MC08g_new0453 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g_new0453
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC08: 22342774 .. 22343645 (+)
RNA-Seq Expression	MC08g_new0453
Synteny	MC08g_new0453

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGGAGATCGGGTTCGAGCTTGGTTCAAGAAATATCGTTGTGCAGATCTTTGCATAAACATTTGGCGCCGTCTGTGGGGAGAACGATCTAAGTCATCCCGATTTAAAAGTGTGAACAAAAATGGTTCAGCCAGCAAACTCAACCAACATGGCCGACCGAAGAGCTCTAGCGGCCAATGATGGCCACCAGAGGGAGGTCGCGGCAGAGGTGGTAAAAGGACAGGGTCATGAAGGCCTGGGGACAGAGCCTCTCCGCAGGTCGGCGCGCATCACCACGCCCGTTCTGCCACCAGCACATCCAAAGCCATCCAAGGCCAATCGCGGCAGAGGTAGGGCTTCGAAGAGAACCACCCGAGGACCAGCCCCAGCTCCAACAAGGGAGAATTTCGATGCACTCCAGAAAGAAATGGAGGCAATGCGCACTCAGATGCACACCATGGAAGAGATGTACAGCAAGATGGTGCAAGCTGCGAGCGCTGGATCTCGGTCTGAAAATCGAGTGGCACGCGATGACATGCGGGAGCAAAGGGGTCATCACCTCGGTCTAGTCGAGGAAGGGTACCCTGAGGGAGGTGAGGACGAGGAGTACCCTCACCAGAGGGGTGGCCTCCGCGAGCATCTCAATAGAAAGAGAAGCTCGTCCCTCCGAAAGGGACAGTCTCCGTCCTGCTCACACAGGAACTCCAATCAACAGGCAGAGTCCTCCTACAATCCAATAACTCCCGAATGAGTGACCACAAGGGAGGAGTTCGACCAGCTAAAGAGCAAGTTTGATGCCCAGGTTGAGGCCTTGAAGGCTAGGTGCGAGAAAAAAGAAAGTCCGTTTGATGATGACGACCTGGGAGAATCGCCATTCACCTCGGACATTCTAG

mRNA sequence

ATGGTTCAGCCAGCAAACTCAACCAACATGGCCGACCGAAGAGCTCTAGCGGCCAATGATGGCCACCAGAGGGAGGTCGCGGCAGAGGTGGTAAAAGGACAGGGTCATGAAGGCCTGGGGACAGAGCCTCTCCGCAGGTCGGCGCGCATCACCACGCCCGTTCTGCCACCAGCACATCCAAAGCCATCCAAGGCCAATCGCGGCAGAGGTAGGGCTTCGAAGAGAACCACCCGAGGACCAGCCCCAGCTCCAACAAGGGAGAATTTCGATGCACTCCAGAAAGAAATGGAGGCAATGCGCACTCAGATGCACACCATGGAAGAGATGTACAGCAAGATGGTGCAAGCTGCGAGCGCTGGATCTCGGTCTGAAAATCGAGTGGCACGCGATGACATGCGGGAGCAAAGGGGTCATCACCTCGGTCTAGTCGAGGAAGGGTACCCTGAGGGAGGTGAGGACGAGGAGTACCCTCACCAGAGGGGTGGCCTCCGCGAGCATCTCAATAGAAAGAGAAGCTCGTCCCTCCGAAAGGGACAGTCTCCGTCCTGCTCACACAGGAACTCCAATCAACAGGCAGAGTCCTCCTACAATCCAATAACTCCCGAATGA

Coding sequence (CDS)

ATGGTTCAGCCAGCAAACTCAACCAACATGGCCGACCGAAGAGCTCTAGCGGCCAATGATGGCCACCAGAGGGAGGTCGCGGCAGAGGTGGTAAAAGGACAGGGTCATGAAGGCCTGGGGACAGAGCCTCTCCGCAGGTCGGCGCGCATCACCACGCCCGTTCTGCCACCAGCACATCCAAAGCCATCCAAGGCCAATCGCGGCAGAGGTAGGGCTTCGAAGAGAACCACCCGAGGACCAGCCCCAGCTCCAACAAGGGAGAATTTCGATGCACTCCAGAAAGAAATGGAGGCAATGCGCACTCAGATGCACACCATGGAAGAGATGTACAGCAAGATGGTGCAAGCTGCGAGCGCTGGATCTCGGTCTGAAAATCGAGTGGCACGCGATGACATGCGGGAGCAAAGGGGTCATCACCTCGGTCTAGTCGAGGAAGGGTACCCTGAGGGAGGTGAGGACGAGGAGTACCCTCACCAGAGGGGTGGCCTCCGCGAGCATCTCAATAGAAAGAGAAGCTCGTCCCTCCGAAAGGGACAGTCTCCGTCCTGCTCACACAGGAACTCCAATCAACAGGCAGAGTCCTCCTACAATCCAATAACTCCCGAATGA

Protein sequence

MVQPANSTNMADRRALAANDGHQREVAAEVVKGQGHEGLGTEPLRRSARITTPVLPPAHPKPSKANRGRGRASKRTTRGPAPAPTRENFDALQKEMEAMRTQMHTMEEMYSKMVQAASAGSRSENRVARDDMREQRGHHLGLVEEGYPEGGEDEEYPHQRGGLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPE

Homology

[Close]

BLAST of MC08g_new0453 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 252 bits (643), Expect = 9.41e-79
Identity = 141/202 (69.80%), Postives = 154/202 (76.24%), Query Frame = 0


Query: 1   MVQPANSTNMADRRALAANDGHQREVAAEVVKGQGHEGLGTEPLRRSARITTPVLPPAHP 60
           MVQP +STN  DRRAL ANDGHQREV AEVV+GQ HEGLGTEP  RSARITTP L PAHP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  KPSKANRGRGRASKRTTRGPAPAPTRENFDALQKEMEAMRTQMHTMEEMYSKMVQAASAG 120
           KP KANRGRG AS+RTT G APAP+RENFDALQKEMEAMRTQM TMEEMY++MVQA  AG
Sbjct: 61  KPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQAVGAG 120

Query: 121 SRSENRVARDDMREQRGHHLGLVEEGYPEGGEDEEYPHQRGGLREHLNRKRSSSLRKGQS 180
           SRSE+R ARD+                            RG LR+HL+RKRSSSLRKG+S
Sbjct: 121 SRSEDRAARDE----------------------------RGDLRDHLSRKRSSSLRKGRS 174

Query: 181 PSCSHRNSNQQAESSYNPITPE 202
           PSCSH+NSNQQAESSYNP+ PE
Sbjct: 181 PSCSHKNSNQQAESSYNPVVPE 174

[Close]

BLAST of MC08g_new0453 vs. NCBI nr
Match: XP_022151719.1 (uncharacterized protein LOC111019634 [Momordica charantia])

HSP 1 Score: 170 bits (431), Expect = 2.14e-47
Identity = 91/104 (87.50%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 99  MRTQMHTMEEMYSKMVQAASAGSRSENRVARDDMREQRGHHLGLVEEGYPEGGEDEEYPH 158
           MRTQM TME+MYS+MVQAA A SRSENRVAR+DM EQRGHHLG V++G+PEGGEDEEY H
Sbjct: 1   MRTQMCTMEKMYSEMVQAAGARSRSENRVARNDMHEQRGHHLGPVKKGHPEGGEDEEYTH 60

Query: 159 QRGGLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPE 202
           QRG LREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPE
Sbjct: 61  QRGDLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPE 104

[Close]

BLAST of MC08g_new0453 vs. NCBI nr
Match: XP_022152854.1 (uncharacterized protein LOC111020479 [Momordica charantia])

HSP 1 Score: 120 bits (301), Expect = 1.39e-27
Identity = 66/98 (67.35%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 1  MVQPANSTNMADRRALAANDGHQREVAAEVVKGQGHEGLGTEPLRRSARITTPVLPPAHP 60
          MVQPANSTN ADRRALAAN GHQREV AEVV+GQGHE LGTEPL RSARITTPVLPPAHP
Sbjct: 1  MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61 KPSKANRGRGRASKRTTRGPAPAPTRENFDALQKEMEA 98
          KPSKA       +           TRE FD L+ + +A
Sbjct: 61 KPSKAESSYNPITPGVI-------TREEFDQLKSKFDA 91

[Close]

BLAST of MC08g_new0453 vs. NCBI nr
Match: XP_022155128.1 (uncharacterized protein LOC111022267 [Momordica charantia])

HSP 1 Score: 90.5 bits (223), Expect = 1.46e-17
Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0


Query: 151 GEDEEYPHQRGGLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPE 202
           GEDEEY HQRG LREHLNRKRSSSLRKGQSPS SHRNSNQQAESSYNPITP+
Sbjct: 32  GEDEEYTHQRGDLREHLNRKRSSSLRKGQSPSSSHRNSNQQAESSYNPITPK 83

[Close]

BLAST of MC08g_new0453 vs. NCBI nr
Match: XP_022156088.1 (uncharacterized protein LOC111023060 [Momordica charantia])

HSP 1 Score: 91.3 bits (225), Expect = 1.90e-17
Identity = 59/107 (55.14%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 96  MEAMRTQMHTMEEMYSKMVQAASAGSRSENRVARDDMREQRGHHLGLVEEGYPEGGEDEE 155
           MEAMRTQM TMEEMY+KMVQ A A SRS ++V  +D+ EQ   H   V+E          
Sbjct: 1   MEAMRTQMRTMEEMYNKMVQIAGARSRSGDQVVHEDVHEQGDLHCDPVDE---------- 60

Query: 156 YPHQRGGLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPE 202
             H  G LR+HLNRKR+SS R  ++ +  H+NSNQQAESSYNPI PE
Sbjct: 61  -EHLGGDLRDHLNRKRNSSHRGERTSTYWHKNSNQQAESSYNPIAPE 96

[Close]

BLAST of MC08g_new0453 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 252 bits (643), Expect = 4.56e-79
Identity = 141/202 (69.80%), Postives = 154/202 (76.24%), Query Frame = 0


Query: 1   MVQPANSTNMADRRALAANDGHQREVAAEVVKGQGHEGLGTEPLRRSARITTPVLPPAHP 60
           MVQP +STN  DRRAL ANDGHQREV AEVV+GQ HEGLGTEP  RSARITTP L PAHP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  KPSKANRGRGRASKRTTRGPAPAPTRENFDALQKEMEAMRTQMHTMEEMYSKMVQAASAG 120
           KP KANRGRG AS+RTT G APAP+RENFDALQKEMEAMRTQM TMEEMY++MVQA  AG
Sbjct: 61  KPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQAVGAG 120

Query: 121 SRSENRVARDDMREQRGHHLGLVEEGYPEGGEDEEYPHQRGGLREHLNRKRSSSLRKGQS 180
           SRSE+R ARD+                            RG LR+HL+RKRSSSLRKG+S
Sbjct: 121 SRSEDRAARDE----------------------------RGDLRDHLSRKRSSSLRKGRS 174

Query: 181 PSCSHRNSNQQAESSYNPITPE 202
           PSCSH+NSNQQAESSYNP+ PE
Sbjct: 181 PSCSHKNSNQQAESSYNPVVPE 174

[Close]

BLAST of MC08g_new0453 vs. ExPASy TrEMBL
Match: A0A6J1DDW5 (uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019634 PE=4 SV=1)

HSP 1 Score: 170 bits (431), Expect = 1.04e-47
Identity = 91/104 (87.50%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 99  MRTQMHTMEEMYSKMVQAASAGSRSENRVARDDMREQRGHHLGLVEEGYPEGGEDEEYPH 158
           MRTQM TME+MYS+MVQAA A SRSENRVAR+DM EQRGHHLG V++G+PEGGEDEEY H
Sbjct: 1   MRTQMCTMEKMYSEMVQAAGARSRSENRVARNDMHEQRGHHLGPVKKGHPEGGEDEEYTH 60

Query: 159 QRGGLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPE 202
           QRG LREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPE
Sbjct: 61  QRGDLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPE 104

[Close]

BLAST of MC08g_new0453 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1)

HSP 1 Score: 120 bits (301), Expect = 6.73e-28
Identity = 66/98 (67.35%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 1  MVQPANSTNMADRRALAANDGHQREVAAEVVKGQGHEGLGTEPLRRSARITTPVLPPAHP 60
          MVQPANSTN ADRRALAAN GHQREV AEVV+GQGHE LGTEPL RSARITTPVLPPAHP
Sbjct: 1  MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61 KPSKANRGRGRASKRTTRGPAPAPTRENFDALQKEMEA 98
          KPSKA       +           TRE FD L+ + +A
Sbjct: 61 KPSKAESSYNPITPGVI-------TREEFDQLKSKFDA 91

[Close]

BLAST of MC08g_new0453 vs. ExPASy TrEMBL
Match: A0A6J1DM55 (uncharacterized protein LOC111022267 OS=Momordica charantia OX=3673 GN=LOC111022267 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 7.05e-18
Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0


Query: 151 GEDEEYPHQRGGLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPE 202
           GEDEEY HQRG LREHLNRKRSSSLRKGQSPS SHRNSNQQAESSYNPITP+
Sbjct: 32  GEDEEYTHQRGDLREHLNRKRSSSLRKGQSPSSSHRNSNQQAESSYNPITPK 83

[Close]

BLAST of MC08g_new0453 vs. ExPASy TrEMBL
Match: A0A6J1DPN4 (uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023060 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.19e-18
Identity = 59/107 (55.14%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 96  MEAMRTQMHTMEEMYSKMVQAASAGSRSENRVARDDMREQRGHHLGLVEEGYPEGGEDEE 155
           MEAMRTQM TMEEMY+KMVQ A A SRS ++V  +D+ EQ   H   V+E          
Sbjct: 1   MEAMRTQMRTMEEMYNKMVQIAGARSRSGDQVVHEDVHEQGDLHCDPVDE---------- 60

Query: 156 YPHQRGGLREHLNRKRSSSLRKGQSPSCSHRNSNQQAESSYNPITPE 202
             H  G LR+HLNRKR+SS R  ++ +  H+NSNQQAESSYNPI PE
Sbjct: 61  -EHLGGDLRDHLNRKRNSSHRGERTSTYWHKNSNQQAESSYNPIAPE 96

The following BLAST results are available for this feature:

BLAST of MC08g_new0453 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g_new0453 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159327.1	9.41e-79	69.80	uncharacterized protein LOC111025738 [Momordica charantia]	[more]
XP_022151719.1	2.14e-47	87.50	uncharacterized protein LOC111019634 [Momordica charantia]	[more]
XP_022152854.1	1.39e-27	67.35	uncharacterized protein LOC111020479 [Momordica charantia]	[more]
XP_022155128.1	1.46e-17	92.31	uncharacterized protein LOC111022267 [Momordica charantia]	[more]
XP_022156088.1	1.90e-17	55.14	uncharacterized protein LOC111023060 [Momordica charantia]	[more]

BLAST of MC08g_new0453 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZJ1	4.56e-79	69.80	uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DDW5	1.04e-47	87.50	uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DHB3	6.73e-28	67.35	uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1DM55	7.05e-18	92.31	uncharacterized protein LOC111022267 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DPN4	9.19e-18	55.14	uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of MC08g_new0453 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g_new0453.1	MC08g_new0453.1	mRNA