MC09g0340 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g0340
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDNA replication complex GINS protein PSF1-like
LocationMC09: 3011479 .. 3015544 (-)
RNA-Seq ExpressionMC09g0340
SyntenyMC09g0340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAGAATATACCGTTTATAATTTAGAGTTAGGTGTTTCAGTCCTTGATTTTAGCGCACGTGACACGTCACAGCACAATTTCCCGCCGGTTCATCTTTTTAACATTGATATTGAGAAAAATAAAAGCGCCAAAATCCCTAATTCTGAAGTTTGTTCCACCAATCCCTCTCCTCAAAAACAGGAATTCAATTATCAGCCGATGCTCAGAAGTTTTCGATAGGTACTGTAATTTGCAATCTAAAATTGTTACTTCTCTTTCTCCAATTCTGTATTCTCTGGACTTATTTCGTGATTGAACTTATATCCATTTGCCTGATTTATTTCGAGCAGGTTTCGATCTTTGTGTATCTGCGTAGTAATAAGGATCCTGGAACAAAAATCTTCTGTCGAAGAGGTGAAATTTGAATATGTATGGAAGAAAAGCATGCCAGTTGGTGAAAGAGCTTGCAAACGGCGAGAAAGGTCAGCTAACGCACTTCAATGTAAGTCCACATGCTCGTTTATGTATATGTGTACCTATTGAGATTGTATTATATTGGCTACCGAGTTTTGCCCTTGCAATTTCGTTTCCATTTGATGCTTGCAGCTATTTGCATTATTTGGAGATCTAGAAGGGCTAATTTTATAGTTGATTAAATGTTTTGCACTTTGTTCCATCGGATGATTAAGTCACTTGACGAATCGTTTACTTCGATAAATAAACTCAAATTTTCAAATTCATTTTCAAAGACTGTATTTTGCTCGTTTCTTTTTTCCAGCACTTCCAGGTTTCTGTGAAGTGATTATTTTACACTAATATACATATTCTTATAAACTAGCTTGTTTTTTATTGGATGCTGATTGCTGATGGCTAATTATTAAGCACTTTGAGTAAGTAGATGTCTTGAAAAGAATTTATGGTGGCTTAAATCACCTTGTTCAATGTCTTAGTGTTCAGATTTTTAATCTGTTTTCTATAGTAAATTCAGATTGCATCTAATATTTTGCTCTTTTGTTTGTACCTGTTTTTTCCCTGTGTTTCTTCAGAGCGATCTATTTGATCAGGCTATTTCAGAATGCGAGCAGCATCATCTTGAGCTTCAGTCCTTGATGAGGTTATAATATTCTACCTTTTCATTTACCTATTATTTGATAATGATAAGTTAGTTTAAGTGGTAATTGATCTGTTTTCGGTTGATCATGATTGGTAGGAAAAAAAGGTAGTTAATTCTAAGAGCACGCTCATTTGGTTAATAATAGTTCAATATATATAAGGAGAGCAATCTTGAGGAATGACAGAGGTTCACATTTTCATGAGTAGTGATTTTATCACGGTTAATGCTGATGGTCTCGTATGGGCCACCTAGTGAGTACCATCGACTGAGATTTCTTTTATCCAATTTCCGTCCATGAGATTTCTTTTATCCAATTTCCGTCCATTCTGCCCTCCATTCCATAATATGGTATGAAAGCTTTCAAGAACAGAAGTCAACTCAAGGCTTCATTTTATTGGCAGTAGCACTTGGGACCTATCTTTATCCCAGGAACAGTGTCCTTGGTCGATGATAGAACTATAAGATATGAATTTCAGGTACCTTTTACTCGTTAACAAGTTTGATAGTTTGAGAAAATCTTCATCCATTTCTCTTGAAAATCCACACCGTTATATCAGTTGCAATATGTATCCCAGGAACTATCCCAGTAAGTTCACTAGAGTCCTGAACTTGCTACCGTATATTCTCGACTCATTGCATTTAAGATTGTGTCAAAAATCTCCCTGATTGAACTGTCACATGTAGAAAGGAATGAAGTCATGGATGGCACAAGACATTTGCTCTCTCTTTAGTAACAGTTGCATCTAATAAAATTGGAAGGTTAACCCAAATGCTACCTCTTGTTGTGTCACTTAAACAAATAACCAAATGCTGAAAGCTGACCAGCCATGTATTCACTGTCGCTCTGGTTGTGAAAGCGCCTAAACCAATGAATTATAACTCTTCAATTTATGTAAGTGAGCAAAGAGAAATAGTGCCACTTGTATGCGTTTAAGTACTGGTCTAGAATCACTGGCTACCTAAATTAAAAGACAGTATTTCAGGATGACTCAATATAGTTGACATGATGATCTGAAACAGGAAAATACAGGAAGAAGGATTGGATTTACAGACGACTAAGAACGAAGATCATTTTGGTGCGCTCATTCACCACCTTTCATTAGTTCGCAATAAACGCTGCCTCATGGCTTATGTGTATGTCTAATATTGTGAGATAACTATGAGGAACTGACTTTTACCTGGTTTTCTGGGTTCGGGATAATTATATTTGCCAGTTAAATGTTTTTATATATAAACAAGCAGGTATGATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGGTAGGATCTATGCTTCCACCAGAAATACAAGAGAAGCTTAGCAACTCAGAGGAAGAGTATTTTAAGAAGCATTCTGCATGTCTAAAAGCATACATGTCGAGACTGGAGTTGGAATTAACTGTGGTAATCTCTGACACCATTTTTCTATATATAATCTTTTTCCTTCTAAAATTTTAGGGAGCAAATTAATGAGAAATGTTTAAAATCTTTAACTTTCTCGTGTAATTTTCTTTAAAAGAAAAATTAAGGCTAATAAAGGGGTAATTACCCTCCTTCATTCTTGGCTTTTCGTTTACTCCTTTCCGATATATAATTGCAGTAGATAATTTAAAGCACTTGGTGGAAAATCATAAACCAATTTGAAACCACAACGCTTTAAAAACTTGTGCTTTTTTGCTTCCAACTCAAATTCCTCTAACAGAAATTTCCAAGTTTATCATTGGCAGGATATGGTGCCACCTAAGGATCCATATATCCAAGTGAGGGTCCTCGATGATATCGGTGAAGGAATCATACTCAGTGATGATAAAACAGCAAACTTTGCACGCCATTCTATACATTTTCTCAAACGAACTGATGCTGAGCAATTCATCTCACGGGTGAGAATCCCTTCCAATTTTGTTTCGCAGTTCCTCTTATTGCTTGCTTGAATGTCTTCCAAACTACTCATATTCTCTGAATAATAGGGGTTAATGGAGGAACTCAGAAGCTGAATTAAATATTCAAGATGGTGTTTCTGTAAATCGGGAGGGTTAAGAGCCAAATGAGGAGGGGAAAAAAATGTAAGCGCGAAGCCTTCCCATTTCTGTAAATTATTATATTTAAGGACAGATGTTTGCTTGATAACTTACATAGTGATTGGTTTCATTTCATGGTATGATTTTTAGAATCACGTCTGAGACGAGTCGAACTTGGATCTTCTCTCAGAAATATGTATCCCTTATCCTTTCCAAATTTGATTTCACCGACGGTTGCATCTCGGTAACAAAAACAGAGTATTATAGAAAAGGTTCACGACAGAGATCCTATAGCAAAACTGTTAGATCCATATTTAAAGGATAAAAGTTACTATTTCTTGTGTTGATATAGAAATCTAGTCTGCTGACGTGTCCAATTGAATAGGATGTTGGATGGATCTTGACGCTAGTGAAGTGCCTACCAAATATCTTTGGATGTTTAGTGTTCATGTGTGATGTGAATGACTTACCTCCACAATGGGTGCCCTGGGAAGGGCCATCTGTGTAGGACGTAGTGGCTGCTTTGTCTTCATCAGGGCATCGAGGGCTCTTTGCCACGTGCGCAAACCTCTCCCTTGAGGTACCTACGTGACTGGTCCCTGCTACCTTGTGGTACCGTGTAGTTTGTACATGCTTGTGCTCGATTTCTCACTTGTAACACCTCGTCATATGTTTGACTATTGAAAGTTGAAATGTATCTTTCAATCTGTATCGATAGGTCGAGGGCCGTTCACCCCTTCTTCATCACGAACTTATTGTATAGCTTCTTTCGAAACACGAGCAATTGTGATATCTTGCACTTTCTCATCTTCTTCCAAATTTCCCAATTCGGGTAGTTTCATAGTTTCATAGGATAATTGTAAACGAAAGGATCTAATGTTGTTCTGAAAATCTTTGTGGTCTCCTTTTATTACTTTATTTTGTTGGACAGTTCCATAGAATTGACATGTAAC

mRNA sequence

ACCAGAATATACCGTTTATAATTTAGAGTTAGGTGTTTCAGTCCTTGATTTTAGCGCACGTGACACGTCACAGCACAATTTCCCGCCGGTTCATCTTTTTAACATTGATATTGAGAAAAATAAAAGCGCCAAAATCCCTAATTCTGAAGTTTGTTCCACCAATCCCTCTCCTCAAAAACAGGAATTCAATTATCAGCCGATGCTCAGAAGTTTTCGATAGGTTTCGATCTTTGTGTATCTGCGTAGTAATAAGGATCCTGGAACAAAAATCTTCTGTCGAAGAGGTGAAATTTGAATATGTATGGAAGAAAAGCATGCCAGTTGGTGAAAGAGCTTGCAAACGGCGAGAAAGGTCAGCTAACGCACTTCAATAGCGATCTATTTGATCAGGCTATTTCAGAATGCGAGCAGCATCATCTTGAGCTTCAGTCCTTGATGAGGAAAATACAGGAAGAAGGATTGGATTTACAGACGACTAAGAACGAAGATCATTTTGGTGCGCTCATTCACCACCTTTCATTAGTTCGCAATAAACGCTGCCTCATGGCTTATGTGTATGATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGGTAGGATCTATGCTTCCACCAGAAATACAAGAGAAGCTTAGCAACTCAGAGGAAGAGTATTTTAAGAAGCATTCTGCATGTCTAAAAGCATACATGTCGAGACTGGAGTTGGAATTAACTGTGGATATGGTGCCACCTAAGGATCCATATATCCAAGTGAGGGTCCTCGATGATATCGGTGAAGGAATCATACTCAGTGATGATAAAACAGCAAACTTTGCACGCCATTCTATACATTTTCTCAAACGAACTGATGCTGAGCAATTCATCTCACGGGGGTTAATGGAGGAACTCAGAAGCTGAATTAAATATTCAAGATGGTGTTTCTGTAAATCGGGAGGGTTAAGAGCCAAATGAGGAGGGGAAAAAAATGTAAGCGCGAAGCCTTCCCATTTCTGTAAATTATTATATTTAAGGACAGATGTTTGCTTGATAACTTACATAGTGATTGGTTTCATTTCATGGTATGATTTTTAGAATCACGTCTGAGACGAGTCGAACTTGGATCTTCTCTCAGAAATATGTATCCCTTATCCTTTCCAAATTTGATTTCACCGACGGTTGCATCTCGGTAACAAAAACAGAGTATTATAGAAAAGGTTCACGACAGAGATCCTATAGCAAAACTGTTAGATCCATATTTAAAGGATAAAAGTTACTATTTCTTGTGTTGATATAGAAATCTAGTCTGCTGACGTGTCCAATTGAATAGGATGTTGGATGGATCTTGACGCTAGTGAAGTGCCTACCAAATATCTTTGGATGTTTAGTGTTCATGTGTGATGTGAATGACTTACCTCCACAATGGGTGCCCTGGGAAGGGCCATCTGTGTAGGACGTAGTGGCTGCTTTGTCTTCATCAGGGCATCGAGGGCTCTTTGCCACGTGCGCAAACCTCTCCCTTGAGGTACCTACGTGACTGGTCCCTGCTACCTTGTGGTACCGTGTAGTTTGTACATGCTTGTGCTCGATTTCTCACTTGTAACACCTCGTCATATGTTTGACTATTGAAAGTTGAAATGTATCTTTCAATCTGTATCGATAGGTCGAGGGCCGTTCACCCCTTCTTCATCACGAACTTATTGTATAGCTTCTTTCGAAACACGAGCAATTGTGATATCTTGCACTTTCTCATCTTCTTCCAAATTTCCCAATTCGGGTAGTTTCATAGTTTCATAGGATAATTGTAAACGAAAGGATCTAATGTTGTTCTGAAAATCTTTGTGGTCTCCTTTTATTACTTTATTTTGTTGGACAGTTCCATAGAATTGACATGTAAC

Coding sequence (CDS)

ATGTATGGAAGAAAAGCATGCCAGTTGGTGAAAGAGCTTGCAAACGGCGAGAAAGGTCAGCTAACGCACTTCAATAGCGATCTATTTGATCAGGCTATTTCAGAATGCGAGCAGCATCATCTTGAGCTTCAGTCCTTGATGAGGAAAATACAGGAAGAAGGATTGGATTTACAGACGACTAAGAACGAAGATCATTTTGGTGCGCTCATTCACCACCTTTCATTAGTTCGCAATAAACGCTGCCTCATGGCTTATGTGTATGATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGGTAGGATCTATGCTTCCACCAGAAATACAAGAGAAGCTTAGCAACTCAGAGGAAGAGTATTTTAAGAAGCATTCTGCATGTCTAAAAGCATACATGTCGAGACTGGAGTTGGAATTAACTGTGGATATGGTGCCACCTAAGGATCCATATATCCAAGTGAGGGTCCTCGATGATATCGGTGAAGGAATCATACTCAGTGATGATAAAACAGCAAACTTTGCACGCCATTCTATACATTTTCTCAAACGAACTGATGCTGAGCAATTCATCTCACGGGGGTTAATGGAGGAACTCAGAAGCTGA

Protein sequence

MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTTKNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYFKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFLKRTDAEQFISRGLMEELRS
Homology
BLAST of MC09g0340 vs. ExPASy Swiss-Prot
Match: Q7ZT47 (DNA replication complex GINS protein PSF1 OS=Xenopus laevis OX=8355 GN=gins1 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25
Identity = 74/204 (36.27%), Postives = 111/204 (54.41%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEG-LDLQT 60
           M+  KA +L++EL     GQL  FN D   Q + E +  + + Q+ + + + EG  DL  
Sbjct: 1   MFCEKAIELIRELQRASDGQLPAFNEDGIRQILEEMKALYEQNQADVNEAKTEGRSDLIP 60

Query: 61  TKNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120
           T           H  L+RN+RC++AY+YDR   IR+L W+ GS+LP  ++  +S  E ++
Sbjct: 61  T-------IKFRHCCLLRNRRCIVAYLYDRLLRIRALRWEYGSVLPSALRFHMSTEEMDW 120

Query: 121 FKKHSACLKAYMSRL----ELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARH 180
           F ++   L  YM  L     L++T DM PPK  YI+VR L D GE   + D  T    ++
Sbjct: 121 FNQYKRSLATYMRSLGGEEGLDITQDMKPPKSLYIEVRCLRDYGE-FEIDDGTTILLKKN 180

Query: 181 SIHFLKRTDAEQFISRGLMEELRS 200
           S HFL R   EQ I +G++E + S
Sbjct: 181 SQHFLPRWKCEQLIRQGVLEHVLS 196

BLAST of MC09g0340 vs. ExPASy Swiss-Prot
Match: A4IFH4 (DNA replication complex GINS protein PSF1 OS=Bos taurus OX=9913 GN=GINS1 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.1e-25
Identity = 74/204 (36.27%), Postives = 111/204 (54.41%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGL-DLQT 60
           M+  KA +LV+EL    +G+L  FN D   Q + E +  + + QS + + +  G  DL  
Sbjct: 1   MFCEKAMELVRELHRAAEGRLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSSGRGDLIP 60

Query: 61  TKNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120
           T           H SL+RN+RC +AY+YDR   IR+L W+ GS+LP  ++  +S  E ++
Sbjct: 61  T-------IKFRHCSLLRNQRCTVAYLYDRLLRIRALRWEYGSVLPSALRFHMSAEEMDW 120

Query: 121 FKKHSACLKAYMSRL----ELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARH 180
           F ++   L  YM  L     L++T DM PPK  YI+VR L D GE   + D  +    ++
Sbjct: 121 FNRYKKSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKDYGE-FEVEDGTSVLLKKN 180

Query: 181 SIHFLKRTDAEQFISRGLMEELRS 200
           S HFL R   EQ I +G++E + S
Sbjct: 181 SQHFLPRWKCEQLIRQGILEHVLS 196

BLAST of MC09g0340 vs. ExPASy Swiss-Prot
Match: Q14691 (DNA replication complex GINS protein PSF1 OS=Homo sapiens OX=9606 GN=GINS1 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.7e-25
Identity = 74/204 (36.27%), Postives = 110/204 (53.92%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEG-LDLQT 60
           M+  KA +L++EL    +GQL  FN D   Q + E +  + + QS + + +  G  DL  
Sbjct: 1   MFCEKAMELIRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSGGRSDLIP 60

Query: 61  TKNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120
           T           H SL+RN+RC +AY+YDR   IR+L W+ GS+LP  ++  ++  E E+
Sbjct: 61  T-------IKFRHCSLLRNRRCTVAYLYDRLLRIRALRWEYGSVLPNALRFHMAAEEMEW 120

Query: 121 FKKHSACLKAYMSRL----ELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARH 180
           F  +   L  YM  L     L++T DM PPK  YI+VR L D GE   + D  +    ++
Sbjct: 121 FNNYKRSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKDYGE-FEVDDGTSVLLKKN 180

Query: 181 SIHFLKRTDAEQFISRGLMEELRS 200
           S HFL R   EQ I +G++E + S
Sbjct: 181 SQHFLPRWKCEQLIRQGVLEHILS 196

BLAST of MC09g0340 vs. ExPASy Swiss-Prot
Match: Q9CZ15 (DNA replication complex GINS protein PSF1 OS=Mus musculus OX=10090 GN=Gins1 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.7e-25
Identity = 74/204 (36.27%), Postives = 110/204 (53.92%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGL-DLQT 60
           M+  KA +LV+EL    +GQL  FN D   Q + E +  + + QS + + +  G  DL  
Sbjct: 1   MFCEKAMELVRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSAGRGDLIP 60

Query: 61  TKNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120
           T           H +L+RN+RC +AY+YDR   IR+L W+ GS+LP  ++  +S  E E+
Sbjct: 61  T-------VKFRHCALLRNRRCTIAYLYDRLLRIRALRWEYGSVLPNSLRFHMSAEETEW 120

Query: 121 FKKHSACLKAYMSRL----ELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARH 180
           F  +   L  YM  L     L++T D+ PPK  YI+VR L D GE   + D  +    ++
Sbjct: 121 FNHYKKSLATYMRSLGGDEGLDITQDVKPPKSLYIEVRCLKDYGE-FEVDDGTSVLLKKN 180

Query: 181 SIHFLKRTDAEQFISRGLMEELRS 200
           S HFL R   EQ I +G++E + S
Sbjct: 181 SQHFLPRWKCEQLIRQGVLEHVLS 196

BLAST of MC09g0340 vs. ExPASy Swiss-Prot
Match: Q54HR6 (Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum OX=44689 GN=gins1 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.3e-23
Identity = 63/200 (31.50%), Postives = 113/200 (56.50%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60
           M+ + A +L+KEL   +   + H+N       I E    + +L   + + +E+       
Sbjct: 1   MFTKTAIELIKELRGTD--SIPHYNDTSIKATIDEMIALYEDLIKTITEHKEQ------- 60

Query: 61  KNEDHF--GALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVG-SMLPPEIQEKLSNSEE 120
           K E  +   A+  H S+ R+KRC++AY+ +R   I+   W  G S+LP +++E+LS +E 
Sbjct: 61  KKEPFYLQHAITFHNSINRDKRCILAYLNERLNRIKEYRWSSGQSLLPDQLKERLSQNEI 120

Query: 121 EYFKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSI 180
           ++F ++   L  Y S++ L+LT+D  PPK+ YI+VRV+ ++GE ++L+   T N   ++ 
Sbjct: 121 QFFSEYDKILTEYNSKVGLDLTIDPQPPKELYIEVRVIKELGE-VVLNSGCTVNLNLNTT 180

Query: 181 HFLKRTDAEQFISRGLMEEL 198
           HFLKR+D    +  G +E +
Sbjct: 181 HFLKRSDITNLVKNGSLEHI 190

BLAST of MC09g0340 vs. NCBI nr
Match: XP_022144990.1 (DNA replication complex GINS protein PSF1-like isoform X2 [Momordica charantia])

HSP 1 Score: 401 bits (1030), Expect = 5.93e-141
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120
           KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF
Sbjct: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120

Query: 121 KKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180
           KKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL
Sbjct: 121 KKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180

Query: 181 KRTDAEQFISRGLMEELRS 199
           KRTDAEQFISRGLMEELRS
Sbjct: 181 KRTDAEQFISRGLMEELRS 199

BLAST of MC09g0340 vs. NCBI nr
Match: XP_022144973.1 (DNA replication complex GINS protein PSF1-like isoform X1 [Momordica charantia])

HSP 1 Score: 396 bits (1018), Expect = 4.16e-139
Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYV-YDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHLSLVRNKRCLMAYV YDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLSLVRNKRCLMAYVRYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120

Query: 121 FKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180
           FKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF
Sbjct: 121 FKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180

Query: 181 LKRTDAEQFISRGLMEELRS 199
           LKRTDAEQFISRGLMEELRS
Sbjct: 181 LKRTDAEQFISRGLMEELRS 200

BLAST of MC09g0340 vs. NCBI nr
Match: XP_022139358.1 (DNA replication complex GINS protein PSF1-like [Momordica charantia])

HSP 1 Score: 390 bits (1001), Expect = 1.57e-136
Identity = 194/198 (97.98%), Postives = 195/198 (98.48%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELANGEKGQLTHFNSDLFDQ ISECEQHHLELQSLMRKIQEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120
           KNEDHFGALIHHLSLVRNKRCLMAYVY+RAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF
Sbjct: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120

Query: 121 KKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180
           KKHSA LK YMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL
Sbjct: 121 KKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180

Query: 181 KRTDAEQFISRGLMEELR 198
           KRTDAEQFISRGLMEELR
Sbjct: 181 KRTDAEQFISRGLMEELR 198

BLAST of MC09g0340 vs. NCBI nr
Match: XP_038897311.1 (probable DNA replication complex GINS protein PSF1 [Benincasa hispida])

HSP 1 Score: 365 bits (937), Expect = 9.30e-127
Identity = 179/199 (89.95%), Postives = 193/199 (96.98%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKEL +GEKGQLTHFNSDLF+Q ISEC+QHHLELQSL+RK+QEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELTSGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWK-VGSMLPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHL+LVRNKRCLMAYV++RAEIIRSLIWK VGSM+PPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLIWKIVGSMIPPEIQEKLSNSEEEY 120

Query: 121 FKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180
           FKKHSA +K YMS+LEL+LTVDMVPPKDPYIQVRVLDDIGEGI+LSDDKTANFA HSIHF
Sbjct: 121 FKKHSARVKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 181 LKRTDAEQFISRGLMEELR 198
           LKRTDAEQ+ISRGLMEELR
Sbjct: 181 LKRTDAEQYISRGLMEELR 199

BLAST of MC09g0340 vs. NCBI nr
Match: XP_004135842.1 (probable DNA replication complex GINS protein PSF1 [Cucumis sativus] >KGN45289.1 hypothetical protein Csa_016815 [Cucumis sativus])

HSP 1 Score: 365 bits (936), Expect = 1.32e-126
Identity = 179/198 (90.40%), Postives = 193/198 (97.47%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELA+GEKGQLTHFNSDLF+Q ISEC+QHHLELQSL+RK+QEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKV-GSMLPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHL+LVRNKRCLMAYV++RAEIIRSL+WKV GSM+PPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120

Query: 121 FKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180
           FKKHSA LK YMS+LEL+LTVDMVPPKDPYIQVRVLDDIGEGI+LSDDKTANFA HSIHF
Sbjct: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 181 LKRTDAEQFISRGLMEEL 197
           LKRTDAEQ+ISRGLMEEL
Sbjct: 181 LKRTDAEQYISRGLMEEL 198

BLAST of MC09g0340 vs. ExPASy TrEMBL
Match: A0A6J1CT73 (DNA replication complex GINS protein PSF1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014510 PE=3 SV=1)

HSP 1 Score: 401 bits (1030), Expect = 2.87e-141
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120
           KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF
Sbjct: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120

Query: 121 KKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180
           KKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL
Sbjct: 121 KKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180

Query: 181 KRTDAEQFISRGLMEELRS 199
           KRTDAEQFISRGLMEELRS
Sbjct: 181 KRTDAEQFISRGLMEELRS 199

BLAST of MC09g0340 vs. ExPASy TrEMBL
Match: A0A6J1CUP5 (DNA replication complex GINS protein PSF1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014510 PE=3 SV=1)

HSP 1 Score: 396 bits (1018), Expect = 2.01e-139
Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYV-YDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHLSLVRNKRCLMAYV YDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLSLVRNKRCLMAYVRYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120

Query: 121 FKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180
           FKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF
Sbjct: 121 FKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180

Query: 181 LKRTDAEQFISRGLMEELRS 199
           LKRTDAEQFISRGLMEELRS
Sbjct: 181 LKRTDAEQFISRGLMEELRS 200

BLAST of MC09g0340 vs. ExPASy TrEMBL
Match: A0A6J1CFF5 (DNA replication complex GINS protein PSF1-like OS=Momordica charantia OX=3673 GN=LOC111010311 PE=3 SV=1)

HSP 1 Score: 390 bits (1001), Expect = 7.59e-137
Identity = 194/198 (97.98%), Postives = 195/198 (98.48%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELANGEKGQLTHFNSDLFDQ ISECEQHHLELQSLMRKIQEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120
           KNEDHFGALIHHLSLVRNKRCLMAYVY+RAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF
Sbjct: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120

Query: 121 KKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180
           KKHSA LK YMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL
Sbjct: 121 KKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180

Query: 181 KRTDAEQFISRGLMEELR 198
           KRTDAEQFISRGLMEELR
Sbjct: 181 KRTDAEQFISRGLMEELR 198

BLAST of MC09g0340 vs. ExPASy TrEMBL
Match: A0A0A0K8U8 (Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433190 PE=3 SV=1)

HSP 1 Score: 365 bits (936), Expect = 6.40e-127
Identity = 179/198 (90.40%), Postives = 193/198 (97.47%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELA+GEKGQLTHFNSDLF+Q ISEC+QHHLELQSL+RK+QEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKV-GSMLPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHL+LVRNKRCLMAYV++RAEIIRSL+WKV GSM+PPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120

Query: 121 FKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180
           FKKHSA LK YMS+LEL+LTVDMVPPKDPYIQVRVLDDIGEGI+LSDDKTANFA HSIHF
Sbjct: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 181 LKRTDAEQFISRGLMEEL 197
           LKRTDAEQ+ISRGLMEEL
Sbjct: 181 LKRTDAEQYISRGLMEEL 198

BLAST of MC09g0340 vs. ExPASy TrEMBL
Match: A0A1S3CDY2 (probable DNA replication complex GINS protein PSF1 OS=Cucumis melo OX=3656 GN=LOC103499784 PE=3 SV=1)

HSP 1 Score: 362 bits (930), Expect = 5.25e-126
Identity = 178/199 (89.45%), Postives = 192/199 (96.48%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLV ELA+GEKGQLTHFNSDLF+Q ISEC+QHHLELQSL+RK+QEEGLDLQTT
Sbjct: 1   MYGRKACQLVTELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKV-GSMLPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHL+LVRNKRCLMAYV++RAE IRSLIWK+ GSM+PPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAETIRSLIWKLLGSMIPPEIQEKLSNSEEEY 120

Query: 121 FKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180
           FKKHSA LK YMS+LEL+LTVDMVPPKDPYIQVRVLDDIGEGI+LSDDKTANFA HSIHF
Sbjct: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 181 LKRTDAEQFISRGLMEELR 198
           LKRTDAEQ+ISRGLMEELR
Sbjct: 181 LKRTDAEQYISRGLMEELR 199

BLAST of MC09g0340 vs. TAIR 10
Match: AT1G80190.1 (partner of SLD five 1 )

HSP 1 Score: 281.2 bits (718), Expect = 6.5e-76
Identity = 136/200 (68.00%), Postives = 165/200 (82.50%), Query Frame = 0

Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRK  QL+K+ A GEKGQL  FNS LFD+ I EC+Q+H  +QSL+RK+Q+EGLD+Q  
Sbjct: 1   MYGRKGYQLIKDFATGEKGQLKPFNSKLFDETIEECDQNHHLIQSLIRKMQQEGLDVQNN 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSM---LPPEIQEKLSNSEE 120
           +N DH+GALIHHL+L+RNKRCLMAYVY+RAEI+R L W+VG     LP EIQEKL+  E+
Sbjct: 61  RNADHYGALIHHLALIRNKRCLMAYVYNRAEIVRDLAWRVGLELLDLPSEIQEKLTTLEK 120

Query: 121 EYFKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSI 180
           EYFK HS  LK+YM ++ +EL VDMVPPKDPYI+VR+LDDI EGI+LS DKT NFARHS+
Sbjct: 121 EYFKNHSVALKSYMGKVGIELNVDMVPPKDPYIKVRILDDIDEGIVLS-DKTTNFARHSM 180

Query: 181 HFLKRTDAEQFISRGLMEEL 198
           HFLKRTDAE +I+RG MEEL
Sbjct: 181 HFLKRTDAEPYIARGQMEEL 199

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q7ZT471.3e-2536.27DNA replication complex GINS protein PSF1 OS=Xenopus laevis OX=8355 GN=gins1 PE=... [more]
A4IFH45.1e-2536.27DNA replication complex GINS protein PSF1 OS=Bos taurus OX=9913 GN=GINS1 PE=2 SV... [more]
Q146916.7e-2536.27DNA replication complex GINS protein PSF1 OS=Homo sapiens OX=9606 GN=GINS1 PE=1 ... [more]
Q9CZ158.7e-2536.27DNA replication complex GINS protein PSF1 OS=Mus musculus OX=10090 GN=Gins1 PE=1... [more]
Q54HR66.3e-2331.50Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum O... [more]
Match NameE-valueIdentityDescription
XP_022144990.15.93e-141100.00DNA replication complex GINS protein PSF1-like isoform X2 [Momordica charantia][more]
XP_022144973.14.16e-13999.50DNA replication complex GINS protein PSF1-like isoform X1 [Momordica charantia][more]
XP_022139358.11.57e-13697.98DNA replication complex GINS protein PSF1-like [Momordica charantia][more]
XP_038897311.19.30e-12789.95probable DNA replication complex GINS protein PSF1 [Benincasa hispida][more]
XP_004135842.11.32e-12690.40probable DNA replication complex GINS protein PSF1 [Cucumis sativus] >KGN45289.1... [more]
Match NameE-valueIdentityDescription
A0A6J1CT732.87e-141100.00DNA replication complex GINS protein PSF1-like isoform X2 OS=Momordica charantia... [more]
A0A6J1CUP52.01e-13999.50DNA replication complex GINS protein PSF1-like isoform X1 OS=Momordica charantia... [more]
A0A6J1CFF57.59e-13797.98DNA replication complex GINS protein PSF1-like OS=Momordica charantia OX=3673 GN... [more]
A0A0A0K8U86.40e-12790.40Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433190 PE=3 S... [more]
A0A1S3CDY25.25e-12689.45probable DNA replication complex GINS protein PSF1 OS=Cucumis melo OX=3656 GN=LO... [more]
Match NameE-valueIdentityDescription
AT1G80190.16.5e-7668.00partner of SLD five 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..63
NoneNo IPR availableGENE3D1.20.58.1030coord: 1..134
e-value: 5.7E-40
score: 138.5
IPR021151GINS subunit, domain APFAMPF05916Sld5coord: 47..116
e-value: 1.3E-6
score: 28.8
IPR005339GINS complex, subunit Psf1PANTHERPTHR12914PARTNER OF SLD5coord: 1..195
IPR005339GINS complex, subunit Psf1CDDcd11710GINS_A_psf1coord: 3..136
e-value: 2.77367E-46
score: 147.016
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 1..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g0340.1MC09g0340.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902983 DNA strand elongation involved in mitotic DNA replication
biological_process GO:0006260 DNA replication
cellular_component GO:0000811 GINS complex