MC08g_new0294 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g_new0294
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Reverse transcriptase
Location	MC08: 15520515 .. 15532442 (+)
RNA-Seq Expression	MC08g_new0294
Synteny	MC08g_new0294

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCAATAATTGAAGGGAAATCTCCCATTACACATCCCAAAAGCCCTTGAGGGTAATTGGAAGACCAAAAAGACGTTGCTGAAACCCCCATTTTTACTAAAAAAATGGGCAGCTTTGTTACAAATTCGAGCGACATGGGCGAAAGAAAGCGATTCGAAGGACAGGGCGGGCGAGCGTACTTCCGTCAAGAGGTTCAGTTCATCACCTAATGTAGAGATTTCATCCATAAGAAGCCGAATTGTCAGGAGGGAATCAGATTCAAGTTCAAGGCATTTGCAATTCAAAGATCGAGCAAACCGCAGTCCTTATAGAATTCCTTTAATTTCAGCAATAAGTGGTGGAAGGGATTGAGGAAGGAAAACCGATTTGGCCGCTACCAAAGTGCCATCGGACTTGTGCAAGAGAAATCCCAGACCTGATGAAGAAGGTCTACATGCAGCATCTGTATTGAGCTTCAAATGGCCGTCACACGGAGGATTCCAAATCTGGCTATGGTGAGTTCTTCTAGTCTCTGGCACGGGCGGGGAAATGGCATTTTTAGCCTGTGAAAAGCTTTTAATATAAGATCGAATCCACTCACATTTTGATTCAGGTACAGAAATTTGCTTCCCATGAACCGTTGAATTTCGATCACACCAAATTGGCCAACAGGTAATCGCCGCTAACTCCTTCTTATCTGGGTTAATTTTATTGATCAGATCATCCCAAAAATCAAAGAAGCTTGGATTTGAATGTGCAGGGTACTTAGGTAGAGAGTGGAAAAAGAGTATGCCAAATCTTCCGAGCTCGCTTGCACTAAAAAATCGCATGGAAAATACTTTCTGGTTTGGATTTCCAGGGGAACATAAAGGTAACACATCTAAACTTCTGGAATGGAGAATCTGTGCTATTGGAAGATGATTATTAGCTGCCTTCCATAGAAATACTTTAATTTTTTAGGGAACAGCGAGTTTCTAGATTGATTGCCACTGATTTCCATGATAAGAATTGCTTGTAGAAGCTTCATTACATTTTAGGGGCATATATAGTTTATAGCCGCTCTTAACACTATAATACCCCCATTTGCCATAATGCCAAAGCCATGAATCGTGAAGATTACAAGGACTAATAGGCAATGCTAGAATAAGGCCTTTGTCTTCTTCACAGAAAATATTTGAGATTATATTTTCATCCTACATCCCTGCTTGATTTATTAAATCAGCAACCTTAAGATTTAGATTACCATTACCACCTAAAATCGGGAGGAAATTTAGAGGCCTAGGAATCTAAGGATCCAAAAAAACTCTTATTGTAGAGCCGTTACCAATACGAAGACGAAGCCCCTTAACAAGAAGCTCTTTACCCAACAAGAAACCTTTCCAAAAGTAGAAGGAATTCTTGGAAGTCTTAGAAAGGATCACAGAAGATTCCTGAAAATATTTAGTTTTCAAAACTTTGGAGATAAGGAGATTCGGATTTTGAAGAACCCTTCATACTTGTTTGGCCACCAGAGCTTTATTAATGCCTTCCAACTCTCTGAAGTTTAACCCTCCTAATTCTTTAGGATAGCACAGTCTTTCCCACTTCATCCAATGAAGTTTCCGAGTGTCGTTTGTTGAGCCCCACCAAAAACGCTCAAACATACGGGAAATATCATCACAGAAACCTTTTGGGAGCCTAAAGACACTCATAGTGTAGGATGGAATTGCTTGACCAATACTTTTAATGAGGACTTCTTTTCCTTCCATGGAGAAATAAGATCGCTTCCAGCCTTGAACTGCTTTCCAAATGTTGTCTTTCAGATAGCTCCAATCTAAACCTTTCCTTCTAGTGAAAGTTGAGGGTAACCCAAGATAATTTCCAAAATCAGTAACAAGATTAACATTGAGAATAGTTTGGAGATAAGCCTGTCTCTCGGGGTGCACATTTGGAGAGAAGATAAATGCAGACTTCAAAAAGTTTATACATTGTCCTGACGCTCCACCATAAGCTTCCAACAGCTTCTTAAGCGTAAGACATTCCATTTCCGATGCTTTGAGGAATATAAGACTATCATCTGCAAAAAGAAGATGAGAGATACAAGGTCCATGAGAATCAAATTTTAAACCAGTGAGAGTTCCGAATCTGTTTGCATTTTCAATCAGCACCGAAAGTCCTACATAAAATAAAAAAATAGGGGGAAAGTGGATCTCCTTGCCTAATTCCTCTTGATGGAGTGAAAGAGCCCGTTGGGAGACCATTAAGATGAATGGAAAAATTGACCATAGATAGATAGCACATAATTTGAGAAATCCAATGTTCATGAAACCCCAACCTCTTCATCAAACAACTAAGATAAGACCATTCAACCCTATCAAAAGCTTTGCTAAGATCAAGCTTTAATGCTCCCATGCCATTCAAGCCAATCTTGATGCCTCTAATGGAGTGAAGGCATTCATGACCAATAACTGTAACGTCCCGAGTCCCTCAGGTTAGTTAGTCTTTAATCGGGAGATTTTTTTTTTTTTTTTTATTTTTTTAAATTAAACTCTAATTAAATTTATATTTATCGGGCTCCGTGTGGTTGGTTTTGTCTTTAGTTGGGATGGGTTTCTTGTTCTCTTCGGCTTGGTCATGTGGGCCATTATTGGGTTGGGTTGGTTTTAAAACAAAGGAGAAAGAAAAAAAAATAATAAGGGAGAAAAAACAAAATAAAACACATTAGGATCTCATCTTCTTCTTCCTTTTGCCCTAGCCACCGTCACCCCCCCCCCCCCTCGTTAAATTTCTTCTTCGGCGACCACACCTCACGGCGGCAACGGAAGCGGCGACGCGACTTCGACCCGACGATCCGACGATCCACAGCAGCGGCGGCGCGACCTACTACCGGCGGCGTTCTTTTATTTTTCCGGCGTGCTGTAGCAACCTACGGCCAGCACACGTCAAGGCAGTTCGGTGATTCCGATAGCTCAGAATCACGGCGATTCCTTCGTTCCGGCAACGTTTGACCCTTACCTATCGTTGTTGAAGCCCGATTTAGGCTACCCACACCTTGGCGAGCTGGATCTAGGTGACCCACACCTATACGAAGTCGATTTTGGTGGTAATGAGTCAATTGAACCCTTTTAGAATTGATTTCGAAAGCTGAATAGTGTACGTAACTTGCTGTATTTTTCTGTTATAGTGCTTAGGTGTGAGATCGACGCAAAACTTAAGGGCGCGGTTGTGAGTAAATAGACAAGGGGCGTGTGCGTGCGTTAATGTGTGTCGGATGGCCTCTAATATGCAGTTTTTGTGATGTTCGATATTATTTTTGATACGCTGATGTGTTCGGTAGCTCTCGGTTGTGGTAATCTGTATACTTGGAGTGTTGTTGAATATTTGTCGGTGATAATGGTGTAAATTATGCTTTGCTAAACTGCTGAGAATTGCTGTGGGGATGTTGTTGTCTGAATATGCATGAATTGTTCGGCGTGTTTCGTGTGTTTATTACATCTAGCAATGCTTATTGAATTTTGATGTTGGATATTAAGTGTTTTGGGTGAACTGTGTTGGGCTCTAATTGTTTAAAATTTTTTTGGTTATGCTTTGTTGTGACAAAACTCATAGTGGAGCTGTGGTTAAGAAATGTTATATTGTGAAAGCATGATTGGTTTATCATTTCATCATTAGAATGTTGTTTATGTTGTGGAAGCATGCTGAATTGTGTTGGTGAGCTGAAAGCCGCATGGGTCATGGCTTAAGAAAGTATATGGTAAGACTCTGGTGAGAGTTGGATTCTAGGAGAAAGTGAATGGGTGAGGGTCAGGGCCTCGGGTATAAATGGTCGGGGGCTGATACGTCACTAATTGAGTATCGAAGCCTCGGGTAAAAATGGTCGAGGGACGATGCGAGGAGTCCTTTGGAAGGAAAGCTATTGGGGCCTTGGGTAAAAATGGTCAAGGGCCAATAGATGGTGAAGTTAGCGGGGTAGTGGGTAAAAATGGTCGAGGGCCGATGCGGTAGTGTCGGGGCTCTGGGTAAAAATGGTCAGGGGCCGACTCTACTCGAAGAAGTTAACTGTGGAGGGCTAGGATAGCTGTGATAAGCTTAGAGGTACTCGAGATGTTAGAGAGACTCGAGGTTGGTAGTTAATGTGTTCCGGGTTGTGGTTGTCATCGAATTTTATAGAATGTGCCTATGTTTGGTTATATAATGTGATGAAGAGCATGACTATGAATGTTTTCATGATTTTGTTGAGCATGATGCGTGCGAGTGTTGGTGAGGGCTACTTACGGAGTATATTTATATACTCACCCCCCCCTGCAATTATTGTTTCAGGTGAAGGATTTGTTGGTGACCATGGTGATGAGACGGAGGAGACATGACGAGCGAGGACCATAAGCTGCGTAGTTTACCTTTGCTTAGCTTAAGTTTAGTTGGTTAAGACCCTTTGTTTGGTCGATAAACTATTTGATCTTATCTGAATAATTGGGAGGTTCCCACTTGTTGTTTATTTTATTTCGGGATAGGTGTTTACTTTAGTTTTCTTCCATTCATTGAGTTTTGCCTAGCTGAAATAATAAATTTGCCTCGTGAGGTTGTCCACGGATGCTGTTGATTGATATCCTATGGAATTGATTTATTGTTAAATTGATGAGAGGTGAAGCTTGATTTTATATAATTATTGCACAGGGAGTTGACATCTCGTGTTTGGGGTTAAGTTTAAACAGTTGGATAGTTAACAAGACCTAGAAGCGTGTGGGAAATTCTGGGTCGTTACAATTGGTATCAGAGCAGAACCTCTCCCAGTAAGATGTGGTTCGGGGACAAACCAAGGCGGAAGCTGGTGGGCATGTGACGCCCGAGAGGAGGGGTACATGAATGAACCGATACCACATCCGAATGAGAGGGATCCTGAAATTATTGAAGAATGGTCAATAAAGGGTTAAAAAGAATTGATAGTCACTACCTATACCAACAAGGTGCAGCTTCCTTTTCGGTGGCTCAATCGTAAGAACTTCAAAGTTTAGCGTGCTTGGCTTGGAGCAATCTTAGGTTGGGTGACCTCCTAGTTGTTTTACTAGGAAGCATGTGAGTGAGGACAAAGCATGCTGGAAGGACTCGTGTTGGTCTGTAGGGGCAGTCTATGCTCTTTTAAGTGGTGCAGCCAGGTTGCAGGGGAATGTCAGGGCAGAGAGGTGCCGAGGTGGGATTCCGAATCCTGGGCCTGGGGCGTTACAGATGGTATCAGAGCGGAGTTGTTCCTGTAGACTGTCCTAGAATCTAGGTCGATAGGGTATGGTCCTTGTCAGTCTCCTCGTCATCACCAGGTACGTTTCCTAGTTCTGTTTGTTCGATCACCCTCAAGCTGAGGCCTACTGCGGCCGAGGAATGGGTCAGGGAGTTGGAAGTCCGTTATGTGTATTTGGGATGCTCCGACGATTTCAAGGTCCGGGGAGCAGTGTTTATGCTTCGGGGAGAAGCAGTAAATTGGTGGGAGTCGGTGGCGACAGCGGAGGATCACGCAAACGTACATGTCACGTGGGCAAGGTTTACGGACCTACTTTATGAGTACTATTTCCCCGTGACTGTCAGGAATGAAAAACAGGCAGAGTTTCTCCGTCTCACTCAAGGGAGCCTAACTGTGGCCTAATACGAGAGGAAGTTCACTGAGCTGTATCGTTTTGGAATGCAATATATTCCTACTAAGCAATTAAAGATTGACAAGTTCATTGACGGTTTGCGTAGGGAGATCAAGGGGCTACTTGTTCTCAAGGAACCAACTACATATGCAGCGGCAGTCAGGTGTGCGTTGGTTATGGACAAATGTCTCGAGGAGCCTCAGTCTCAGCAGGTGATAGGCTCCAGCTCGGGGGTCAAGAGGAAATTTGTATCGTTCTCCTCCAGCCAACCCTCAAGAGGACAGCAGCATCATGTGTAAAGGCAGACTGCTACTCCGGTGTGCCGCTCTTGTAAGAAGAGTCATGCTGGGCCATGTTGGTTGGGAAAAAGAATATGTTTCAGGTGCCAGAAGGAAGGACATTTCACAAGGGAGTGTCCGATGACCGGCTCGAATACCCAAGCATTAGGCCAGAAGACCCCTGCGACAGCGGCAGCTCAAGGCGGAACCCATAGGGCGCGTGTCTTCACTCTCACCAGGGGGGATGTTGAGCATGCCGAGGCGGTGGTCACAGGTACCCTCTCTTTGCGAGTTTTGAGTTATGTGTTTATGCTTGTGCTTTATAACATGCGTATTACTTTTGCAGGGACTGTTTTAGTGCTAGTATGCCTGCTTACACATTATTTGACTCTGGATCTAGTCATTCTTTCATTGCTTCTACCTTTGTTTGACATGCGGACCTAAAGCTAGAATCGTTAGGCTCTTTGTTGTCGGTTTCCACACCGTCAGGATCTGTGTTGGTCACTAGTCAAATGGTGAAAGGAGGCCAGCTCTCTTTCGATGGTCAGACCTTGGAGGTAGAGTTAATTCAACTGGATATGCAGGATTTCGATGTGATACTAAGCATGGATTGGTTAGCTGCTAACTGGGCTAATATTAATTGCTCAAAGAAGGAAGTTAGTTTTCGTTTGCCCTCCCGACAAAACTTTGCCTTTAAAGGAGTTAAGGCCGGGGTCCCAAGGGTGGTGTCGGCATTGAAGGCCAGCCATCTTTTCCAGCGTGGTGCTTGAGACTATTTGGCTAGCGTTGCGGATGCAAGGAAGGTTGTGCCAAGCATTGAGGCGGTTCGTGTGGTTAATGAGTTCATTGACGTGTTCCCTGAGGACCTCCCCGGCTTGCCTCCGTTTCGCGAAGTGGACTTTTGTATAAAGTTGCTGCCAGGGACGGCTCCCATCTCGAAAGCACCTTATCGAATAGCTCCGGCAGAGTTGAAAGAGCTGAAGCTACAGTTGGAAGAATTACTCGACAAGGGTTTCATCCGCCCAAGCGTGTCCCCTTGGGGTGCGCCCGTGCTCTTTGTTAAGAAGAAAGACGGTTCTATACGACTTTGTATAGACTACAGGACAAAGTTACGGTTAAGAATAAGTATCCCCTACCACGTATTGATGACCTTTTTTATTAGCTTCAGGGAGCGAAAGTGTTCTCGAAGATAGACTTGCGTTCGGGGTACCACCAGTTAAGGTTAAAGGAGGCCGACATTCCAAAGACAACGTTCAGAACGAGGTATGGCCACTATGAGTTTATCATGATGTCTTTTGGACTCACAAATGCTCCGGTAGCCTTTATGGATCTAATGATCGGGTCATAAGGGATTATTTAGATTCATTTGTTATTGTGTTTATCGATGACATCTTGATTTACTCCAGTACTGAGAAGTGTCACGAGGAGCATCTCAGACAGGTTTTGACTACACTACGAGAAAATAAGTTGTATGCAAAGTTTTCAAAGTGTGAGTTCTGGCTGGACAAAGTGGCTTTCCTAGGTCACATAGTCAATAGGGATGGTGTTGCAGTAGACCCCGCCAAGGTAGAGGCTGTTAGTAATTGGCCAAGACCTAGTTCAGTTATAGAGATTCGTAGTTTCCTCGGCTTGGCTGGTTACTACAGGAAGTTCATCCAGAATTTCTCTCGTTTAGCGGCACCGTTGACGCAGTTGACTCGTAAGAATGCTACCTTCACTTGGAGTAGCGAGTGTGAGGAGACTTTTCAAGAACTGAAGAAGCGTTTGGTGTCTGCACCGGTGTTAACTGTCCCCGATGGAACGGGAGGTTTGGTGGTTTACAGCGACGCCTCGCGAAAGGGCTTGGGATGTGTTCTGATGCAACATGGGAAGGTTATAGCTTATGCTTCTCGACAGCTGAAGGTGCATGAGCTTAACTACCCCACTCATGACTTAGAGCTAGCAGCAGTGGTCTTCGCCTTAATGTTATCGAGGCACTACCTTTACGGAGAAAGAATTCAGGTCTTCACGGATCATCAGAGTTTGAAGTACCTTTTCACTCAGAAGGAGCTTAACTTAAGACAGAGACGGTGGCTAGAGTTGGTGAAGGACTATGATTGTGAGATTAGTTACCATCCGGGTAAAGTGAACGTGGTGGCCGATGCTCTTAGTAGAAAGGCGGCAAGTGTGGCAGCTTTAGTAGCGGCCTGCAGTCCAATGCACAGCGAGTTAAAACACTTGGAGGTGGAGCTGACGGTGGATGATATCTCAGCGTTGTTGGCTCGAGTCTCAGTGGAACCTAGCTTGAGACAGAGGATCATTGTTGCCCAAAAGGGAGATCCTAGCTTGGCCAAAGGCTTTAGTATGGTCGGCCATGGAGATTTCACTCTTTCGGGTGAGGCAACCTTGCTTTTTCGCAGAAGGTTGTGTGTGCCAAAAGATTATTCTTTGAGGAACGACTTACTGGGAGAGGCACACAATGCTCCATTCTCGGTTCATCCAGGAAGCACCAAAATGTATCAAGACCTCAAGAAACATTATTGGTGTCATAACATGAAGAGGGAAATAGCTCAGTTTGTCAGCAAGTGTTTAACATGCCAGCAGGTGAAGGCTTCAAGACAGAGACCTGCTGGATTGCTGCAACCTTTGAGCATACCAGTTTGGAAGTGGGACGATGTGGCGATGGACTTCATCACAGGACTACCAAGGACGGTTAAGGGATTTACTGTGATATGGGTAGTTGTAGATCGTTTGACCAAATCTGCTCACTTTATTCCAGGCAAGGCCACGTATACGGTAGAAAAATGGGCGGAACTGTATTTGCAGGAAATTGTCCGGCTACACGGTATACCTGTATCCACAGTGTCCGATCGCGACCCGCATTTCATCTTGACGTTTTGGCGGAGTTTACACAAGTCCCTTGGCACTAAGTTGGACTTTAGCACAGCGTTTCATCCCCAAACTGATGGTCAAACAGAGCGGGTGAACCAGGTTTTAGAGGACATGCTCAGAGCTTGCATGTTAGACTTTGGTGGTAGTTGGGACAAGTATCTCTACCTAATAGAGTTCGCCTATAATAACAGTTTTCAGGCCACGATTGGGATAGCTCCATACGAGGCACTATATGGGAAGAAATGTCGGTCTCCGATTAATTGGGACGAAGTCGGAGAAAGAGTCCTCTTGGGACCGGATTTGGTATAGGTGACTAACAGTGCCATTCAAAAGATCAGGGGAAGGATGCAAATTGCTCAGAGCCGTCAGAAGAGTTATGCAGACATCAGGCGTAAGGAACTCGAGTTCGTGGTAGGTGAGCGGGTGTTTCTTCGTGTGGCACCCGTGAAGGGAATTTTACGCTTTGGGAAGAAAGGGAAGCTCAGCGCAAGATTCATTGGGCCTTTTGAGATTTTGGAATGTATCGGCCCAGTCGCGTATAGGCTGGCTTTGCCACCATCGTTGGTTGCGGTTCACAATGTGTTTCACGTGTCCATGCTGAGGAGGTACATTCATGACCCTTCGCACGTTTTGGATCCTGAACCATTACAACTAGATGAGTCCTTGTGCTACGAAGAGGTACCTGTCAAAATTTTGGCAAGAGAAACCAAGTTGTTAAGGAATCGGAAGATTCACTTGGTTAAGATTTTGTGGAGAAACCACCAAGTGGAAGAGGCTACTTGGGAACGGGAGGACGATATTAAGGCGAGATACCTGAACTGCTGGAACAGTCAACTTTCGGGGACGAAAGTTTTTGAAGGAGGAAAGTCTGTAACGCCCCGAGTCCCTCAGGTTAGTTAGTCTCGAATCGGGAGATTTTTATTTTTATTTATTTTTTTAAAAAAATTAAACTCTAATTAAATTTATATTTATCGAGCTCCGTGTGGTTGGTTTTGTCTTTAGTTGGGATGGGTTTCTTGTTCTCTTGGGCTTGACCATGTGGGCCTTTATTGGGTTGGGTTGGTTTTAAAACAAAGGAGAAAGAAAAAAAAAAGAATAAGGGAGAAAAAACAAAATAAAACACATTAGGCTCTCATCTTCTTCTTCCTTTTACCCTAGCCACCGTCACACCCCCCCTTCTTTAAATTTCTTCTCCGGCGACCACAACTCACGGCGGCAACGGAAGCGGCGACGCCTCCTCGAAACAGCAGCAGCGGCGGCCGACGACCACCCTCGTAAAAGTAGCAGCGGCGGACGGCGAACCATCCAGCGGCGGCGCGACTTCGACCCGACGTCCCGACGATCCACAGCAGCGGCGGCGCGACCTACTCCCGACGGCGTTCTTTTATTTTTCCAGCGTGCTGTAGCAACCCACGGCCAGCACACGTCAATGCAGTTCGGTGATTCCGATAGCCCAGAATCACGACGATTCTTTCGTTCCGACAACGTTTGACGCTTACCCATCGTCGTTGAAGCCCGATTTAGGCTACCCACACCTTGGCGAGCTAGATCTTGGTGACCCACACCTATACGAAGTCGATTTTGGTGGTAATGAGTCATTTGAACCCTTTTAGAATTGATTTCGAAGGCTGAATAGTGTACGTAACTTGCTGTATTTTTCTGTTTTAGTGCTTAGGTGTGAGATCGACGCAAAACTTAAGGGTGCGGTTGTGAGTAAGTAGACAAGGGGCGTGTGCGTGCGTTAATGTGTGTCAGATGACCTCTAATATGCTGTTTTTGTGATGTTCGATATTATTTTTGATACGCTGATGTGTTCGGTAGCTCTCAGTTGTGGTAATCTGTATACTTGGAATGTTGTTGAATATTTGTCGGTGATAATGGTGTAAATTATGCTTTGCTAAACTGCTGAGAATTGCTGTGGGGATGTTGTCTGAATATGCATGAATTGTTCGGCGTGTTTCGTGTGTTTATTACATCTAGCAATTCTTATTGAATTTTGATGTTGGATATTAAGTATTTTGGGTGAACTGTGTTGGGCTCTAATTGTTTAAAATTTGTTTGGTTATGCTTTGTTGTGACAAAAGTCATAGTGGAGCTGTGGTTAAGAAATGTTATATTGTGAAAGCATAATTGATTTATCATTTCATCATTAGAATGTTGTTTATGTTGTGGAAGCATGCTGAATTGTGTTGGTGAGCTGAAAGCCGCATGGGTCATGGCTTAAGAAAGTATATGGTAAGACTCTGGTGAGAGTTGGATTCTTGGAGAAAGTGAATGGGTGAGTGTCAGGGTCTCGGGTATAAATGGTCGGGGGCTGATACGTCACTAATTGAGTATCGAGGCCTCGGGTAAAAATGGTCGAGGGTCGATGCGAGGAGTCCTTTGGAAGGAAAGCTATTGGGGTCTTGGGTAAAAATGGTCAAGGGCCGATAGATGGTGAAGTCATCGGGGCCTTGGGTAAAAATGGTCGAGGGCCGATGCGGTAGTGTCGGGGCTCTGGGTAAAAATGGTCGAGGGCCGATGTGGTAGTGTCGGGGCTCTGGGTAAAAATGGTCAGGGGCCGACTCTACTCGAATAAGTTAGCTGTGGAGGGCTAGGATAGCTGTGATAAGCTTAGAGGTACTCGAGATGTTAGAGAGACTCGAGGTTGGTAGTTAATGTGTTCCTGGTTGTGGTTGTCACCGAATTTTATAGAATGTGTCTATGTTTGGTTATATAATGTGATGAAGAGCATGACTATGAATGTTTTCATGATTTCTTTGAGCATGATGCGTGCGAGTGTTGGTGAGGGCTACTTACGAAGTATATTTATATACTCACCCCCCCTGCAATTATTGTTTCAGGTGAAGGATTTGTTGGTGACCATGGTGATGAGACGGAGGAGACATGAGAGGTGAAGCTTGATTTTATATAATTATTGCACAGGGAGTTGACATCTCGTGTTTGGGGTTAAGTTTAAACAGTTGGGTAGTTAACGTGATCTAGAAGCGTGTTGGAAATTATTGGTCGTTATAATAATAATCGTCTCAAAAATGTTATTTGTTATGCTATCTCTGATGCCCAGTTAGTCTTTGTTCCTCATCGAGTCATCACAGACAATATAAATTATATTTAACTTTCCTAATGTATGCTATTAGAGCCAAATTAAAACATTAATTCAATTTTGTCCCTAGAATTATAAAATTTCACAAATTTACC

mRNA sequence

ATGCAACATGGGAAGGTTATAGCTTATGCTTCTCGACAGCTGAAGGTGCATGAGCTTAACTACCCCACTCATGACTTAGAGCTAGCAGCAGTGGTCTTCGCCTTAATGTTATCGAGGCACTACCTTTACGGAGAAAGAATTCAGGTCTTCACGGATCATCAGAGTTTGAAGTACCTTTTCACTCAGAAGGAGCTTAACTTAAGACAGAGACGGTGGCTAGAGTTGGTGAAGGACTATGATTGTGAGATTAGTTACCATCCGGGTAAAGTGAACGTGGTGGCCGATGCTCTTAGTAGAAAGGCGGCAAGTGTGGCAGCTTTAGTAGCGGCCTGCAGTCCAATGCACAGCGAGTTAAAACACTTGGAGGTGGAGCTGACGGTGGATGATATCTCAGCGTTGTTGGCTCGAGTCTCAGTGGAACCTAGCTTGAGACAGAGGATCATTGTTGCCCAAAAGGGAGATCCTAGCTTGGCCAAAGGCTTTAGTATGGTCGGCCATGGAGATTTCACTCTTTCGGGTGAGGCAACCTTGCTTTTTCGCAGAAGGTTGTGTGTGCCAAAAGATTATTCTTTGAGGAACGACTTACTGGGAGAGGCACACAATGCTCCATTCTCGGTTCATCCAGGAAGCACCAAAATGTATCAAGACCTCAAGAAACATTATTGGTGTCATAACATGAAGAGGGAAATAGCTCAGTTTGTCAGCAAGTGTTTAACATGCCAGCAGGTGAAGGCTTCAAGACAGAGACCTGCTGGATTGCTGCAACCTTTGAGCATACCAGTTTGGAAGTGGGACGATGTGGCGATGGACTTCATCACAGGACTACCAAGGACGGTTAAGGGATTTACTGTGATATGGGTAGTTGTAGATCGTTTGACCAAATCTGCTCACTTTATTCCAGGCAAGGCCACGTATACGGTAGAAAAATGGGCGGAACTGTATTTGCAGGAAATTGTCCGGCTACACGGTATACCTGTATCCACAGTGTCCGATCGCGACCCGCATTTCATCTTGACGTTTTGGCGGAGTTTACACAAGTCCCTTGGCACTAAGTTGGACTTTAGCACAGCGTTTCATCCCCAAACTGATGGTCAAACAGAGCGGGTGAACCAGGTTTTAGAGGACATGCTCAGAGCTTGCATGTTAGACTTTGGTGGTAGTTGGGACAAGTATCTCTACCTAATAGAGTTCGCCTATAATAACAGTTTTCAGGCCACGATTGGGATAGCTCCATACGAGGCACTATATGGGAAGAAATGTCGGTCTCCGATTAATTGGGACGAAGTCGGAGAAAGAGTCCTCTTGGGACCGGATTTGGTATAG

Coding sequence (CDS)

ATGCAACATGGGAAGGTTATAGCTTATGCTTCTCGACAGCTGAAGGTGCATGAGCTTAACTACCCCACTCATGACTTAGAGCTAGCAGCAGTGGTCTTCGCCTTAATGTTATCGAGGCACTACCTTTACGGAGAAAGAATTCAGGTCTTCACGGATCATCAGAGTTTGAAGTACCTTTTCACTCAGAAGGAGCTTAACTTAAGACAGAGACGGTGGCTAGAGTTGGTGAAGGACTATGATTGTGAGATTAGTTACCATCCGGGTAAAGTGAACGTGGTGGCCGATGCTCTTAGTAGAAAGGCGGCAAGTGTGGCAGCTTTAGTAGCGGCCTGCAGTCCAATGCACAGCGAGTTAAAACACTTGGAGGTGGAGCTGACGGTGGATGATATCTCAGCGTTGTTGGCTCGAGTCTCAGTGGAACCTAGCTTGAGACAGAGGATCATTGTTGCCCAAAAGGGAGATCCTAGCTTGGCCAAAGGCTTTAGTATGGTCGGCCATGGAGATTTCACTCTTTCGGGTGAGGCAACCTTGCTTTTTCGCAGAAGGTTGTGTGTGCCAAAAGATTATTCTTTGAGGAACGACTTACTGGGAGAGGCACACAATGCTCCATTCTCGGTTCATCCAGGAAGCACCAAAATGTATCAAGACCTCAAGAAACATTATTGGTGTCATAACATGAAGAGGGAAATAGCTCAGTTTGTCAGCAAGTGTTTAACATGCCAGCAGGTGAAGGCTTCAAGACAGAGACCTGCTGGATTGCTGCAACCTTTGAGCATACCAGTTTGGAAGTGGGACGATGTGGCGATGGACTTCATCACAGGACTACCAAGGACGGTTAAGGGATTTACTGTGATATGGGTAGTTGTAGATCGTTTGACCAAATCTGCTCACTTTATTCCAGGCAAGGCCACGTATACGGTAGAAAAATGGGCGGAACTGTATTTGCAGGAAATTGTCCGGCTACACGGTATACCTGTATCCACAGTGTCCGATCGCGACCCGCATTTCATCTTGACGTTTTGGCGGAGTTTACACAAGTCCCTTGGCACTAAGTTGGACTTTAGCACAGCGTTTCATCCCCAAACTGATGGTCAAACAGAGCGGGTGAACCAGGTTTTAGAGGACATGCTCAGAGCTTGCATGTTAGACTTTGGTGGTAGTTGGGACAAGTATCTCTACCTAATAGAGTTCGCCTATAATAACAGTTTTCAGGCCACGATTGGGATAGCTCCATACGAGGCACTATATGGGAAGAAATGTCGGTCTCCGATTAATTGGGACGAAGTCGGAGAAAGAGTCCTCTTGGGACCGGATTTGGTATAG

Protein sequence

MQHGKVIAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYGERIQVFTDHQSLKYLFTQKELNLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVAACSPMHSELKHLEVELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLAKGFSMVGHGDFTLSGEATLLFRRRLCVPKDYSLRNDLLGEAHNAPFSVHPGSTKMYQDLKKHYWCHNMKREIAQFVSKCLTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWVVVDRLTKSAHFIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKSLGTKLDFSTAFHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATIGIAPYEALYGKKCRSPINWDEVGERVLLGPDLV

Homology

[Close]

BLAST of MC08g_new0294 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 213.8 bits (543), Expect = 4.0e-54
Identity = 146/454 (32.16%), Postives = 225/454 (49.56%), Query Frame = 0


Query: 6    VIAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYGERIQVFTDHQSLKYLFTQKEL 65
            V+ Y S+ L+  + NYP  +LEL  ++ AL   R+ L+G+   + TDH SL  L  + E 
Sbjct: 941  VVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEP 1000

Query: 66   NLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVA---------------- 125
              R +RWL+ +  YD  + Y  G  NVVADA+SR   ++    +                
Sbjct: 1001 ARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAIYTITPETSRPIDTESWKSYYKSDP 1060

Query: 126  ACSPMHSELKHL-EVELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLAKGFSMVGHGD 185
             CS +   +K L +  +T +D+SA         S ++++ +++    +  K +S+     
Sbjct: 1061 LCSAVLIHMKELTQHNVTPEDMSAF-------RSYQKKLELSE----TFRKNYSL----- 1120

Query: 186  FTLSGEATLLFRRRLCVPKDYSLRNDLLGEAH-NAPFSVHPGSTKMYQDLKKHYWCHNMK 245
                 +  + ++ RL VP     +N ++   H +  F  H G T     +   Y+   ++
Sbjct: 1121 ----EDEMIYYQDRLVVP--IKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQ 1180

Query: 246  REIAQFVSKCLTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWV 305
              I Q++  C+ CQ +K+ R R  GLLQPL I   +W D++MDF+TGLP T     +I V
Sbjct: 1181 HSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILV 1240

Query: 306  VVDRLTKSAHFIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKS 365
            VVDR +K AHFI  + T    +  +L  + I   HG P +  SDRD       ++ L K 
Sbjct: 1241 VVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKR 1300

Query: 366  LGTKLDFSTAFHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATI 425
            LG K   S+A HPQTDGQ+ER  Q L  +LRA +     +W  YL  IEF YN++   T+
Sbjct: 1301 LGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTNIQNWHVYLPQIEFVYNSTPTRTL 1360

Query: 426  GIAPYEALYGKKCRSPI--NWDEVGERVLLGPDL 440
            G +P+E   G    +P   + DEV  R     +L
Sbjct: 1361 GKSPFEIDLGYLPNTPAIKSDDEVNARSFTAVEL 1372

[Close]

BLAST of MC08g_new0294 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 213.4 bits (542), Expect = 5.2e-54
Identity = 146/454 (32.16%), Postives = 224/454 (49.34%), Query Frame = 0


Query: 6    VIAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYGERIQVFTDHQSLKYLFTQKEL 65
            V+ Y S+ L+  + NYP  +LEL  ++ AL   R+ L+G+   + TDH SL  L  + E 
Sbjct: 915  VVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEP 974

Query: 66   NLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVA---------------- 125
              R +RWL+ +  YD  + Y  G  NVVADA+SR   ++    +                
Sbjct: 975  ARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVYTITPETSRPIDTESWKSYYKSDP 1034

Query: 126  ACSPMHSELKHL-EVELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLAKGFSMVGHGD 185
             CS +   +K L +  +T +D+SA         S ++++ +++    +  K +S+     
Sbjct: 1035 LCSAVLIHMKELTQHNVTPEDMSAF-------RSYQKKLELSE----TFRKNYSL----- 1094

Query: 186  FTLSGEATLLFRRRLCVPKDYSLRNDLLGEAH-NAPFSVHPGSTKMYQDLKKHYWCHNMK 245
                 +  + ++ RL VP     +N ++   H +  F  H G T     +   Y+   ++
Sbjct: 1095 ----EDEMIYYQDRLVVP--IKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQ 1154

Query: 246  REIAQFVSKCLTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWV 305
              I Q++  C+ CQ +K+ R R  GLLQPL I   +W D++MDF+TGLP T     +I V
Sbjct: 1155 HSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILV 1214

Query: 306  VVDRLTKSAHFIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKS 365
            VVDR +K AHFI  + T    +  +L  + I   HG P +  SDRD       ++ L K 
Sbjct: 1215 VVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKR 1274

Query: 366  LGTKLDFSTAFHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATI 425
            LG K   S+A HPQTDGQ+ER  Q L  +LRA       +W  YL  IEF YN++   T+
Sbjct: 1275 LGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTNIQNWHVYLPQIEFVYNSTPTRTL 1334

Query: 426  GIAPYEALYGKKCRSPI--NWDEVGERVLLGPDL 440
            G +P+E   G    +P   + DEV  R     +L
Sbjct: 1335 GKSPFEIDLGYLPNTPAIKSDDEVNARSFTAVEL 1346

[Close]

BLAST of MC08g_new0294 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.9e-49
Identity = 113/420 (26.90%), Postives = 205/420 (48.81%), Query Frame = 0


Query: 7    IAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYG--ERIQVFTDHQSLKYLFTQKE 66
            + Y S ++   +LNY   D E+ A++ +L   RHYL    E  ++ TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVAACSPMHSELKHLE 126
               N R  RW   ++D++ EI+Y PG  N +ADALSR       +V    P+  +     
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKD----- 854

Query: 127  VELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLAKGFSMVGHGD------FTLSGEAT 186
               + D+    + ++S+    + +++     D  L    +++ + D        L     
Sbjct: 855  ---SEDNSINFVNQISITDDFKNQVVTEYTNDTKL---LNLLNNEDKRVEENIQLKDGLL 914

Query: 187  LLFRRRLCVPKDYSLRNDLLGEAHNAPFSVHPGSTKMYQDLKKHYWCHNMKREIAQFVSK 246
            +  + ++ +P D  L   ++ + H     +HPG   +   + + +    ++++I ++V  
Sbjct: 915  INSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQN 974

Query: 247  CLTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWVVVDRLTKSA 306
            C TCQ  K+   +P G LQP+      W+ ++MDFIT LP +  G+  ++VVVDR +K A
Sbjct: 975  CHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMA 1034

Query: 307  HFIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKSLGTKLDFST 366
              +P   + T E+ A ++ Q ++   G P   ++D D  F    W+         + FS 
Sbjct: 1035 ILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSL 1094

Query: 367  AFHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATIGIAPYEALY 417
             + PQTDGQTER NQ +E +LR        +W  ++ L++ +YNN+  +   + P+E ++
Sbjct: 1095 PYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of MC08g_new0294 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.9e-49
Identity = 113/420 (26.90%), Postives = 205/420 (48.81%), Query Frame = 0


Query: 7    IAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYG--ERIQVFTDHQSLKYLFTQKE 66
            + Y S ++   +LNY   D E+ A++ +L   RHYL    E  ++ TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVAACSPMHSELKHLE 126
               N R  RW   ++D++ EI+Y PG  N +ADALSR       +V    P+  +     
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKD----- 854

Query: 127  VELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLAKGFSMVGHGD------FTLSGEAT 186
               + D+    + ++S+    + +++     D  L    +++ + D        L     
Sbjct: 855  ---SEDNSINFVNQISITDDFKNQVVTEYTNDTKL---LNLLNNEDKRVEENIQLKDGLL 914

Query: 187  LLFRRRLCVPKDYSLRNDLLGEAHNAPFSVHPGSTKMYQDLKKHYWCHNMKREIAQFVSK 246
            +  + ++ +P D  L   ++ + H     +HPG   +   + + +    ++++I ++V  
Sbjct: 915  INSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQN 974

Query: 247  CLTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWVVVDRLTKSA 306
            C TCQ  K+   +P G LQP+      W+ ++MDFIT LP +  G+  ++VVVDR +K A
Sbjct: 975  CHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMA 1034

Query: 307  HFIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKSLGTKLDFST 366
              +P   + T E+ A ++ Q ++   G P   ++D D  F    W+         + FS 
Sbjct: 1035 ILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSL 1094

Query: 367  AFHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATIGIAPYEALY 417
             + PQTDGQTER NQ +E +LR        +W  ++ L++ +YNN+  +   + P+E ++
Sbjct: 1095 PYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of MC08g_new0294 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.9e-49
Identity = 113/420 (26.90%), Postives = 205/420 (48.81%), Query Frame = 0


Query: 7    IAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYG--ERIQVFTDHQSLKYLFTQKE 66
            + Y S ++   +LNY   D E+ A++ +L   RHYL    E  ++ TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVAACSPMHSELKHLE 126
               N R  RW   ++D++ EI+Y PG  N +ADALSR       +V    P+  +     
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKD----- 854

Query: 127  VELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLAKGFSMVGHGD------FTLSGEAT 186
               + D+    + ++S+    + +++     D  L    +++ + D        L     
Sbjct: 855  ---SEDNSINFVNQISITDDFKNQVVTEYTNDTKL---LNLLNNEDKRVEENIQLKDGLL 914

Query: 187  LLFRRRLCVPKDYSLRNDLLGEAHNAPFSVHPGSTKMYQDLKKHYWCHNMKREIAQFVSK 246
            +  + ++ +P D  L   ++ + H     +HPG   +   + + +    ++++I ++V  
Sbjct: 915  INSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQN 974

Query: 247  CLTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWVVVDRLTKSA 306
            C TCQ  K+   +P G LQP+      W+ ++MDFIT LP +  G+  ++VVVDR +K A
Sbjct: 975  CHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMA 1034

Query: 307  HFIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKSLGTKLDFST 366
              +P   + T E+ A ++ Q ++   G P   ++D D  F    W+         + FS 
Sbjct: 1035 ILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSL 1094

Query: 367  AFHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATIGIAPYEALY 417
             + PQTDGQTER NQ +E +LR        +W  ++ L++ +YNN+  +   + P+E ++
Sbjct: 1095 PYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of MC08g_new0294 vs. NCBI nr
Match: KAA0062835.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 648 bits (1671), Expect = 7.49e-228
Identity = 306/443 (69.07%), Postives = 374/443 (84.42%), Query Frame = 0


Query: 1   MQHGKVIAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYGERIQVFTDHQSLKYLF 60
           MQ GKV+AYASRQLK HE NYPTHDLELAA+VFAL + RH+LYGE+IQ+FTDH+SLKY F
Sbjct: 141 MQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHFLYGEKIQIFTDHKSLKYFF 200

Query: 61  TQKELNLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVAACSPMHSELKH 120
           TQKELN+RQRRWLELVKDYD EI YHPGK NVVADALSRK +  AAL+   +P+H +L+ 
Sbjct: 201 TQKELNMRQRRWLELVKDYDREILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 260

Query: 121 LEVELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLA--KGFSMVGHG-DFTLSGEATL 180
            E+ ++V  ++  LA+++V+P+LRQRII AQ  DP L   +G +  G   +F+LS +  L
Sbjct: 261 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL 320

Query: 181 LFRRRLCVPKDYSLRNDLLGEAHNAPFSVHPGSTKMYQDLKKHYWCHNMKREIAQFVSKC 240
           LF RRLCVP D +++ +LL EAH++PFS+HPGSTKMYQDLK+ YW  NMKRE+A+FVS+C
Sbjct: 321 LFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRC 380

Query: 241 LTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWVVVDRLTKSAH 300
           L CQQVKA RQ+PAGLLQPLSIP WKW++V+MDFITGLPRT++GFTVIWVVVDRLTKSAH
Sbjct: 381 LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 440

Query: 301 FIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKSLGTKLDFSTA 360
           F+PGK+TYT  KWA+LY+ EIVRLHG+PVS VSDRD  F   FW+ L  ++GT+LDFSTA
Sbjct: 441 FVPGKSTYTANKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 500

Query: 361 FHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATIGIAPYEALYG 420
           FHPQTDGQTER+NQVLE+MLRAC L+F GSWD +L+L+EFAYNNS+QATIG+AP+EALYG
Sbjct: 501 FHPQTDGQTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 560

Query: 421 KKCRSPINWDEVGERVLLGPDLV 440
           K CRSP+ W EVGE+ L+GP+LV
Sbjct: 561 KCCRSPVCWGEVGEQRLMGPELV 583

[Close]

BLAST of MC08g_new0294 vs. NCBI nr
Match: KAA0064005.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 647 bits (1669), Expect = 1.51e-227
Identity = 307/443 (69.30%), Postives = 371/443 (83.75%), Query Frame = 0


Query: 1   MQHGKVIAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYGERIQVFTDHQSLKYLF 60
           MQ GKV+AYASRQLK HE NYPTHDLELAAVVFAL + RHYLYGE+IQ+FTDH+SLKY F
Sbjct: 1   MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60

Query: 61  TQKELNLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVAACSPMHSELKH 120
           TQKELN+RQRRWLELVKDYDCEI YHPGK NVVADALSRK +  AAL+   +P+H +L+ 
Sbjct: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITWQAPLHRDLER 120

Query: 121 LEVELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLA--KGFSMVGHG-DFTLSGEATL 180
            E+ ++V  ++  LA+++V+P+LRQRII AQ  DP L   +G +      +F+LS +  L
Sbjct: 121 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEARQTTEFSLSSDGGL 180

Query: 181 LFRRRLCVPKDYSLRNDLLGEAHNAPFSVHPGSTKMYQDLKKHYWCHNMKREIAQFVSKC 240
           LF  RLCVP D  ++ +LL EAH++PFS+HPGSTKMYQDLK+ YW  NMKRE+A+FVSKC
Sbjct: 181 LFEGRLCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKC 240

Query: 241 LTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWVVVDRLTKSAH 300
           L CQQVKA RQ+PAGLLQPLSIP WKW++V+MDFITGLPRT++GFTVIWVVVDRLTKSAH
Sbjct: 241 LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 300

Query: 301 FIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKSLGTKLDFSTA 360
           F+PGK+TYT  KWA+LY+ EIVRLHG+PVS VSDRD  F   FW+ L  ++GT+LDFSTA
Sbjct: 301 FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 360

Query: 361 FHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATIGIAPYEALYG 420
           FHPQTDGQTER+NQVLEDMLRAC L+F GSWD +L+L+EFAYNNS+QATIG+ P+EALYG
Sbjct: 361 FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMTPFEALYG 420

Query: 421 KKCRSPINWDEVGERVLLGPDLV 440
           + CRSP+ W EVGE+ L+GP+LV
Sbjct: 421 RCCRSPVCWGEVGEQRLMGPELV 443

[Close]

BLAST of MC08g_new0294 vs. NCBI nr
Match: KAA0035938.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 654 bits (1686), Expect = 2.17e-227
Identity = 309/443 (69.75%), Postives = 373/443 (84.20%), Query Frame = 0


Query: 1   MQHGKVIAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYGERIQVFTDHQSLKYLF 60
           MQ GKV+AYASRQLK HE NYPTHDLELAAVVFAL + RHYLYGE+IQ+FTDH+SLKY F
Sbjct: 191 MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 250

Query: 61  TQKELNLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVAACSPMHSELKH 120
           TQKELN+RQRRWLELVKDYDCEI YHPGK NVV DALSRK +  AAL+   +P+H +L+ 
Sbjct: 251 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSHSAALITRQAPLHRDLER 310

Query: 121 LEVELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLA--KGFSMVGH-GDFTLSGEATL 180
            E+ ++V  ++  LA+++V+P+LRQRII AQ  DP L   +G +  G   +F+LS +  L
Sbjct: 311 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGL 370

Query: 181 LFRRRLCVPKDYSLRNDLLGEAHNAPFSVHPGSTKMYQDLKKHYWCHNMKREIAQFVSKC 240
           LF  RLCVP D +++ +LL EAH++PFS+HPGSTKMYQDLK+ YW  NMKRE+A+FVSKC
Sbjct: 371 LFESRLCVPSDSAIKTELLTEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKC 430

Query: 241 LTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWVVVDRLTKSAH 300
           L CQQVKA RQ+PAGLLQPLSIP WKW++V+MDFITGLPRT++GFTVIWVVVDRLTKSAH
Sbjct: 431 LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 490

Query: 301 FIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKSLGTKLDFSTA 360
           F+PGK+TYT  KWA+LY+ EIVRLHG+PVS VSDRD  F   FW+ L  ++GT+LDFSTA
Sbjct: 491 FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 550

Query: 361 FHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATIGIAPYEALYG 420
           FHPQTDGQTER+NQVLEDMLRAC L+F GSWD +L+L+EFAYNNS+QATIG+AP+EALYG
Sbjct: 551 FHPQTDGQTERLNQVLEDMLRACALEFPGSWDAHLHLMEFAYNNSYQATIGMAPFEALYG 610

Query: 421 KKCRSPINWDEVGERVLLGPDLV 440
           K CRSP+ W EVGE+ L+GP+LV
Sbjct: 611 KCCRSPVCWGEVGEQRLMGPELV 633

[Close]

BLAST of MC08g_new0294 vs. NCBI nr
Match: KAA0068114.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 644 bits (1662), Expect = 1.74e-226
Identity = 305/443 (68.85%), Postives = 370/443 (83.52%), Query Frame = 0


Query: 1   MQHGKVIAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYGERIQVFTDHQSLKYLF 60
           MQ GKV+AYASRQLK HE NYPTHDLELAAVVFAL + RHYLYGE+IQ+FTDH+SLKY F
Sbjct: 1   MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60

Query: 61  TQKELNLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVAACSPMHSELKH 120
           TQKELN+RQRRWLELVKDYDCEI YHPGK NVVADAL+RK +  AAL+   +P+H +L+ 
Sbjct: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALNRKVSHSAALITRQAPLHRDLER 120

Query: 121 LEVELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLA--KGFSMVGHG-DFTLSGEATL 180
            E+ ++V  ++  LA+++V+P+LRQRII AQ  DP L   +G +  G   +F+LS +  L
Sbjct: 121 AEIAVSVGAVTKQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL 180

Query: 181 LFRRRLCVPKDYSLRNDLLGEAHNAPFSVHPGSTKMYQDLKKHYWCHNMKREIAQFVSKC 240
           LF RRLCVP D +++ +LL EAH++PFS+HPGSTKMYQDLK+ YW  NMKRE+A+FVS+C
Sbjct: 181 LFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRC 240

Query: 241 LTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWVVVDRLTKSAH 300
           L CQQVKA RQ+PAGLLQ LSI  WKW++V+MDFITGLPRT++GFTVIWVVVDRLTKSAH
Sbjct: 241 LVCQQVKAPRQKPAGLLQHLSITEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 300

Query: 301 FIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKSLGTKLDFSTA 360
           F+PGK+TYT  KWA+LY+ EIVRLHG+PVS +SDRD  F   FW+ L  ++GT LDFSTA
Sbjct: 301 FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIISDRDARFTSKFWKGLQTAMGTMLDFSTA 360

Query: 361 FHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATIGIAPYEALYG 420
           FHPQTDGQTER+NQVLEDMLRAC L+F  SWD +L+L+EFAYNNS+QATIG+AP+EALYG
Sbjct: 361 FHPQTDGQTERLNQVLEDMLRACALEFPSSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 420

Query: 421 KKCRSPINWDEVGERVLLGPDLV 440
           K CRSP+ W EVGE+ L+GP LV
Sbjct: 421 KCCRSPVCWGEVGEQRLMGPKLV 443

[Close]

BLAST of MC08g_new0294 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 652 bits (1683), Expect = 4.96e-224
Identity = 309/443 (69.75%), Postives = 373/443 (84.20%), Query Frame = 0


Query: 1   MQHGKVIAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYGERIQVFTDHQSLKYLF 60
           MQ GKV+AYASRQLK HE NYPTHDLELAAVVFAL + RHYLYGE+IQ+FTDH+SLKY F
Sbjct: 402 MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 461

Query: 61  TQKELNLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVAACSPMHSELKH 120
           TQKELN+RQRRWLELVKDYDCEI YHPGK NVVADALSRK +  AAL+   +P+H +L+ 
Sbjct: 462 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 521

Query: 121 LEVELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLA--KGFSMVGHG-DFTLSGEATL 180
            E+ ++V  ++  LA+++V+P+LRQRII AQ  DP L   +G +  G   +F+LS +  L
Sbjct: 522 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL 581

Query: 181 LFRRRLCVPKDYSLRNDLLGEAHNAPFSVHPGSTKMYQDLKKHYWCHNMKREIAQFVSKC 240
           LF RRLCVP D +++ +LL EAH++PFS+HPGSTKMYQDLK+ YW  NMKRE+A+FVSKC
Sbjct: 582 LFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSKC 641

Query: 241 LTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWVVVDRLTKSAH 300
           L CQQVKA RQ+PAGLLQPLSIP WKW++V+MDFI GLPRT++GFTVIWVVVDRLTKSAH
Sbjct: 642 LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLTKSAH 701

Query: 301 FIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKSLGTKLDFSTA 360
           F+PGK+TYT  KWA+LY+ EIVRLHG+PVS VSDRD  F   FW+ L  ++GT+LDFSTA
Sbjct: 702 FVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 761

Query: 361 FHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATIGIAPYEALYG 420
           FHPQTDGQTER+N+VLEDMLRAC L+F GSWD +L+L+EFAYNNS+QATIG+AP+EALY 
Sbjct: 762 FHPQTDGQTERLNKVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYD 821

Query: 421 KKCRSPINWDEVGERVLLGPDLV 440
           K CRSPI W EVGE+ L+GP+LV
Sbjct: 822 KCCRSPICWGEVGEQRLMGPELV 844

[Close]

BLAST of MC08g_new0294 vs. ExPASy TrEMBL
Match: A0A5A7VAA9 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold100G00010 PE=4 SV=1)

HSP 1 Score: 648 bits (1671), Expect = 3.63e-228
Identity = 306/443 (69.07%), Postives = 374/443 (84.42%), Query Frame = 0


Query: 1   MQHGKVIAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYGERIQVFTDHQSLKYLF 60
           MQ GKV+AYASRQLK HE NYPTHDLELAA+VFAL + RH+LYGE+IQ+FTDH+SLKY F
Sbjct: 141 MQQGKVVAYASRQLKSHEQNYPTHDLELAAMVFALKIWRHFLYGEKIQIFTDHKSLKYFF 200

Query: 61  TQKELNLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVAACSPMHSELKH 120
           TQKELN+RQRRWLELVKDYD EI YHPGK NVVADALSRK +  AAL+   +P+H +L+ 
Sbjct: 201 TQKELNMRQRRWLELVKDYDREILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 260

Query: 121 LEVELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLA--KGFSMVGHG-DFTLSGEATL 180
            E+ ++V  ++  LA+++V+P+LRQRII AQ  DP L   +G +  G   +F+LS +  L
Sbjct: 261 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL 320

Query: 181 LFRRRLCVPKDYSLRNDLLGEAHNAPFSVHPGSTKMYQDLKKHYWCHNMKREIAQFVSKC 240
           LF RRLCVP D +++ +LL EAH++PFS+HPGSTKMYQDLK+ YW  NMKRE+A+FVS+C
Sbjct: 321 LFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRC 380

Query: 241 LTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWVVVDRLTKSAH 300
           L CQQVKA RQ+PAGLLQPLSIP WKW++V+MDFITGLPRT++GFTVIWVVVDRLTKSAH
Sbjct: 381 LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 440

Query: 301 FIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKSLGTKLDFSTA 360
           F+PGK+TYT  KWA+LY+ EIVRLHG+PVS VSDRD  F   FW+ L  ++GT+LDFSTA
Sbjct: 441 FVPGKSTYTANKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 500

Query: 361 FHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATIGIAPYEALYG 420
           FHPQTDGQTER+NQVLE+MLRAC L+F GSWD +L+L+EFAYNNS+QATIG+AP+EALYG
Sbjct: 501 FHPQTDGQTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 560

Query: 421 KKCRSPINWDEVGERVLLGPDLV 440
           K CRSP+ W EVGE+ L+GP+LV
Sbjct: 561 KCCRSPVCWGEVGEQRLMGPELV 583

[Close]

BLAST of MC08g_new0294 vs. ExPASy TrEMBL
Match: A0A5A7VDP3 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1536G00010 PE=4 SV=1)

HSP 1 Score: 647 bits (1669), Expect = 7.29e-228
Identity = 307/443 (69.30%), Postives = 371/443 (83.75%), Query Frame = 0


Query: 1   MQHGKVIAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYGERIQVFTDHQSLKYLF 60
           MQ GKV+AYASRQLK HE NYPTHDLELAAVVFAL + RHYLYGE+IQ+FTDH+SLKY F
Sbjct: 1   MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60

Query: 61  TQKELNLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVAACSPMHSELKH 120
           TQKELN+RQRRWLELVKDYDCEI YHPGK NVVADALSRK +  AAL+   +P+H +L+ 
Sbjct: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITWQAPLHRDLER 120

Query: 121 LEVELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLA--KGFSMVGHG-DFTLSGEATL 180
            E+ ++V  ++  LA+++V+P+LRQRII AQ  DP L   +G +      +F+LS +  L
Sbjct: 121 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEARQTTEFSLSSDGGL 180

Query: 181 LFRRRLCVPKDYSLRNDLLGEAHNAPFSVHPGSTKMYQDLKKHYWCHNMKREIAQFVSKC 240
           LF  RLCVP D  ++ +LL EAH++PFS+HPGSTKMYQDLK+ YW  NMKRE+A+FVSKC
Sbjct: 181 LFEGRLCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKC 240

Query: 241 LTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWVVVDRLTKSAH 300
           L CQQVKA RQ+PAGLLQPLSIP WKW++V+MDFITGLPRT++GFTVIWVVVDRLTKSAH
Sbjct: 241 LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 300

Query: 301 FIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKSLGTKLDFSTA 360
           F+PGK+TYT  KWA+LY+ EIVRLHG+PVS VSDRD  F   FW+ L  ++GT+LDFSTA
Sbjct: 301 FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 360

Query: 361 FHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATIGIAPYEALYG 420
           FHPQTDGQTER+NQVLEDMLRAC L+F GSWD +L+L+EFAYNNS+QATIG+ P+EALYG
Sbjct: 361 FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMTPFEALYG 420

Query: 421 KKCRSPINWDEVGERVLLGPDLV 440
           + CRSP+ W EVGE+ L+GP+LV
Sbjct: 421 RCCRSPVCWGEVGEQRLMGPELV 443

[Close]

BLAST of MC08g_new0294 vs. ExPASy TrEMBL
Match: A0A5A7SZD6 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001250 PE=4 SV=1)

HSP 1 Score: 654 bits (1686), Expect = 1.05e-227
Identity = 309/443 (69.75%), Postives = 373/443 (84.20%), Query Frame = 0


Query: 1   MQHGKVIAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYGERIQVFTDHQSLKYLF 60
           MQ GKV+AYASRQLK HE NYPTHDLELAAVVFAL + RHYLYGE+IQ+FTDH+SLKY F
Sbjct: 191 MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 250

Query: 61  TQKELNLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVAACSPMHSELKH 120
           TQKELN+RQRRWLELVKDYDCEI YHPGK NVV DALSRK +  AAL+   +P+H +L+ 
Sbjct: 251 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSHSAALITRQAPLHRDLER 310

Query: 121 LEVELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLA--KGFSMVGH-GDFTLSGEATL 180
            E+ ++V  ++  LA+++V+P+LRQRII AQ  DP L   +G +  G   +F+LS +  L
Sbjct: 311 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGL 370

Query: 181 LFRRRLCVPKDYSLRNDLLGEAHNAPFSVHPGSTKMYQDLKKHYWCHNMKREIAQFVSKC 240
           LF  RLCVP D +++ +LL EAH++PFS+HPGSTKMYQDLK+ YW  NMKRE+A+FVSKC
Sbjct: 371 LFESRLCVPSDSAIKTELLTEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKC 430

Query: 241 LTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWVVVDRLTKSAH 300
           L CQQVKA RQ+PAGLLQPLSIP WKW++V+MDFITGLPRT++GFTVIWVVVDRLTKSAH
Sbjct: 431 LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 490

Query: 301 FIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKSLGTKLDFSTA 360
           F+PGK+TYT  KWA+LY+ EIVRLHG+PVS VSDRD  F   FW+ L  ++GT+LDFSTA
Sbjct: 491 FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 550

Query: 361 FHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATIGIAPYEALYG 420
           FHPQTDGQTER+NQVLEDMLRAC L+F GSWD +L+L+EFAYNNS+QATIG+AP+EALYG
Sbjct: 551 FHPQTDGQTERLNQVLEDMLRACALEFPGSWDAHLHLMEFAYNNSYQATIGMAPFEALYG 610

Query: 421 KKCRSPINWDEVGERVLLGPDLV 440
           K CRSP+ W EVGE+ L+GP+LV
Sbjct: 611 KCCRSPVCWGEVGEQRLMGPELV 633

[Close]

BLAST of MC08g_new0294 vs. ExPASy TrEMBL
Match: A0A5A7VL20 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00740 PE=4 SV=1)

HSP 1 Score: 644 bits (1662), Expect = 8.43e-227
Identity = 305/443 (68.85%), Postives = 370/443 (83.52%), Query Frame = 0


Query: 1   MQHGKVIAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYGERIQVFTDHQSLKYLF 60
           MQ GKV+AYASRQLK HE NYPTHDLELAAVVFAL + RHYLYGE+IQ+FTDH+SLKY F
Sbjct: 1   MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60

Query: 61  TQKELNLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVAACSPMHSELKH 120
           TQKELN+RQRRWLELVKDYDCEI YHPGK NVVADAL+RK +  AAL+   +P+H +L+ 
Sbjct: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALNRKVSHSAALITRQAPLHRDLER 120

Query: 121 LEVELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLA--KGFSMVGHG-DFTLSGEATL 180
            E+ ++V  ++  LA+++V+P+LRQRII AQ  DP L   +G +  G   +F+LS +  L
Sbjct: 121 AEIAVSVGAVTKQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL 180

Query: 181 LFRRRLCVPKDYSLRNDLLGEAHNAPFSVHPGSTKMYQDLKKHYWCHNMKREIAQFVSKC 240
           LF RRLCVP D +++ +LL EAH++PFS+HPGSTKMYQDLK+ YW  NMKRE+A+FVS+C
Sbjct: 181 LFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRC 240

Query: 241 LTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWVVVDRLTKSAH 300
           L CQQVKA RQ+PAGLLQ LSI  WKW++V+MDFITGLPRT++GFTVIWVVVDRLTKSAH
Sbjct: 241 LVCQQVKAPRQKPAGLLQHLSITEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 300

Query: 301 FIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKSLGTKLDFSTA 360
           F+PGK+TYT  KWA+LY+ EIVRLHG+PVS +SDRD  F   FW+ L  ++GT LDFSTA
Sbjct: 301 FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIISDRDARFTSKFWKGLQTAMGTMLDFSTA 360

Query: 361 FHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATIGIAPYEALYG 420
           FHPQTDGQTER+NQVLEDMLRAC L+F  SWD +L+L+EFAYNNS+QATIG+AP+EALYG
Sbjct: 361 FHPQTDGQTERLNQVLEDMLRACALEFPSSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 420

Query: 421 KKCRSPINWDEVGERVLLGPDLV 440
           K CRSP+ W EVGE+ L+GP LV
Sbjct: 421 KCCRSPVCWGEVGEQRLMGPKLV 443

[Close]

BLAST of MC08g_new0294 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 652 bits (1683), Expect = 2.40e-224
Identity = 309/443 (69.75%), Postives = 373/443 (84.20%), Query Frame = 0


Query: 1   MQHGKVIAYASRQLKVHELNYPTHDLELAAVVFALMLSRHYLYGERIQVFTDHQSLKYLF 60
           MQ GKV+AYASRQLK HE NYPTHDLELAAVVFAL + RHYLYGE+IQ+FTDH+SLKY F
Sbjct: 402 MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 461

Query: 61  TQKELNLRQRRWLELVKDYDCEISYHPGKVNVVADALSRKAASVAALVAACSPMHSELKH 120
           TQKELN+RQRRWLELVKDYDCEI YHPGK NVVADALSRK +  AAL+   +P+H +L+ 
Sbjct: 462 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 521

Query: 121 LEVELTVDDISALLARVSVEPSLRQRIIVAQKGDPSLA--KGFSMVGHG-DFTLSGEATL 180
            E+ ++V  ++  LA+++V+P+LRQRII AQ  DP L   +G +  G   +F+LS +  L
Sbjct: 522 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL 581

Query: 181 LFRRRLCVPKDYSLRNDLLGEAHNAPFSVHPGSTKMYQDLKKHYWCHNMKREIAQFVSKC 240
           LF RRLCVP D +++ +LL EAH++PFS+HPGSTKMYQDLK+ YW  NMKRE+A+FVSKC
Sbjct: 582 LFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEFVSKC 641

Query: 241 LTCQQVKASRQRPAGLLQPLSIPVWKWDDVAMDFITGLPRTVKGFTVIWVVVDRLTKSAH 300
           L CQQVKA RQ+PAGLLQPLSIP WKW++V+MDFI GLPRT++GFTVIWVVVDRLTKSAH
Sbjct: 642 LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLTKSAH 701

Query: 301 FIPGKATYTVEKWAELYLQEIVRLHGIPVSTVSDRDPHFILTFWRSLHKSLGTKLDFSTA 360
           F+PGK+TYT  KWA+LY+ EIVRLHG+PVS VSDRD  F   FW+ L  ++GT+LDFSTA
Sbjct: 702 FVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 761

Query: 361 FHPQTDGQTERVNQVLEDMLRACMLDFGGSWDKYLYLIEFAYNNSFQATIGIAPYEALYG 420
           FHPQTDGQTER+N+VLEDMLRAC L+F GSWD +L+L+EFAYNNS+QATIG+AP+EALY 
Sbjct: 762 FHPQTDGQTERLNKVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYD 821

Query: 421 KKCRSPINWDEVGERVLLGPDLV 440
           K CRSPI W EVGE+ L+GP+LV
Sbjct: 822 KCCRSPICWGEVGEQRLMGPELV 844

The following BLAST results are available for this feature:

BLAST of MC08g_new0294 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7LHG5	4.0e-54	32.16	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	5.2e-54	32.16	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	3.9e-49	26.90	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	3.9e-49	26.90	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.9e-49	26.90	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of MC08g_new0294 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062835.1	7.49e-228	69.07	pol protein [Cucumis melo var. makuwa]	[more]
KAA0064005.1	1.51e-227	69.30	pol protein [Cucumis melo var. makuwa]	[more]
KAA0035938.1	2.17e-227	69.75	pol protein [Cucumis melo var. makuwa]	[more]
KAA0068114.1	1.74e-226	68.85	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	4.96e-224	69.75	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of MC08g_new0294 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VAA9	3.63e-228	69.07	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold100G00010 PE...	[more]
A0A5A7VDP3	7.29e-228	69.30	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1536G00010 P...	[more]
A0A5A7SZD6	1.05e-227	69.75	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001250 PE...	[more]
A0A5A7VL20	8.43e-227	68.85	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00740 PE...	[more]
A0A5A7UP94	2.40e-224	69.75	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]

BLAST of MC08g_new0294 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 5..79 e-value: 3.6E-23 score: 81.9
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 190..245 e-value: 6.4E-16 score: 58.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 254..432 e-value: 3.9E-44 score: 152.3
None	No IPR available	GENE3D	1.10.340.70		coord: 164..244 e-value: 2.5E-17 score: 64.9
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 5..151 coord: 182..410
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 2..100 e-value: 1.82274E-45 score: 151.876
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 252..419 score: 18.967123
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..85
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 257..415

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g_new0294.1	MC08g_new0294.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding