MC08g_new0452 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g_new0452
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC08: 22318730 .. 22319332 (+)
RNA-Seq Expression	MC08g_new0452
Synteny	MC08g_new0452

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATGAAGACAGTACAGAAGCAAGAGAGAGTTGTGGGTCATCGCTCAAACGCTAAGGCTCTTTCATGCCAAAAGAAAAGTCATGCAAGCAAATTCACAACTATATTGAAACCGGCTACCGTCATAACCAAGAAAGCTGAACTCACAAATGGTGCTGGTCCAGTTGGTGATGGGTTTGAAAATGTCACCCGAAAAAAGACAAGTGAAGGATCTGAATTCAAAACTCCGCCAGTTGGTGGTGGGTCTAAAAATGTCACCAGAAAGACAAGTGAAGCATATGAATTCAAAACTCCACCCATGTCACCTACCAAGACTGCCCGAGTAATGGGCCTGAAAGCCAGATTTGGTACTACAATTTTGAAAGCTCAACAGGTACTTTTCAATTCTGGAAATACGGCTCCTGCCCCTGCTCCAACTCCAGCTCCAGCTTTTGCTCCTGCCAGTTGCATTGCTGTTCCCAAGACATGCTTTAGCTCTATAGAACAACAAAGACGAGCTGCCAGAGAAGCCCTAGAGAAGGTCCAACCAGTGTTTGATTTCAACCAGAATCTTGATTCCATGAGGGACTTTGAACAACTAATTAGAGGGGGCAACAAGTAG

mRNA sequence

ATGAAGATGAAGACAGTACAGAAGCAAGAGAGAGTTGTGGGTCATCGCTCAAACGCTAAGGCTCTTTCATGCCAAAAGAAAAGTCATGCAAGCAAATTCACAACTATATTGAAACCGGCTACCGTCATAACCAAGAAAGCTGAACTCACAAATGGTGCTGGTCCAGTTGGTGATGGGTTTGAAAATGTCACCCGAAAAAAGACAAGTGAAGGATCTGAATTCAAAACTCCGCCAGTTGGTGGTGGGTCTAAAAATGTCACCAGAAAGACAAGTGAAGCATATGAATTCAAAACTCCACCCATGTCACCTACCAAGACTGCCCGAGTAATGGGCCTGAAAGCCAGATTTGGTACTACAATTTTGAAAGCTCAACAGGTACTTTTCAATTCTGGAAATACGGCTCCTGCCCCTGCTCCAACTCCAGCTCCAGCTTTTGCTCCTGCCAGTTGCATTGCTGTTCCCAAGACATGCTTTAGCTCTATAGAACAACAAAGACGAGCTGCCAGAGAAGCCCTAGAGAAGGTCCAACCAGTGTTTGATTTCAACCAGAATCTTGATTCCATGAGGGACTTTGAACAACTAATTAGAGGGGGCAACAAGTAG

Coding sequence (CDS)

ATGAAGATGAAGACAGTACAGAAGCAAGAGAGAGTTGTGGGTCATCGCTCAAACGCTAAGGCTCTTTCATGCCAAAAGAAAAGTCATGCAAGCAAATTCACAACTATATTGAAACCGGCTACCGTCATAACCAAGAAAGCTGAACTCACAAATGGTGCTGGTCCAGTTGGTGATGGGTTTGAAAATGTCACCCGAAAAAAGACAAGTGAAGGATCTGAATTCAAAACTCCGCCAGTTGGTGGTGGGTCTAAAAATGTCACCAGAAAGACAAGTGAAGCATATGAATTCAAAACTCCACCCATGTCACCTACCAAGACTGCCCGAGTAATGGGCCTGAAAGCCAGATTTGGTACTACAATTTTGAAAGCTCAACAGGTACTTTTCAATTCTGGAAATACGGCTCCTGCCCCTGCTCCAACTCCAGCTCCAGCTTTTGCTCCTGCCAGTTGCATTGCTGTTCCCAAGACATGCTTTAGCTCTATAGAACAACAAAGACGAGCTGCCAGAGAAGCCCTAGAGAAGGTCCAACCAGTGTTTGATTTCAACCAGAATCTTGATTCCATGAGGGACTTTGAACAACTAATTAGAGGGGGCAACAAGTAG

Protein sequence

MKMKTVQKQERVVGHRSNAKALSCQKKSHASKFTTILKPATVITKKAELTNGAGPVGDGFENVTRKKTSEGSEFKTPPVGGGSKNVTRKTSEAYEFKTPPMSPTKTARVMGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPKTCFSSIEQQRRAAREALEKVQPVFDFNQNLDSMRDFEQLIRGGNK

Homology

[Close]

BLAST of MC08g_new0452 vs. NCBI nr
Match: KAE8647905.1 (hypothetical protein Csa_000421, partial [Cucumis sativus])

HSP 1 Score: 90.5 bits (223), Expect = 5.68e-19
Identity = 64/163 (39.26%), Postives = 88/163 (53.99%), Query Frame = 0


Query: 36  ILKPATVITKKAELTNGAGPVGDGFENVTRKKTSEGSEFKTPPVGGGSKNVTRKTSEAYE 95
           +LKP  + TK   +T    P    ++    K   E + FK P      KN          
Sbjct: 20  VLKPKVLSTK---VTTAMKPYNI-YQRKESKSDRELANFKCPSP---KKNNIELLPVKPN 79

Query: 96  FKTPPMSPTKTARVMGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPK 155
                +SP + ARV  LKA+FG+TILKAQQ L NS N +          +      A PK
Sbjct: 80  TTIVVLSPRRAARVEVLKAKFGSTILKAQQKLQNSNNDSNK--------YEYVVVGATPK 139

Query: 156 TCFSSIEQQRRAAREALEKVQPVFDFNQNLDSMRDFEQLIRGG 198
           TC S +++Q+RA+REAL+K+ PVFDFN+NLDSMR+FE+++  G
Sbjct: 140 TC-SILQEQKRASREALDKINPVFDFNENLDSMREFEKILESG 166

[Close]

BLAST of MC08g_new0452 vs. NCBI nr
Match: TYK19957.1 (hypothetical protein E5676_scaffold134G00700 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 3.70e-18
Identity = 60/147 (40.82%), Postives = 86/147 (58.50%), Query Frame = 0


Query: 56  VGDGFENVTRKKTS----EGSEFKTPPVGGGSKNVTRKTSEAYEFKTP--PMSPTKTARV 115
           VG+ +  + + K S    E ++F++P     SKN    T    + KT    +SP + ARV
Sbjct: 29  VGELYTAIHQTKKSNSNHELAKFESP----SSKNNNSPTLSPKKTKTTIIVLSPRQAARV 88

Query: 116 MGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPKTCFSSIEQQRRAAR 175
             LK +FG+TILKAQQ L N  +                  +  PK C  SI++QRRA+R
Sbjct: 89  EMLKEKFGSTILKAQQKLSNKDSN-----------IYKYVVVEAPKVC--SIQEQRRASR 148

Query: 176 EALEKVQPVFDFNQNLDSMRDFEQLIR 196
           E+L+K++PVFDFN+NLDSMRDFE+L++
Sbjct: 149 ESLDKIKPVFDFNENLDSMRDFEELLK 158

[Close]

BLAST of MC08g_new0452 vs. NCBI nr
Match: KAA0064635.1 (hypothetical protein E6C27_scaffold255G003590 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 3.70e-18
Identity = 60/147 (40.82%), Postives = 86/147 (58.50%), Query Frame = 0


Query: 56  VGDGFENVTRKKTS----EGSEFKTPPVGGGSKNVTRKTSEAYEFKTP--PMSPTKTARV 115
           VG+ +  + + K S    E ++F++P     SKN    T    + KT    +SP + ARV
Sbjct: 29  VGELYTAIHQTKKSNSNHELAKFESP----SSKNNNSTTLSPKKTKTTIIVLSPRQAARV 88

Query: 116 MGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPKTCFSSIEQQRRAAR 175
             LK +FG+TILKAQQ L N  +                  +  PK C  SI++QRRA+R
Sbjct: 89  EMLKEKFGSTILKAQQKLSNKDSN-----------IYKYVVVEAPKVC--SIQEQRRASR 148

Query: 176 EALEKVQPVFDFNQNLDSMRDFEQLIR 196
           E+L+K++PVFDFN+NLDSMRDFE+L++
Sbjct: 149 ESLDKIKPVFDFNENLDSMRDFEELLK 158

[Close]

BLAST of MC08g_new0452 vs. NCBI nr
Match: KGN61401.2 (hypothetical protein Csa_006690, partial [Cucumis sativus])

HSP 1 Score: 85.5 bits (210), Expect = 4.74e-17
Identity = 60/163 (36.81%), Postives = 86/163 (52.76%), Query Frame = 0


Query: 36  ILKPATVITKKAELTNGAGPVGDGFENVTRKKTSEGSEFKTPPVGGGSKNVTRKTSEAYE 95
           +LKP  + TK   +T    P    +    RK+++   E          KN          
Sbjct: 20  VLKPKVLSTK---VTTAMKP----YNIYQRKESNSDRELANFKCPSPKKNNIELLPIKPN 79

Query: 96  FKTPPMSPTKTARVMGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPK 155
                +SP + ARV  LKA+FG+TILKAQQ L NS N +          +      A PK
Sbjct: 80  TTIVVLSPRRAARVEVLKAKFGSTILKAQQKLQNSNNDSNK--------YEYVVVGATPK 139

Query: 156 TCFSSIEQQRRAAREALEKVQPVFDFNQNLDSMRDFEQLIRGG 198
            C S +++Q+RA+REAL+K+ PVF+FN+NLDSMR+FE+++  G
Sbjct: 140 AC-SILQEQKRASREALDKINPVFNFNENLDSMREFEKILESG 166

[Close]

BLAST of MC08g_new0452 vs. NCBI nr
Match: KAE8647906.1 (hypothetical protein Csa_000254, partial [Cucumis sativus])

HSP 1 Score: 74.3 bits (181), Expect = 4.21e-13
Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 101 MSPTKTARVMGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPKTCFSS 160
           +SP + ARV  LKA+FG+TI KAQQ L  S N +          +      A PKTC S 
Sbjct: 45  LSPRRAARVEVLKAKFGSTIWKAQQKLQKSNNDSNK--------YEYVVIGATPKTC-SI 104

Query: 161 IEQQRRAAREALEK-VQPVFDFNQNLDSMRDFEQ 193
           +++Q+RA+REAL+K + PVFDFN+NLDSM++FE+
Sbjct: 105 LQEQKRASREALDKMINPVFDFNENLDSMKEFER 129

[Close]

BLAST of MC08g_new0452 vs. ExPASy TrEMBL
Match: A0A5A7VFH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003590 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.79e-18
Identity = 60/147 (40.82%), Postives = 86/147 (58.50%), Query Frame = 0


Query: 56  VGDGFENVTRKKTS----EGSEFKTPPVGGGSKNVTRKTSEAYEFKTP--PMSPTKTARV 115
           VG+ +  + + K S    E ++F++P     SKN    T    + KT    +SP + ARV
Sbjct: 29  VGELYTAIHQTKKSNSNHELAKFESP----SSKNNNSTTLSPKKTKTTIIVLSPRQAARV 88

Query: 116 MGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPKTCFSSIEQQRRAAR 175
             LK +FG+TILKAQQ L N  +                  +  PK C  SI++QRRA+R
Sbjct: 89  EMLKEKFGSTILKAQQKLSNKDSN-----------IYKYVVVEAPKVC--SIQEQRRASR 148

Query: 176 EALEKVQPVFDFNQNLDSMRDFEQLIR 196
           E+L+K++PVFDFN+NLDSMRDFE+L++
Sbjct: 149 ESLDKIKPVFDFNENLDSMRDFEELLK 158

[Close]

BLAST of MC08g_new0452 vs. ExPASy TrEMBL
Match: A0A5D3D8Q3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00700 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.79e-18
Identity = 60/147 (40.82%), Postives = 86/147 (58.50%), Query Frame = 0


Query: 56  VGDGFENVTRKKTS----EGSEFKTPPVGGGSKNVTRKTSEAYEFKTP--PMSPTKTARV 115
           VG+ +  + + K S    E ++F++P     SKN    T    + KT    +SP + ARV
Sbjct: 29  VGELYTAIHQTKKSNSNHELAKFESP----SSKNNNSPTLSPKKTKTTIIVLSPRQAARV 88

Query: 116 MGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPKTCFSSIEQQRRAAR 175
             LK +FG+TILKAQQ L N  +                  +  PK C  SI++QRRA+R
Sbjct: 89  EMLKEKFGSTILKAQQKLSNKDSN-----------IYKYVVVEAPKVC--SIQEQRRASR 148

Query: 176 EALEKVQPVFDFNQNLDSMRDFEQLIR 196
           E+L+K++PVFDFN+NLDSMRDFE+L++
Sbjct: 149 ESLDKIKPVFDFNENLDSMRDFEELLK 158

[Close]

BLAST of MC08g_new0452 vs. ExPASy TrEMBL
Match: A0A0A0KRB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162640 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.12e-15
Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 101 MSPTKTARVMGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPKTCFSS 160
           +SP + ARV  LKA+FG+TILKAQQ L NS N +                 A P  C  S
Sbjct: 43  LSPRRAARVEVLKAKFGSTILKAQQKLHNSNNDSNKHEYIVG---------ATPNIC--S 102

Query: 161 IEQQRRAAREALEKVQPVFDFNQNLDSMRDFEQLI 195
           I++QR+A REAL+K+ P FDFN+NLDSMR+F +L+
Sbjct: 103 IQEQRQALREALDKINPAFDFNENLDSMREFAKLL 126

[Close]

BLAST of MC08g_new0452 vs. ExPASy TrEMBL
Match: A0A0A0KMZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G164650 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 5.41e-13
Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 101 MSPTKTARVMGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPKTCFSS 160
           +SP + ARV  LKA+FG+TI KAQQ L  S N +          +      A PKTC S 
Sbjct: 73  LSPRRAARVEVLKAKFGSTIWKAQQKLQKSNNDSNK--------YEYVVIGATPKTC-SI 132

Query: 161 IEQQRRAAREALEK-VQPVFDFNQNLDSMRDFEQ 193
           +++Q+RA+REAL+K + PVFDFN+NLDSM++FE+
Sbjct: 133 LQEQKRASREALDKMINPVFDFNENLDSMKEFER 157

[Close]

BLAST of MC08g_new0452 vs. ExPASy TrEMBL
Match: A0A314YIV3 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_02267 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.20e-05
Identity = 36/99 (36.36%), Postives = 50/99 (50.51%), Query Frame = 0


Query: 101 MSPTKTARVMGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPKTCFSS 160
           +SP + ARV  LKARF  TI KA+Q +  SG+            F  A  +   +     
Sbjct: 60  LSPRRAARVAMLKARFAGTIFKAKQEVLYSGSNGLGNTEDEIKKFRAAEMMKANEYIKEQ 119

Query: 161 IEQQRRAAREALEKVQPVFDFNQNLDSMRDFEQLIRGGN 199
            ++ R AAR ALE+++     + N  +MRDFE LI G N
Sbjct: 120 RQRDREAARLALEEMERNVVIDDNFKTMRDFEMLISGAN 158

The following BLAST results are available for this feature:

BLAST of MC08g_new0452 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g_new0452 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647905.1	5.68e-19	39.26	hypothetical protein Csa_000421, partial [Cucumis sativus]	[more]
TYK19957.1	3.70e-18	40.82	hypothetical protein E5676_scaffold134G00700 [Cucumis melo var. makuwa]	[more]
KAA0064635.1	3.70e-18	40.82	hypothetical protein E6C27_scaffold255G003590 [Cucumis melo var. makuwa]	[more]
KGN61401.2	4.74e-17	36.81	hypothetical protein Csa_006690, partial [Cucumis sativus]	[more]
KAE8647906.1	4.21e-13	48.94	hypothetical protein Csa_000254, partial [Cucumis sativus]	[more]

BLAST of MC08g_new0452 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VFH7	1.79e-18	40.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D8Q3	1.79e-18	40.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KRB6	8.12e-15	49.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162640 PE=4 SV=1	[more]
A0A0A0KMZ1	5.41e-13	48.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G164650 PE=4 SV=1	[more]
A0A314YIV3	5.20e-05	36.36	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_022...	[more]

BLAST of MC08g_new0452 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g_new0452.1	MC08g_new0452.1	mRNA