MC08g_new0547 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g_new0547
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 29464433 .. 29465339 (-)
RNA-Seq ExpressionMC08g_new0547
SyntenyMC08g_new0547
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTACTAAACAAATTAGTAATCAAAACTTAAGTGGAAGAAGCCAGGAGCCTTCCCTCTTGTTCTGAGTTGATTCTTTACAGCCACATACATATTTCAGAAAAATTACATCTGACATCCTATTTAGCTTATTCCAACAGATACAAAGAATATTACAACCACATAATCTTTTACCTCACCCAAAACCGAACTCATCGTTGGTATCCCATGGCTACTACAGGTATTCTAACCTTGTGTCCCCTACTGCCCTTCATTAGAACCTCGCCGAAACTGTATGTTCCTGTCAGTGATCGAGCTGTGAGAGTTACTGTAAATTTTCTGGAGGAACCAGATCGTAAAGTCATTGCTGGAGGATCTGTTTCTATGGCAACGGCAGGGTCCATTCTTGCTGTGAGCACATAGGTTTCTTCCTCAGCAACGTTCGTTACCGTGCGAGTAACAGTCTGAGTTCCCACAAGATGGGAGATGGTGATTGATGGGGAGTTGAGATTCCAAGGATGCCCCATGGTGAAGTTGCAAGGTGAGCTTGTATAGTTGTGTATCTCGTGAACGTTGATGCCTGCGGTCGTGCACAAAAATCCCAAGTAATCTTCATAACCTGAGATTTAGCGAGATCAGATGTGAGCGGGGGCCATCAGATACATATTTGAAAAACTACTCCTGAAGTGCTAGTAAATGATTTAGAAAAAATCTATGCCTGAATGCATATATGCAGACGTGGAAAAGACTTTTAACTATCATCGCCATCCTAGTAAAATTCAACGTTAAAAATAAAAAATAAAAAATCATGTCACTTTTTATGCTCATATGGACGTTTTCATTCTCATTATTCACGTCTTCTGAAATTTAATGGTTGATTTCATTTCTGAATAGGCTTGAGCTTCACCAAAAAAGGAAAGAAAGCTAGAC

mRNA sequence

ATGGCTACTACAGGTATTCTAACCTTGTGTCCCCTACTGCCCTTCATTAGAACCTCGCCGAAACTGTATGTTCCTGTCAGTGATCGAGCTGTGAGAGTTACTGTAAATTTTCTGGAGGAACCAGATCGTAAAGTCATTGCTGGAGGATCTGTTTCTATGGCAACGGCAGGGTCCATTCTTGCTGTGAGCACATAG

Coding sequence (CDS)

ATGGCTACTACAGGTATTCTAACCTTGTGTCCCCTACTGCCCTTCATTAGAACCTCGCCGAAACTGTATGTTCCTGTCAGTGATCGAGCTGTGAGAGTTACTGTAAATTTTCTGGAGGAACCAGATCGTAAAGTCATTGCTGGAGGATCTGTTTCTATGGCAACGGCAGGGTCCATTCTTGCTGTGAGCACATAG

Protein sequence

MATTGILTLCPLLPFIRTSPKLYVPVSDRAVRVTVNFLEEPDRKVIAGGSVSMATAGSILAVST
Homology
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BLAST of MC08g_new0547 vs. NCBI nr
Match: KAG1364512.1 (hypothetical protein COCNU_11G013390 [Cocos nucifera])

HSP 1 Score: 60.1 bits (144), Expect = 1.04e-08
Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 3   TTGILTLCPLLPFIRTSPKLYVPVSDRAVRVTVNFLEEPDRKVIAGGSVSMATAGSILAV 62
           ++GIL+LCPL P I   PKLY PV D A+R+TV     PD+  IAGG  S A +G IL V
Sbjct: 181 SSGILSLCPLSPVIGILPKLYPPVPDLALRLTVISCGAPDKTAIAGGLASNAISGDILGV 240

Query: 63  ST 64
            T
Sbjct: 241 MT 242

The following BLAST results are available for this feature:
BLAST of MC08g_new0547 vs.
Match NameE-valueIdentityDescription
BLAST of MC08g_new0547 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG1364512.11.04e-0853.23hypothetical protein COCNU_11G013390 [Cocos nucifera][more]
BLAST of MC08g_new0547 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MC08g_new0547 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g_new0547.1MC08g_new0547.1mRNA