MC08g_new0406 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g_new0406
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 20255057 .. 20258109 (-)
RNA-Seq ExpressionMC08g_new0406
SyntenyMC08g_new0406
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCGAGCAGAGGCTGCCTCCTACTACAACAGGATCGTTGAGTTGGAGTTGCACCTCTTGGACGCTGAGGATAAGTCGTTTAAGGCAGAAGAGGGGCGAGCCGTAGTCGAATTCGACTTGTCGAAGTCCAAGGAGGCTGAGAAGACAATCTTGTACTGTTTAGGACGAGAATACACTCGGTCTGCCAGCCTTGAGGTTGCTTTGGCTGGTGCGGAGTGTTCTCTTGCTCAGGTTCGAGAAGAATTACAGTCAGTGGGGGCAATCTTGGACGTTCCTGAGCTGTTGGAGTCCCATTTTCGTGGCTCGATTGTCTTTTGCGCATCAGAAAAAAGACCTTCAACAGGCAGGCTTTGATTTCATGAGGGTCCATCTATAGGGCCGGTGTCCGAATGAAGAATTGAAGCATGTTCTTGACGCTCTTAACGCTTCTAGTCTACTCTTGGCAGCTGCGACTCTAAAGAACATCTCTAGCATCTTGTCTCTAAAGGCCACAGTTATCATGACGCCTTGGTACATCAGGTTTCCAATGGCTTGCTCGCGGTCAAGTGGTGCCACATGGGTTATCCGGACTTGGGGGCAGCCTTCGAACTTGGAGCGTTTTCAAAAGGTAGGATTACGTCTGATTGGGAGCCGTAGCTAGGTCCTCCGCTCGGGAAATTCCTTGGAATATTAGGTCTCTAGAGGCTTGCTATCGGCCAAGTGATGTCACGTGAGCTATCCAAACTCGGGGGCAGCTTTGGATCTTTAAGTGTTCCGACAGGCTGCCAGTGACGCGGTGCTCCATATCAATTTCTTACATGTCATTGTACTTATTTACTGATCCGAAGATGCTGTCAATCATCCTCAGGGCACGTTCCCACAACCATCACCACTTTTGTGTTATTTTTGCCATTATGTCATGTGCACTTTGAGGCGCCTTCGCTGGGTCCTGTAGTACGTCGTTTCATTTGCCTTAGAATGTGAGGCGATGTGCTTCTATCGAAAAGACACTTGGAAGTTTGATACAATGGCTAGGGGTCACTACTTTATCCTTTAAATTGAGAGTTTGCCCTCGTCCTTGTCGTCATTTCTCTTCCTCTTTCATTCCCTCCGATTCACCCCGACAACAAGAAATGTATGGATCCTTCAACAGCGACCCCATTGAAGTTGACACTCCTTTGGAGAACGACCCTACCTTTCCGGAGGGGCACATTCTGGATGGGGATGAGGACTAGCTTTTCTCTAATGGGGAACATGCTTCTTCAGAGGAGGAAGACTATGTGGTTTCAGATGGTGGGTATCCCTTCGAAGAAGAAGATGGTGCTGGTGAGGAAAATGCTGAGGAGGAGGACTGTGAAGAAGAAACAGGTAGGGAGGAAGATGGTGGGCCTTCAAACGAGGCAGCAGGTCTTCTAGACCTTTGAATCGTCCCGTCCTGGACCCTTCCCGATCTTGCCCAACTGAGTAAGAACGAACCGATTGCGCGGGTTTGCAGACTGAAGTGCGACCATCACAAACTGAAGGAGGAGAATGTTGACACAGAGAACGACCGCCATTTTGCCATTGAGATGATATGAGAAGTCCTCCAAGAAATGGAGGAGATTGAGCAAGCTTACCAGGCGCTTTTCCATAGGTTTAGACGTCTGGAGAGGAGGATGGCTCGTCATGCGCCTACATACTGACTCCTCCGCCGCTTTTATTCTTCATGACTCTTGTATTATGATGTTCTTTGGTGGCGTTGCTCCCTTTTTTTTTTGTATGTAATCAAATGAGGGGGTCAATGGCTTCCTCCTATTGTTAATGAAATTTCCTTTCTTCCAAGTTACCCTTGTACTCTTTTTTACATTCGCACGCTCGCTTATTTCCACACGTTGGACTTTTTTTTTTATTTTTTGGCAGTTTAAACGAATCTCGAGGTAACTTTCGCATGTATAATGACAGGTTTGCCCTGGTGGGGTTTTCCAGTTTGACTATAAAAGGAGGTGGGGCTTTGGTTCCCTCCCATTCTCATAACTTCAAGCTTTTCTTTTCCAATATACTTTTTCCATGGAAGTTTTCCCAGGCCAACAGGACCTTAAAGACCGCATCTACCGTCTGCTTCTGGCCTGGTCCCATTTTCATGATAGTAAGCACCTAGATCCGAAACGTGTGAGAGCGGTAGCCAATAGGCGCGCTCGCCCTGTGGGAGCGTACAGATGGCTACATTTTTATTATAGTTGGGTACACATAGTCGCTCAATGGTCAAGCGAGCCACGTATGCCTTCAAGTCTTCGTTGGGCTTCTACTTGACGGACTCGAGGTGGACCTCCGTCCTTCAGTTGATGCAAGAGTAGTGGAACTGATCGACGAACTTTCAGGCTAGATCTTGGTAGCTTCCAAACGAGTACTGAGGGGAGGTTTTGGAACCATTGTCGAGCAGGGCCTATAAGGGTCCTAGAGAAGTCTCAATATTGCTCTGCGTCATTGTACCTGGCTTGTCGCATAGCATCGTGGTACAACGTGGCGTGGTCCACAAGATCAGCTGACCTGTCATATTTGTTAATGCAGAGGCCCTTGAATCCCTTCGAGAGTTCCACAGCTAGGATATTGGCCGTGAACGGCTCTTGAGCAATTTTGGATGGTTCGTACTAGGTGGTGGGTCCGTCACCTCCTATTCCAAGCTCAATTCTCACCCGATTGAAGATCTCTTCTTTTACACAGTCCAGTTCCTCCTGCTGATCCCGACTTGAGACCTGCTCGGCCTGTTAGAAGTCTCGGTACTGGTTTGAGATTCTACATTGGAGGTGATCACTCCGCGCTTGGGGTGATTCTTATTGAGCTTATCACGAAGGTCTTTTGATCCTTCGGAGAGCCCTAGTGCCGCTAAGAGGTCCTCGTTGGTGTGTCCGCGTCTTGGTGGGGTCCAGAACTCTCTTTTAGCTACTTCCCCTTCGATCACGCTCTTGTTGGGAGTGGGAAGGGTTCCACGAGTTCAGTCGCCCAGGACGACCTCGATTAAATTCCCCATTTGGGGGGCCATTGGAGCACTAGCGGCCTGCATCTCGTTGCAGATTCTTGAGCTCTTACGATAA

mRNA sequence

ATGGTTCGAGCAGAGGCTGCCTCCTACTACAACAGGATCGTTGAGTTGGAGTTGCACCTCTTGGACGCTGAGGATAAGTCGTTTAAGGCAGAAGAGGGGCGAGCCGTAGTCGAATTCGACTTGTCGAAGTCCAAGGAGGCTGAGAAGACAATCTTGTACTGTTTAGGACGAGAATACACTCGGTCTGCCAGCCTTGAGGTTGCTTTGGCTGGTGCGGAGTGTTCTCTTGCTCAGGGCCGGTGTCCGAATGAAGAATTGAAGCATGTTCTTGACGCTCTTAACGCTTCTAGTCTACTCTTGGCAGCTGCGACTCTAAAGAACATCTCTAGCATCTTGTCTCTAAAGGCCACAGTTATCATGACGCCTTGGTACATCAGGTTTCCAATGGCTTGCTCGCGGTCAAGTGGTGCCACATGGGTTATCCGGACTTGGGGGCAGCCTTCGAACTTGGAGCGTTTTCAAAAGCTTTTCTCTAATGGGGAACATGCTTCTTCAGAGGAGGAAGACTATGTGGTTTCAGATGGTGGGTATCCCTTCGAAGAAGAAGATGGTGCTGGTGAGGAAAATGCTGAGGAGGAGGACTGTGAAGAAGAAACAGGTAGGGAGGAAGATGGTGGGCCTTCAAACGAGGCAGCAGGGCCTATAAGGGTCCTAGAGAAGTCTCAATATTGCTCTGCGTCATTGTACCTGGCTTGTCGCATAGCATCGTGTCCAGTTCCTCCTGCTGATCCCGACTTGAGACCTGCTCGGCCTGTTAGAAGTCTCGGTACTGGTTTGAGATTCTACATTGGAGGTGATCACTCCGCGCTTGGGGTGATTCTTATTGAGCTTATCACGAAGAACTCTCTTTTAGCTACTTCCCCTTCGATCACGCTCTTGTTGGGAGTGGGAAGGGTTCCACGAGTTCAGTCGCCCAGGACGACCTCGATTAAATTCCCCATTTGGGGGGCCATTGGAGCACTAGCGGCCTGCATCTCGTTGCAGATTCTTGAGCTCTTACGATAA

Coding sequence (CDS)

ATGGTTCGAGCAGAGGCTGCCTCCTACTACAACAGGATCGTTGAGTTGGAGTTGCACCTCTTGGACGCTGAGGATAAGTCGTTTAAGGCAGAAGAGGGGCGAGCCGTAGTCGAATTCGACTTGTCGAAGTCCAAGGAGGCTGAGAAGACAATCTTGTACTGTTTAGGACGAGAATACACTCGGTCTGCCAGCCTTGAGGTTGCTTTGGCTGGTGCGGAGTGTTCTCTTGCTCAGGGCCGGTGTCCGAATGAAGAATTGAAGCATGTTCTTGACGCTCTTAACGCTTCTAGTCTACTCTTGGCAGCTGCGACTCTAAAGAACATCTCTAGCATCTTGTCTCTAAAGGCCACAGTTATCATGACGCCTTGGTACATCAGGTTTCCAATGGCTTGCTCGCGGTCAAGTGGTGCCACATGGGTTATCCGGACTTGGGGGCAGCCTTCGAACTTGGAGCGTTTTCAAAAGCTTTTCTCTAATGGGGAACATGCTTCTTCAGAGGAGGAAGACTATGTGGTTTCAGATGGTGGGTATCCCTTCGAAGAAGAAGATGGTGCTGGTGAGGAAAATGCTGAGGAGGAGGACTGTGAAGAAGAAACAGGTAGGGAGGAAGATGGTGGGCCTTCAAACGAGGCAGCAGGGCCTATAAGGGTCCTAGAGAAGTCTCAATATTGCTCTGCGTCATTGTACCTGGCTTGTCGCATAGCATCGTGTCCAGTTCCTCCTGCTGATCCCGACTTGAGACCTGCTCGGCCTGTTAGAAGTCTCGGTACTGGTTTGAGATTCTACATTGGAGGTGATCACTCCGCGCTTGGGGTGATTCTTATTGAGCTTATCACGAAGAACTCTCTTTTAGCTACTTCCCCTTCGATCACGCTCTTGTTGGGAGTGGGAAGGGTTCCACGAGTTCAGTCGCCCAGGACGACCTCGATTAAATTCCCCATTTGGGGGGCCATTGGAGCACTAGCGGCCTGCATCTCGTTGCAGATTCTTGAGCTCTTACGATAA

Protein sequence

MVRAEAASYYNRIVELELHLLDAEDKSFKAEEGRAVVEFDLSKSKEAEKTILYCLGREYTRSASLEVALAGAECSLAQGRCPNEELKHVLDALNASSLLLAAATLKNISSILSLKATVIMTPWYIRFPMACSRSSGATWVIRTWGQPSNLERFQKLFSNGEHASSEEEDYVVSDGGYPFEEEDGAGEENAEEEDCEEETGREEDGGPSNEAAGPIRVLEKSQYCSASLYLACRIASCPVPPADPDLRPARPVRSLGTGLRFYIGGDHSALGVILIELITKNSLLATSPSITLLLGVGRVPRVQSPRTTSIKFPIWGAIGALAACISLQILELLR
Homology
[Close]
BLAST of MC08g_new0406 vs. NCBI nr
Match: XP_022149800.1 (uncharacterized protein LOC111018146 [Momordica charantia])

HSP 1 Score: 66.2 bits (160), Expect = 8.07e-09
Identity = 40/69 (57.97%), Postives = 46/69 (66.67%), Query Frame = 0 

Query: 1   MVRAEAASYYNRIVELELHLLDAEDKSFKAEEGRAVVEFDLSKSKEAEKTILYCLGREYT 60
           M +AEA     RI ELE  LLDAED+ FKAEEG  + E DL KSKEAE T L  LGRE  
Sbjct: 65  MAKAEAFVCDARIAELESRLLDAEDRLFKAEEGDPLAESDLVKSKEAEGTTLDSLGRESA 124

Query: 61  RSASLEVAL 69
            + SL++AL
Sbjct: 125 SATSLKIAL 133

[Close]
BLAST of MC08g_new0406 vs. ExPASy TrEMBL
Match: A0A6J1D6R6 (uncharacterized protein LOC111018146 OS=Momordica charantia OX=3673 GN=LOC111018146 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.91e-09
Identity = 40/69 (57.97%), Postives = 46/69 (66.67%), Query Frame = 0 

Query: 1   MVRAEAASYYNRIVELELHLLDAEDKSFKAEEGRAVVEFDLSKSKEAEKTILYCLGREYT 60
           M +AEA     RI ELE  LLDAED+ FKAEEG  + E DL KSKEAE T L  LGRE  
Sbjct: 65  MAKAEAFVCDARIAELESRLLDAEDRLFKAEEGDPLAESDLVKSKEAEGTTLDSLGRESA 124

Query: 61  RSASLEVAL 69
            + SL++AL
Sbjct: 125 SATSLKIAL 133

The following BLAST results are available for this feature:
BLAST of MC08g_new0406 vs.
Match NameE-valueIdentityDescription
BLAST of MC08g_new0406 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022149800.18.07e-0957.97uncharacterized protein LOC111018146 [Momordica charantia][more]
BLAST of MC08g_new0406 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D6R63.91e-0957.97uncharacterized protein LOC111018146 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
BLAST of MC08g_new0406 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..203

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g_new0406.1MC08g_new0406.1mRNA