MC08g_new0392 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g_new0392
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
LocationMC08: 19799279 .. 19804143 (-)
RNA-Seq ExpressionMC08g_new0392
SyntenyMC08g_new0392
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGATCTTGAGAAAATCAACTAAGTGCACATGGATAAGAGTGAAATTTCCCTCACAATACAGTCATTTCATCAGTGCGCAAGCTTAATCTCGATCAAGTTGAGCTCAACAAATTATCTATTATGAAAATCTCAGGTACTACCACTTGTTCGAAGCTTAGGACTTGAAAATCATATGCTCAACGACAGTCCAACTCAAACAGAAACAATAGACAATGTAGTGACAAATCCGTGAATCAAGCTTGGATCAATAATGATGGCCTATTGACATCTTGGCTCTTGAGAATCATTACCGAAGAAGTTCTAGCTATGATAGAAGGTTTGACACTGCTCATCAAGGTTGGAAATCGTTGGAAAAAACCTTACTCGCTATCACAAAGGAAAATGAAATTCACATAAGTGAATCACTACATTATATTAAAAGATTTAAGTTTTTGTGTGACAAATTTGCAGCCACGAAGATGCCTATGGATGATTTGAGCAAAGTATTTACCTTGGCATGTGGATTGGGGCCTCATACAAGGAATTCAGAACGACAATGCTTTCCAAATCTCCCTATCCAACCTTCAATCAGTTTATTCTTTCTCTTAGAGCGCATGAACAAATAAATCAAATGGAAGATGAAGAAGTCAAGGTATCCCTCCCTAATATGAATCAAGCTTTCTATAGTCATAGGGGAAGAGGGAGAGGAAGAAGAAGCAAACCATTTACCTCTCGTGGTATAGGATTCCAACCAAGCGAAGTAGCACTCCTCAAACAATGCATCAGAACACCTCTGTTTTCAACAATGCTTCTATTTTCTCTGACACACAGCAGCCTAAATCAAGCCCCACCAGAAATGAAGGTAATCAAATAGTTTGTCAAATATGTGGAAAGCCTAATCATACTGCCATAAAGTGTTGGAGTAGGTTCGATCATTCATACCAAAGTGATGAAATACCAACAACATTGGCAGCAATGACACTAAGTGAGGAACATGATCCAACACTCTATGTAGATTCAGGGGCAACATCACATGTGCTTAATGATATAGGTACAATCTCTTACCTAAAACTTTATAATGGGAATGAAAAACTATTTGTTGGAAATGAGGTTGGATTAAATATATCACACATAGGCCAAGGGAAATTACACACAAAAACCAGTATGCTAAATTTAAAAGATGCCTTGATTGTTCCTAATATTAAAAAGAATTTGATTTGAGTTAGTAAGTTAACCAATGATAACAATTACTATATAATTTTTCATGCGGATGGTTTTGTTATGAAGAGCAAACATGGGACAATACTAGCAAAAGGAACTAAGCAAAATGGATTGTATGCCTTGGATCAGAAGCCGCTACAAATATTCAATATGAAAACTGCATTTACTACTACTACATCAAATAAAGTGCCTATCCATATTTGGCAGAAACGTTTAGGTCATTTAAACAATTTGTCTATTAAGCATTTAGATAATAGCAACTTGATTCATGTATCAAATGGGAAGAAAGCAAAACATGTGTGTGAAACTTGCCAAATGAGCAAGAGTTGTAGGCTGCCTTTTTCATTGAATGATAAGTCAAGCATGGTTTCTTTTGATAGAATTCATTGTGATTTATGGGGTCCTGCACCCACTCTGCTAGCTGTGTAGATGATTATTCTAGGTTCACTTGGATTTATCCTCTAAAAAGAAAAGATGAGTTAATGGAATGCTTTATTAAATTTTAGAAGATGGTGGAAACTCACTTTGATAAAAGAATTACAATATTTCAGTCCGATGGAGGAGGTGAGTTTACTTCTTTTTAAGTTCAAATGTTTTCTAGATCAAAAGGGTATAGTTCATAATATGACATGTCCTCACACACCCCAACAAAATGGAGTGGTTGAGAGGAAACGTAGACACATAGTTGAGACCAGGTTAGCCTTAATTTTTCAATCAAGCATTCCCCTAAAATATTGGGTAGATGCTTTTCTCACATCTACGTTCATCATTAATAGAATGCCCTCCAAAGCACTTGAGATGAAATCCCCTTTTGAAAAACTACTCCAAAATAAACTCAACTATATGATAGCTTTAAAGTCTTTGGATGTAGATGCTATCCTTATTTAAAATACCAAGCAAAAAATAAGTTTGCTAAGAAGACCTATCCATGTGCGTTTGTTGGTTATAGCACTCATCATAAGAGATATAGATGCCTAGACTCTAATACTAATCGTATTTATATATCAAGACATGTCATATTTGATGAAGAAAATATGCCTTTTGAAAAACAACCTACACACCACACAACAACAACGTACTCTAGAAATCACCACTTTTTCAGATATAGGAATTGGAGAATGGATTTACCCTTGGTGTGAAGAACAGGTTGAAGTACTCCCTACTAATCCTACATTAGCAACCAGTAGCTCAAACACTCAAAGTCTTGCCACCATGAGAAAAATCTACCTTGAAGAAGATTCTCATGACAGCAACATGAGGTCAAATGATCAAAGTAGCAGTCATCGTGAAACTTGCAGCAGTAGGAGTGAAAGGTCTATGAGCATAATCAATGAAGTCTCTAATCAAGAACTAAAACAAAACATGATAGAAGAACAACAATCAGTTCCAGAACGAACAACTACACCAGTAGCAGAATCAATCCCTACAGACACTGAACTAACAATGTATCAATTTGGCTCTCCCTTGAATAACCTTAATTCAAGTTAAATTGACTGATTTACCTGATATAAATGACAATTTGTATATTAACCTGCCTTTTGACAACAATACAAGATCTTCAAATGCAGCTCACAATCACACATTGCAACCACCAATAAGAGATAAAACTAGAATATTGTCCACACATACTATGATGACTAGGTTGAAGTGAAAACAACCTATCTCCAACATAGAACAGCAACCCAAATCACTTATAGCCACCACAACAACCCTTGAACCAAAAATATTCAGAGGTGCAATTCAGAATCCTATCTGGAAGAAAGCAATGGAGGAAGAAATCCAAGCACTTCATGATAACAAGACCTGAGAACTTGTCCCAAAACTACCTAACACGAATATAGTTGGATCAAAATGGATTTTCAAAACCAAGTTCAAAGAAGATGGGTCACTAGAGAGACACAAGACTAGATTGGTTGCCCAAGGTTATTCACATGTAGAAGGCTTAGACTATGACGAAACTTTCAGCCCTGTCATAAAACCTACAACGATTCGTTTGGTATTGGCTTTAGCTGCTCCACTCAAATGGCCACTCAAGCAACTAGATGTCAAAAATGTTTTCTTGCATAGACACCTCAAGGAGAAAGTCTACATGTCTCAACCTCCAGGTTTTTCTAATCCTAGCTATCCTAATCATGCTTGGATGTTAAAACGATCATTGTATGACTTAAACAAACACCAAGAGCATGGTTTGATAGACTATCTCTATTTCTCATTCACTGGATTTACTTGTAGTACATTAGATCCTTCATTTTTTATCTTCAAGCAAAATCATATCTTGGTCCTAATGCTTATATGCGTGGATGATATCATTCTCACCGGAAATAACCAAACTTTTATTATGAACTTGGTAACAAAGTTAAGCACAGAATTTGCCTTGAAGGATTTGGGAGCTCTGCACTATTTTTTAGGTGTTGAAGTTCAACATACGCACAATGGCTTCCACATTACACAAAGCAGATATACGAGAGACATCTTAATGAAAGCCAAAATGTTGGAAGTTTCTCCTATATCCACTCCTATGGCAACAAGCAAGAACAAGTGCCCTCATGAAAATGAACTTGTAGATCCCACAGCTTATCGAAGTTTGGTGGGCTCCCTTCAATATCTCACCTTGACAAGGCCGGATATTCATTTCTATGTTAACAAAGCTTGCCAACATATGCAGCAACCACAAATGCAACACCTCAGGGATGTTAAATGCATACTTCGCTACCTTAAACACAGTCTGAATCATGGTATTTCTTTTCGTAAAAACAGTTCTCTAAATCTTTATGCCTTTTGTGATGCAGATTGGGCGGCTTGTCCAACCACTAGAAGAAGTACCTCAGGTATTTATGTATTCCTCGGATCTAATATAATCTCTTGGTCCTCAAAGAAGCAACCAACAGTTTCAAGGTCAAGCTCCAAGGCAGAATATCGATCCATCGCTAATGCAACAGCAGAACTAACATGGATCACATTCCTACTTCGTGACATTGGCATTCCTCTCACTAAACCACCTGAACTCTTCAGTGACAACATGAGTGCACTTCAAATGTCAATCAATCCAGTGTTTCATGCAATAAAGAAACACATCGAGTTAGACTACCATTTTGTTCATGAAAAGGTTGCTCTTGGATCCCTCATTACACAATATATTCCAACTCATGATCAACTAGCTGATATTTGTACGAAACCTCTCCCCAAAAACATGTTCAAAAGCCTTGCTAGCAAACAAGGTGTACGAGCTCTCCCTACCACCAGTTTGAGAACGATGTAAAGATTCAACTAGCTCATGTTCCCATATCAGTGGCTCAAGTCACCCCAATTTTTGCCTTCAACACGGACCCAATACCACATCTGTCTACTGCATATGAGAATGATAAATTGGAGGCACAAACTAATCGACCTAATTTATCTCAATAAAGTCTCCTCAATTAAGTCCCAGTTGGCTGATATAAATCAATATAAATCAACATTATTTCAGTCCCTAAATTGTTGTTATTCTCCATCATTGTGATCTCCATTATTGCAATTTCCCTTGTATATCGTGTACCATTAAAGATGGTAAGTTTCCGTTGTAGTTTTTTCATCTCTCCTTGTGCAGTATTTAAAAAGGATGAGAGGACTCTTGTAATATAGAAAAAAAAAATACATACTGATTATTGTTTACAAGTTTTGGC

mRNA sequence

ATGAAAGCCAAAATGTTGGAAGTTTCTCCTATATCCACTCCTATGGCAACAAGCAAGAACAAGTGCCCTCATGAAAATGAACTTGTAGATCCCACAGCTTATCGAAGTTTGGTGGGCTCCCTTCAATATCTCACCTTGACAAGGCCGGATATTCATTTCTATGTTAACAAAGCTTGCCAACATATGCAGCAACCACAAATGCAACACCTCAGGGATGTTAAATGCATACTTCGCTACCTTAAACACAGTCTGAATCATGGTATTTCTTTTCGTAAAAACAGTTCTCTAAATCTTTATGCCTTTTGTGATGCAGATTGGGCGGCTTGTCCAACCACTAGAAGAAGTACCTCAGGTATTTATGTATTCCTCGGATCTAATATAATCTCTTGGTCCTCAAAGAAGCAACCAACAGTTTCAAGGTCAAGCTCCAAGGCAGAATATCGATCCATCGCTAATGCAACAGCAGAACTAACATGGATCACATTCCTACTTCGTGACATTGGCATTCCTCTCACTAAACCACCTGAACTCTTCAGTGACAACATGAGTGCACTTCAAATGTCAATCAATCCAGTGTTTCATGCAATAAAGAAACACATCGAGTTAGACTACCATTTTGTTCATGAAAAGGTTGCTCTTGGATCCCTCATTACACAATATATTCCAACTCATGATCAACTAGCTGATATTTGTACGAAACCTCTCCCCAAAAACATGTTCAAAAGCCTTGCTAGCAAACAAGGTGTACGAGCTCTCCCTACCACCAGTTTGAGAACGATGTAA

Coding sequence (CDS)

ATGAAAGCCAAAATGTTGGAAGTTTCTCCTATATCCACTCCTATGGCAACAAGCAAGAACAAGTGCCCTCATGAAAATGAACTTGTAGATCCCACAGCTTATCGAAGTTTGGTGGGCTCCCTTCAATATCTCACCTTGACAAGGCCGGATATTCATTTCTATGTTAACAAAGCTTGCCAACATATGCAGCAACCACAAATGCAACACCTCAGGGATGTTAAATGCATACTTCGCTACCTTAAACACAGTCTGAATCATGGTATTTCTTTTCGTAAAAACAGTTCTCTAAATCTTTATGCCTTTTGTGATGCAGATTGGGCGGCTTGTCCAACCACTAGAAGAAGTACCTCAGGTATTTATGTATTCCTCGGATCTAATATAATCTCTTGGTCCTCAAAGAAGCAACCAACAGTTTCAAGGTCAAGCTCCAAGGCAGAATATCGATCCATCGCTAATGCAACAGCAGAACTAACATGGATCACATTCCTACTTCGTGACATTGGCATTCCTCTCACTAAACCACCTGAACTCTTCAGTGACAACATGAGTGCACTTCAAATGTCAATCAATCCAGTGTTTCATGCAATAAAGAAACACATCGAGTTAGACTACCATTTTGTTCATGAAAAGGTTGCTCTTGGATCCCTCATTACACAATATATTCCAACTCATGATCAACTAGCTGATATTTGTACGAAACCTCTCCCCAAAAACATGTTCAAAAGCCTTGCTAGCAAACAAGGTGTACGAGCTCTCCCTACCACCAGTTTGAGAACGATGTAA

Protein sequence

MKAKMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQHMQQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIYVFLGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSDNMSALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMFKSLASKQGVRALPTTSLRTM
Homology
BLAST of MC08g_new0392 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.3e-64
Identity = 124/253 (49.01%), Postives = 169/253 (66.80%), Query Frame = 0

Query: 2    KAKMLEVSPISTPMATS-KNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQ 61
            +  M+   P++TPMA S K       +L DPT YR +VGSLQYL  TRPDI + VN+  Q
Sbjct: 1212 RTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQ 1271

Query: 62   HMQQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIY 121
             M  P  +HL+ +K ILRYL  + NHGI  +K ++L+L+A+ DADWA       ST+G  
Sbjct: 1272 FMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYI 1331

Query: 122  VFLGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSD 181
            V+LG + ISWSSKKQ  V RSS++AEYRS+AN ++E+ WI  LL ++GI LT+PP ++ D
Sbjct: 1332 VYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCD 1391

Query: 182  NMSALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMF 241
            N+ A  +  NPVFH+  KHI +DYHF+  +V  G+L   ++ THDQLAD  TKPL +  F
Sbjct: 1392 NVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1451

Query: 242  KSLASKQGVRALP 254
            ++ ASK GV  +P
Sbjct: 1452 QNFASKIGVTRVP 1464

BLAST of MC08g_new0392 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 5.2e-62
Identity = 121/253 (47.83%), Postives = 166/253 (65.61%), Query Frame = 0

Query: 2    KAKMLEVSPISTPMATSKNKCPHE-NELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQ 61
            +  ML   P++TPMATS     H   +L DPT YR +VGSLQYL  TRPD+ + VN+  Q
Sbjct: 1195 RTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQ 1254

Query: 62   HMQQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIY 121
            +M  P   H   +K +LRYL  + +HGI  +K ++L+L+A+ DADWA       ST+G  
Sbjct: 1255 YMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYI 1314

Query: 122  VFLGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSD 181
            V+LG + ISWSSKKQ  V RSS++AEYRS+AN ++EL WI  LL ++GI L+ PP ++ D
Sbjct: 1315 VYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCD 1374

Query: 182  NMSALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMF 241
            N+ A  +  NPVFH+  KHI LDYHF+  +V  G+L   ++ THDQLAD  TKPL +  F
Sbjct: 1375 NVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1434

Query: 242  KSLASKQGVRALP 254
            ++ + K GV  +P
Sbjct: 1435 QNFSRKIGVIKVP 1447

BLAST of MC08g_new0392 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 9.3e-43
Identity = 84/157 (53.50%), Postives = 111/157 (70.70%), Query Frame = 0

Query: 3   AKMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQHM 62
           A ML+  P+STP+    N      +  DP+ +RS+VG+LQYLTLTRPDI + VN  CQ M
Sbjct: 69  AGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRM 128

Query: 63  QQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIYVF 122
            +P +     +K +LRY+K ++ HG+   KNS LN+ AFCD+DWA C +TRRST+G   F
Sbjct: 129 HEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTF 188

Query: 123 LGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTW 160
           LG NIISWS+K+QPTVSRSS++ EYR++A   AELTW
Sbjct: 189 LGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of MC08g_new0392 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 159.1 bits (401), Expect = 6.9e-38
Identity = 89/252 (35.32%), Postives = 143/252 (56.75%), Query Frame = 0

Query: 2    KAKMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTL-TRPDIHFYVNKACQ 61
            K  M   + +STP+ +  N     ++    T  RSL+G L Y+ L TRPD+   VN   +
Sbjct: 1149 KFNMENCNAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSR 1208

Query: 62   HMQQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSL--NLYAFCDADWAACPTTRRSTSG 121
            +  +   +  +++K +LRYLK +++  + F+KN +    +  + D+DWA     R+ST+G
Sbjct: 1209 YSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTG 1268

Query: 122  -IYVFLGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPEL 181
             ++     N+I W++K+Q +V+ SS++AEY ++  A  E  W+ FLL  I I L  P ++
Sbjct: 1269 YLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKI 1328

Query: 182  FSDNMSALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPK 241
            + DN   + ++ NP  H   KHI++ YHF  E+V    +  +YIPT +QLADI TKPLP 
Sbjct: 1329 YEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPA 1388

Query: 242  NMFKSLASKQGV 250
              F  L  K G+
Sbjct: 1389 ARFVELRDKLGL 1400

BLAST of MC08g_new0392 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.8e-29
Identity = 83/245 (33.88%), Postives = 128/245 (52.24%), Query Frame = 0

Query: 5    MLEVSPISTPMA----TSKNKCP---HENELVDPTAYRSLVGSLQY-LTLTRPDIHFYVN 64
            M    P+STP+A     SK  CP    E   +    Y S VGSL Y +  TRPDI   V 
Sbjct: 1075 MKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVG 1134

Query: 65   KACQHMQQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRST 124
               + ++ P  +H   VK ILRYL+ +    + F  +  + L  + DAD A     R+S+
Sbjct: 1135 VVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGDIDNRKSS 1194

Query: 125  SGIYVFLGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPE 184
            +G         ISW SK Q  V+ S+++AEY +      E+ W+   L+++G+   K   
Sbjct: 1195 TGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLH-QKEYV 1254

Query: 185  LFSDNMSALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLP 242
            ++ D+ SA+ +S N ++HA  KHI++ YH++ E V   SL    I T++  AD+ TK +P
Sbjct: 1255 VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVP 1314

BLAST of MC08g_new0392 vs. NCBI nr
Match: XP_022157372.1 (uncharacterized protein LOC111024092 [Momordica charantia] >XP_022157373.1 uncharacterized protein LOC111024092 [Momordica charantia] >XP_022157374.1 uncharacterized protein LOC111024092 [Momordica charantia] >XP_022157375.1 uncharacterized protein LOC111024092 [Momordica charantia] >XP_022157377.1 uncharacterized protein LOC111024092 [Momordica charantia] >XP_022157378.1 uncharacterized protein LOC111024092 [Momordica charantia] >XP_022157379.1 uncharacterized protein LOC111024092 [Momordica charantia] >XP_022157380.1 uncharacterized protein LOC111024092 [Momordica charantia] >XP_022157381.1 uncharacterized protein LOC111024092 [Momordica charantia] >XP_022157382.1 uncharacterized protein LOC111024092 [Momordica charantia])

HSP 1 Score: 527 bits (1358), Expect = 6.99e-187
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0

Query: 1   MKAKMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQ 60
           MKAKMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQ
Sbjct: 130 MKAKMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQ 189

Query: 61  HMQQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIY 120
           HMQQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIY
Sbjct: 190 HMQQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIY 249

Query: 121 VFLGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSD 180
           VFLGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSD
Sbjct: 250 VFLGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSD 309

Query: 181 NMSALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMF 240
           NMSALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMF
Sbjct: 310 NMSALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMF 369

Query: 241 KSLASKQGVRALPTTSLRTM 260
           KSLASKQGVRALPTTSLRTM
Sbjct: 370 KSLASKQGVRALPTTSLRTM 389

BLAST of MC08g_new0392 vs. NCBI nr
Match: XP_022139305.1 (uncharacterized protein LOC111010253 isoform X1 [Momordica charantia])

HSP 1 Score: 340 bits (871), Expect = 1.51e-113
Identity = 168/252 (66.67%), Postives = 198/252 (78.57%), Query Frame = 0

Query: 2   KAKMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQH 61
           KA+MLE S +STPM+TS +   ++NE++D T YRSLVGSLQYLTLTRPDI F VNKACQH
Sbjct: 66  KARMLEASQLSTPMSTSTSSSSNDNEIIDATQYRSLVGSLQYLTLTRPDITFAVNKACQH 125

Query: 62  MQQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIYV 121
           +  P+ + L  VK ILRYLK +L +GISF KNSSLNLYAFCDADW  CP TRRSTSG  +
Sbjct: 126 LHDPKQKDLNMVKHILRYLKGTLRYGISFYKNSSLNLYAFCDADWGGCPDTRRSTSGCCI 185

Query: 122 FLGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSDN 181
           FLGSN I WSSKKQ TV+RSSS+AEYR++A   A+LTWITF+L+DIG+ L+KPP+L  DN
Sbjct: 186 FLGSNCIFWSSKKQTTVARSSSEAEYRAMATIAADLTWITFILKDIGVKLSKPPQLMCDN 245

Query: 182 MSALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMFK 241
           MS L M  NPVFHA  KHIE+DYHFV EKV LG L T ++P+ DQLADI TKPL K  FK
Sbjct: 246 MSXLHMXKNPVFHARTKHIEMDYHFVXEKVCLGLLTTSFVPSKDQLADIFTKPLQKATFK 305

Query: 242 SLASKQGVRALP 253
           +L +K GVR  P
Sbjct: 306 NLRTKLGVRETP 317

BLAST of MC08g_new0392 vs. NCBI nr
Match: RVX04589.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 322 bits (826), Expect = 3.30e-99
Identity = 162/255 (63.53%), Postives = 191/255 (74.90%), Query Frame = 0

Query: 4    KMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQHMQ 63
            KM+E +PI+TPMA        + + +DPT YR LVGSLQYLT TRPDI   VNKACQH Q
Sbjct: 776  KMMECTPINTPMALKSIITSFDEQPIDPTQYRQLVGSLQYLTFTRPDIVHAVNKACQHFQ 835

Query: 64   QPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIYVFL 123
             P    LR VK ILRYLK ++ HGI F K SSL L  FCDADWA C  TRRSTSG  +FL
Sbjct: 836  APTKADLRAVKRILRYLKGTMEHGIRFFKQSSLRLTGFCDADWAGCTNTRRSTSGYCIFL 895

Query: 124  GSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSDNMS 183
            G+N ISWSSK+QPTVSRSS++AEYRS+A++ AE+TW+TFLLRDIGI L +PP+L  DN+S
Sbjct: 896  GANCISWSSKRQPTVSRSSAEAEYRSLASSAAEITWLTFLLRDIGIQLREPPQLLCDNLS 955

Query: 184  ALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMFKSL 243
            AL M++NPVFHA  KHIELDYHFV EKVA G LIT+++P+  Q+ADI TK LPK  F+  
Sbjct: 956  ALHMTVNPVFHARSKHIELDYHFVREKVARGVLITRFLPSSLQVADIFTKALPKTSFQFF 1015

Query: 244  ASKQGVRALPTTSLR 258
              K GV  LP TSLR
Sbjct: 1016 RFKLGVHKLPLTSLR 1030

BLAST of MC08g_new0392 vs. NCBI nr
Match: XP_024926999.1 (uncharacterized protein LOC112490753 [Ziziphus jujuba])

HSP 1 Score: 298 bits (763), Expect = 5.02e-98
Identity = 144/254 (56.69%), Postives = 186/254 (73.23%), Query Frame = 0

Query: 5   MLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQHMQQ 64
           M+  SP+STP+A        ++ LV+   +RS+VG+LQYLT TRPDI   VNK CQH+ Q
Sbjct: 1   MMHSSPLSTPLAVKPPALADDHTLVNEKDFRSIVGALQYLTFTRPDITHAVNKVCQHLHQ 60

Query: 65  PQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIYVFLG 124
           P + H R VK ILRYLK +  +G+     S+L    FCDADWA C  TRRST+G  ++LG
Sbjct: 61  PTLAHFRAVKRILRYLKGTSTYGLRIISQSALTFNGFCDADWAGCSLTRRSTTGFCIYLG 120

Query: 125 SNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSDNMSA 184
           SN +SWSSKKQPTV+RSS++AEYR++A+  AELTWI++LLRDIG+ L  PP+LFSDN+SA
Sbjct: 121 SNCVSWSSKKQPTVARSSAEAEYRALASIAAELTWISYLLRDIGVTLLHPPQLFSDNISA 180

Query: 185 LQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMFKSLA 244
           L M+ NPVFHA  KHIE+DYHFV EKV +G+L T++IP+  Q+AD+ TKPLPK+ F++  
Sbjct: 181 LHMTKNPVFHARMKHIEIDYHFVREKVVIGALETKFIPSLQQVADVLTKPLPKHSFRTFR 240

Query: 245 SKQGVRALPTTSLR 258
            K GV  L   SLR
Sbjct: 241 FKLGVHNLSLASLR 254

BLAST of MC08g_new0392 vs. NCBI nr
Match: RVW19921.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 322 bits (826), Expect = 1.41e-97
Identity = 162/255 (63.53%), Postives = 191/255 (74.90%), Query Frame = 0

Query: 4    KMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQHMQ 63
            KM+E +PI+TPMA        + + +DPT YR LVGSLQYLT TRPDI   VNKACQH Q
Sbjct: 1135 KMMECTPINTPMALKSIITSFDEQPIDPTQYRQLVGSLQYLTFTRPDIVHAVNKACQHFQ 1194

Query: 64   QPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIYVFL 123
             P    LR VK ILRYLK ++ HGI F K SSL L  FCDADWA C  TRRSTSG  +FL
Sbjct: 1195 APTKADLRAVKRILRYLKGTMEHGIRFFKQSSLRLTGFCDADWAGCTNTRRSTSGYCIFL 1254

Query: 124  GSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSDNMS 183
            G+N ISWSSK+QPTVSRSS++AEYRS+A++ AE+TW+TFLLRDIGI L +PP+L  DN+S
Sbjct: 1255 GANCISWSSKRQPTVSRSSAEAEYRSLASSAAEITWLTFLLRDIGIQLREPPQLLCDNLS 1314

Query: 184  ALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMFKSL 243
            AL M++NPVFHA  KHIELDYHFV EKVA G LIT+++P+  Q+ADI TK LPK  F+  
Sbjct: 1315 ALHMTVNPVFHARSKHIELDYHFVREKVARGVLITRFLPSSLQVADIFTKALPKTSFQFF 1374

Query: 244  ASKQGVRALPTTSLR 258
              K GV  LP TSLR
Sbjct: 1375 RFKLGVHKLPLTSLR 1389

BLAST of MC08g_new0392 vs. ExPASy TrEMBL
Match: A0A6J1DUB4 (uncharacterized protein LOC111024092 OS=Momordica charantia OX=3673 GN=LOC111024092 PE=4 SV=1)

HSP 1 Score: 527 bits (1358), Expect = 3.39e-187
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0

Query: 1   MKAKMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQ 60
           MKAKMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQ
Sbjct: 130 MKAKMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQ 189

Query: 61  HMQQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIY 120
           HMQQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIY
Sbjct: 190 HMQQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIY 249

Query: 121 VFLGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSD 180
           VFLGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSD
Sbjct: 250 VFLGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSD 309

Query: 181 NMSALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMF 240
           NMSALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMF
Sbjct: 310 NMSALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMF 369

Query: 241 KSLASKQGVRALPTTSLRTM 260
           KSLASKQGVRALPTTSLRTM
Sbjct: 370 KSLASKQGVRALPTTSLRTM 389

BLAST of MC08g_new0392 vs. ExPASy TrEMBL
Match: A0A6J1CBZ1 (uncharacterized protein LOC111010253 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010253 PE=4 SV=1)

HSP 1 Score: 340 bits (871), Expect = 7.32e-114
Identity = 168/252 (66.67%), Postives = 198/252 (78.57%), Query Frame = 0

Query: 2   KAKMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQH 61
           KA+MLE S +STPM+TS +   ++NE++D T YRSLVGSLQYLTLTRPDI F VNKACQH
Sbjct: 66  KARMLEASQLSTPMSTSTSSSSNDNEIIDATQYRSLVGSLQYLTLTRPDITFAVNKACQH 125

Query: 62  MQQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIYV 121
           +  P+ + L  VK ILRYLK +L +GISF KNSSLNLYAFCDADW  CP TRRSTSG  +
Sbjct: 126 LHDPKQKDLNMVKHILRYLKGTLRYGISFYKNSSLNLYAFCDADWGGCPDTRRSTSGCCI 185

Query: 122 FLGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSDN 181
           FLGSN I WSSKKQ TV+RSSS+AEYR++A   A+LTWITF+L+DIG+ L+KPP+L  DN
Sbjct: 186 FLGSNCIFWSSKKQTTVARSSSEAEYRAMATIAADLTWITFILKDIGVKLSKPPQLMCDN 245

Query: 182 MSALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMFK 241
           MS L M  NPVFHA  KHIE+DYHFV EKV LG L T ++P+ DQLADI TKPL K  FK
Sbjct: 246 MSXLHMXKNPVFHARTKHIEMDYHFVXEKVCLGLLTTSFVPSKDQLADIFTKPLQKATFK 305

Query: 242 SLASKQGVRALP 253
           +L +K GVR  P
Sbjct: 306 NLRTKLGVRETP 317

BLAST of MC08g_new0392 vs. ExPASy TrEMBL
Match: A0A438J6K3 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_103 PE=4 SV=1)

HSP 1 Score: 322 bits (826), Expect = 1.60e-99
Identity = 162/255 (63.53%), Postives = 191/255 (74.90%), Query Frame = 0

Query: 4    KMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQHMQ 63
            KM+E +PI+TPMA        + + +DPT YR LVGSLQYLT TRPDI   VNKACQH Q
Sbjct: 776  KMMECTPINTPMALKSIITSFDEQPIDPTQYRQLVGSLQYLTFTRPDIVHAVNKACQHFQ 835

Query: 64   QPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIYVFL 123
             P    LR VK ILRYLK ++ HGI F K SSL L  FCDADWA C  TRRSTSG  +FL
Sbjct: 836  APTKADLRAVKRILRYLKGTMEHGIRFFKQSSLRLTGFCDADWAGCTNTRRSTSGYCIFL 895

Query: 124  GSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSDNMS 183
            G+N ISWSSK+QPTVSRSS++AEYRS+A++ AE+TW+TFLLRDIGI L +PP+L  DN+S
Sbjct: 896  GANCISWSSKRQPTVSRSSAEAEYRSLASSAAEITWLTFLLRDIGIQLREPPQLLCDNLS 955

Query: 184  ALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMFKSL 243
            AL M++NPVFHA  KHIELDYHFV EKVA G LIT+++P+  Q+ADI TK LPK  F+  
Sbjct: 956  ALHMTVNPVFHARSKHIELDYHFVREKVARGVLITRFLPSSLQVADIFTKALPKTSFQFF 1015

Query: 244  ASKQGVRALPTTSLR 258
              K GV  LP TSLR
Sbjct: 1016 RFKLGVHKLPLTSLR 1030

BLAST of MC08g_new0392 vs. ExPASy TrEMBL
Match: A0A6P6FYB5 (uncharacterized protein LOC112490753 OS=Ziziphus jujuba OX=326968 GN=LOC112490753 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 2.43e-98
Identity = 144/254 (56.69%), Postives = 186/254 (73.23%), Query Frame = 0

Query: 5   MLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQHMQQ 64
           M+  SP+STP+A        ++ LV+   +RS+VG+LQYLT TRPDI   VNK CQH+ Q
Sbjct: 1   MMHSSPLSTPLAVKPPALADDHTLVNEKDFRSIVGALQYLTFTRPDITHAVNKVCQHLHQ 60

Query: 65  PQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIYVFLG 124
           P + H R VK ILRYLK +  +G+     S+L    FCDADWA C  TRRST+G  ++LG
Sbjct: 61  PTLAHFRAVKRILRYLKGTSTYGLRIISQSALTFNGFCDADWAGCSLTRRSTTGFCIYLG 120

Query: 125 SNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSDNMSA 184
           SN +SWSSKKQPTV+RSS++AEYR++A+  AELTWI++LLRDIG+ L  PP+LFSDN+SA
Sbjct: 121 SNCVSWSSKKQPTVARSSAEAEYRALASIAAELTWISYLLRDIGVTLLHPPQLFSDNISA 180

Query: 185 LQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMFKSLA 244
           L M+ NPVFHA  KHIE+DYHFV EKV +G+L T++IP+  Q+AD+ TKPLPK+ F++  
Sbjct: 181 LHMTKNPVFHARMKHIEIDYHFVREKVVIGALETKFIPSLQQVADVLTKPLPKHSFRTFR 240

Query: 245 SKQGVRALPTTSLR 258
            K GV  L   SLR
Sbjct: 241 FKLGVHNLSLASLR 254

BLAST of MC08g_new0392 vs. ExPASy TrEMBL
Match: A0A438C9J9 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_1040 PE=4 SV=1)

HSP 1 Score: 322 bits (826), Expect = 6.83e-98
Identity = 162/255 (63.53%), Postives = 191/255 (74.90%), Query Frame = 0

Query: 4    KMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQHMQ 63
            KM+E +PI+TPMA        + + +DPT YR LVGSLQYLT TRPDI   VNKACQH Q
Sbjct: 1135 KMMECTPINTPMALKSIITSFDEQPIDPTQYRQLVGSLQYLTFTRPDIVHAVNKACQHFQ 1194

Query: 64   QPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIYVFL 123
             P    LR VK ILRYLK ++ HGI F K SSL L  FCDADWA C  TRRSTSG  +FL
Sbjct: 1195 APTKADLRAVKRILRYLKGTMEHGIRFFKQSSLRLTGFCDADWAGCTNTRRSTSGYCIFL 1254

Query: 124  GSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSDNMS 183
            G+N ISWSSK+QPTVSRSS++AEYRS+A++ AE+TW+TFLLRDIGI L +PP+L  DN+S
Sbjct: 1255 GANCISWSSKRQPTVSRSSAEAEYRSLASSAAEITWLTFLLRDIGIQLREPPQLLCDNLS 1314

Query: 184  ALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQLADICTKPLPKNMFKSL 243
            AL M++NPVFHA  KHIELDYHFV EKVA G LIT+++P+  Q+ADI TK LPK  F+  
Sbjct: 1315 ALHMTVNPVFHARSKHIELDYHFVREKVARGVLITRFLPSSLQVADIFTKALPKTSFQFF 1374

Query: 244  ASKQGVRALPTTSLR 258
              K GV  LP TSLR
Sbjct: 1375 RFKLGVHKLPLTSLR 1389

BLAST of MC08g_new0392 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 176.4 bits (446), Expect = 3.0e-44
Identity = 90/223 (40.36%), Postives = 134/223 (60.09%), Query Frame = 0

Query: 5   MLEVSPISTPMATSKNKCPHE-NELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQHMQ 64
           +L   P S PM  S     H   + VD  AYR L+G L YL +TR DI F VNK  Q  +
Sbjct: 348 LLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSE 407

Query: 65  QPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIYVFL 124
            P++ H + V  IL Y+K ++  G+ +   + + L  F DA + +C  TRRST+G  +FL
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467

Query: 125 GSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTWITFLLRDIGIPLTKPPELFSDNMS 184
           G+++ISW SKKQ  VS+SS++AEYR+++ AT E+ W+    R++ +PL+KP  LF DN +
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527

Query: 185 ALQMSINPVFHAIKKHIELDYHFVHEKVALGSLITQYIPTHDQ 227
           A+ ++ N VFH   KHIE D H V E+    + ++     +D+
Sbjct: 528 AIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDE 570

BLAST of MC08g_new0392 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 175.3 bits (443), Expect = 6.6e-44
Identity = 84/157 (53.50%), Postives = 111/157 (70.70%), Query Frame = 0

Query: 3   AKMLEVSPISTPMATSKNKCPHENELVDPTAYRSLVGSLQYLTLTRPDIHFYVNKACQHM 62
           A ML+  P+STP+    N      +  DP+ +RS+VG+LQYLTLTRPDI + VN  CQ M
Sbjct: 69  AGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRM 128

Query: 63  QQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFCDADWAACPTTRRSTSGIYVF 122
            +P +     +K +LRY+K ++ HG+   KNS LN+ AFCD+DWA C +TRRST+G   F
Sbjct: 129 HEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTF 188

Query: 123 LGSNIISWSSKKQPTVSRSSSKAEYRSIANATAELTW 160
           LG NIISWS+K+QPTVSRSS++ EYR++A   AELTW
Sbjct: 189 LGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of MC08g_new0392 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-12
Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 0

Query: 43  YLTLTRPDIHFYVNKACQHMQQPQMQHLRDVKCILRYLKHSLNHGISFRKNSSLNLYAFC 102
           YLT+TRPD+ F VN+  Q     +   ++ V  +L Y+K ++  G+ +   S L L AF 
Sbjct: 2   YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 103 DADWAACPTTRRSTSG 119
           D+DWA+CP TRRS +G
Sbjct: 62  DSDWASCPDTRRSVTG 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q94HW24.3e-6449.01Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT945.2e-6247.83Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P925199.3e-4353.50Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
P041466.9e-3835.32Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P109785.8e-2933.88Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Match NameE-valueIdentityDescription
XP_022157372.16.99e-187100.00uncharacterized protein LOC111024092 [Momordica charantia] >XP_022157373.1 uncha... [more]
XP_022139305.11.51e-11366.67uncharacterized protein LOC111010253 isoform X1 [Momordica charantia][more]
RVX04589.13.30e-9963.53Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera][more]
XP_024926999.15.02e-9856.69uncharacterized protein LOC112490753 [Ziziphus jujuba][more]
RVW19921.11.41e-9763.53Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
A0A6J1DUB43.39e-187100.00uncharacterized protein LOC111024092 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1CBZ17.32e-11466.67uncharacterized protein LOC111010253 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A438J6K31.60e-9963.53Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... [more]
A0A6P6FYB52.43e-9856.69uncharacterized protein LOC112490753 OS=Ziziphus jujuba OX=326968 GN=LOC11249075... [more]
A0A438C9J96.83e-9863.53Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... [more]
Match NameE-valueIdentityDescription
AT4G23160.13.0e-4440.36cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.16.6e-4453.50DNA/RNA polymerases superfamily protein [more]
ATMG00240.11.8e-1242.11Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 106..245
NoneNo IPR availablePANTHERPTHR11439:SF338GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 106..245
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 99..237
e-value: 1.85331E-75
score: 223.884
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 18..206

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g_new0392.1MC08g_new0392.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process