MC08g_new0461 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g_new0461
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionNon-specific serine/threonine protein kinase
LocationMC08: 22674622 .. 22675861 (-)
RNA-Seq ExpressionMC08g_new0461
SyntenyMC08g_new0461
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCATTCAATAAAGAGAGAGAGAAGTTCATTAGGAAGTCGTTTTGTTTACCAAAGGCATCGTTTGAAGAGATACAGAAGGAATCAAAGGTTATTATCTCTATCCTCTGGGGTTATTAATTCTACTAATGTCTCCTTGAATATTTGTAAATTGGACAATGTTCTTTCTGATGACGATGAGGAAATTAGCACCAGCATTAGTAGTTTAGATTTGCCTATTGATTTGGACCCTCCAGATGTCTTATTTGAAGATTTTTTGGAGTATACTTTTACTGAAGATTTTCATGATCTTTTCAATGAAGATGAAGAGTCCATTTCCCAATATGGTAAGCTGGATTTCTGTCAAACTACTAAAAATGTGTTAATTCCTGACCTCCAATGGTAATCAACAAAGAAGGTCCCTCTCCCTTCTCAATCAGACAACATTTTTAAGAATCAGGAACATCACTTGTTCCATTCAAGAGTTCATCTTGAAGCTTTTTTGTGGAATGTCCGTGGTCTGGGAACTTTTCAGAAAAGAGTGTCTATCAAGAACTTTTTTAAATTTCATTGTCCTGGGTTTTTTTTTTTTTTTTTTTTTGAAGATCCAAAGAGTAACTTGGTGTAGACGTTTTATGGTCCTATTCTTTCTTTGTTTCGAAAAGATGGGAGAATATTTTGATATCTCTAGAGCGTCAAGAATGGTGTCCATTTTCAGCCCGATCTTAGCTTTAACATCCTGGGTTTCAGATCCTATGGATCCATTCTTTCCAAAGGATACAATTATTCTTGCTGTTCGAACAGTTGTCGATGGTTTTTTGATAATGGAGGTCAATGGAATGACGGTTGGTATTATTTTCAGAATCTTTCCGTCAAGGTTGAGTATTCATGTTTATTGTAGAGATACACTACAATTTTTCAGAAGCATTTCATCATAGGCATAATTGTCTTTGTTTGGCAGCAATTGAAGTGCTTATCAATATTGAATATTCTTGGTCTTAGAGCTGTTGTTTCTATCACTTCAAAGTGAGTCTGCATTCTGAATATGTGTTGTTCATACCAATAATTTCAAAGCTGTGAATTCTGAAGTTGAGAATGAGGTCAAAGATTCTTGAAGATGGTTTTTTGTTAGGCAACTTATTTCGGTGCAACAGATTTTGCTGCAAAATTTGGAGTTTGGGAACCTTCTCAGCTTGCTGTTCTTATCTTTTGTTTGGTCGTCATTTCTGATCATGTCCCAGCTTGAAGGGAGTGTCTAA

mRNA sequence

ATGATGCATTCAATAAAGAGAGAGAGAAGTTCATTAGGAAGTCGTTTTGTTTACCAAAGGCATCGTTTGAAGAGATACAGAAGGAATCAAAGGTTATTATCTCTATCCTCTGGGGTTATTAATTCTACTAATGTCTCCTTGAATATTTGTAAATTGGACAATGTTCTTTCTGATGACGATGAGGAAATTAGCACCAGCATTAGTAGTTTAGATTTGCCTATTGATTTGGACCCTCCAGATGTCTTATTTGAAGATTTTTTGGAGTATACTTTTACTGAAGATTTTCATGATCTTTTCAATGAAGATGAAGAGTCCATTTCCCAATATGATCCTATGGATCCATTCTTTCCAAAGGATACAATTATTCTTGCTGTTCGAACAGTTGTCGATGGTTTTTTGATAATGGAGGTCAATGGAATGACGCAATTGAAGTGCTTATCAATATTGAATATTCTTGGTCTTAGAGCTGTTGTTTCTATCACTTCAAAGCAACTTATTTCGGTGCAACAGATTTTGCTGCAAAATTTGGAGTTTGGGAACCTTCTCAGCTTGCTGTTCTTATCTTTTGTTTGGTCGTCATTTCTGATCATGTCCCAGCTTGAAGGGAGTGTCTAA

Coding sequence (CDS)

ATGATGCATTCAATAAAGAGAGAGAGAAGTTCATTAGGAAGTCGTTTTGTTTACCAAAGGCATCGTTTGAAGAGATACAGAAGGAATCAAAGGTTATTATCTCTATCCTCTGGGGTTATTAATTCTACTAATGTCTCCTTGAATATTTGTAAATTGGACAATGTTCTTTCTGATGACGATGAGGAAATTAGCACCAGCATTAGTAGTTTAGATTTGCCTATTGATTTGGACCCTCCAGATGTCTTATTTGAAGATTTTTTGGAGTATACTTTTACTGAAGATTTTCATGATCTTTTCAATGAAGATGAAGAGTCCATTTCCCAATATGATCCTATGGATCCATTCTTTCCAAAGGATACAATTATTCTTGCTGTTCGAACAGTTGTCGATGGTTTTTTGATAATGGAGGTCAATGGAATGACGCAATTGAAGTGCTTATCAATATTGAATATTCTTGGTCTTAGAGCTGTTGTTTCTATCACTTCAAAGCAACTTATTTCGGTGCAACAGATTTTGCTGCAAAATTTGGAGTTTGGGAACCTTCTCAGCTTGCTGTTCTTATCTTTTGTTTGGTCGTCATTTCTGATCATGTCCCAGCTTGAAGGGAGTGTCTAA

Protein sequence

MMHSIKRERSSLGSRFVYQRHRLKRYRRNQRLLSLSSGVINSTNVSLNICKLDNVLSDDDEEISTSISSLDLPIDLDPPDVLFEDFLEYTFTEDFHDLFNEDEESISQYDPMDPFFPKDTIILAVRTVVDGFLIMEVNGMTQLKCLSILNILGLRAVVSITSKQLISVQQILLQNLEFGNLLSLLFLSFVWSSFLIMSQLEGSV
Homology
[Close]
BLAST of MC08g_new0461 vs. NCBI nr
Match: XP_022135095.1 (serine/threonine-protein kinase ATM isoform X6 [Momordica charantia])

HSP 1 Score: 60.1 bits (144), Expect = 1.49e-06
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 110 DPMDPFFPKDTIILAVRTVVDGFLIMEVNGMT 141
           +PMDPFFPKDTI+LAVRTVVDGFL ME NGMT
Sbjct: 813 EPMDPFFPKDTIVLAVRTVVDGFLEMEDNGMT 844

[Close]
BLAST of MC08g_new0461 vs. NCBI nr
Match: XP_022135094.1 (serine/threonine-protein kinase ATM isoform X5 [Momordica charantia])

HSP 1 Score: 60.1 bits (144), Expect = 1.51e-06
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 110  DPMDPFFPKDTIILAVRTVVDGFLIMEVNGMT 141
            +PMDPFFPKDTI+LAVRTVVDGFL ME NGMT
Sbjct: 1301 EPMDPFFPKDTIVLAVRTVVDGFLEMEDNGMT 1332

[Close]
BLAST of MC08g_new0461 vs. NCBI nr
Match: XP_022135093.1 (serine/threonine-protein kinase ATM isoform X4 [Momordica charantia])

HSP 1 Score: 60.1 bits (144), Expect = 1.51e-06
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 110  DPMDPFFPKDTIILAVRTVVDGFLIMEVNGMT 141
            +PMDPFFPKDTI+LAVRTVVDGFL ME NGMT
Sbjct: 1301 EPMDPFFPKDTIVLAVRTVVDGFLEMEDNGMT 1332

[Close]
BLAST of MC08g_new0461 vs. NCBI nr
Match: XP_022135092.1 (serine/threonine-protein kinase ATM isoform X3 [Momordica charantia])

HSP 1 Score: 60.1 bits (144), Expect = 1.51e-06
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 110  DPMDPFFPKDTIILAVRTVVDGFLIMEVNGMT 141
            +PMDPFFPKDTI+LAVRTVVDGFL ME NGMT
Sbjct: 1301 EPMDPFFPKDTIVLAVRTVVDGFLEMEDNGMT 1332

[Close]
BLAST of MC08g_new0461 vs. NCBI nr
Match: XP_022135091.1 (serine/threonine-protein kinase ATM isoform X2 [Momordica charantia])

HSP 1 Score: 60.1 bits (144), Expect = 1.51e-06
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 110  DPMDPFFPKDTIILAVRTVVDGFLIMEVNGMT 141
            +PMDPFFPKDTI+LAVRTVVDGFL ME NGMT
Sbjct: 1301 EPMDPFFPKDTIVLAVRTVVDGFLEMEDNGMT 1332

[Close]
BLAST of MC08g_new0461 vs. ExPASy TrEMBL
Match: A0A6J1C059 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111007159 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.24e-07
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 110 DPMDPFFPKDTIILAVRTVVDGFLIMEVNGMT 141
           +PMDPFFPKDTI+LAVRTVVDGFL ME NGMT
Sbjct: 813 EPMDPFFPKDTIVLAVRTVVDGFLEMEDNGMT 844

[Close]
BLAST of MC08g_new0461 vs. ExPASy TrEMBL
Match: A0A6J1C0I0 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111007159 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.29e-07
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 110  DPMDPFFPKDTIILAVRTVVDGFLIMEVNGMT 141
            +PMDPFFPKDTI+LAVRTVVDGFL ME NGMT
Sbjct: 1301 EPMDPFFPKDTIVLAVRTVVDGFLEMEDNGMT 1332

[Close]
BLAST of MC08g_new0461 vs. ExPASy TrEMBL
Match: A0A6J1C3U7 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111007159 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.29e-07
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 110  DPMDPFFPKDTIILAVRTVVDGFLIMEVNGMT 141
            +PMDPFFPKDTI+LAVRTVVDGFL ME NGMT
Sbjct: 1301 EPMDPFFPKDTIVLAVRTVVDGFLEMEDNGMT 1332

[Close]
BLAST of MC08g_new0461 vs. ExPASy TrEMBL
Match: A0A6J1C1N7 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111007159 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.30e-07
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 110  DPMDPFFPKDTIILAVRTVVDGFLIMEVNGMT 141
            +PMDPFFPKDTI+LAVRTVVDGFL ME NGMT
Sbjct: 1301 EPMDPFFPKDTIVLAVRTVVDGFLEMEDNGMT 1332

[Close]
BLAST of MC08g_new0461 vs. ExPASy TrEMBL
Match: A0A6J1BZM9 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111007159 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.30e-07
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 110  DPMDPFFPKDTIILAVRTVVDGFLIMEVNGMT 141
            +PMDPFFPKDTI+LAVRTVVDGFL ME NGMT
Sbjct: 1301 EPMDPFFPKDTIVLAVRTVVDGFLEMEDNGMT 1332

The following BLAST results are available for this feature:
BLAST of MC08g_new0461 vs.
Match NameE-valueIdentityDescription
BLAST of MC08g_new0461 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022135095.11.49e-0687.50serine/threonine-protein kinase ATM isoform X6 [Momordica charantia][more]
XP_022135094.11.51e-0687.50serine/threonine-protein kinase ATM isoform X5 [Momordica charantia][more]
XP_022135093.11.51e-0687.50serine/threonine-protein kinase ATM isoform X4 [Momordica charantia][more]
XP_022135092.11.51e-0687.50serine/threonine-protein kinase ATM isoform X3 [Momordica charantia][more]
XP_022135091.11.51e-0687.50serine/threonine-protein kinase ATM isoform X2 [Momordica charantia][more]
BLAST of MC08g_new0461 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C0597.24e-0787.50Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1C0I07.29e-0787.50Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1C3U77.29e-0787.50Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1C1N77.30e-0787.50Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1BZM97.30e-0787.50Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=L... [more]
BLAST of MC08g_new0461 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g_new0461.1MC08g_new0461.1mRNA