MC08g_new0604 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g_new0604
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 31746518 .. 31749943 (-)
RNA-Seq ExpressionMC08g_new0604
SyntenyMC08g_new0604
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCCAACTGTGTACAAATAAGAAAAAACTGAAAAAAAAAAAGATGGTAACTTAAGATGGCATATTTTATTTATTAAAAAAAAAATCCTCATTCTACTTGTATTCTGCTCAGAGCTCATCTCCTTGAAAATCAGTTCAACTTCATGTAGTCAATCTTTCCATCCAAACCTGCTTTATCAATCTTCATATCGAGTTGTTCTGTTGATTTTTCCTCAACTCTGAGCTCTGAAAAAGCTATGTCCACTTCGCGATTCCTTCTCGTTCTCCATCTTCAGCAAATTAACCACTCGGAGGCGTCGATTTCAAATGATGCTCCACGAATCCCTACTTCGCCTGCTACAATTTCTCCCTCCTCTAATGCTAGGGCTTCGGCGATGTCTGCATCCAGGTACGCATAGCGACATTTATGCTTGGATTTGTATGCATAGCGACAGACGATTTGATCTCGTATTTTTACATGGATTGGAATTCCTGTTTATTTATTTATTTCTTAGTACCTCGTGGTTGCCTCTGCACTTCTGTGTAATTTTCCAAATAATTTTCATAGTTCTTCAAATCTGTAGTTTAGTTTGGCTAATCGGAATAGTAGACAGGAGATTCGTTTCAGGCCTTTTTTACTCACTAGGAGTAGGTTTATTCCATTGAAGAGGAATATGTCATATTTTTTAATCTCCTTCTTTAAATCATTGGTATAGCTACAGAATCCTCTTCCAGATTCGTTTTGAAAGGAGCTTTCATTCCGGGAGAAATTATTAAAAAAAAAAAAATTAGAGTTTTGTTTACAGTTTTCTTTTTATTTCGAAAAACATAATCATTTTATTCTAGTATTATAAGAAATTATAAAAACTCAGATAAAGAAGAAGAATAGAAGCCTAATAAAGTTAAAATGATGTAATTTGAAGTATTAATTCTTTGAAAAAAAAAATAATAAAAAATAAAAATTGAAAAAGTAAAAAAGCAAAAACGAAATAAGAATGTGCTGCAATTTTATCTGACATGTGAAACTGAAACAAGTACATGTAATCTTGAATTTGTCAAGACTTTCTTCAAACTTTCGTTTGGAATACTAAAAAAAAATACAAAAAATCACTCCATATATCAGAGCCAGGTTTCGATCCTGGGACCTGTGGTTACGGCCCACCACGCTTCCGCCACTCTGATTTGAATATTATATAATTAATTTTTTATGTATTAATAAATTAAAAAAAAATGAGAGAGAAATAATTGATGGTCTCGATCTATGATCATAGTTTTCAGGATTTCATTTCAAATCTGTTCTCCTGCTTCCTTTTCAGTCGTTCAGTTTGTTGTATTGGCCTTCTTCTCTTTCTCATTTGTGACTTGTGACTCCATTGCTGTGTTTGTGCTATGTTCTATCATTGTTACTTTTTTATACTTTCAGATGTTCGTGTTATAGCTGGTGATAGGAACCAAAACAAAACAATTTAATTTGTATATGTATCAGTGTTAAGGTATTTATAAAAGAATAAATTTATCATAATCCATCCGCCTAAGCTTTTGAGTTTATTCTACTAAAAAACTTTTGGATTTATTGGTGATTTAACATAGTGCCAGAGAGTCCAATAATTTCATTTCCTTCCCATTTCATATTTATTACCACTTGTTGGTCCTTGTGCAAATTTCTAAGCCGGCCACTAATGAAACTAATGAAGGAAGTGTTAAGGTATTTATAAAAGATTAAATTTATTGATTGATGATTTAACAATAAACACATATATTTGAGCTTGCAAGCTCCTCTGCCTAAAACCCCTCCCAACTTACTCTATTTGTAACCACTATATTAACAAACTCCTTAATTAATGGTTAATATGCTGATATAATATCCTAATAATATTTCTAACGTTTTCCTAGAAGCTGCTTGCTTGTTCCTCTACTCGTTAAGTTAATTGCAGTTTTATGGTGTGTGTGTTAGCAGGCCAGAAGAGTGGCAGAGTTACTATCCTGAATTGCATTAGAAGAACAGTCTGTCTTCATAGTCCTCTGCCTTATATACATTTCTATTGTACCATTGAAGAGATTAAGTCTCCTTAGACTTCCCAAACTTGTACATTTATGGAAGACAAACTTGCAAGCAACCCATCATTCCTCAACTTAGAAGTCCTCAAGGTAGAAGAATGCGGTCGATTAAATCTTTTATTTCCGTCGTCATTCTCCCTCCACAACTTGAAGTCTATCAGAATAGTTCCCTGTCATGGATTGGTTCACTTGATGAATTCATAAGTAGCTAAAACCCTGGTGAAACTGCAAGAGATGCGTTTATCTTCTTGCAAAAAGATTCTACCATAATTGCAAAAGGAGAAGGAGGTGAAGAAGAGGATGAAATCGTTTTCAGCCAATTGAAGATTTTGGAGCTCTTCAACTTACCCAATTTATCAACCTTTCATTTTGGGAAAAGCAGTTTTAAGTTGCCGTGCCTGGGAAAAGTGGTTGCGAAGAAATGCCCTGAAATGAAAGCATCTTCTGGTGGAGTTGTGAGCACGCCTGAACATTACTGGTATGTCAAATGTGGATCAGACGAGGGATTTTGGACAAGCAACGTCAATGCCACCATCAACCGGCTATGGTATGATGGCCATGACACTAGCCTTCAGAGTTTGTTTATTGAACAGGTATGTGTCTATTGATTCTACAAATTTTTATTGCATGATTTTACTTCTATGCATAAATCATTTGTATGATTTTACTTAGGGGGGTGAGAAACTGGTTTGGTCGGGTGGGATCGGTTTTCATGTAAAAGGAGAAAACCGACTCGGTTTGATTTAGTGGTGAAGAAACCGAACTGATTCAGGTCGCTTTATGGCTGGTTTTTCTTTTACTTATGTTGAATTGAATTGGAAAACTAAGTGGTATCACGGGATATAGTCCTAATAGATATTTTTTTTTTCAAATGTACAAAAATCAACTTTTAATATCAGAGCCAAGTTTCGATCCTGGGACCTGTGGGTTATGGGCCCACCACGCTTCCGCTGCGCCACTCTGATCTGAATATTACATTTTTATTATTTTACTTTGTCTAACAAACCTAAACAAAATTAAAAAAAAAAAGAAATAATTTATGGTCTGGATCTATGATCACAGGTTATAGGATTTCAATTTAGATCTGTTCTGCGTTCCTTTTCAGTCGTCCAGCTTGTTCTATTGGCCTTCTTCTCTTCCTCATTTTTGACTTGTGACTCCATTGCTGCGTTTGTGCTACTATCCTTCTTACTTCTTATGGTGCATTGGCTGCGTGTTCAAACTGATTTTTCTTTTTTTGTTTTCTTTACTCAAGCAAACGATCTTTTTATAGTACTTTCATCTGTGCATGTTCATGTTATAGTTGGTAATAGGAACAAAACAAAACAATTTTATTTTGTAATTTGTATATATATCTATGTTAAGGAATCTATAGAAGATTAAATTATCC

mRNA sequence

ATGAAAGCATCTTCTGGTGGAGTTGTGAGCACGCCTGAACATTACTGGTATGTCAAATGTGGATCAGACGAGGGATTTTGGACAAGCAACGTCAATGCCACCATCAACCGGCTATGGTATGATGGCCATGACACTAGCCTTCAGAGTTTGTTTATTGAACAGGTATGTGTCTATTGA

Coding sequence (CDS)

ATGAAAGCATCTTCTGGTGGAGTTGTGAGCACGCCTGAACATTACTGGTATGTCAAATGTGGATCAGACGAGGGATTTTGGACAAGCAACGTCAATGCCACCATCAACCGGCTATGGTATGATGGCCATGACACTAGCCTTCAGAGTTTGTTTATTGAACAGGTATGTGTCTATTGA

Protein sequence

MKASSGGVVSTPEHYWYVKCGSDEGFWTSNVNATINRLWYDGHDTSLQSLFIEQVCVY
Homology
[Close]
BLAST of MC08g_new0604 vs. NCBI nr
Match: XP_022999581.1 (probable disease resistance protein At4g27220 [Cucurbita maxima])

HSP 1 Score: 89.4 bits (220), Expect = 6.43e-19
Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0 

Query: 1    MKASSGGVVSTPEHYWYVKCGSDEGFWTSNVNATINRLWYDGHDTSLQSLFIEQV 55
            MKA S GVV+TPEH WY K GSDEGFWTSNVNATIN+LW +  DTSLQS F+E+V
Sbjct: 1347 MKAFSCGVVTTPEHCWYAKWGSDEGFWTSNVNATINQLWDNDLDTSLQSFFVEEV 1401

[Close]
BLAST of MC08g_new0604 vs. ExPASy TrEMBL
Match: A0A6J1KDH0 (probable disease resistance protein At4g27220 OS=Cucurbita maxima OX=3661 GN=LOC111493908 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.11e-19
Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0 

Query: 1    MKASSGGVVSTPEHYWYVKCGSDEGFWTSNVNATINRLWYDGHDTSLQSLFIEQV 55
            MKA S GVV+TPEH WY K GSDEGFWTSNVNATIN+LW +  DTSLQS F+E+V
Sbjct: 1347 MKAFSCGVVTTPEHCWYAKWGSDEGFWTSNVNATINQLWDNDLDTSLQSFFVEEV 1401

The following BLAST results are available for this feature:
BLAST of MC08g_new0604 vs.
Match NameE-valueIdentityDescription
BLAST of MC08g_new0604 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022999581.16.43e-1974.55probable disease resistance protein At4g27220 [Cucurbita maxima][more]
BLAST of MC08g_new0604 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KDH03.11e-1974.55probable disease resistance protein At4g27220 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
BLAST of MC08g_new0604 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g_new0604.1MC08g_new0604.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0043531 ADP binding