MC09g0579 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0579
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC09: 5262750 .. 5263070 (+)
RNA-Seq Expression	MC09g0579
Synteny	MC09g0579

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTCTATGGCTGCGGGAGGAGTACTGCGCCGTCGAGCGACGGACAACCAAGACTTCCCGATCCTCATCAAGTTTCAGAAAGCTCACCCACGACGGCGAGAATCATCACCACCGCCGCCGGTTCACCAATCTCTTCGATCAGAATCAGTTCGAGTCCTCTGTTAATTACGCGGCGGCCGGCGGCGGCGGCGGCGGCGATGATAGGGCTAGGGCAACCATTAGTAGCGATCAGGCCGCTCAGATCTACGGCGGAATCGCGATCGTCGACTATCGGGCCAAGAAACCTGCTCCGGCGGCCGCCGATTTTCGATTTCGC

mRNA sequence

ATGGCGACTCTATGGCTGCGGGAGGAGTACTGCGCCGTCGAGCGACGGACAACCAAGACTTCCCGATCCTCATCAAGTTTCAGAAAGCTCACCCACGACGGCGAGAATCATCACCACCGCCGCCGGTTCACCAATCTCTTCGATCAGAATCAGTTCGAGTCCTCTGTTAATTACGCGGCGGCCGGCGGCGGCGGCGGCGGCGATGATAGGGCTAGGGCAACCATTAGTAGCGATCAGGCCGCTCAGATCTACGGCGGAATCGCGATCGTCGACTATCGGGCCAAGAAACCTGCTCCGGCGGCCGCCGATTTTCGATTTCGC

Coding sequence (CDS)

ATGGCGACTCTATGGCTGCGGGAGGAGTACTGCGCCGTCGAGCGACGGACAACCAAGACTTCCCGATCCTCATCAAGTTTCAGAAAGCTCACCCACGACGGCGAGAATCATCACCACCGCCGCCGGTTCACCAATCTCTTCGATCAGAATCAGTTCGAGTCCTCTGTTAATTACGCGGCGGCCGGCGGCGGCGGCGGCGGCGATGATAGGGCTAGGGCAACCATTAGTAGCGATCAGGCCGCTCAGATCTACGGCGGAATCGCGATCGTCGACTATCGGGCCAAGAAACCTGCTCCGGCGGCCGCCGATTTTCGATTTCGC

Protein sequence

MATLWLREEYCAVERRTTKTSRSSSSFRKLTHDGENHHHRRRFTNLFDQNQFESSVNYAAAGGGGGGDDRARATISSDQAAQIYGGIAIVDYRAKKPAPAAADFRFR

Homology

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BLAST of MC09g0579 vs. ExPASy TrEMBL
Match: A0A0A0K673 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G404810 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.91e-08
Identity = 47/111 (42.34%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 1   MATLWLREEY--CAVERRTTKTSRSSSS----FRKLTHDGENHHHRRRFTNLFDQNQFES 60
           MA  + +EEY   + ER    TSRS        +K  ++GE  H RR   N      FE 
Sbjct: 1   MAAFFKKEEYHYFSFERTRAITSRSPQPPPPLHKKSPYEGEIQHLRRSKNNCDHTLIFEC 60

Query: 61  SVNYAAAGGGGGGDDRARATISSDQAAQIYGGIAIVDYRAKKPAPAAADFR 105
           SVN AAA         A+ TI+S QAAQ+YGGI IVD+  KKPA    +FR
Sbjct: 61  SVNSAAAPN----VREAKTTINSKQAAQMYGGINIVDFWTKKPATTTGEFR 107

The following BLAST results are available for this feature:

BLAST of MC09g0579 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g0579 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g0579 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K673	5.91e-08	42.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G404810 PE=4 SV=1	[more]

BLAST of MC09g0579 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..39

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g0579.1	MC09g0579.1	mRNA