MC08g_new0287 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g_new0287
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 15303384 .. 15305093 (+)
RNA-Seq ExpressionMC08g_new0287
SyntenyMC08g_new0287
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGGCTGTAGTGATGGGAGGACATGTGCCCGCCGCTGTTTCACGGGCGATCACGTCCTTAGTGTGGTTTTTGAAGCGGCAGGATCGGCAGCCCCGATCTTCAAGACCGTTGGGATCCGAAACGGCACTCAGAGATCTTTTTAAATCCATCTTCACGGTGCACGGTATGTTTTAAATTTTTATGCTTTATTTTTCGGCTGTGATGGCCTTCTAAGTTTCCGGTTTTCCTTGGAAGTATTCCCTGGTGGGACCCCTCCTGTCGCCTCCCGGAAGAATAGCGTTATGAAGAAAATCCTTGCAATTCCTTGGGCACAACGAGTCCCCACTCTTATTATAACAAATGGGAAGTTAACCGAACACCGCCTGGTCGGAGATCCCGATGGCCCAACCAGAGGCAACGATGAGCGTCCTACCCCTAGAGTGGTTCTAATAGGTAGGACGTTTATTTTTCCCCTTCCAATGTTCAGCTACCATTGCTCACCATTTTTTTTGCAGATCATATGAAGTCGCCAGCCATCTCACCCACAAGATGTGAACTTGTATTTCGACCTCTCCTTCCGATTGGTAAAGTTTCTCCGAGCGACATGGCCAGCGTCGGAAGTGCTGCCTCAACCAATTTTGTGGCTCTCGTCTCTCCGGACCCGTCTACCAGGGTTGATGGGGGGAGTCTTTCAGTACAGATAGTTCCTCGGCCTGCGGACCAGATTCCACAAAGTTCGCACGACGTTGAGATAGATACCAGCGAACAACCCTTATCACACGACGACTTGCCGAGCAGCTGACAAGCTTGCCAGCCCCTTGGCCCTTTGCAGAGTGGGGGATCTACTTGATCGGTCCATTGCCTATGGGAAAAAACCAGACAAAATTCGTAATCGTCGTAGTCGATTACTTCATCAAGTGGGTCGAGGCTGAACCGCTGGCCACAATCACCGAGCGAAATATAACAACTTTCTTATAGACGTTCATCATCTATCGATTCGGTATCCCAAATACCATCATCCTTGATAATGGAAAATAATTCGACAACCAAAACTTAAAGAAGTTCTGTAAGGATATAGGCATCAAGCACCTCAACTCGACCCCCGTGCACTTTTAGACCAACAGGCAGGTCAAGGCTGTGAACACGATCATCAAAAGAATCTTGAAAGCCAGGCTCGAGAAACTTAAAGGCTAGTGGGCAGAAGAACTTCCAGGCGTCATAAGGGCTTACAGGACTACTCCTAGGACTTCGATGAACTAAACCCCCTATTCATTGTCCTTCGGGATAAAGGTCGTAGTACCCGTGGAAATGGAAGTCTCTCCACTAAGAATCCAAGCCTTTTATAAGGGCCTGAACAAGGAAGGAATTCTGAACTCCTTGGATCTCGTTGAACAGCATAGGGAAACCGCTCGCCAGCAAGTAGCCCAACACCAGAGCCGAGTGGCTAGGTACCACAACTCACTAGTAAAGCCAAGAAGATTCACAGTCGGAGCATTGGTGTTGAGAAAGGTGATGCCAAACAAGAAGGAACACTCAGATAGAGCACTCAACCGGAACTGGGAAGGACCATATCGCGTAACGGGCGTCATGCGACGAGGAACCTACACTCTATAAGACCTATACGGCAAGCCCTTTCACCACCCATGGAATTCCGAGCACTTACACGTGTATTATCCGTCAGACAAACAGTGGGCGACCATTGTAGAGGTGACTCCTCTTGTTATTGAATAA

mRNA sequence

ACGGCTGTAGTGATGGGAGGACATGTGCCCGCCGCTGTTTCACGGGCGATCACGTCCTTAGTGTGGTTTTTGAAGCGGCAGGATCGGCAGCCCCGATCTTCAAGACCGTTGGGATCCGAAACGGCACTCAGAGATCTTTTTAAATCCATCTTCACGGTGCACGTATTCCCTGGTGGGACCCCTCCTGTCGCCTCCCGGAAGAATAGCGTTATGAAGAAAATCCTTGCAATTCCTTGGGCACAACGAGTCCCCACTCTTATTATAACAAATGGGAAGTTAACCGAACACCGCCTGGTCGGAGATCCCGATGGCCCAACCAGAGGCAACGATGAGCGTCCTACCCCTAGAGTGGTTCTAATAGACAAACAGTGGGCGACCATTGTAGAGGTGACTCCTCTTGTTATTGAATAA

Coding sequence (CDS)

ACGGCTGTAGTGATGGGAGGACATGTGCCCGCCGCTGTTTCACGGGCGATCACGTCCTTAGTGTGGTTTTTGAAGCGGCAGGATCGGCAGCCCCGATCTTCAAGACCGTTGGGATCCGAAACGGCACTCAGAGATCTTTTTAAATCCATCTTCACGGTGCACGTATTCCCTGGTGGGACCCCTCCTGTCGCCTCCCGGAAGAATAGCGTTATGAAGAAAATCCTTGCAATTCCTTGGGCACAACGAGTCCCCACTCTTATTATAACAAATGGGAAGTTAACCGAACACCGCCTGGTCGGAGATCCCGATGGCCCAACCAGAGGCAACGATGAGCGTCCTACCCCTAGAGTGGTTCTAATAGACAAACAGTGGGCGACCATTGTAGAGGTGACTCCTCTTGTTATTGAATAA

Protein sequence

TAVVMGGHVPAAVSRAITSLVWFLKRQDRQPRSSRPLGSETALRDLFKSIFTVHVFPGGTPPVASRKNSVMKKILAIPWAQRVPTLIITNGKLTEHRLVGDPDGPTRGNDERPTPRVVLIDKQWATIVEVTPLVIE
Homology
[Close]
BLAST of MC08g_new0287 vs. NCBI nr
Match: XP_022141992.1 (uncharacterized protein LOC111012228 [Momordica charantia])

HSP 1 Score: 88.6 bits (218), Expect = 5.24e-19
Identity = 45/88 (51.14%), Postives = 59/88 (67.05%), Query Frame = 0 

Query: 35  RPLGSETALRDLFKSIFTVHVFPGGTPPVASRKNSVMKKILAIPWAQRVPTLIITNGKLT 94
           R L S+ ++     S F  ++FPGG P V SR  +V+KKILAIP  +RVPTL+IT+ +L 
Sbjct: 66  RRLVSDGSVVGCVASCFRDNIFPGGAPLVVSRSENVLKKILAIPMIERVPTLLITDDRLA 125

Query: 95  EHRLVGDPDGPTRGNDERPTPRVVLIDK 122
            HRLV D +GPTRGND+R TP    + K
Sbjct: 126 NHRLVRDHNGPTRGNDKRLTPLEASVGK 153

[Close]
BLAST of MC08g_new0287 vs. ExPASy TrEMBL
Match: A0A6J1CLC8 (uncharacterized protein LOC111012228 OS=Momordica charantia OX=3673 GN=LOC111012228 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.54e-19
Identity = 45/88 (51.14%), Postives = 59/88 (67.05%), Query Frame = 0 

Query: 35  RPLGSETALRDLFKSIFTVHVFPGGTPPVASRKNSVMKKILAIPWAQRVPTLIITNGKLT 94
           R L S+ ++     S F  ++FPGG P V SR  +V+KKILAIP  +RVPTL+IT+ +L 
Sbjct: 66  RRLVSDGSVVGCVASCFRDNIFPGGAPLVVSRSENVLKKILAIPMIERVPTLLITDDRLA 125

Query: 95  EHRLVGDPDGPTRGNDERPTPRVVLIDK 122
            HRLV D +GPTRGND+R TP    + K
Sbjct: 126 NHRLVRDHNGPTRGNDKRLTPLEASVGK 153

The following BLAST results are available for this feature:
BLAST of MC08g_new0287 vs.
Match NameE-valueIdentityDescription
BLAST of MC08g_new0287 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022141992.15.24e-1951.14uncharacterized protein LOC111012228 [Momordica charantia][more]
BLAST of MC08g_new0287 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CLC82.54e-1951.14uncharacterized protein LOC111012228 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
BLAST of MC08g_new0287 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g_new0287.1MC08g_new0287.1mRNA