MC08g_new0059 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g_new0059
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribosomal_S7 domain-containing protein
Location	MC08: 3515742 .. 3517980 (-)
RNA-Seq Expression	MC08g_new0059
Synteny	MC08g_new0059

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCGTTCTCCGGTTCGCAACGGCTGGGGGATGATGACCTTCCTCCATCTTATCAGTTAAATCAAAACCCCACTCGCGGTTGGTTTTTATTGGGGGAAACACACAGTGCATCGAGATCTTTCACGATGAGAAAACAAAAAAAGATACAGAAAAGAGGGGAAATCCGGTACTATGCTCACACTGAAACTGTGTAATATCAAAATGGTCTTTTGGGGGAAGGTGGCGTACGTGTCAGGTGATGATTGGGTGGCGAAGATCTCAGGAGGGTACGTGTAGGAGTACGGAGGAGTGTGACTGTAATGAATCGCGACCGTAGAATGGAGTATTAAAGAGAGGGGGAATCCTGGCCGTGGGATCGTTGATGGCGAGGGTGGGGCCACCAGATGTTGCTCGTCGCGTTGGAAAATGGGCATGATTGGAATGCGTCGTCACCCAACCAACCTTCTATATTTTATTTTTATTTTTTGCAAAGGAATAGGTTATGGTTATGGTTATGTTATTATTGTTATGTCATGTGTGCCCCAGGTTTTCTTAAATGTACTCAAATTTTGTATTTTAGCCCATCAAAATCAAAATATAATTAATTCTTTAAATATTTATTAGAAAAGCAACATAACTCTCTTTTTTCTTAAAACAAGTTCTGAAATCAAAATTTTATAACATGATCCTTTTTCGACCTGAGCCATTTACGTAAATAAATTAAAGAAAAGAAGTATATATTTCGTAACATAGCATAAAGTTTAAAAATTTTTATAAGAATAAAATCATCCAAATTAGACACATGATGCTGTAAGTTTGTTTGATTATATTTTCTGATTTTTTTATTATTAAAAAGTATAAAATTTATGTATTTGAAAAAAAAATGAAAAGTCGTGTCTTTCGTTTAAAAATATACCTAATAAATTGTAAATCTAACCTAGCTTAATCGATTAAGGCGTTGTATTATCAACAAAAATATCGAGGACGTTCAAATTCAACCTCCATGTATTGTTCGACTGAAAAAATACCTACGAAATTCATGGTAGGATGAAAATATGGTTCTTTTTTTATAAAATAATGCAAATAGAGTTTTTTCTTTTTTTTTTTATTTTAAACAAGCCTATCACGTCATTAGTTCAAAAAGTATATAAGAAACATATATTTCAGAGAGATGAAGGCAATGTGGTAATAAAAAAAAATGTTGATTTGAACTACTAAAAGGAAGCAGCGATTTTGATATCGTCGGAACTATTTTGAAAATAGAGTTAAAAATTCAATCAACTAAAAATCTAGAAGTTAAATTAATATAATTTGTATGGTTTTGACATTCTTGATCATATATTTAATTGTGATCGTTTTAGGTTTATTTTTTGTCTTTTTAAGAAAGGTAGAATTTTTTAGTACAAGTACACTATAAATAATTTCCAATTAAGTCTATAAAATGTAGATTTTTTTTCCGTCATAGAAAGTAAATTCTTATACGAACAATTAAGCTCAAATGTTACTTATATATTTTACTTATCCCACCATATAGATTTTTTCTGAAAAGAGATACCTCACCACCAATTCAAACAGTAAAATTACTTCTTAAGATACCAAAAAATTTTTGAAACCCTGAATTCAAAAATCAAATACAAATCATATAAATCAAGATTGTGAAGCTCATTTCCCAACATAATTCAAACATAAACTATACATTTTTAGATTTTATAAATCACAATTTAACACATTTACTTTTACTCTAACAAAATTTTTATTTAAATTTCTGAAATTTGTAAATTAAAGACCTCTTATATAATTGAGTGAATTCAATCGGTTGAAATTTTATCTATGGTTTAAATCCTAAAAGTAGATAAAATAATAATAAACTCAACTTATTATAGCATAGACCATAAATACATATAGATCATCAATTAGATAAAATATTAAAGGTCTTTTTTTTAATTCAGCGAATGGGATGGTGGGAATTAAATTTCAATATTATATAAGGTATAGGTACTATAAATCTGCTAACATAAGCATAACTCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCCAGTCACTAGTCCTGCCTTCGGCATCCCCCTCCTTGCGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACGGGTGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCGTATGGCTGACCGGCGATTACTAGCGATTCCGGCTTCATGCAGGCGAGTTGCAGCCTACAATCCGAACTGA

mRNA sequence

ATGGATCCGTTCTCCGGTTCGCAACGGCTGGGGGATGATGACCTTCCTCCATCTTATCAGTTAAATCAAAACCCCACTCGCGTACGGCTACCTTGTTACGACTTCACTCCAGTCACTAGTCCTGCCTTCGGCATCCCCCTCCTTGCGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACGGGTGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCGTATGGCTGACCGGCGATTACTAGCGATTCCGGCTTCATGCAGGCGAGTTGCAGCCTACAATCCGAACTGA

Coding sequence (CDS)

ATGGATCCGTTCTCCGGTTCGCAACGGCTGGGGGATGATGACCTTCCTCCATCTTATCAGTTAAATCAAAACCCCACTCGCGTACGGCTACCTTGTTACGACTTCACTCCAGTCACTAGTCCTGCCTTCGGCATCCCCCTCCTTGCGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACGGGTGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCGTATGGCTGACCGGCGATTACTAGCGATTCCGGCTTCATGCAGGCGAGTTGCAGCCTACAATCCGAACTGA

Protein sequence

MDPFSGSQRLGDDDLPPSYQLNQNPTRVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAAYNPN

Homology

[Close]

BLAST of MC08g_new0059 vs. NCBI nr
Match: KYP48942.1 (hypothetical protein KK1_029343, partial [Cajanus cajan])

HSP 1 Score: 145 bits (366), Expect = 4.64e-43
Identity = 74/83 (89.16%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 17 PSYQLNQNPTRVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR 76
          P  ++ Q    VRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR
Sbjct: 8  PEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR 67

Query: 77 RMADRRLLAIPASCRRVAAYNPN 99
          RMADRRLLAIPASCRRVAAYNPN
Sbjct: 68 RMADRRLLAIPASCRRVAAYNPN 90

[Close]

BLAST of MC08g_new0059 vs. NCBI nr
Match: OWM63425.1 (hypothetical protein CDL15_Pgr022170 [Punica granatum] >OWM76771.1 hypothetical protein CDL15_Pgr004983 [Punica granatum])

HSP 1 Score: 142 bits (357), Expect = 1.27e-41
Identity = 73/83 (87.95%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 17 PSYQLNQNPTRVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR 76
          P  ++ Q    VRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR
Sbjct: 13 PEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR 72

Query: 77 RMADRRLLAIPASCRRVAAYNPN 99
          RMADRRLLAIPASCRRVAA NPN
Sbjct: 73 RMADRRLLAIPASCRRVAACNPN 95

[Close]

BLAST of MC08g_new0059 vs. NCBI nr
Match: CAF1728903.1 (unnamed protein product [Brassica napus] >VDD65840.1 unnamed protein product [Brassica oleracea] >CAF1751061.1 unnamed protein product [Brassica napus] >CAF1831100.1 unnamed protein product [Brassica napus] >CDY19670.1 BnaC09g29260D [Brassica napus])

HSP 1 Score: 140 bits (352), Expect = 9.08e-41
Identity = 72/83 (86.75%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 17  PSYQLNQNPTRVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR 76
           P  ++ Q    VRLPCYDFTPVTSPAFG PLLAVKVTTSGMASSHSVTGGVYKARERIHR
Sbjct: 20  PEKEVIQPHLPVRLPCYDFTPVTSPAFGTPLLAVKVTTSGMASSHSVTGGVYKARERIHR 79

Query: 77  RMADRRLLAIPASCRRVAAYNPN 99
           RMADRRLLAIPASCRRVAA NPN
Sbjct: 80  RMADRRLLAIPASCRRVAACNPN 102

[Close]

BLAST of MC08g_new0059 vs. NCBI nr
Match: KAG2241182.1 (hypothetical protein Bca52824_096832 [Brassica carinata] >KAG2275617.1 hypothetical protein Bca52824_058172 [Brassica carinata] >KAG2275694.1 hypothetical protein Bca52824_058249 [Brassica carinata] >CAA7013178.1 unnamed protein product [Microthlaspi erraticum] >CAA7057850.1 unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 140 bits (352), Expect = 9.08e-41
Identity = 72/83 (86.75%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 17  PSYQLNQNPTRVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR 76
           P  ++ Q    VRLPCYDFTPVTSPAFG PLLAVKVTTSGMASSHSVTGGVYKARERIHR
Sbjct: 20  PEKEVIQPHLPVRLPCYDFTPVTSPAFGTPLLAVKVTTSGMASSHSVTGGVYKARERIHR 79

Query: 77  RMADRRLLAIPASCRRVAAYNPN 99
           RMADRRLLAIPASCRRVAA NPN
Sbjct: 80  RMADRRLLAIPASCRRVAACNPN 102

[Close]

BLAST of MC08g_new0059 vs. NCBI nr
Match: YP_001152206.1 (ORF137 [Pinus koraiensis] >ABP35449.1 ORF137 [Pinus koraiensis])

HSP 1 Score: 139 bits (350), Expect = 5.32e-40
Identity = 72/83 (86.75%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 17  PSYQLNQNPTRVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR 76
           P  ++ Q    VRLPCYDFTPVTSPAFGIPLLAVKVTT GMASSHSVTGGVYKARERIHR
Sbjct: 55  PEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTWGMASSHSVTGGVYKARERIHR 114

Query: 77  RMADRRLLAIPASCRRVAAYNPN 99
           RMADRRLLAIPASCRRVAA NPN
Sbjct: 115 RMADRRLLAIPASCRRVAACNPN 137

[Close]

BLAST of MC08g_new0059 vs. ExPASy TrEMBL
Match: A0A151S2B1 (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_029343 PE=4 SV=1)

HSP 1 Score: 145 bits (366), Expect = 2.25e-43
Identity = 74/83 (89.16%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 17 PSYQLNQNPTRVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR 76
          P  ++ Q    VRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR
Sbjct: 8  PEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR 67

Query: 77 RMADRRLLAIPASCRRVAAYNPN 99
          RMADRRLLAIPASCRRVAAYNPN
Sbjct: 68 RMADRRLLAIPASCRRVAAYNPN 90

[Close]

BLAST of MC08g_new0059 vs. ExPASy TrEMBL
Match: A0A218VSE2 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr004983 PE=4 SV=1)

HSP 1 Score: 142 bits (357), Expect = 6.16e-42
Identity = 73/83 (87.95%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 17 PSYQLNQNPTRVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR 76
          P  ++ Q    VRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR
Sbjct: 13 PEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR 72

Query: 77 RMADRRLLAIPASCRRVAAYNPN 99
          RMADRRLLAIPASCRRVAA NPN
Sbjct: 73 RMADRRLLAIPASCRRVAACNPN 95

[Close]

BLAST of MC08g_new0059 vs. ExPASy TrEMBL
Match: A0A078E1E5 (BnaC09g29260D protein OS=Brassica napus OX=3708 GN=BnaC09g29260D PE=4 SV=1)

HSP 1 Score: 140 bits (352), Expect = 4.40e-41
Identity = 72/83 (86.75%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 17  PSYQLNQNPTRVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR 76
           P  ++ Q    VRLPCYDFTPVTSPAFG PLLAVKVTTSGMASSHSVTGGVYKARERIHR
Sbjct: 20  PEKEVIQPHLPVRLPCYDFTPVTSPAFGTPLLAVKVTTSGMASSHSVTGGVYKARERIHR 79

Query: 77  RMADRRLLAIPASCRRVAAYNPN 99
           RMADRRLLAIPASCRRVAA NPN
Sbjct: 80  RMADRRLLAIPASCRRVAACNPN 102

[Close]

BLAST of MC08g_new0059 vs. ExPASy TrEMBL
Match: A0A6D2HHK8 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS412 PE=4 SV=1)

HSP 1 Score: 140 bits (352), Expect = 4.40e-41
Identity = 72/83 (86.75%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 17  PSYQLNQNPTRVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR 76
           P  ++ Q    VRLPCYDFTPVTSPAFG PLLAVKVTTSGMASSHSVTGGVYKARERIHR
Sbjct: 20  PEKEVIQPHLPVRLPCYDFTPVTSPAFGTPLLAVKVTTSGMASSHSVTGGVYKARERIHR 79

Query: 77  RMADRRLLAIPASCRRVAAYNPN 99
           RMADRRLLAIPASCRRVAA NPN
Sbjct: 80  RMADRRLLAIPASCRRVAACNPN 102

[Close]

BLAST of MC08g_new0059 vs. ExPASy TrEMBL
Match: A0A3P6GJR6 (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLSC47T61068H PE=4 SV=1)

HSP 1 Score: 140 bits (352), Expect = 4.40e-41
Identity = 72/83 (86.75%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 17  PSYQLNQNPTRVRLPCYDFTPVTSPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHR 76
           P  ++ Q    VRLPCYDFTPVTSPAFG PLLAVKVTTSGMASSHSVTGGVYKARERIHR
Sbjct: 20  PEKEVIQPHLPVRLPCYDFTPVTSPAFGTPLLAVKVTTSGMASSHSVTGGVYKARERIHR 79

Query: 77  RMADRRLLAIPASCRRVAAYNPN 99
           RMADRRLLAIPASCRRVAA NPN
Sbjct: 80  RMADRRLLAIPASCRRVAACNPN 102

The following BLAST results are available for this feature:

BLAST of MC08g_new0059 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g_new0059 vs. NCBI nr


Match Name	E-value	Identity	Description
KYP48942.1	4.64e-43	89.16	hypothetical protein KK1_029343, partial [Cajanus cajan]	[more]
OWM63425.1	1.27e-41	87.95	hypothetical protein CDL15_Pgr022170 [Punica granatum] >OWM76771.1 hypothetical ...	[more]
CAF1728903.1	9.08e-41	86.75	unnamed protein product [Brassica napus] >VDD65840.1 unnamed protein product [Br...	[more]
KAG2241182.1	9.08e-41	86.75	hypothetical protein Bca52824_096832 [Brassica carinata] >KAG2275617.1 hypotheti...	[more]
YP_001152206.1	5.32e-40	86.75	ORF137 [Pinus koraiensis] >ABP35449.1 ORF137 [Pinus koraiensis]	[more]

BLAST of MC08g_new0059 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A151S2B1	2.25e-43	89.16	Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_029343 PE=4 S...	[more]
A0A218VSE2	6.16e-42	87.95	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr004983 PE=4 SV=1	[more]
A0A078E1E5	4.40e-41	86.75	BnaC09g29260D protein OS=Brassica napus OX=3708 GN=BnaC09g29260D PE=4 SV=1	[more]
A0A6D2HHK8	4.40e-41	86.75	Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS412 PE...	[more]
A0A3P6GJR6	4.40e-41	86.75	Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLSC47T61068H PE=4 SV=1	[more]

BLAST of MC08g_new0059 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR38146	FAMILY NOT NAMED	coord: 22..99
None	No IPR available	PANTHER	PTHR38146:SF11	BNAC09G29260D PROTEIN	coord: 22..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g_new0059.1	MC08g_new0059.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast