MC09g0307 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0307
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	thionin-like protein 2
Location	MC09: 2738399 .. 2738710 (-)
RNA-Seq Expression	MC09g0307
Synteny	MC09g0307

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTGGGGTTTAAGTACTGTAATGGTGTGGCTGGTGGTGGTGAGCTCCGTTATGACGACGGCGGAATCCACGTCCTTTCAAGAATGCTACGCCACCTGCTTCGTCATCTGCGCCATCACCCCCGGCGCCTCCTTCTCCGAATGCCCTCTCAAATGCCTGCAGGCCTGCATCATCCCCTCTTTCCCCATCGACGACGCCGCCGCCGCCGCCACCGCCACCGCTGCCGACCGCCGAACGCACAACCATTTCTTCTGCAAGCTCGGCTGCGCAGCTACCTTATGTACCAACTTCACCACCAACCATAACCCAGGT

mRNA sequence

AAGTGGGGTTTAAGTACTGTAATGGTGTGGCTGGTGGTGGTGAGCTCCGTTATGACGACGGCGGAATCCACGTCCTTTCAAGAATGCTACGCCACCTGCTTCGTCATCTGCGCCATCACCCCCGGCGCCTCCTTCTCCGAATGCCCTCTCAAATGCCTGCAGGCCTGCATCATCCCCTCTTTCCCCATCGACGACGCCGCCGCCGCCGCCACCGCCACCGCTGCCGACCGCCGAACGCACAACCATTTCTTCTGCAAGCTCGGCTGCGCAGCTACCTTATGTACCAACTTCACCACCAACCATAACCCAGGT

Coding sequence (CDS)

AAGTGGGGTTTAAGTACTGTAATGGTGTGGCTGGTGGTGGTGAGCTCCGTTATGACGACGGCGGAATCCACGTCCTTTCAAGAATGCTACGCCACCTGCTTCGTCATCTGCGCCATCACCCCCGGCGCCTCCTTCTCCGAATGCCCTCTCAAATGCCTGCAGGCCTGCATCATCCCCTCTTTCCCCATCGACGACGCCGCCGCCGCCGCCACCGCCACCGCTGCCGACCGCCGAACGCACAACCATTTCTTCTGCAAGCTCGGCTGCGCAGCTACCTTATGTACCAACTTCACCACCAACCATAACCCAGGT

Protein sequence

KWGLSTVMVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDDAAAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNPG

Homology

[Close]

BLAST of MC09g0307 vs. NCBI nr
Match: XP_022146010.1 (thionin-like protein 2 [Momordica charantia])

HSP 1 Score: 205 bits (522), Expect = 2.86e-66
Identity = 101/103 (98.06%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   KWGLSTVMVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPS 60
           KWGLSTVMVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPS
Sbjct: 7   KWGLSTVMVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPS 66

Query: 61  FPIDDAAAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNP 103
           FPIDDAAA  TATAADRRTHNHFFCKLGCAATLCTNFTTNHNP
Sbjct: 67  FPIDDAAA--TATAADRRTHNHFFCKLGCAATLCTNFTTNHNP 107

[Close]

BLAST of MC09g0307 vs. NCBI nr
Match: XP_011659556.1 (thionin-like protein 2 [Cucumis sativus] >KGN45343.1 hypothetical protein Csa_016713 [Cucumis sativus])

HSP 1 Score: 135 bits (339), Expect = 1.78e-38
Identity = 66/104 (63.46%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 1   KWGLSTVMVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPS 60
           KW L   M WL++ S  ++TA STSFQECYATCFVICAITPG +FS+CPL+CLQACI+PS
Sbjct: 8   KWAL---MAWLLLTS--LSTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIVPS 67

Query: 61  FPIDDAAAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNPG 104
           FPIDDA          ++  NHFFCKLGCAA+ CT F+T  NPG
Sbjct: 68  FPIDDADVVHR-----QQQQNHFFCKLGCAASSCTKFSTKQNPG 101

[Close]

BLAST of MC09g0307 vs. NCBI nr
Match: XP_008461039.1 (PREDICTED: thionin-like protein 2 [Cucumis melo])

HSP 1 Score: 133 bits (334), Expect = 1.06e-37
Identity = 65/104 (62.50%), Postives = 77/104 (74.04%), Query Frame = 0


Query: 1   KWGLSTVMVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPS 60
           KW L   M WL++ S  ++TA STSFQECYATCFVICAITPG +FS+CPL+CLQACI+PS
Sbjct: 8   KWAL---MAWLLLTS--LSTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIVPS 67

Query: 61  FPIDDAAAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNPG 104
           FPIDD           ++  NHFFCKLGCAA+ CT F+T  NPG
Sbjct: 68  FPIDDDDVVHR-----QKQQNHFFCKLGCAASSCTKFSTKQNPG 101

[Close]

BLAST of MC09g0307 vs. NCBI nr
Match: XP_022953260.1 (thionin-like protein 2 [Cucurbita moschata] >XP_022953261.1 thionin-like protein 2 [Cucurbita moschata])

HSP 1 Score: 127 bits (320), Expect = 1.43e-35
Identity = 64/96 (66.67%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 8   MVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDDAA 67
           M WLV+ S  +TTA STSFQECYATCFVICAITPG +FS+CPL+CLQACIIPSFPI +AA
Sbjct: 11  MAWLVLSS--LTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAA 70

Query: 68  AAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNP 103
           A        R+  N FFC+LGCAA+ CT F+T+ NP
Sbjct: 71  ADDDV---HRQQKNQFFCELGCAASSCTKFSTHQNP 101

[Close]

BLAST of MC09g0307 vs. NCBI nr
Match: KAG6575558.1 (hypothetical protein SDJN03_26197, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129 bits (324), Expect = 3.12e-35
Identity = 65/97 (67.01%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 8   MVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDDAA 67
           M WLV+ S  +TTA STSFQECYATCFVICAITPG +FS+CPL+CLQACIIPSFPI +AA
Sbjct: 11  MAWLVLSS--LTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAA 70

Query: 68  AAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNPG 104
           A        R+  N FFC+LGCAA+ CT F+T+ NPG
Sbjct: 71  ADDDF---HRQQKNQFFCELGCAASSCTKFSTHQNPG 102

[Close]

BLAST of MC09g0307 vs. ExPASy TrEMBL
Match: A0A6J1CW29 (thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111015320 PE=4 SV=1)

HSP 1 Score: 205 bits (522), Expect = 1.39e-66
Identity = 101/103 (98.06%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   KWGLSTVMVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPS 60
           KWGLSTVMVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPS
Sbjct: 7   KWGLSTVMVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPS 66

Query: 61  FPIDDAAAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNP 103
           FPIDDAAA  TATAADRRTHNHFFCKLGCAATLCTNFTTNHNP
Sbjct: 67  FPIDDAAA--TATAADRRTHNHFFCKLGCAATLCTNFTTNHNP 107

[Close]

BLAST of MC09g0307 vs. ExPASy TrEMBL
Match: A0A0A0K781 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G441625 PE=4 SV=1)

HSP 1 Score: 135 bits (339), Expect = 8.60e-39
Identity = 66/104 (63.46%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 1   KWGLSTVMVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPS 60
           KW L   M WL++ S  ++TA STSFQECYATCFVICAITPG +FS+CPL+CLQACI+PS
Sbjct: 8   KWAL---MAWLLLTS--LSTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIVPS 67

Query: 61  FPIDDAAAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNPG 104
           FPIDDA          ++  NHFFCKLGCAA+ CT F+T  NPG
Sbjct: 68  FPIDDADVVHR-----QQQQNHFFCKLGCAASSCTKFSTKQNPG 101

[Close]

BLAST of MC09g0307 vs. ExPASy TrEMBL
Match: A0A1S3CDU4 (thionin-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103499745 PE=4 SV=1)

HSP 1 Score: 133 bits (334), Expect = 5.11e-38
Identity = 65/104 (62.50%), Postives = 77/104 (74.04%), Query Frame = 0


Query: 1   KWGLSTVMVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPS 60
           KW L   M WL++ S  ++TA STSFQECYATCFVICAITPG +FS+CPL+CLQACI+PS
Sbjct: 8   KWAL---MAWLLLTS--LSTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIVPS 67

Query: 61  FPIDDAAAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNPG 104
           FPIDD           ++  NHFFCKLGCAA+ CT F+T  NPG
Sbjct: 68  FPIDDDDVVHR-----QKQQNHFFCKLGCAASSCTKFSTKQNPG 101

[Close]

BLAST of MC09g0307 vs. ExPASy TrEMBL
Match: A0A6J1GMH5 (thionin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111455863 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 6.90e-36
Identity = 64/96 (66.67%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 8   MVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDDAA 67
           M WLV+ S  +TTA STSFQECYATCFVICAITPG +FS+CPL+CLQACIIPSFPI +AA
Sbjct: 11  MAWLVLSS--LTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAA 70

Query: 68  AAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNP 103
           A        R+  N FFC+LGCAA+ CT F+T+ NP
Sbjct: 71  ADDDV---HRQQKNQFFCELGCAASSCTKFSTHQNP 101

[Close]

BLAST of MC09g0307 vs. ExPASy TrEMBL
Match: A0A6J1JZ84 (thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111488748 PE=4 SV=1)

HSP 1 Score: 126 bits (316), Expect = 2.72e-35
Identity = 63/96 (65.62%), Postives = 74/96 (77.08%), Query Frame = 0


Query: 8   MVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDDAA 67
           M WLV+ S  +TTA STSFQECYATCF+ICAITPG +FS+CPL+CLQACIIPSFPI +AA
Sbjct: 11  MAWLVLSS--LTTANSTSFQECYATCFLICAITPGVAFSDCPLRCLQACIIPSFPIHNAA 70

Query: 68  AAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNP 103
           A        R+  N FFC+LGCAA+ CT F+T  NP
Sbjct: 71  ADDV----HRQQKNQFFCELGCAASSCTKFSTQKNP 100

The following BLAST results are available for this feature:

BLAST of MC09g0307 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g0307 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146010.1	2.86e-66	98.06	thionin-like protein 2 [Momordica charantia]	[more]
XP_011659556.1	1.78e-38	63.46	thionin-like protein 2 [Cucumis sativus] >KGN45343.1 hypothetical protein Csa_01...	[more]
XP_008461039.1	1.06e-37	62.50	PREDICTED: thionin-like protein 2 [Cucumis melo]	[more]
XP_022953260.1	1.43e-35	66.67	thionin-like protein 2 [Cucurbita moschata] >XP_022953261.1 thionin-like protein...	[more]
KAG6575558.1	3.12e-35	67.01	hypothetical protein SDJN03_26197, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC09g0307 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CW29	1.39e-66	98.06	thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111015320 PE=4 SV=1	[more]
A0A0A0K781	8.60e-39	63.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G441625 PE=4 SV=1	[more]
A0A1S3CDU4	5.11e-38	62.50	thionin-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103499745 PE=4 SV=1	[more]
A0A6J1GMH5	6.90e-36	66.67	thionin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111455863 PE=4 SV=1	[more]
A0A6J1JZ84	2.72e-35	65.63	thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111488748 PE=4 SV=1	[more]

BLAST of MC09g0307 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038975	Thionin-like protein	PANTHER	PTHR36312	THIONIN-LIKE PROTEIN 1	coord: 6..103
None	No IPR available	PANTHER	PTHR36312:SF1	THIONIN-LIKE PROTEIN 1	coord: 6..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g0307.1	MC09g0307.1	mRNA