MC08g_new0390 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g_new0390
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 19652179 .. 19657298 (+)
RNA-Seq ExpressionMC08g_new0390
SyntenyMC08g_new0390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATTGAACACAATAGAGGCAATAAGAATAAGGGCATTGCAATTGCACTGCTTAGAAATCTTAGGATTTGGGAGTTTGAATTAATGAATGAATTAATTAATGAATTAGGTACGGCTACGAGTAGAGGCAATGAAAGCTCAATGGGTGGGAATGGCTGGTGAATTGGTAGATGCTTCCCCATTGGTCTCATTCAAGTGAATTAAGCTTAGAATTTTTTTTGGGTATTTTTGTGTGAGCCACTCTTTCTTCTTCTTCCTTTGCACCTGTCCAAAACTGATCAATTTCACGTCTCTAGCTATAATGACCTTTTGAATAAAATAGAATAAAAGATTTGGCACAATGTAGTGAGTTCAAATATGGATGACGAAAAATATAATGGATGGTTACACTTTTAGTTTTAAATTGTATCCTTATATTATTTGACTGCCAATGTAATCTTGTGCATCTTGGGTAATGTCTTTGAATTAACTGGAAGTATATTCTTGTATCTTCTACAGGTTCTTATATTGAAATGTTACAAGTTTCACGATTCTTGTATATTTTACAATATGCTTTAAATGACCATTTGTTCCTTTAACGCAAAGGAAGTTCTCATTAAAAAAAGAAAAGTAGAGACCAAGAGTTAAAAAGAAAAAATAGAGAGAAAGAGAGATGCTCACTTTGATTAAGAGGTGGTGTTATTCCATAATCTCTTGATCTCATTTAAGTTTTTATTATTCTTCAATTTCCAATGTCACTAATATAATTTAACCATATGTCTTAATATTTACCCATATGTTGGCATGTAGTTAATCTTAAATGATGTTGATGATCTTTTACTCCTTATGATAGCTAGGTTTATTATAGGCTTATGTACTATAAACTGTTGCTTATGTTGGGTTTATTATTGTTTGATATAGCGTTTTTTCTTTGTTCTTTATAGATAATTTTTAGTTAAGTTTATTATAGGCTTATGTACTATAAACTGTTGCTTATGTTTATGTTTATTTTTGTTTGATATAGTTTTTTTTTCCTTTTTTCTTTGTAGATAATTTTTTTAGTTAAGTTATTCTATATGGATAAGTCATGGATGAACAAAGATAGAATGTCAATGGAATCTAACTTAGGTGTTGAGAAGTTCATTGAAAATGGACTACGACATTCAAAAGGGTCAAACTGCATATCGTGTCCTTGCTTGAACTTTGCAAATGCAATTCTACAAGAGTTGAACATAGTTAGAGAACACTTATTTATTTATGGTATTGATCAGAGTTATAAATATGGATTTGGCATGGTGAGCAACTACCTAAGGATGAAAGTGGTACTAGTAAAGGAAAAGAAGATTATGATGATGATGGCATAAAGAATACTACTAATATGTTTGAAGCTGCACAAGACTATTTTTCAAATAAGTTTGAAAACTTTGAACAACTATTAAGTGCGACATGTTTAAGATAGTGGACACATCTGAAGTTGCGAAAGAAAGTTATTCCTCACTAGACGAACGTGCAAAAAAGTTGGCTAACATTTTCGCTTTAGGACAAACAAACCAAAAAATAATGATACGTTACAATAGCGGGTAAGAAACAATGTTTTTTAAAACTTGTGGTTGTCATAATTTTGTTATTTTATATTTGTTTCGCTGATGTTAACTTTTTCTTATAAGAATCATTGGACATTATGTGTTGTTGATGTGCATAATAATATGATTTACGTTTTAGACTCTTTGCACCCCTGCTATTAAGGAAGACATTAAATATGTCGTGAATAGGTAAGTATTATCTATATTTTTAGTTTGATACATTAATGTGTAGGATTGGTAACTTTTTTTTTTAAATATATTTAGGGCTCTGAGAATGTTTATGACGCAGAATACTATTACACAAGGTAGAAAAAATCCTACTTAGCTTCTTCGACGGGTAAGTATAACTATATTGCTTTATGTTATTATTTTTTAATAAGTTCTAAAACTTAGCATTTTTATATATGTATATTGCCCATGTCAATCAGGATTGGTAGAGTGTGGATGTTATGTCATGAGGAAAATTCGACAGATAATGCATAATCGAGACACTCCAATACCTAATCTTGTATGTCTTTCATGCACGCTCAAAACACAACTCTACTTTTCATATTCGAATTATATACTTATATTATTTATACTTTATTACATGTAGTTCAATTCAAAAAAGCCGTATACTCAAGCCGAACTTGATGAGGTATAGGATGAATGAGCCAGATTTGTTGCGAACTACGCTTAGTTTGGATTAGATAGTAAATATAGTTTTATCGTTTTAGCCTTTTAATATGTAAAACCTTGAACCATTTATATGTTATTTCAATATGCATTGGTTGTATTTGTGAGCTACTCAACATTTTACTTAGTTTGTTCATTTAACACTTCTTAATATTGTTTACTTAATGAATTAGATATTATAGAAGGATTGCCATGTGTTGTAGTTGCTGAATTTCTGATATCTATTGAAGATGTGTATTAGAATTTCTACTGATTGTATTAGTGGTGTGCTTATGATTGTGTTTGTGATGTGCTGATACAGATCTTTTAATTATTAATTTATTTTGTACGATTGTTTGGCTAGATATATTTTGATACTTTAGGTATTATGGTATGTGGAATATTTTATTCATATTTTTGTTTCGGGTTTTGTAAAAAACAATGTCAGTTAAAACTGACATTGTAGCCAACTGACATTGTAATTATGAACGAAAACAATGTCAGTTATAGAGGAACGATGTCGGATCTATCAATGTCGGTAATTAACTGACATTATATGGACAATCAATGTCGGTCTGGAACTGACATTACAGACCAACCGACATCGTAGGCTACAATGACACCACGGTTAATGTCGGTTGGGAACCGACATTGAAATAACCGACATCGAACATATACACTGTCGGTTTTATTGACGTTAGTTGGCAACCGACATTGTTTGAGAAACGACATTGTATGATACGATAACACCCGGGTTAATGTCGGTTTGAAAATCGACATCTAATATGTATGATGTCAGTTGACAACTGACATTACAAGCCAATTTTGTAGCAGTGAGTCTTCTTTTAGCCTCGTAGGATGTACTAGGTATAGATGCATCAGTCAGAAGTACTTCCTTTAACAACTCAAGTAACATATCAAACGATTTATTACTCCAGTTGTTAATGACCTTAAGATGCATAAGCTTTACTAAAAAAATTTAATGAAGAGAATCGTGTACAACTTGGATACAATTGATTACGTGCTTCATTGAACAACTGCTTGAAAATATTAGACGTGTCTCTTTCACGTTCGTTTGGGGGCGTCTCAAAACAAAATTGTTCCCCTTCTACATTTTCTTCTACAACAGGGCATTGTAAATCATTGAGAAGACTAGACATCTCACCATCCTCATTATTCATAACATTGGACTCTACTTAATTGATTATACGAAGAAGTTTCATGTCTTGTATAACTACTTAAAGAGGTTGGTTCTTCTCCATGGTATATCCATTGAGTATATGAATGTGATATTCCATTTATAAACAAATGACTTTCTATTTTTCCTGTATTGTTGACATGAAGTTTTGCCTGTTCTATGAACTGTTTTACTCCTTCTACGTACTCGGGCGAGAATCTATCTCTAACCTTAATCCAATCCTTATTCATTCTCAATGATGATAGTGTTAAAAGAATCCTCAATTCAGTATCAATGGGCAATGTTGAATCCTAAGAGAAGGAGACAAAAGATTAGAATCTTTTGTCATCACCATTAGGATATTTTGAAAAGAGGATATGGGTGGTCATAATGAAGGTTGTTGTAAAAAATAGGAGACTTTGAAAGTATTATTGAGATCTTAGATATGTCTCTAAAATATAGGCAGTAAGAAAAGAACTAAACTAGCTAAAATACAACTCAAATCTATTTCGATCACCTAGATATTTCAATGCTTTGCATATCGTTTTTAAAAGTTTCTTAAAATGTAAACTAAATTTTGAAAATTAAATTTGCTTAAGTACCTATTAATTAAACCATCACGCTGACCATCAAAATATTTCATACTTTACGTACAAAACTAATAAATAAAATCAATCAAAGCAACATCGGCATAACAAACAAAATAACGAATTCAGAAATAAAATCAGCACACGGCTAAATAAAATAGTTCATATTTACAAAATCAATAAATTAAATCAAACAAACAGAATTTTAACATGCTCACAACTTAATTAATAAATTCACAATCACAATAAACTCAAAGTCAAGCTTACGATTCCAACCTAACAAAACCTCACTAATTATTTGGACACTTGAATAGAAATCAACATAAACTCACTTAAAAAAATTGTCATAATTAAAATTCCCAAATTTTAGAAACACGAATACACACAAAAAGAATCCTAAAATTCCCAATTTTTAAAATAAATATCCAAAATCTTCAAAACTTTGAAGTAACACAATCTACAAACTAATTCCTCTAAACAACCACCCTCAAAATAAAATTCATCTTTCCCTATTAACAAAATAAAGTTTCAAAATCATAAAATTTTCTAAAATACAAACTCAAACTAATTTTCCAACTAAATCTATTAACATTAGCTCAAAATCAATAACCCATATCAAAATCAAGCTAAAATCAAAATAAATATCACGGTTTCACAAATGCAATCCATATAAAACATCAATATAATTTACATGCTTAGTTAAACCCTATAACTCTACCAAAAAATCTCTATCAAAAAATAAAATAACAATCATAAATCAAACATTATACATAAAATTAAAAAAAAGGGAGAATAGACCTTCGGCGATTTGATCAGAGGTGGTGGCGTCAGAAACCGGTGGCTTCGGGGCGGCGGCTTCAGCATGGCGAGAGGTGTCGGCCGGCGGCTTCGGAACGGCTAGCGGCAGAAGAGGAAGGGCGGAGGAGGAAGGGTGAAAGAGGAAGGGCGAAGGCGGGACGAGGAGGGGCGACTGGACGAGGAGCGACGGCGGAGTGGCGAGACAGCAGCGAGATGGCGGCTGGACGAGGAAGGGTGGCCGGCGGTGGAGCTGAAGAGGCGAAGGTGTGTTGGGCGGCGGGGGGATTGAAATCAAAAGATGAACATGTGAGGACGCATGGGGGGGTGGGTTTCAATTGA

mRNA sequence

ATGAACATTGAACACAATAGAGGCAATAAGAATAAGGGCATTGCAATTGCACTGCTTAGAAATCTTAGGATTTGGGAGTTTGAATTAATGAATGAATTAATTAATGAATTAGGATTGGTAGAGTGTGGATGTTATGTCATGAGGAAAATTCGACAGATAATGCATAATCGAGACACTCCAATACCTAATCTTTTCAATTCAAAAAAGCCGTATACTCAAGCCGAACTTGATGAGAGGTGGTGGCGTCAGAAACCGGTGGCTTCGGGGCGGCGGCTTCAGCATGGCGAGAGGTGTCGGCCGGCGGCTTCGGAACGGCTAGCGGCAGAAGAGGAAGGGCGGAGGAGGAAGGGTGAAAGAGGAAGGGCGAAGGCGGGACGAGGAGGGGCGACTGGACGAGGAGCGACGGCGGAGTGGCGAGACAGCAGCGAGATGGCGGCTGGACGAGGAAGGGTGGCCGGCGGTGGAGCTGAAGAGGCGAAGGTGTGTTGGGCGGCGGGGGGATTGAAATCAAAAGATGAACATGTGAGGACGCATGGGGGGGTGGGTTTCAATTGA

Coding sequence (CDS)

ATGAACATTGAACACAATAGAGGCAATAAGAATAAGGGCATTGCAATTGCACTGCTTAGAAATCTTAGGATTTGGGAGTTTGAATTAATGAATGAATTAATTAATGAATTAGGATTGGTAGAGTGTGGATGTTATGTCATGAGGAAAATTCGACAGATAATGCATAATCGAGACACTCCAATACCTAATCTTTTCAATTCAAAAAAGCCGTATACTCAAGCCGAACTTGATGAGAGGTGGTGGCGTCAGAAACCGGTGGCTTCGGGGCGGCGGCTTCAGCATGGCGAGAGGTGTCGGCCGGCGGCTTCGGAACGGCTAGCGGCAGAAGAGGAAGGGCGGAGGAGGAAGGGTGAAAGAGGAAGGGCGAAGGCGGGACGAGGAGGGGCGACTGGACGAGGAGCGACGGCGGAGTGGCGAGACAGCAGCGAGATGGCGGCTGGACGAGGAAGGGTGGCCGGCGGTGGAGCTGAAGAGGCGAAGGTGTGTTGGGCGGCGGGGGGATTGAAATCAAAAGATGAACATGTGAGGACGCATGGGGGGGTGGGTTTCAATTGA

Protein sequence

MNIEHNRGNKNKGIAIALLRNLRIWEFELMNELINELGLVECGCYVMRKIRQIMHNRDTPIPNLFNSKKPYTQAELDERWWRQKPVASGRRLQHGERCRPAASERLAAEEEGRRRKGERGRAKAGRGGATGRGATAEWRDSSEMAAGRGRVAGGGAEEAKVCWAAGGLKSKDEHVRTHGGVGFN
Homology
[Close]
BLAST of MC08g_new0390 vs. NCBI nr
Match: XP_022157210.1 (uncharacterized protein LOC111023974 isoform X2 [Momordica charantia] >XP_022157211.1 uncharacterized protein LOC111023974 isoform X2 [Momordica charantia])

HSP 1 Score: 52.8 bits (125), Expect = 1.88e-05
Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0 

Query: 35 NELGLVECGCYVMRKIRQIMHNRDTPIPNLFNSKKPYTQAELDE 78
           +LG +ECG Y+ + IR+I+ N +TPI  LFN+K  Y Q E+DE
Sbjct: 43 RQLGSIECGYYLQKYIREIVCNPNTPITELFNTKNAYKQEEIDE 86

[Close]
BLAST of MC08g_new0390 vs. NCBI nr
Match: XP_022157207.1 (uncharacterized protein LOC111023974 isoform X1 [Momordica charantia] >XP_022157209.1 uncharacterized protein LOC111023974 isoform X1 [Momordica charantia])

HSP 1 Score: 52.8 bits (125), Expect = 2.24e-05
Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0 

Query: 35 NELGLVECGCYVMRKIRQIMHNRDTPIPNLFNSKKPYTQAELDE 78
           +LG +ECG Y+ + IR+I+ N +TPI  LFN+K  Y Q E+DE
Sbjct: 51 RQLGSIECGYYLQKYIREIVCNPNTPITELFNTKNAYKQEEIDE 94

[Close]
BLAST of MC08g_new0390 vs. NCBI nr
Match: KAA0052047.1 (uncharacterized protein E6C27_scaffold578G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 48.9 bits (115), Expect = 3.37e-04
Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 0 

Query: 42 CGCYVMRKIRQIMHNRDTPIPNLFNSKKPYTQAELDE 78
          CG YV + I +I+HN  T I NLFN+K  Y+Q E+DE
Sbjct: 22 CGYYVQKYIHEIVHNSSTSITNLFNTKNAYSQEEIDE 58

[Close]
BLAST of MC08g_new0390 vs. NCBI nr
Match: XP_022136079.1 (uncharacterized protein LOC111007859 isoform X3 [Momordica charantia])

HSP 1 Score: 52.4 bits (124), Expect = 3.49e-04
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 0 

Query: 36  ELGLVECGCYVMRKIRQIMHNRDTPIPNLFNSKKPYTQAELDE 78
           ++G VECG YV + IR+I+ N  T I N+FN+K  Y Q E+DE
Sbjct: 588 QMGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDE 630

[Close]
BLAST of MC08g_new0390 vs. NCBI nr
Match: XP_022136077.1 (uncharacterized protein LOC111007859 isoform X2 [Momordica charantia])

HSP 1 Score: 52.4 bits (124), Expect = 3.52e-04
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 0 

Query: 36  ELGLVECGCYVMRKIRQIMHNRDTPIPNLFNSKKPYTQAELDE 78
           ++G VECG YV + IR+I+ N  T I N+FN+K  Y Q E+DE
Sbjct: 610 QMGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDE 652

[Close]
BLAST of MC08g_new0390 vs. ExPASy TrEMBL
Match: A0A6J1DSG8 (uncharacterized protein LOC111023974 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023974 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.09e-06
Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0 

Query: 35 NELGLVECGCYVMRKIRQIMHNRDTPIPNLFNSKKPYTQAELDE 78
           +LG +ECG Y+ + IR+I+ N +TPI  LFN+K  Y Q E+DE
Sbjct: 43 RQLGSIECGYYLQKYIREIVCNPNTPITELFNTKNAYKQEEIDE 86

[Close]
BLAST of MC08g_new0390 vs. ExPASy TrEMBL
Match: A0A6J1DTY8 (uncharacterized protein LOC111023974 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023974 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.08e-05
Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0 

Query: 35 NELGLVECGCYVMRKIRQIMHNRDTPIPNLFNSKKPYTQAELDE 78
           +LG +ECG Y+ + IR+I+ N +TPI  LFN+K  Y Q E+DE
Sbjct: 51 RQLGSIECGYYLQKYIREIVCNPNTPITELFNTKNAYKQEEIDE 94

[Close]
BLAST of MC08g_new0390 vs. ExPASy TrEMBL
Match: A0A5A7UC88 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00090 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.63e-04
Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 0 

Query: 42 CGCYVMRKIRQIMHNRDTPIPNLFNSKKPYTQAELDE 78
          CG YV + I +I+HN  T I NLFN+K  Y+Q E+DE
Sbjct: 22 CGYYVQKYIHEIVHNSSTSITNLFNTKNAYSQEEIDE 58

[Close]
BLAST of MC08g_new0390 vs. ExPASy TrEMBL
Match: A0A6J1C398 (uncharacterized protein LOC111007859 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.69e-04
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 0 

Query: 36  ELGLVECGCYVMRKIRQIMHNRDTPIPNLFNSKKPYTQAELDE 78
           ++G VECG YV + IR+I+ N  T I N+FN+K  Y Q E+DE
Sbjct: 588 QMGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDE 630

[Close]
BLAST of MC08g_new0390 vs. ExPASy TrEMBL
Match: A0A6J1C4J7 (uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.70e-04
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 0 

Query: 36  ELGLVECGCYVMRKIRQIMHNRDTPIPNLFNSKKPYTQAELDE 78
           ++G VECG YV + IR+I+ N  T I N+FN+K  Y Q E+DE
Sbjct: 610 QMGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDE 652

The following BLAST results are available for this feature:
BLAST of MC08g_new0390 vs.
Match NameE-valueIdentityDescription
BLAST of MC08g_new0390 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022157210.11.88e-0550.00uncharacterized protein LOC111023974 isoform X2 [Momordica charantia] >XP_022157... [more]
XP_022157207.12.24e-0550.00uncharacterized protein LOC111023974 isoform X1 [Momordica charantia] >XP_022157... [more]
KAA0052047.13.37e-0454.05uncharacterized protein E6C27_scaffold578G00090 [Cucumis melo var. makuwa][more]
XP_022136079.13.49e-0451.16uncharacterized protein LOC111007859 isoform X3 [Momordica charantia][more]
XP_022136077.13.52e-0451.16uncharacterized protein LOC111007859 isoform X2 [Momordica charantia][more]
BLAST of MC08g_new0390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DSG89.09e-0650.00uncharacterized protein LOC111023974 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DTY81.08e-0550.00uncharacterized protein LOC111023974 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A5A7UC881.63e-0454.05Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A6J1C3981.69e-0451.16uncharacterized protein LOC111007859 isoform X3 OS=Momordica charantia OX=3673 G... [more]
A0A6J1C4J71.70e-0451.16uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 G... [more]
BLAST of MC08g_new0390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g_new0390.1MC08g_new0390.1mRNA