MC08g_new0447 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g_new0447
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Location	MC08: 22169699 .. 22170723 (+)
RNA-Seq Expression	MC08g_new0447
Synteny	MC08g_new0447

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACAACACAATTATTTAAGAGTATATCAAACAAGTACAAATTCCAACATGACCTCTCTACTTTAGAATAACTCAACACTAACTTGGAAAGCAATAATATACTATATTCAGCAACAATCAAACACTTTTATATTAACACCCTTCCACCGGTACTTGTGGATTCAAAGGGACAAGAAGAGGGACACCATTTGCCGCTCAAACCGCAGCAGGAAATGCTATTCGGGCAGTAGTGGATCAGGGTATGCAACGAGCGGAAGTCATGATAAAGGGCCCAGGTCTCGGAAGAGATGCAGCATTAAGAGCTATTCGTAGAAGCGGTATACTCTTAAGTTTCATACGGGATGTAACCCCTATGCCACATAATGGCTGTAGGCCCCCTAAAAAACGACGTGTGTAAAAATAAACATTGAAGAGAAATTTCAAGAGAAATAAATAATTCAATGATTTGATCAAAAAAATATTACTATGGTTCGGGAGAAAATAAGAGTATCAACTCGGACACTAAAGTGGAAGTGTGTTGAATCAAGAGCAGACAGNATGTTTCTATTCAGCGGGCGTGGTTATTGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTCCAAGGACGTGCTGTAGGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCGTTCTTCTTAGCAAGAATTATTGCAGTCGGATAATGGCTAGGAGGATTTGAAAGGCATTATGGCACTAAGATTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACAGCAACAGTCAAATACTTCTATAATACTCCAAAACTAATATGTTATGCAGTACTACCATGTATACACCATTCAAACTTCTACATATTATAAACAAGACAAAGTATTTCTAATCTACCAAGTACTAGACAGAAAGTAGTCTAAACCAAATACTTACATCAAATAAACAAAACTAATGAATCCACAGGTACTACACAAATCGTCC

mRNA sequence

ATGGTTCGGGAGAAAATAAGAGTATCAACTCGGACACTAAAGTGGAAGTGTGTTGAATCAAGAGCAGACAGNATGTTTCTATTCAGCGGGCGTGGTTATTGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTCCAAGGACGTGCTGTAGGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCGTTCTTCTTAGCAAGAATTATTGCAGTCGGATAA

Coding sequence (CDS)

ATGGTTCGGGAGAAAATAAGAGTATCAACTCGGACACTAAAGTGGAAGTGTGTTGAATCAAGAGCAGACAGNATGTTTCTATTCAGCGGGCGTGGTTATTGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTCCAAGGACGTGCTGTAGGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCGTTCTTCTTAGCAAGAATTATTGCAGTCGGATAA

Protein sequence

MVREKIRVSTRTLKWKCVESRADXMFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

Homology

[Close]

BLAST of MC08g_new0447 vs. ExPASy Swiss-Prot
Match: Q3V534 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Acorus calamus OX=4465 GN=psaA PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.5e-32
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25  MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
           MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF
Sbjct: 683 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 742

Query: 85  LARIIAVG 93
           LARIIAVG
Sbjct: 743 LARIIAVG 750

[Close]

BLAST of MC08g_new0447 vs. ExPASy Swiss-Prot
Match: A4QJB5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Aethionema cordifolium OX=434059 GN=psaA PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.5e-32
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25  MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
           MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF
Sbjct: 683 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 742

Query: 85  LARIIAVG 93
           LARIIAVG
Sbjct: 743 LARIIAVG 750

[Close]

BLAST of MC08g_new0447 vs. ExPASy Swiss-Prot
Match: A4QJJ9 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Aethionema grandiflorum OX=72657 GN=psaA PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.5e-32
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25  MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
           MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF
Sbjct: 683 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 742

Query: 85  LARIIAVG 93
           LARIIAVG
Sbjct: 743 LARIIAVG 750

[Close]

BLAST of MC08g_new0447 vs. ExPASy Swiss-Prot
Match: Q70Y03 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Amborella trichopoda OX=13333 GN=psaA PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.5e-32
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25  MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
           MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF
Sbjct: 683 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 742

Query: 85  LARIIAVG 93
           LARIIAVG
Sbjct: 743 LARIIAVG 750

[Close]

BLAST of MC08g_new0447 vs. ExPASy Swiss-Prot
Match: A4QK18 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Arabis hirsuta OX=78191 GN=psaA PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.5e-32
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25  MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
           MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF
Sbjct: 683 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 742

Query: 85  LARIIAVG 93
           LARIIAVG
Sbjct: 743 LARIIAVG 750

[Close]

BLAST of MC08g_new0447 vs. NCBI nr
Match: KAE9610981.1 (Photosystem I P700 chlorophyll a apoprotein A1 [Lupinus albus] >KAF6149235.1 hypothetical protein GIB67_026091 [Kingdonia uniflora] >KAF7800415.1 photosystem I P700 apoprotein A1 [Senna tora] >RHN59621.1 Photosystem I P700 chlorophyll a apoprotein A1 [Medicago truncatula] >RYQ91278.1 hypothetical protein Ahy_B09g097168 isoform B [Arachis hypogaea] >TYH01493.1 hypothetical protein ES288_A09G063200v1 [Gossypium darwinii] >GFP81999.1 photosystem i p700 chlorophyll a apoprotein a1 [Phtheirospermum japonicum])

HSP 1 Score: 139 bits (351), Expect = 3.59e-41
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
          MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF
Sbjct: 1  MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 60

Query: 85 LARIIAVG 92
          LARIIAVG
Sbjct: 61 LARIIAVG 68

[Close]

BLAST of MC08g_new0447 vs. NCBI nr
Match: SSD63113.1 (photosystem I P700 chlorophyll a apoprotein A1 [Saccharum spontaneum] >SSW94397.1 photosystem I P700 chlorophyll a apoprotein A1 [Saccharum hybrid cultivar] >SSX08182.1 photosystem I P700 chlorophyll a apoprotein A1 [Saccharum hybrid cultivar SP70-1143] >DAC80993.1 TPA_asm: photosystem I P700 apoprotein A1 [Saccharum hybrid cultivar B4362] >SSW93842.1 photosystem I P700 chlorophyll a apoprotein A1 [Saccharum spontaneum])

HSP 1 Score: 139 bits (350), Expect = 5.09e-41
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
          MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSI+QGRAVGVTHYLLGGIATTWAFF
Sbjct: 1  MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIIQGRAVGVTHYLLGGIATTWAFF 60

Query: 85 LARIIAVG 92
          LARIIAVG
Sbjct: 61 LARIIAVG 68

[Close]

BLAST of MC08g_new0447 vs. NCBI nr
Match: MQL94995.1 (hypothetical protein [Colocasia esculenta])

HSP 1 Score: 139 bits (351), Expect = 5.67e-41
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
          MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF
Sbjct: 17 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 76

Query: 85 LARIIAVG 92
          LARIIAVG
Sbjct: 77 LARIIAVG 84

[Close]

BLAST of MC08g_new0447 vs. NCBI nr
Match: AFZ63851.1 (photosystem I P700 apoprotein A1, partial [Hydrilla verticillata])

HSP 1 Score: 139 bits (351), Expect = 5.84e-41
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
          MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF
Sbjct: 18 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 77

Query: 85 LARIIAVG 92
          LARIIAVG
Sbjct: 78 LARIIAVG 85

[Close]

BLAST of MC08g_new0447 vs. NCBI nr
Match: AFZ63809.1 (photosystem I P700 apoprotein A1, partial [Ceratostema silvicola] >AFZ63811.1 photosystem I P700 apoprotein A1, partial [Hedychium horsfieldii] >AFZ63813.1 photosystem I P700 apoprotein A1, partial [Egeria densa] >AFZ63815.1 photosystem I P700 apoprotein A1, partial [Celastrus orbiculatus] >AFZ63817.1 photosystem I P700 apoprotein A1, partial [Humulus lupulus] >AFZ63821.1 photosystem I P700 apoprotein A1, partial [Najas guadalupensis] >AFZ63825.1 photosystem I P700 apoprotein A1, partial [Hibbertia scandens] >AFZ63827.1 photosystem I P700 apoprotein A1, partial [Najas wrightiana] >AFZ63833.1 photosystem I P700 apoprotein A1, partial [Aponogeton longiplumulosus] >AFZ63835.1 photosystem I P700 apoprotein A1, partial [Astonia australiensis] >AFZ63837.1 photosystem I P700 apoprotein A1, partial [Stratiotes aloides] >AFZ63839.1 photosystem I P700 apoprotein A1, partial [Potamogeton foliosus] >AFZ63841.1 photosystem I P700 apoprotein A1, partial [Alvaradoa amorphoides] >AFZ63843.1 photosystem I P700 apoprotein A1, partial [Carica papaya] >AFZ63845.1 photosystem I P700 apoprotein A1, partial [Posidonia denhartogii] >AFZ63847.1 photosystem I P700 apoprotein A1, partial [Potamogeton vaseyi] >AFZ63849.1 photosystem I P700 apoprotein A1, partial [Sagittaria montevidensis] >AFZ63853.1 photosystem I P700 apoprotein A1, partial [Heliotropium arborescens] >AFZ63855.1 photosystem I P700 apoprotein A1, partial [Potamogeton obtusifolius] >AFZ63857.1 photosystem I P700 apoprotein A1, partial [Stachyurus chinensis] >AFZ63859.1 photosystem I P700 apoprotein A1, partial [Najas marina] >AFZ63861.1 photosystem I P700 apoprotein A1, partial [Najas flexilis] >AFZ63865.1 photosystem I P700 apoprotein A1, partial [Enhalus acoroides] >AFZ63869.1 photosystem I P700 apoprotein A1, partial [Ruppia megacarpa] >AFZ63871.1 photosystem I P700 apoprotein A1, partial [Butomus umbellatus] >AFZ63873.1 photosystem I P700 apoprotein A1, partial [Gymnosporia senegalensis] >AFZ63877.1 photosystem I P700 apoprotein A1, partial [Gunnera masafuerae] >AFZ63879.1 photosystem I P700 apoprotein A1, partial [Cornus kousa] >AFZ63883.1 photosystem I P700 apoprotein A1, partial [Ottelia ulvifolia] >AFZ63889.1 photosystem I P700 apoprotein A1, partial [Escallonia rubra] >AFZ63893.1 photosystem I P700 apoprotein A1, partial [Trochodendron aralioides] >AFZ63895.1 photosystem I P700 apoprotein A1, partial [Najas minor] >AFZ63897.1 photosystem I P700 apoprotein A1, partial [Gunnera prorepens] >AFZ63903.1 photosystem I P700 apoprotein A1, partial [Gunnera peltata] >AFZ63905.1 photosystem I P700 apoprotein A1, partial [Cycnogeton procerum] >AFZ63909.1 photosystem I P700 apoprotein A1, partial [Berzelia lanuginosa] >AFZ63911.1 photosystem I P700 apoprotein A1, partial [Moringa oleifera] >AFZ63913.1 photosystem I P700 apoprotein A1, partial [Thalassia testudinum] >AFZ63915.1 photosystem I P700 apoprotein A1, partial [Elodea nuttallii] >AFZ63919.1 photosystem I P700 apoprotein A1, partial [Pandanus caricosus] >AFZ63923.1 photosystem I P700 apoprotein A1, partial [Aucuba japonica] >AFZ63925.1 photosystem I P700 apoprotein A1, partial [Alisma triviale])

HSP 1 Score: 139 bits (351), Expect = 5.84e-41
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
          MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF
Sbjct: 18 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 77

Query: 85 LARIIAVG 92
          LARIIAVG
Sbjct: 78 LARIIAVG 85

[Close]

BLAST of MC08g_new0447 vs. ExPASy TrEMBL
Match: A0A444Z5D3 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B05g077709 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 1.74e-41
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
          MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF
Sbjct: 1  MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 60

Query: 85 LARIIAVG 92
          LARIIAVG
Sbjct: 61 LARIIAVG 68

[Close]

BLAST of MC08g_new0447 vs. ExPASy TrEMBL
Match: A0A6A4QAW2 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Lupinus albus OX=3870 GN=Lalb_Chr07g0192811 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 1.74e-41
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
          MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF
Sbjct: 1  MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 60

Query: 85 LARIIAVG 92
          LARIIAVG
Sbjct: 61 LARIIAVG 68

[Close]

BLAST of MC08g_new0447 vs. ExPASy TrEMBL
Match: A0A5D2F8B4 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A09G063200v1 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 1.74e-41
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
          MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF
Sbjct: 1  MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 60

Query: 85 LARIIAVG 92
          LARIIAVG
Sbjct: 61 LARIIAVG 68

[Close]

BLAST of MC08g_new0447 vs. ExPASy TrEMBL
Match: A0A7J7M2W7 (Uncharacterized protein OS=Kingdonia uniflora OX=39325 GN=GIB67_026091 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 1.74e-41
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
          MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF
Sbjct: 1  MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 60

Query: 85 LARIIAVG 92
          LARIIAVG
Sbjct: 61 LARIIAVG 68

[Close]

BLAST of MC08g_new0447 vs. ExPASy TrEMBL
Match: A0A396I499 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr4g0015371 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 1.74e-41
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
          MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF
Sbjct: 1  MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 60

Query: 85 LARIIAVG 92
          LARIIAVG
Sbjct: 61 LARIIAVG 68

[Close]

BLAST of MC08g_new0447 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 139.4 bits (350), Expect = 1.4e-33
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 25  MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFF 84
           MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSI+QGRAVGVTHYLLGGIATTWAFF
Sbjct: 683 MFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIIQGRAVGVTHYLLGGIATTWAFF 742

Query: 85  LARIIAVG 93
           LARIIAVG
Sbjct: 743 LARIIAVG 750

[Close]

BLAST of MC08g_new0447 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 64.7 bits (156), Expect = 4.4e-11
Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 25  MFLFSGRGYWQELIESIVWAHNKLKVAP----ATQPRALSIVQGRAVGVTHYLLGGIATT 84
           MFL S RGYWQELIE++ WAH +  +A       +P ALSIVQ R VG+ H+ +G I T 
Sbjct: 662 MFLISWRGYWQELIETLAWAHERTPLANLIRWKDKPVALSIVQARLVGLAHFSVGYIFTY 721

Query: 85  WAFFLA 87
            AF +A
Sbjct: 722 AAFLIA 727

[Close]

BLAST of MC08g_new0447 vs. TAIR 10
Match: ATCG00740.1 (RNA polymerase subunit alpha )

HSP 1 Score: 48.1 bits (113), Expect = 4.3e-06
Identity = 21/31 (67.74%), Postives = 26/31 (83.87%), Query Frame = 0


Query: 1  MVREKIRVSTRTLKWKCVESRADXMFLFSGR 32
          MVREK++VSTRTL+WKCVES+ D   L+ GR
Sbjct: 1  MVREKVKVSTRTLQWKCVESKRDSKRLYYGR 31

The following BLAST results are available for this feature:

BLAST of MC08g_new0447 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3V534	1.5e-32	100.00	Photosystem I P700 chlorophyll a apoprotein A1 OS=Acorus calamus OX=4465 GN=psaA...	[more]
A4QJB5	1.5e-32	100.00	Photosystem I P700 chlorophyll a apoprotein A1 OS=Aethionema cordifolium OX=4340...	[more]
A4QJJ9	1.5e-32	100.00	Photosystem I P700 chlorophyll a apoprotein A1 OS=Aethionema grandiflorum OX=726...	[more]
Q70Y03	1.5e-32	100.00	Photosystem I P700 chlorophyll a apoprotein A1 OS=Amborella trichopoda OX=13333 ...	[more]
A4QK18	1.5e-32	100.00	Photosystem I P700 chlorophyll a apoprotein A1 OS=Arabis hirsuta OX=78191 GN=psa...	[more]

BLAST of MC08g_new0447 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE9610981.1	3.59e-41	100.00	Photosystem I P700 chlorophyll a apoprotein A1 [Lupinus albus] >KAF6149235.1 hyp...	[more]
SSD63113.1	5.09e-41	98.53	photosystem I P700 chlorophyll a apoprotein A1 [Saccharum spontaneum] >SSW94397....	[more]
MQL94995.1	5.67e-41	100.00	hypothetical protein [Colocasia esculenta]	[more]
AFZ63851.1	5.84e-41	100.00	photosystem I P700 apoprotein A1, partial [Hydrilla verticillata]	[more]
AFZ63809.1	5.84e-41	100.00	photosystem I P700 apoprotein A1, partial [Ceratostema silvicola] >AFZ63811.1 ph...	[more]

BLAST of MC08g_new0447 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A444Z5D3	1.74e-41	100.00	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B05g077709 PE=4 SV=1	[more]
A0A6A4QAW2	1.74e-41	100.00	Photosystem I P700 chlorophyll a apoprotein A1 OS=Lupinus albus OX=3870 GN=Lalb_...	[more]
A0A5D2F8B4	1.74e-41	100.00	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A09G063200v1 PE=...	[more]
A0A7J7M2W7	1.74e-41	100.00	Uncharacterized protein OS=Kingdonia uniflora OX=39325 GN=GIB67_026091 PE=4 SV=1	[more]
A0A396I499	1.74e-41	100.00	Photosystem I P700 chlorophyll a apoprotein A1 OS=Medicago truncatula OX=3880 GN...	[more]

BLAST of MC08g_new0447 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00350.1	1.4e-33	98.53	Photosystem I, PsaA/PsaB protein	[more]
ATCG00340.1	4.4e-11	51.52	Photosystem I, PsaA/PsaB protein	[more]
ATCG00740.1	4.3e-06	67.74	RNA polymerase subunit alpha	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001280	Photosystem I PsaA/PsaB	PFAM	PF00223	PsaA_PsaB	coord: 22..85 e-value: 1.1E-33 score: 116.4
IPR036408	Photosystem I PsaA/PsaB superfamily	GENE3D	1.20.1130.10	Photosystem I PsaA/PsaB	coord: 21..91 e-value: 8.0E-39 score: 135.0
IPR036408	Photosystem I PsaA/PsaB superfamily	SUPERFAMILY	81558	Photosystem I subunits PsaA/PsaB	coord: 24..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g_new0447.1	MC08g_new0447.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0046872	metal ion binding