e-04
Identity = 24/79 (30.38%), Postives = 45/79 (56.96%), Query Frame = 0 

Query: 93  LGPFLSAFSFLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLLIVTRKVIPPL-GGVDVTP 152
           L  +L  +S + +VR+++SW+P +P  + P        +P L + R +IPP+   +DV+P
Sbjct: 140 LSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSP 199

Query: 153 VVWFGLVSFLNEILLGPQG 171
           ++ F ++  L  IL   +G
Sbjct: 200 LLAFAVLGTLGSILNNSRG 218

[Close]
BLAST of MC09g0589 vs. TAIR 10
Match: AT5G21920.1 (YGGT family protein )

HSP 1 Score: 43.5 bits (101), Expect = 2.1e-04
Identity = 23/62 (37.10%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 96  FLSAFSFLFIVRIVMSWYPKLPVGKFPYVVAYAPT--EPLLIVTRKVIPPLGGVDVTPVV 155
           FL+ ++ + +VR+V++W+P  P    P +V    T  +P L + R  IPPLGG+D++P++
Sbjct: 141 FLNIYNTILVVRLVLTWFPSAP----PAIVNPLSTLCDPYLNIFRGFIPPLGGLDLSPIL 198

[Close]
BLAST of MC09g0589 vs. TAIR 10
Match: AT5G21920.2 (YGGT family protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.5e-04
Identity = 40/134 (29.85%), Postives = 64/134 (47.76%), Query Frame = 0 

Query: 24  SLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTPFALQDASMAASDFTKNMALADLDP 83
           SL+ +T         LAS  P  + A     T    FA+ +   AA        L     
Sbjct: 64  SLISATEKFKGFLHSLASKNPLFQEAIRLRNTTRVRFAMSNHGFAA-------VLPGDSV 123

Query: 84  ATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKFPYVVAYAPT--EPLLIVTRKVI 143
           A   +A G +  FL+ ++ + +VR+V++W+P  P    P +V    T  +P L + R  I
Sbjct: 124 AGLVVANGLIN-FLNIYNTILVVRLVLTWFPSAP----PAIVNPLSTLCDPYLNIFRGFI 183

Query: 144 PPLGGVDVTPVVWF 156
           PPLGG+D++P++ F
Sbjct: 184 PPLGGLDLSPILAF 185

[Close]
BLAST of MC09g0589 vs. TAIR 10
Match: AT3G07430.1 (YGGT family protein )

HSP 1 Score: 42.4 bits (98), Expect = 4.6e-04
Identity = 40/157 (25.48%), Postives = 76/157 (48.41%), Query Frame = 0 

Query: 22  SSSLLGSTVTSSKVALLLASATPPLKPAAAFEGTRTTP-------FALQDASMAASDFTK 81
           SS+L GST + + +A L  + T  L    +     ++P       F+L  A        +
Sbjct: 77  SSTLTGSTRSLATLAALAIAVTRVLAQKLSLAIQTSSPVIADGLRFSLSTAGPVFFASLR 136

Query: 82  NMALADLDPATAKLAIGFLGPFLSAFSFLFIVRIVMSWYPKLPVGKFPYVVAYAPTEPLL 141
           +     L+     +A+G +  +L  +S + +VR+++SW+P +P  + P        +P L
Sbjct: 137 DRPPGYLNTPLTVVAVG-IKKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYL 196

Query: 142 IVTRKVIPPL-GGVDVTPVVWFGLVSFLNEILLGPQG 171
            + R +IPP+   +DV+P++ F ++  L  I+ G  G
Sbjct: 197 NLFRNIIPPIFDTLDVSPLLAFAVLGTLGSIVHGSTG 232

The following BLAST results are available for this feature:
BLAST of MC09g0589 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RWM75.8e-4474.60Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic OS=Arabidop... [more]
BLAST of MC09g0589 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022144916.11.92e-117100.00protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X3 ... [more]
XP_022144908.14.84e-116100.00protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X2 ... [more]
XP_022144899.15.02e-116100.00protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X1 ... [more]
KAA0067975.12.70e-9684.44protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 [Cucumis melo var. makuwa][more]
XP_008451549.18.07e-9684.36PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic ... [more]
BLAST of MC09g0589 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CUU29.28e-118100.00protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X3 ... [more]
A0A6J1CUI32.35e-116100.00protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X2 ... [more]
A0A6J1CTL82.43e-116100.00protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic isoform X1 ... [more]
A0A5A7VQJ01.31e-9684.44Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3 OS=Cucumis melo var. makuw... [more]
A0A1S3BSI73.91e-9684.36protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic OS=Cucumis ... [more]
BLAST of MC09g0589 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G36120.14.1e-4574.60cofactor assembly, complex C (B6F) [more]
AT4G27990.12.1e-0430.38YGGT family protein [more]
AT5G21920.12.1e-0437.10YGGT family protein [more]
AT5G21920.23.5e-0429.85YGGT family protein [more]
AT3G07430.14.6e-0425.48YGGT family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003425CCB3/YggTPFAMPF02325YGGTcoord: 96..165
e-value: 3.1E-15
score: 56.3
IPR003425CCB3/YggTPANTHERPTHR33219YLMG HOMOLOG PROTEIN 2, CHLOROPLASTICcoord: 3..179
NoneNo IPR availablePANTHERPTHR33219:SF11PROTEIN COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, CHLOROPLASTICcoord: 3..179

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g0589.1MC09g0589.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane