MC08g_new0580 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g_new0580
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 30888054 .. 30888347 (+)
RNA-Seq ExpressionMC08g_new0580
SyntenyMC08g_new0580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTTTAATCATGGAATTGAAGAGAAAAATGTTCGGATTTTGGGATTGGGAAAAGACGCGAATCGCATATGGCATCTTGTCGAGAGCCCCACAAATGGAGATGAAATGGGCAAGAATTTGATTGGATTGGTGAAGGCCATGGCGGAGGAAATGGGCGTGGGTTTGAGTGAGATGCATTCGAGTTTTGTGGCCATGAAGAAGACGCAGGATCTTCCGCTCAATCTCACGAAAATTTTTGTTCATCTTACAGAGAAAAATGGAATACGGCACACAGAGAAGAGGAAGAATTGA

mRNA sequence

ATGGGCTTTAATCATGGAATTGAAGAGAAAAATGTTCGGATTTTGGGATTGGGAAAAGACGCGAATCGCATATGGCATCTTGTCGAGAGCCCCACAAATGGAGATGAAATGGGCAAGAATTTGATTGGATTGGTGAAGGCCATGGCGGAGGAAATGGGCGTGGGTTTGAGTGAGATGCATTCGAGTTTTGTGGCCATGAAGAAGACGCAGGATCTTCCGCTCAATCTCACGAAAATTTTTGTTCATCTTACAGAGAAAAATGGAATACGGCACACAGAGAAGAGGAAGAATTGA

Coding sequence (CDS)

ATGGGCTTTAATCATGGAATTGAAGAGAAAAATGTTCGGATTTTGGGATTGGGAAAAGACGCGAATCGCATATGGCATCTTGTCGAGAGCCCCACAAATGGAGATGAAATGGGCAAGAATTTGATTGGATTGGTGAAGGCCATGGCGGAGGAAATGGGCGTGGGTTTGAGTGAGATGCATTCGAGTTTTGTGGCCATGAAGAAGACGCAGGATCTTCCGCTCAATCTCACGAAAATTTTTGTTCATCTTACAGAGAAAAATGGAATACGGCACACAGAGAAGAGGAAGAATTGA

Protein sequence

MGFNHGIEEKNVRILGLGKDANRIWHLVESPTNGDEMGKNLIGLVKAMAEEMGVGLSEMHSSFVAMKKTQDLPLNLTKIFVHLTEKNGIRHTEKRKN
Homology
BLAST of MC08g_new0580 vs. NCBI nr
Match: KAG6586228.1 (hypothetical protein SDJN03_18961, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 101 bits (252), Expect = 2.71e-25
Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = 0

Query: 1  MGFNHGIEEKNVRILGLGKDANRIWHLVESPTNGDEMGKNLIGLVKAMAEEMGVGLSEMH 60
          MGF+HGIE++NV ILGLGKDA  I + V S  NGDEMG++L+GLVK M EE+GV LSEM 
Sbjct: 1  MGFDHGIEKENVGILGLGKDAIGIGNFVGSSANGDEMGEDLVGLVKVMTEEVGVDLSEMG 60

Query: 61 SSFVAMKKTQDLPLNLTKIFVHLTEKNGIRHTEKRK 96
            FVA K+ +D PL++  +  H+ E   +R+TE+R+
Sbjct: 61 WGFVAGKEAEDSPLDVPVVLAHVME--IVRYTERRR 94

BLAST of MC08g_new0580 vs. NCBI nr
Match: PNX77350.1 (hypothetical protein L195_g033314, partial [Trifolium pratense])

HSP 1 Score: 72.0 bits (175), Expect = 3.48e-14
Identity = 35/76 (46.05%), Postives = 53/76 (69.74%), Query Frame = 0

Query: 1  MGFNHGIEEKNVRILGLGKDANRIWHLVESPTNGDEMGKNLIGLVKAMAEEMGVGLSEMH 60
          MGF+ G+EEKNV ++G+ ++   +  L++   +GDEMG+NL+GLV+AMAEEMGV L E+ 
Sbjct: 1  MGFDDGVEEKNVGVMGMVENECGVRDLLKRGADGDEMGENLVGLVEAMAEEMGVDLWELS 60

Query: 61 SSFVAMKKTQDLPLNL 76
            F  +KK ++    L
Sbjct: 61 FGFGVVKKMENFAFYL 76

BLAST of MC08g_new0580 vs. NCBI nr
Match: GAU21522.1 (hypothetical protein TSUD_34850 [Trifolium subterraneum])

HSP 1 Score: 66.6 bits (161), Expect = 4.74e-12
Identity = 32/76 (42.11%), Postives = 52/76 (68.42%), Query Frame = 0

Query: 1  MGFNHGIEEKNVRILGLGKDANRIWHLVESPTNGDEMGKNLIGLVKAMAEEMGVGLSEMH 60
          M F++G+E+KNV ++G+ +D   +  L++   +GDEMG++L+GLV+AMAEEM V L E+ 
Sbjct: 1  MSFDNGVEQKNVGVIGMVEDECGVRDLMKRGADGDEMGEDLVGLVEAMAEEMSVDLWELS 60

Query: 61 SSFVAMKKTQDLPLNL 76
            F  +KK ++    L
Sbjct: 61 FGFGVVKKMKNFAFYL 76

BLAST of MC08g_new0580 vs. NCBI nr
Match: RXI06115.1 (hypothetical protein DVH24_018157 [Malus domestica])

HSP 1 Score: 57.8 bits (138), Expect = 2.90e-07
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0

Query: 31  PTNGDEMGKNLIGLVKAMAEEMGVGLSEMHSSFVAMKKTQDLPLNLTKIFVH 82
           P   DE+G++LI L KAMAEE+GV L+EM S FVAM++ +D PL LT    H
Sbjct: 202 PIISDEVGEDLIDLAKAMAEEVGVDLAEMGSGFVAMEEAEDSPLRLTACSAH 253

BLAST of MC08g_new0580 vs. ExPASy TrEMBL
Match: A0A2K3LFP3 (Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g033314 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.68e-14
Identity = 35/76 (46.05%), Postives = 53/76 (69.74%), Query Frame = 0

Query: 1  MGFNHGIEEKNVRILGLGKDANRIWHLVESPTNGDEMGKNLIGLVKAMAEEMGVGLSEMH 60
          MGF+ G+EEKNV ++G+ ++   +  L++   +GDEMG+NL+GLV+AMAEEMGV L E+ 
Sbjct: 1  MGFDDGVEEKNVGVMGMVENECGVRDLLKRGADGDEMGENLVGLVEAMAEEMGVDLWELS 60

Query: 61 SSFVAMKKTQDLPLNL 76
            F  +KK ++    L
Sbjct: 61 FGFGVVKKMENFAFYL 76

BLAST of MC08g_new0580 vs. ExPASy TrEMBL
Match: A0A2Z6M7Y1 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_34850 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.30e-12
Identity = 32/76 (42.11%), Postives = 52/76 (68.42%), Query Frame = 0

Query: 1  MGFNHGIEEKNVRILGLGKDANRIWHLVESPTNGDEMGKNLIGLVKAMAEEMGVGLSEMH 60
          M F++G+E+KNV ++G+ +D   +  L++   +GDEMG++L+GLV+AMAEEM V L E+ 
Sbjct: 1  MSFDNGVEQKNVGVIGMVEDECGVRDLMKRGADGDEMGEDLVGLVEAMAEEMSVDLWELS 60

Query: 61 SSFVAMKKTQDLPLNL 76
            F  +KK ++    L
Sbjct: 61 FGFGVVKKMKNFAFYL 76

BLAST of MC08g_new0580 vs. ExPASy TrEMBL
Match: A0A498KK20 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_018157 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.40e-07
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0

Query: 31  PTNGDEMGKNLIGLVKAMAEEMGVGLSEMHSSFVAMKKTQDLPLNLTKIFVH 82
           P   DE+G++LI L KAMAEE+GV L+EM S FVAM++ +D PL LT    H
Sbjct: 202 PIISDEVGEDLIDLAKAMAEEVGVDLAEMGSGFVAMEEAEDSPLRLTACSAH 253

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6586228.12.71e-2555.21hypothetical protein SDJN03_18961, partial [Cucurbita argyrosperma subsp. sorori... [more]
PNX77350.13.48e-1446.05hypothetical protein L195_g033314, partial [Trifolium pratense][more]
GAU21522.14.74e-1242.11hypothetical protein TSUD_34850 [Trifolium subterraneum][more]
RXI06115.12.90e-0755.77hypothetical protein DVH24_018157 [Malus domestica][more]
Match NameE-valueIdentityDescription
A0A2K3LFP31.68e-1446.05Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g03331... [more]
A0A2Z6M7Y12.30e-1242.11Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_34850 PE=4 SV=... [more]
A0A498KK201.40e-0755.77Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_018157 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g_new0580.1MC08g_new0580.1mRNA