MC09g0381 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0381
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	GAG1At protein
Location	MC09: 3481545 .. 3482959 (+)
RNA-Seq Expression	MC09g0381
Synteny	MC09g0381

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATGTTAGGATTAAAGTTGTAATTTAACATTTTTATAATTAGGCTTAGGCAGGTACATAGAAGAAGGTAGATGGAGTCAATTTAGTCCCAAGTTTGGACACGAAAATCATCGTAACCAAACGCTCCCCAAAGGTTGGCTGAGCATTGAGCAATCAATCCGGAAGTGCAGGAGTTCCACAGACTATAGGCGGAAAAAATGGGCGGCGAGGGCAAAATCGGCGGTGCCAGTGGAGGAGGAGGAGGCGGCGGCGGAGGAGGAGCTGGTTTTAGATCGAGAATGGAGCACTTCTTGTACAGCGGCGACAAAAAGCACGTCGCGGCCGGCATCGCCGTCATTAGCATAATTTTCGGCATCCCTTGGGTCCTCATGAGTCGAGGTTCGTTATTTGTTTCCTTCACTAACTTTTGTATCTGTTACTCGACCTTTGTTTCTGGCTATACGTGGGAAAACGAAAACAGAACTGAAGTTTTCAAGTCATCGTTTTTGTTTTCTCGAGAATTGGAGAAGTGAAACCCTCTGTTGATTTTGCAATAAGAAGATTTCAGTTCTTGAATGGAGTTATATTCTAAACTTACTTCTTAATTTGGATTGCAATAGTGGACGTTTGGAAGTATGTTCACGTTTTCCAAGTGTAATTTTAGGGATTCAGAATCTAGGCAGTTTCAATAGGCTACGCGTATGCTTAATCTTGTTTGCCTCATGGCACTGACTGGGTTAGGTTTTGGAAATTGTAGGTTTCTCTGATTGGGTGCTCCTGTAATTTGGATTGAGAAACGGTAGCATATCAGGGCAATATCATTAAGGATTTTGATACTGATTTTTCAAACTTCAGAAAGCTTCCTCATAGAAGTAAAAAAAAGTGATGCCTTGGCGCTCTATGGGAGGTGCTTTACAACAACCTATTTGGGTGATCATGTCTTTAAAAAGTTGTTTCTCAGTTCACTTCTAGTTCGTTTTTGGTGGACTTGTTTTTAGCTCAATTGAAGCTCTTCTTTCTGATAGAATTATAGGTTAGGCTCTTGAATAGCAATTTCAGTAGAAGTCACCCAAAATACCTCTTAAAAATGGTTTGGGAATCATAGTATGAGAACTATCTTTCAGACCCCCTACTCAAGTAAAACTATTACAACTGTTCGTTTTTAGTGTTCGGATCTACACCCAATAGATCTATTTGCCTTTACCCTTATATATATATATATATATATATATATATTTATAAACAATGTGGTTCAATAGTTCTAAGTCTTTATTTGAATTGGATACGACTTCTAGGAGGTTGTAAATCTAAATGACGTATCGGTCTCACCCTTTAATTGTTTACAGGATCAAAACATCAGTCTCATCAAGATTACATGGAAAGAGCTGACAAAGCACGAAGCCAGAGACTCTCTTCAGGTTCATCTCAAGCTAAA

mRNA sequence

TAAATGTTAGGATTAAAGTTGTAATTTAACATTTTTATAATTAGGCTTAGGCAGGTACATAGAAGAAGGTAGATGGAGTCAATTTAGTCCCAAGTTTGGACACGAAAATCATCGTAACCAAACGCTCCCCAAAGGTTGGCTGAGCATTGAGCAATCAATCCGGAAGTGCAGGAGTTCCACAGACTATAGGCGGAAAAAATGGGCGGCGAGGGCAAAATCGGCGGTGCCAGTGGAGGAGGAGGAGGCGGCGGCGGAGGAGGAGCTGGTTTTAGATCGAGAATGGAGCACTTCTTGTACAGCGGCGACAAAAAGCACGTCGCGGCCGGCATCGCCGTCATTAGCATAATTTTCGGCATCCCTTGGGTCCTCATGAGTCGAGGATCAAAACATCAGTCTCATCAAGATTACATGGAAAGAGCTGACAAAGCACGAAGCCAGAGACTCTCTTCAGGTTCATCTCAAGCTAAA

Coding sequence (CDS)

ATGGGCGGCGAGGGCAAAATCGGCGGTGCCAGTGGAGGAGGAGGAGGCGGCGGCGGAGGAGGAGCTGGTTTTAGATCGAGAATGGAGCACTTCTTGTACAGCGGCGACAAAAAGCACGTCGCGGCCGGCATCGCCGTCATTAGCATAATTTTCGGCATCCCTTGGGTCCTCATGAGTCGAGGATCAAAACATCAGTCTCATCAAGATTACATGGAAAGAGCTGACAAAGCACGAAGCCAGAGACTCTCTTCAGGTTCATCTCAAGCTAAA

Protein sequence

MGGEGKIGGASGGGGGGGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQSHQDYMERADKARSQRLSSGSSQAK

Homology

[Close]

BLAST of MC09g0381 vs. NCBI nr
Match: XP_022150938.1 (uncharacterized protein LOC111018966 [Momordica charantia])

HSP 1 Score: 163 bits (413), Expect = 2.18e-50
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MGGEGKIGGASGGGGGGGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSR 60
          MGGEGKIGGASGGGGGGGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSR
Sbjct: 1  MGGEGKIGGASGGGGGGGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSR 60

Query: 61 GSKHQSHQDYMERADKARSQRLSSGSSQAK 90
          GSKHQSHQDYMERADKARSQRLSSGSSQAK
Sbjct: 61 GSKHQSHQDYMERADKARSQRLSSGSSQAK 90

[Close]

BLAST of MC09g0381 vs. NCBI nr
Match: XP_010094051.1 (uncharacterized protein LOC21401046 [Morus notabilis] >EXB55141.1 hypothetical protein L484_018067 [Morus notabilis])

HSP 1 Score: 134 bits (337), Expect = 8.32e-38
Identity = 68/85 (80.00%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 6   KIGGASGGGGGGGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQ 65
           KIG   GGGGGG GGG GFR+R++H+LYSG+KKHVAAGIA+I+I+FGIPWVLM+RGSKHQ
Sbjct: 82  KIGSGGGGGGGGSGGGGGFRARIDHYLYSGEKKHVAAGIAIITIVFGIPWVLMNRGSKHQ 141

Query: 66  SHQDYMERADKARSQRLSSGSSQAK 90
           SHQDY+E+ADKARSQRLSSGSS AK
Sbjct: 142 SHQDYLEKADKARSQRLSSGSSSAK 166

[Close]

BLAST of MC09g0381 vs. NCBI nr
Match: XP_022953259.1 (uncharacterized protein LOC111455862 [Cucurbita moschata] >XP_023547796.1 uncharacterized protein LOC111806650 [Cucurbita pepo subsp. pepo] >KAG6575633.1 hypothetical protein SDJN03_26272, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014187.1 hypothetical protein SDJN02_24361 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 128 bits (321), Expect = 1.91e-36
Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 19 GGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQSHQDYMERADKAR 78
          GGG GFRSRMEH+LYSG+KKHVAAGI VI IIFGIPW LM+RGSKHQSHQDYMERADKAR
Sbjct: 12 GGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGSKHQSHQDYMERADKAR 71

Query: 79 SQRLSSGSSQAK 90
          SQRLSSGSS AK
Sbjct: 72 SQRLSSGSSSAK 83

[Close]

BLAST of MC09g0381 vs. NCBI nr
Match: XP_022992483.1 (uncharacterized protein LOC111488802 [Cucurbita maxima])

HSP 1 Score: 128 bits (321), Expect = 1.91e-36
Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 19 GGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQSHQDYMERADKAR 78
          GGG GFRSRMEH+LYSG+KKHVAAGI VI IIFGIPW LM+RGSKHQSHQDYMERADKAR
Sbjct: 12 GGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGSKHQSHQDYMERADKAR 71

Query: 79 SQRLSSGSSQAK 90
          SQRLSSGSS AK
Sbjct: 72 SQRLSSGSSSAK 83

[Close]

BLAST of MC09g0381 vs. NCBI nr
Match: KAB1223321.1 (hypothetical protein CJ030_MR2G001433 [Morella rubra])

HSP 1 Score: 128 bits (321), Expect = 2.02e-36
Identity = 62/73 (84.93%), Postives = 69/73 (94.52%), Query Frame = 0


Query: 18 GGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQSHQDYMERADKA 77
          GGGG GFRSR+EH+LYSGDKKHV AGIA+IS+IFG+PW LMSRGSKHQSHQDYME+ADKA
Sbjct: 13 GGGGGGFRSRVEHYLYSGDKKHVVAGIAIISVIFGVPWYLMSRGSKHQSHQDYMEKADKA 72

Query: 78 RSQRLSSGSSQAK 90
          RSQRLSSG+S AK
Sbjct: 73 RSQRLSSGASSAK 85

[Close]

BLAST of MC09g0381 vs. ExPASy TrEMBL
Match: A0A6J1DAT5 (uncharacterized protein LOC111018966 OS=Momordica charantia OX=3673 GN=LOC111018966 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 1.05e-50
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MGGEGKIGGASGGGGGGGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSR 60
          MGGEGKIGGASGGGGGGGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSR
Sbjct: 1  MGGEGKIGGASGGGGGGGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSR 60

Query: 61 GSKHQSHQDYMERADKARSQRLSSGSSQAK 90
          GSKHQSHQDYMERADKARSQRLSSGSSQAK
Sbjct: 61 GSKHQSHQDYMERADKARSQRLSSGSSQAK 90

[Close]

BLAST of MC09g0381 vs. ExPASy TrEMBL
Match: W9QVG6 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018067 PE=4 SV=1)

HSP 1 Score: 134 bits (337), Expect = 4.03e-38
Identity = 68/85 (80.00%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 6   KIGGASGGGGGGGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQ 65
           KIG   GGGGGG GGG GFR+R++H+LYSG+KKHVAAGIA+I+I+FGIPWVLM+RGSKHQ
Sbjct: 82  KIGSGGGGGGGGSGGGGGFRARIDHYLYSGEKKHVAAGIAIITIVFGIPWVLMNRGSKHQ 141

Query: 66  SHQDYMERADKARSQRLSSGSSQAK 90
           SHQDY+E+ADKARSQRLSSGSS AK
Sbjct: 142 SHQDYLEKADKARSQRLSSGSSSAK 166

[Close]

BLAST of MC09g0381 vs. ExPASy TrEMBL
Match: A0A6J1JZC0 (uncharacterized protein LOC111488802 OS=Cucurbita maxima OX=3661 GN=LOC111488802 PE=4 SV=1)

HSP 1 Score: 128 bits (321), Expect = 9.24e-37
Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 19 GGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQSHQDYMERADKAR 78
          GGG GFRSRMEH+LYSG+KKHVAAGI VI IIFGIPW LM+RGSKHQSHQDYMERADKAR
Sbjct: 12 GGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGSKHQSHQDYMERADKAR 71

Query: 79 SQRLSSGSSQAK 90
          SQRLSSGSS AK
Sbjct: 72 SQRLSSGSSSAK 83

[Close]

BLAST of MC09g0381 vs. ExPASy TrEMBL
Match: A0A6J1GP50 (uncharacterized protein LOC111455862 OS=Cucurbita moschata OX=3662 GN=LOC111455862 PE=4 SV=1)

HSP 1 Score: 128 bits (321), Expect = 9.24e-37
Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 19 GGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQSHQDYMERADKAR 78
          GGG GFRSRMEH+LYSG+KKHVAAGI VI IIFGIPW LM+RGSKHQSHQDYMERADKAR
Sbjct: 12 GGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGSKHQSHQDYMERADKAR 71

Query: 79 SQRLSSGSSQAK 90
          SQRLSSGSS AK
Sbjct: 72 SQRLSSGSSSAK 83

[Close]

BLAST of MC09g0381 vs. ExPASy TrEMBL
Match: A0A6A1WDR3 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G001433 PE=4 SV=1)

HSP 1 Score: 128 bits (321), Expect = 9.79e-37
Identity = 62/73 (84.93%), Postives = 69/73 (94.52%), Query Frame = 0


Query: 18 GGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQSHQDYMERADKA 77
          GGGG GFRSR+EH+LYSGDKKHV AGIA+IS+IFG+PW LMSRGSKHQSHQDYME+ADKA
Sbjct: 13 GGGGGGFRSRVEHYLYSGDKKHVVAGIAIISVIFGVPWYLMSRGSKHQSHQDYMEKADKA 72

Query: 78 RSQRLSSGSSQAK 90
          RSQRLSSG+S AK
Sbjct: 73 RSQRLSSGASSAK 85

[Close]

BLAST of MC09g0381 vs. TAIR 10
Match: AT1G80890.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16000.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.1 bits (266), Expect = 7.6e-24
Identity = 50/71 (70.42%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 20 GGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSRGSKHQSHQDYMERADKARS 79
          GG G R++MEH++YSG+KKHV AGI +ISIIFGIPW LM++GSKH+SHQDY+E+ADKAR 
Sbjct: 10 GGGGIRAKMEHYVYSGEKKHVLAGIGIISIIFGIPWYLMNQGSKHRSHQDYLEKADKARK 69

Query: 80 QRLSSGSSQAK 91
           RLSS SS  K
Sbjct: 70 ARLSSSSSSDK 80

[Close]

BLAST of MC09g0381 vs. TAIR 10
Match: AT1G16000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.8 bits (242), Expect = 4.6e-21
Identity = 54/90 (60.00%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 1  MGGEGKIGGASGGGGGGGGGGAGFRSRMEHFLYSGDKKHVAAGIAVISIIFGIPWVLMSR 60
          MG E K    + GG     GG GFR++MEH++YSG+KKHV  GI +++IIFG+PW LM++
Sbjct: 1  MGNETK----TNGGPASMAGGGGFRAKMEHYVYSGEKKHVLVGIGIVTIIFGVPWYLMTQ 60

Query: 61 GSKHQSHQDYMERADKARSQRLSSGSSQAK 91
          GSKHQSHQDYM++ADKAR  RLSS SS  K
Sbjct: 61 GSKHQSHQDYMDKADKARKARLSSSSSANK 86

The following BLAST results are available for this feature:

BLAST of MC09g0381 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g0381 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150938.1	2.18e-50	100.00	uncharacterized protein LOC111018966 [Momordica charantia]	[more]
XP_010094051.1	8.32e-38	80.00	uncharacterized protein LOC21401046 [Morus notabilis] >EXB55141.1 hypothetical p...	[more]
XP_022953259.1	1.91e-36	88.89	uncharacterized protein LOC111455862 [Cucurbita moschata] >XP_023547796.1 unchar...	[more]
XP_022992483.1	1.91e-36	88.89	uncharacterized protein LOC111488802 [Cucurbita maxima]	[more]
KAB1223321.1	2.02e-36	84.93	hypothetical protein CJ030_MR2G001433 [Morella rubra]	[more]

BLAST of MC09g0381 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAT5	1.05e-50	100.00	uncharacterized protein LOC111018966 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
W9QVG6	4.03e-38	80.00	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018067 PE=4 SV=1	[more]
A0A6J1JZC0	9.24e-37	88.89	uncharacterized protein LOC111488802 OS=Cucurbita maxima OX=3661 GN=LOC111488802...	[more]
A0A6J1GP50	9.24e-37	88.89	uncharacterized protein LOC111455862 OS=Cucurbita moschata OX=3662 GN=LOC1114558...	[more]
A0A6A1WDR3	9.79e-37	84.93	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G001433 PE=4 SV=1	[more]

BLAST of MC09g0381 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80890.1	7.6e-24	70.42	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16000.1	4.6e-21	60.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..79
None	No IPR available	PANTHER	PTHR35990	GAG1AT PROTEIN	coord: 14..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g0381.1	MC09g0381.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane