MC08g_new0451 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g_new0451
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 22296863 .. 22297465 (+)
RNA-Seq ExpressionMC08g_new0451
SyntenyMC08g_new0451
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATGAAGACAGTACAGAAGCAAGAGAGAGTTGTGGGTCATCGCTCAAACGCTAAGGCTCTTTCATGCCAAAAGAAAAGTCATGCAAGCAAATTCACAACTATATTGAAACCGGCTACCGTCATAACCAAGAAAGCTGAACTCACAAATGGTGCTGGTCCAGTTGGTGATGGGTTTGAAAATGTCACCCGAAAAAAGACAAGTGAAGGATCTGAATTCAAAACTCCGCCAGTTGGTGGTGGGTCTAAAAATGTCACCAGAAAGACAAGTGAAGCATATGAATTCAAAACTCCACCCATGTCACCTACCAAGACTGCCCGAGTAATGGGCCTGAAAGCCAGATTTGGTACTACAATTTTGAAAGCTCAACAGGTACTTTTCAATTCTGGAAATACGGCTCCTGCCCCTGCTCCAACTCCAGCTCCAGCTTTTGCTCCTGCCAGTTGCATTGCTGTTCCCAATACATACTTTAGCTCTATAGAACAACAAAGAAGAGCTGCCCGAGAAGCCCTAGAGAAGGTCCAACCAGTGTTTGATTTCAACCAGAATCTCGATTCCATGAGGGACTTTGAACAACTAATAAGAGGGGGCAACAAGTAG

mRNA sequence

ATGAAGATGAAGACAGTACAGAAGCAAGAGAGAGTTGTGGGTCATCGCTCAAACGCTAAGGCTCTTTCATGCCAAAAGAAAAGTCATGCAAGCAAATTCACAACTATATTGAAACCGGCTACCGTCATAACCAAGAAAGCTGAACTCACAAATGGTGCTGGTCCAGTTGGTGATGGGTTTGAAAATGTCACCCGAAAAAAGACAAGTGAAGGATCTGAATTCAAAACTCCGCCAGTTGGTGGTGGGTCTAAAAATGTCACCAGAAAGACAAGTGAAGCATATGAATTCAAAACTCCACCCATGTCACCTACCAAGACTGCCCGAGTAATGGGCCTGAAAGCCAGATTTGGTACTACAATTTTGAAAGCTCAACAGGTACTTTTCAATTCTGGAAATACGGCTCCTGCCCCTGCTCCAACTCCAGCTCCAGCTTTTGCTCCTGCCAGTTGCATTGCTGTTCCCAATACATACTTTAGCTCTATAGAACAACAAAGAAGAGCTGCCCGAGAAGCCCTAGAGAAGGTCCAACCAGTGTTTGATTTCAACCAGAATCTCGATTCCATGAGGGACTTTGAACAACTAATAAGAGGGGGCAACAAGTAG

Coding sequence (CDS)

ATGAAGATGAAGACAGTACAGAAGCAAGAGAGAGTTGTGGGTCATCGCTCAAACGCTAAGGCTCTTTCATGCCAAAAGAAAAGTCATGCAAGCAAATTCACAACTATATTGAAACCGGCTACCGTCATAACCAAGAAAGCTGAACTCACAAATGGTGCTGGTCCAGTTGGTGATGGGTTTGAAAATGTCACCCGAAAAAAGACAAGTGAAGGATCTGAATTCAAAACTCCGCCAGTTGGTGGTGGGTCTAAAAATGTCACCAGAAAGACAAGTGAAGCATATGAATTCAAAACTCCACCCATGTCACCTACCAAGACTGCCCGAGTAATGGGCCTGAAAGCCAGATTTGGTACTACAATTTTGAAAGCTCAACAGGTACTTTTCAATTCTGGAAATACGGCTCCTGCCCCTGCTCCAACTCCAGCTCCAGCTTTTGCTCCTGCCAGTTGCATTGCTGTTCCCAATACATACTTTAGCTCTATAGAACAACAAAGAAGAGCTGCCCGAGAAGCCCTAGAGAAGGTCCAACCAGTGTTTGATTTCAACCAGAATCTCGATTCCATGAGGGACTTTGAACAACTAATAAGAGGGGGCAACAAGTAG

Protein sequence

MKMKTVQKQERVVGHRSNAKALSCQKKSHASKFTTILKPATVITKKAELTNGAGPVGDGFENVTRKKTSEGSEFKTPPVGGGSKNVTRKTSEAYEFKTPPMSPTKTARVMGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPNTYFSSIEQQRRAAREALEKVQPVFDFNQNLDSMRDFEQLIRGGNK
Homology
BLAST of MC08g_new0451 vs. NCBI nr
Match: TYK19957.1 (hypothetical protein E5676_scaffold134G00700 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 5.64e-17
Identity = 58/147 (39.46%), Postives = 84/147 (57.14%), Query Frame = 0

Query: 56  VGDGFENVTRKKTS----EGSEFKTPPVGGGSKNVTRKTSEAYEFKTP--PMSPTKTARV 115
           VG+ +  + + K S    E ++F++P     SKN    T    + KT    +SP + ARV
Sbjct: 29  VGELYTAIHQTKKSNSNHELAKFESP----SSKNNNSPTLSPKKTKTTIIVLSPRQAARV 88

Query: 116 MGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPNTYFSSIEQQRRAAR 175
             LK +FG+TILKAQQ L N  +                  + V      SI++QRRA+R
Sbjct: 89  EMLKEKFGSTILKAQQKLSNKDSNI-------------YKYVVVEAPKVCSIQEQRRASR 148

Query: 176 EALEKVQPVFDFNQNLDSMRDFEQLIR 196
           E+L+K++PVFDFN+NLDSMRDFE+L++
Sbjct: 149 ESLDKIKPVFDFNENLDSMRDFEELLK 158

BLAST of MC08g_new0451 vs. NCBI nr
Match: KAA0064635.1 (hypothetical protein E6C27_scaffold255G003590 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 5.64e-17
Identity = 58/147 (39.46%), Postives = 84/147 (57.14%), Query Frame = 0

Query: 56  VGDGFENVTRKKTS----EGSEFKTPPVGGGSKNVTRKTSEAYEFKTP--PMSPTKTARV 115
           VG+ +  + + K S    E ++F++P     SKN    T    + KT    +SP + ARV
Sbjct: 29  VGELYTAIHQTKKSNSNHELAKFESP----SSKNNNSTTLSPKKTKTTIIVLSPRQAARV 88

Query: 116 MGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPNTYFSSIEQQRRAAR 175
             LK +FG+TILKAQQ L N  +                  + V      SI++QRRA+R
Sbjct: 89  EMLKEKFGSTILKAQQKLSNKDSNI-------------YKYVVVEAPKVCSIQEQRRASR 148

Query: 176 EALEKVQPVFDFNQNLDSMRDFEQLIR 196
           E+L+K++PVFDFN+NLDSMRDFE+L++
Sbjct: 149 ESLDKIKPVFDFNENLDSMRDFEELLK 158

BLAST of MC08g_new0451 vs. NCBI nr
Match: KAE8647905.1 (hypothetical protein Csa_000421, partial [Cucumis sativus])

HSP 1 Score: 84.7 bits (208), Expect = 9.36e-17
Identity = 62/163 (38.04%), Postives = 86/163 (52.76%), Query Frame = 0

Query: 36  ILKPATVITKKAELTNGAGPVGDGFENVTRKKTSEGSEFKTPPVGGGSKNVTRKTSEAYE 95
           +LKP  + TK   +T    P    ++    K   E + FK P      KN          
Sbjct: 20  VLKPKVLSTK---VTTAMKPYNI-YQRKESKSDRELANFKCPSP---KKNNIELLPVKPN 79

Query: 96  FKTPPMSPTKTARVMGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPN 155
                +SP + ARV  LKA+FG+TILKAQQ L NS N +          +      A P 
Sbjct: 80  TTIVVLSPRRAARVEVLKAKFGSTILKAQQKLQNSNNDSNK--------YEYVVVGATPK 139

Query: 156 TYFSSIEQQRRAAREALEKVQPVFDFNQNLDSMRDFEQLIRGG 198
           T  S +++Q+RA+REAL+K+ PVFDFN+NLDSMR+FE+++  G
Sbjct: 140 TC-SILQEQKRASREALDKINPVFDFNENLDSMREFEKILESG 166

BLAST of MC08g_new0451 vs. NCBI nr
Match: KGN61401.2 (hypothetical protein Csa_006690, partial [Cucumis sativus])

HSP 1 Score: 80.1 bits (196), Expect = 5.45e-15
Identity = 59/163 (36.20%), Postives = 85/163 (52.15%), Query Frame = 0

Query: 36  ILKPATVITKKAELTNGAGPVGDGFENVTRKKTSEGSEFKTPPVGGGSKNVTRKTSEAYE 95
           +LKP  + TK   +T    P    +    RK+++   E          KN          
Sbjct: 20  VLKPKVLSTK---VTTAMKP----YNIYQRKESNSDRELANFKCPSPKKNNIELLPIKPN 79

Query: 96  FKTPPMSPTKTARVMGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPN 155
                +SP + ARV  LKA+FG+TILKAQQ L NS N +         A  P +C     
Sbjct: 80  TTIVVLSPRRAARVEVLKAKFGSTILKAQQKLQNSNNDSNKYEYVVVGA-TPKAC----- 139

Query: 156 TYFSSIEQQRRAAREALEKVQPVFDFNQNLDSMRDFEQLIRGG 198
              S +++Q+RA+REAL+K+ PVF+FN+NLDSMR+FE+++  G
Sbjct: 140 ---SILQEQKRASREALDKINPVFNFNENLDSMREFEKILESG 166

BLAST of MC08g_new0451 vs. NCBI nr
Match: KAG6589050.1 (hypothetical protein SDJN03_17615, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.8 bits (177), Expect = 8.87e-12
Identity = 61/164 (37.20%), Postives = 82/164 (50.00%), Query Frame = 0

Query: 68  TSEGSEFKTPPVGGGSKNVTRKTSEAYEFKTPPM-------SPTKTARVMGLKARFGTTI 127
           +S  + F  P +   + N++   S+   FKTPP+       SPTKTARV  LK +F  TI
Sbjct: 22  SSNVTTFLRPSIADRT-NISNGDSKPSLFKTPPIRTTAQVSSPTKTARVEMLKNKFSNTI 81

Query: 128 LKAQQVLFNSGNTA---PAPAPTPAPAFAPASCIAVPNTY-----------FSSIEQ--- 187
            KAQQ L +    A     P   P    A A  + VPN +           FS+IEQ   
Sbjct: 82  SKAQQALQSKHKIARKVAVPKKLPEQKRA-APNVVVPNVWSTKQKRAARKAFSTIEQKQA 141

Query: 188 ---------QRRAAREALEKVQPVFDFNQNLDSMRDFEQLIRGG 198
                    QRRA+REAL+ V+P  +FN+NLD M++FE L+  G
Sbjct: 142 SPKEYSVREQRRASREALDAVKPTCNFNENLDVMKEFENLLTNG 183

BLAST of MC08g_new0451 vs. ExPASy TrEMBL
Match: A0A5A7VFH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003590 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.73e-17
Identity = 58/147 (39.46%), Postives = 84/147 (57.14%), Query Frame = 0

Query: 56  VGDGFENVTRKKTS----EGSEFKTPPVGGGSKNVTRKTSEAYEFKTP--PMSPTKTARV 115
           VG+ +  + + K S    E ++F++P     SKN    T    + KT    +SP + ARV
Sbjct: 29  VGELYTAIHQTKKSNSNHELAKFESP----SSKNNNSTTLSPKKTKTTIIVLSPRQAARV 88

Query: 116 MGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPNTYFSSIEQQRRAAR 175
             LK +FG+TILKAQQ L N  +                  + V      SI++QRRA+R
Sbjct: 89  EMLKEKFGSTILKAQQKLSNKDSNI-------------YKYVVVEAPKVCSIQEQRRASR 148

Query: 176 EALEKVQPVFDFNQNLDSMRDFEQLIR 196
           E+L+K++PVFDFN+NLDSMRDFE+L++
Sbjct: 149 ESLDKIKPVFDFNENLDSMRDFEELLK 158

BLAST of MC08g_new0451 vs. ExPASy TrEMBL
Match: A0A5D3D8Q3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00700 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.73e-17
Identity = 58/147 (39.46%), Postives = 84/147 (57.14%), Query Frame = 0

Query: 56  VGDGFENVTRKKTS----EGSEFKTPPVGGGSKNVTRKTSEAYEFKTP--PMSPTKTARV 115
           VG+ +  + + K S    E ++F++P     SKN    T    + KT    +SP + ARV
Sbjct: 29  VGELYTAIHQTKKSNSNHELAKFESP----SSKNNNSPTLSPKKTKTTIIVLSPRQAARV 88

Query: 116 MGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPNTYFSSIEQQRRAAR 175
             LK +FG+TILKAQQ L N  +                  + V      SI++QRRA+R
Sbjct: 89  EMLKEKFGSTILKAQQKLSNKDSNI-------------YKYVVVEAPKVCSIQEQRRASR 148

Query: 176 EALEKVQPVFDFNQNLDSMRDFEQLIR 196
           E+L+K++PVFDFN+NLDSMRDFE+L++
Sbjct: 149 ESLDKIKPVFDFNENLDSMRDFEELLK 158

BLAST of MC08g_new0451 vs. ExPASy TrEMBL
Match: A0A0A0KRB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162640 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.14e-14
Identity = 45/95 (47.37%), Postives = 59/95 (62.11%), Query Frame = 0

Query: 101 MSPTKTARVMGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPNTYFSS 160
           +SP + ARV  LKA+FG+TILKAQQ L NS N +                I        S
Sbjct: 43  LSPRRAARVEVLKAKFGSTILKAQQKLHNSNNDSNKH-----------EYIVGATPNICS 102

Query: 161 IEQQRRAAREALEKVQPVFDFNQNLDSMRDFEQLI 195
           I++QR+A REAL+K+ P FDFN+NLDSMR+F +L+
Sbjct: 103 IQEQRQALREALDKINPAFDFNENLDSMREFAKLL 126

BLAST of MC08g_new0451 vs. ExPASy TrEMBL
Match: A0A0A0KMZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G164650 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 8.00e-11
Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 0

Query: 101 MSPTKTARVMGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPNTYFSS 160
           +SP + ARV  LKA+FG+TI KAQQ L  S N +          +      A P T  S 
Sbjct: 73  LSPRRAARVEVLKAKFGSTIWKAQQKLQKSNNDSNK--------YEYVVIGATPKTC-SI 132

Query: 161 IEQQRRAAREALEK-VQPVFDFNQNLDSMRDFEQ 193
           +++Q+RA+REAL+K + PVFDFN+NLDSM++FE+
Sbjct: 133 LQEQKRASREALDKMINPVFDFNENLDSMKEFER 157

BLAST of MC08g_new0451 vs. ExPASy TrEMBL
Match: A0A6J5THZ9 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS2845 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.95e-05
Identity = 36/99 (36.36%), Postives = 50/99 (50.51%), Query Frame = 0

Query: 101 MSPTKTARVMGLKARFGTTILKAQQVLFNSGNTAPAPAPTPAPAFAPASCIAVPNTYFSS 160
           +SP + ARV  LKARF  TI KA+Q +  SG+            F  A  +   +     
Sbjct: 58  LSPRRAARVAMLKARFAGTIFKAKQEVLYSGSNGLENTEDEIKKFRAAEMMKANDYIKEQ 117

Query: 161 IEQQRRAAREALEKVQPVFDFNQNLDSMRDFEQLIRGGN 199
            ++ R AAR ALE+++     + N  +MRDFE LI G N
Sbjct: 118 RQRDREAARLALEEMERNVVIDDNFKTMRDFEMLISGAN 156

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
TYK19957.15.64e-1739.46hypothetical protein E5676_scaffold134G00700 [Cucumis melo var. makuwa][more]
KAA0064635.15.64e-1739.46hypothetical protein E6C27_scaffold255G003590 [Cucumis melo var. makuwa][more]
KAE8647905.19.36e-1738.04hypothetical protein Csa_000421, partial [Cucumis sativus][more]
KGN61401.25.45e-1536.20hypothetical protein Csa_006690, partial [Cucumis sativus][more]
KAG6589050.18.87e-1237.20hypothetical protein SDJN03_17615, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A5A7VFH72.73e-1739.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3D8Q32.73e-1739.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KRB61.14e-1447.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162640 PE=4 SV=1[more]
A0A0A0KMZ18.00e-1146.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G164650 PE=4 SV=1[more]
A0A6J5THZ96.95e-0536.36Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS2845 PE=4 SV... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g_new0451.1MC08g_new0451.1mRNA