MC09g0052 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g0052
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	glycine-rich protein 23-like
Location	MC09: 470903 .. 471310 (-)
RNA-Seq Expression	MC09g0052
Synteny	MC09g0052

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAGTTTTCATGACTTTGCTTTTGGCTCTGGTGGCCACTCACGCTATGGCTAGGCCTACGCCTACGCCGACAGACGCCACCTTCAAGGACCAAAAGAACTTCTTCACCTATGGTGGTCTGGGTGGCTACTCTGGCATCGGCAACAATGGCCTCCCCTTCGGCGGGGTCGGTGGTGCAGTTGGGGGCGGTGGCCTCGGTGGCGGCCTTGGAGGTGGACTCGGTGGCGGTACTGGGATCGGCGGAGGTCTAGGCGGCTTGGGAGGCACGGGAGGCGGCTTGGGCGGTAACGTTGGTGGCATCGGAGGAACCATCGGAGGCGGAGGTGCCAGTGGTGGTCTCGGTGGCGGTCTTGGCGGCGGACTTGGCGGCGGACTTGGTGGTGGCTCTGCTCTTCCTTATCCT

mRNA sequence

ATGGCGAAAGTTTTCATGACTTTGCTTTTGGCTCTGGTGGCCACTCACGCTATGGCTAGGCCTACGCCTACGCCGACAGACGCCACCTTCAAGGACCAAAAGAACTTCTTCACCTATGGTGGTCTGGGTGGCTACTCTGGCATCGGCAACAATGGCCTCCCCTTCGGCGGGGTCGGTGGTGCAGTTGGGGGCGGTGGCCTCGGTGGCGGCCTTGGAGGTGGACTCGGTGGCGGTACTGGGATCGGCGGAGGTCTAGGCGGCTTGGGAGGCACGGGAGGCGGCTTGGGCGGTAACGTTGGTGGCATCGGAGGAACCATCGGAGGCGGAGGTGCCAGTGGTGGTCTCGGTGGCGGTCTTGGCGGCGGACTTGGCGGCGGACTTGGTGGTGGCTCTGCTCTTCCTTATCCT

Coding sequence (CDS)

ATGGCGAAAGTTTTCATGACTTTGCTTTTGGCTCTGGTGGCCACTCACGCTATGGCTAGGCCTACGCCTACGCCGACAGACGCCACCTTCAAGGACCAAAAGAACTTCTTCACCTATGGTGGTCTGGGTGGCTACTCTGGCATCGGCAACAATGGCCTCCCCTTCGGCGGGGTCGGTGGTGCAGTTGGGGGCGGTGGCCTCGGTGGCGGCCTTGGAGGTGGACTCGGTGGCGGTACTGGGATCGGCGGAGGTCTAGGCGGCTTGGGAGGCACGGGAGGCGGCTTGGGCGGTAACGTTGGTGGCATCGGAGGAACCATCGGAGGCGGAGGTGCCAGTGGTGGTCTCGGTGGCGGTCTTGGCGGCGGACTTGGCGGCGGACTTGGTGGTGGCTCTGCTCTTCCTTATCCT

Protein sequence

MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGGAVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLGGGLGGGLGGGLGGGSALPYP

Homology

[Close]

BLAST of MC09g0052 vs. NCBI nr
Match: XP_022143624.1 (glycine-rich protein 23-like [Momordica charantia])

HSP 1 Score: 195 bits (495), Expect = 1.67e-61
Identity = 132/136 (97.06%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG
Sbjct: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60

Query: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLGGGLG 120
           AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLGGGLG
Sbjct: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLGGGLG 120

Query: 121 GGLGGGLGGGSALPYP 136
           GGLGGG    SALPYP
Sbjct: 121 GGLGGG----SALPYP 132

[Close]

BLAST of MC09g0052 vs. NCBI nr
Match: KAA0050560.1 (acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 145 bits (366), Expect = 7.17e-42
Identity = 111/138 (80.43%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAK+FM LLLALVATHA+ARPTP   D TF DQKNF TYGG+GGYSGIG+NGLPFGGVGG
Sbjct: 1   MAKLFMALLLALVATHALARPTPK--DDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGG 60

Query: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGG--GGASGGLGGG 120
           A+GGGGLGGGLGGGLGG TGIGGGLGGLGGTGGGLGG    IGGT GG  GG  GGLGGG
Sbjct: 61  AIGGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGG----IGGTTGGLGGGLGGGLGGG 120

Query: 121 LGGGLGGGLGGGSALPYP 136
           LGGGLGGG+GG S + YP
Sbjct: 121 LGGGLGGGVGGASGVTYP 132

[Close]

BLAST of MC09g0052 vs. NCBI nr
Match: XP_008462124.1 (PREDICTED: acanthoscurrin-1-like [Cucumis melo])

HSP 1 Score: 138 bits (347), Expect = 4.75e-39
Identity = 107/133 (80.45%), Postives = 113/133 (84.96%), Query Frame = 0


Query: 6   MTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGGAVGGG 65
           M LLLALVATHA+ARPTP   D TF DQKNF TYGG+GGYSGIG+NGLPFGGVGGA+GGG
Sbjct: 1   MALLLALVATHALARPTPK--DDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGG 60

Query: 66  GLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGG--GGASGGLGGGLGGGL 125
           GLGGGLGGGLGG TGIGGGLGGLGGTGGGLGG    IGGT GG  GG  GGLGGGLGGGL
Sbjct: 61  GLGGGLGGGLGGATGIGGGLGGLGGTGGGLGG----IGGTTGGLGGGLGGGLGGGLGGGL 120

Query: 126 GGGLGGGSALPYP 136
           GGG+GG S + YP
Sbjct: 121 GGGVGGASGVTYP 127

[Close]

BLAST of MC09g0052 vs. NCBI nr
Match: XP_011659762.1 (glycine-rich protein 5 [Cucumis sativus])

HSP 1 Score: 138 bits (347), Expect = 5.53e-39
Identity = 108/140 (77.14%), Postives = 115/140 (82.14%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAK+FM LLLALVATHA+ARPTP   D TF DQKNF TYGG+GGYSGIGNNGLPFGG+GG
Sbjct: 1   MAKLFMALLLALVATHALARPTPK--DDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGG 60

Query: 61  AVGGGGLGGGLGGGLGGG----TGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLG 120
           A+GGGGLGGGLGGGLGGG    TGIGGGLGGLGG GGG GG    IGGT GG    GGLG
Sbjct: 61  AIGGGGLGGGLGGGLGGGLGGGTGIGGGLGGLGGPGGGFGG----IGGTTGG--LGGGLG 120

Query: 121 GGLGGGLGGGLGGGSALPYP 136
           GGLGGGLGGG+GG S + YP
Sbjct: 121 GGLGGGLGGGVGGASGVTYP 132

[Close]

BLAST of MC09g0052 vs. NCBI nr
Match: KAE8646236.1 (hypothetical protein Csa_016187 [Cucumis sativus])

HSP 1 Score: 138 bits (347), Expect = 1.68e-38
Identity = 108/140 (77.14%), Postives = 115/140 (82.14%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAK+FM LLLALVATHA+ARPTP   D TF DQKNF TYGG+GGYSGIGNNGLPFGG+GG
Sbjct: 38  MAKLFMALLLALVATHALARPTPK--DDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGG 97

Query: 61  AVGGGGLGGGLGGGLGGG----TGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLG 120
           A+GGGGLGGGLGGGLGGG    TGIGGGLGGLGG GGG GG    IGGT GG    GGLG
Sbjct: 98  AIGGGGLGGGLGGGLGGGLGGGTGIGGGLGGLGGPGGGFGG----IGGTTGG--LGGGLG 157

Query: 121 GGLGGGLGGGLGGGSALPYP 136
           GGLGGGLGGG+GG S + YP
Sbjct: 158 GGLGGGLGGGVGGASGVTYP 169

[Close]

BLAST of MC09g0052 vs. ExPASy TrEMBL
Match: A0A6J1CPV7 (glycine-rich protein 23-like OS=Momordica charantia OX=3673 GN=LOC111013480 PE=4 SV=1)

HSP 1 Score: 195 bits (495), Expect = 8.08e-62
Identity = 132/136 (97.06%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG
Sbjct: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60

Query: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLGGGLG 120
           AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLGGGLG
Sbjct: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLGGGLG 120

Query: 121 GGLGGGLGGGSALPYP 136
           GGLGGG    SALPYP
Sbjct: 121 GGLGGG----SALPYP 132

[Close]

BLAST of MC09g0052 vs. ExPASy TrEMBL
Match: A0A5A7U5T7 (Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00150 PE=4 SV=1)

HSP 1 Score: 145 bits (366), Expect = 3.47e-42
Identity = 111/138 (80.43%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAK+FM LLLALVATHA+ARPTP   D TF DQKNF TYGG+GGYSGIG+NGLPFGGVGG
Sbjct: 1   MAKLFMALLLALVATHALARPTPK--DDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGG 60

Query: 61  AVGGGGLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGG--GGASGGLGGG 120
           A+GGGGLGGGLGGGLGG TGIGGGLGGLGGTGGGLGG    IGGT GG  GG  GGLGGG
Sbjct: 61  AIGGGGLGGGLGGGLGGATGIGGGLGGLGGTGGGLGG----IGGTTGGLGGGLGGGLGGG 120

Query: 121 LGGGLGGGLGGGSALPYP 136
           LGGGLGGG+GG S + YP
Sbjct: 121 LGGGLGGGVGGASGVTYP 132

[Close]

BLAST of MC09g0052 vs. ExPASy TrEMBL
Match: A0A1S3CGR1 (acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1)

HSP 1 Score: 138 bits (347), Expect = 2.30e-39
Identity = 107/133 (80.45%), Postives = 113/133 (84.96%), Query Frame = 0


Query: 6   MTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGGAVGGG 65
           M LLLALVATHA+ARPTP   D TF DQKNF TYGG+GGYSGIG+NGLPFGGVGGA+GGG
Sbjct: 1   MALLLALVATHALARPTPK--DDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGG 60

Query: 66  GLGGGLGGGLGGGTGIGGGLGGLGGTGGGLGGNVGGIGGTIGG--GGASGGLGGGLGGGL 125
           GLGGGLGGGLGG TGIGGGLGGLGGTGGGLGG    IGGT GG  GG  GGLGGGLGGGL
Sbjct: 61  GLGGGLGGGLGGATGIGGGLGGLGGTGGGLGG----IGGTTGGLGGGLGGGLGGGLGGGL 120

Query: 126 GGGLGGGSALPYP 136
           GGG+GG S + YP
Sbjct: 121 GGGVGGASGVTYP 127

[Close]

BLAST of MC09g0052 vs. ExPASy TrEMBL
Match: A0A0A0K9U1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336450 PE=4 SV=1)

HSP 1 Score: 138 bits (347), Expect = 2.68e-39
Identity = 108/140 (77.14%), Postives = 115/140 (82.14%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAK+FM LLLALVATHA+ARPTP   D TF DQKNF TYGG+GGYSGIGNNGLPFGG+GG
Sbjct: 1   MAKLFMALLLALVATHALARPTPK--DDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGG 60

Query: 61  AVGGGGLGGGLGGGLGGG----TGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASGGLG 120
           A+GGGGLGGGLGGGLGGG    TGIGGGLGGLGG GGG GG    IGGT GG    GGLG
Sbjct: 61  AIGGGGLGGGLGGGLGGGLGGGTGIGGGLGGLGGPGGGFGG----IGGTTGG--LGGGLG 120

Query: 121 GGLGGGLGGGLGGGSALPYP 136
           GGLGGGLGGG+GG S + YP
Sbjct: 121 GGLGGGLGGGVGGASGVTYP 132

[Close]

BLAST of MC09g0052 vs. ExPASy TrEMBL
Match: A0A6J1KVV3 (acanthoscurrin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498068 PE=4 SV=1)

HSP 1 Score: 114 bits (286), Expect = 5.40e-30
Identity = 101/143 (70.63%), Postives = 114/143 (79.72%), Query Frame = 0


Query: 1   MAKVFMTLLLALVATHAMARPTPTPTDATFKDQKNFFTYGGLGGYSGIGNNGLPFGGVGG 60
           MAK+FM +LLAL+ATHA+ARPTP   DATF DQKNF TYGGLGGYSGIG+NGLPFGG+GG
Sbjct: 1   MAKLFMAMLLALLATHALARPTPK--DATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGG 60

Query: 61  AVGG---GGLGGGLGGGLGG----GTGIGGGLGGLGGTGGGLGGNVGGIGGTIGGGGASG 120
           AVGG   GG+GGG+GG LGG    G G+GGGLGG  G GGGLGG  GG+GGT+GGG   G
Sbjct: 61  AVGGTGPGGIGGGIGG-LGGFGGGGAGLGGGLGG--GLGGGLGG--GGLGGTMGGGNLGG 120

Query: 121 GLGGGLGGGLGGGLGGGSALPYP 136
           GLGG +GGGLGGG+GGG     P
Sbjct: 121 GLGGTVGGGLGGGVGGGGGSGLP 136

The following BLAST results are available for this feature:

BLAST of MC09g0052 vs.


Match Name	E-value	Identity	Description

BLAST of MC09g0052 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143624.1	1.67e-61	97.06	glycine-rich protein 23-like [Momordica charantia]	[more]
KAA0050560.1	7.17e-42	80.43	acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-li...	[more]
XP_008462124.1	4.75e-39	80.45	PREDICTED: acanthoscurrin-1-like [Cucumis melo]	[more]
XP_011659762.1	5.53e-39	77.14	glycine-rich protein 5 [Cucumis sativus]	[more]
KAE8646236.1	1.68e-38	77.14	hypothetical protein Csa_016187 [Cucumis sativus]	[more]

BLAST of MC09g0052 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPV7	8.08e-62	97.06	glycine-rich protein 23-like OS=Momordica charantia OX=3673 GN=LOC111013480 PE=4...	[more]
A0A5A7U5T7	3.47e-42	80.43	Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94...	[more]
A0A1S3CGR1	2.30e-39	80.45	acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1	[more]
A0A0A0K9U1	2.68e-39	77.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336450 PE=4 SV=1	[more]
A0A6J1KVV3	5.40e-30	70.63	acanthoscurrin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498068 PE=4 SV=1	[more]

BLAST of MC09g0052 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34463	GLYCINE-RICH PROTEIN	coord: 1..126
None	No IPR available	PANTHER	PTHR34463:SF11	GLYCINE-RICH PROTEIN	coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g0052.1	MC09g0052.1	mRNA