MC08g2260 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g2260
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationMC08: 31412336 .. 31413554 (+)
RNA-Seq ExpressionMC08g2260
SyntenyMC08g2260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCATATAGACACAAGCCTCTTCTTATCCATTTGTGGAAGAGAAAATCTCCTCCATTTGGGCTCCTCCCTCCATGCCTCCATCATCAAGAGCTTCCAGCTCGCCAACCATGAAAATGGGGTCGTCATTGCGAATTCTCTCATCTCCATGTACCAGAGGTGCGGTAAATTGGCCGATGCAGTCAAGGTGTTTGATGAAATGTCTAGGAGAGATACTGTATCATGGAACGCATTGATCGCTGGGTTTATGAGAAATGGGGAGTCTTGTGTTGGTTTTAGCTACTTTAAAGCCATGTGTTTAGTTGGTGATTGTGAATTTGACAAAGCAACTTTGACGACGATTTTATCTGCTTGTGATGGCTTTGAGCTCTGTTATGTAATCAAAATGATTCACGGTTTGGCGTTTCTGAGTGGTTTTGTGCAAGAAATTACTGTGGGAAATGCTCTGATTAGTTCGTATTTTAAATGTGGATGTGTTGGTTTTGGGAGGCAAGTTTTTGATGAGATGGAGGAGAGAAATGTCATTACTTGGACAGCAGTGATCTCTGGCCTGGCTCATAATGGGCACCATGAGCACAGCCTGAAGCTTTTTAAGGAGATGATGAGTTGCGGCTCTGTGGAGCCAAATTCTTTAACTTATTTGAGTTTACTTACTGCTTGTTCTGGTTTGGAGGCACTAGAGGAAGGGCGTCAAATTCATGGTCTTATTTTGAAGTTGGGAATTCAGTCAGATTTGTGCATTGAGAGTGCTCTGATGGATATGTACTCGAAATCTGGAAGCATTGGATATGCTTGGAAGATTTTTGAGTCGGCTGAGGAACTTGATATGGTTTCATTGACTGTTATACTTGCAGGGTTCACTCAGAATGGGTGTGAGGATGAAGCCATTAGGATCTTTCTGAAAATGTTGAAGGTGGGGATCTTGATCGATGAGAATGTTGTTTCGGCCGCTCTTGGGGTGTTTGGTGCTGATACATCTTTGAGGCTGGGTCAGCAAGTTCACTCATTTGTTGTCAAAAGGAACTTTAGCTGCAATCCTTTTGTTGGCAATGGGCTTATAAACATGTACTCCAAGTGTGGAGCATTGGACGAGTCGGTCAAGGTCTTCGATAGGATGCGAGAAAGGAACTCGGTCACGTGGAACTCCATGATTGCAGCGTTTGCCCGGCATGGAGATGGCTCGAAAGCTCTATGTCTTTACGAGAATATGAAACTGGAAG

mRNA sequence

AATCATATAGACACAAGCCTCTTCTTATCCATTTGTGGAAGAGAAAATCTCCTCCATTTGGGCTCCTCCCTCCATGCCTCCATCATCAAGAGCTTCCAGCTCGCCAACCATGAAAATGGGGTCGTCATTGCGAATTCTCTCATCTCCATGTACCAGAGGTGCGGTAAATTGGCCGATGCAGTCAAGGTGTTTGATGAAATGTCTAGGAGAGATACTGTATCATGGAACGCATTGATCGCTGGGTTTATGAGAAATGGGGAGTCTTGTGTTGGTTTTAGCTACTTTAAAGCCATTGGTTTTGTGCAAGAAATTACTGTGGGAAATGCTCTGATTAGTTCGTATTTTAAATGTGGATGTGTTGGTTTTGGGAGGCAAGTTTTTGATGAGATGGAGGAGAGAAATGTCATTACTTGGACAGCAGTGATCTCTGGCCTGGCTCATAATGGGCACCATGAGCACAGCCTGAAGCTTTTTAAGGAGATGATGAGTTGCGGCTCTGTGGAGCCAAATTCTTTAACTTATTTGAGTTTACTTACTGCTTGTTCTGGTTTGGAGGCACTAGAGGAAGGGCGTCAAATTCATGGTCTTATTTTGAAGTTGGGAATTCAGTCAGATTTGTGCATTGAGAGTGCTCTGATGGATATGTACTCGAAATCTGGAAGCATTGGATATGCTTGGAAGATTTTTGAGTCGGCTGAGGAACTTGATATGGTTTCATTGACTGTTATACTTGCAGGGTTCACTCAGAATGGGTGTGAGGATGAAGCCATTAGGATCTTTCTGAAAATGTTGAAGGTGGGGATCTTGATCGATGAGAATGTTGTTTCGGCCGCTCTTGGGGTGTTTGGTGCTGATACATCTTTGAGGCTGGGTCAGCAAGTTCACTCATTTGTTGTCAAAAGGAACTTTAGCTGCAATCCTTTTGTTGGCAATGGGCTTATAAACATGTACTCCAAGTGTGGAGCATTGGACGAGTCGGTCAAGGTCTTCGATAGGATGCGAGAAAGGAACTCGGTCACGTGGAACTCCATGATTGCAGCGTTTGCCCGGCATGGAGATGGCTCGAAAGCTCTATGTCTTTACGAGAATATGAAACTGGAAG

Coding sequence (CDS)

AATCATATAGACACAAGCCTCTTCTTATCCATTTGTGGAAGAGAAAATCTCCTCCATTTGGGCTCCTCCCTCCATGCCTCCATCATCAAGAGCTTCCAGCTCGCCAACCATGAAAATGGGGTCGTCATTGCGAATTCTCTCATCTCCATGTACCAGAGGTGCGGTAAATTGGCCGATGCAGTCAAGGTGTTTGATGAAATGTCTAGGAGAGATACTGTATCATGGAACGCATTGATCGCTGGGTTTATGAGAAATGGGGAGTCTTGTGTTGGTTTTAGCTACTTTAAAGCCATTGGTTTTGTGCAAGAAATTACTGTGGGAAATGCTCTGATTAGTTCGTATTTTAAATGTGGATGTGTTGGTTTTGGGAGGCAAGTTTTTGATGAGATGGAGGAGAGAAATGTCATTACTTGGACAGCAGTGATCTCTGGCCTGGCTCATAATGGGCACCATGAGCACAGCCTGAAGCTTTTTAAGGAGATGATGAGTTGCGGCTCTGTGGAGCCAAATTCTTTAACTTATTTGAGTTTACTTACTGCTTGTTCTGGTTTGGAGGCACTAGAGGAAGGGCGTCAAATTCATGGTCTTATTTTGAAGTTGGGAATTCAGTCAGATTTGTGCATTGAGAGTGCTCTGATGGATATGTACTCGAAATCTGGAAGCATTGGATATGCTTGGAAGATTTTTGAGTCGGCTGAGGAACTTGATATGGTTTCATTGACTGTTATACTTGCAGGGTTCACTCAGAATGGGTGTGAGGATGAAGCCATTAGGATCTTTCTGAAAATGTTGAAGGTGGGGATCTTGATCGATGAGAATGTTGTTTCGGCCGCTCTTGGGGTGTTTGGTGCTGATACATCTTTGAGGCTGGGTCAGCAAGTTCACTCATTTGTTGTCAAAAGGAACTTTAGCTGCAATCCTTTTGTTGGCAATGGGCTTATAAACATGTACTCCAAGTGTGGAGCATTGGACGAGTCGGTCAAGGTCTTCGATAGGATGCGAGAAAGGAACTCGGTCACGTGGAACTCCATGATTGCAGCGTTTGCCCGGCATGGAGATGGCTCGAAAGCTCTATGTCTTTACGAGAATATGAAACTGGAAG

Protein sequence

NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADAVKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAIGFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAVISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLGIQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFLKMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCGALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE
Homology
BLAST of MC08g2260 vs. ExPASy Swiss-Prot
Match: Q9MA85 (Pentatricopeptide repeat-containing protein At3g05340 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E83 PE=2 SV=2)

HSP 1 Score: 407.5 bits (1046), Expect = 1.6e-112
Identity = 224/408 (54.90%), Postives = 266/408 (65.20%), Query Frame = 0

Query: 1   NHIDTSLFLSICGRENLL-HLGSSLHASIIKSFQLAN------HENGVVIANSLISMYQR 60
           NH+D SL LSICGRE    HLG  LHASIIK+ +         H N +V+ NSL+S+Y +
Sbjct: 43  NHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAK 102

Query: 61  CGKLADAVKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAI--------------- 120
           CGKL DA+K+FDEM  RD +S N +  GF+RN E+  GF   K +               
Sbjct: 103 CGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHATLTIVL 162

Query: 121 ----------------------GFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVI 180
                                 G+ +EI+VGN LI+SYFKCGC   GR VFD M  RNVI
Sbjct: 163 SVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVI 222

Query: 181 TWTAVISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGL 240
           T TAVISGL  N  HE  L+LF  +M  G V PNS+TYLS L ACSG + + EG+QIH L
Sbjct: 223 TLTAVISGLIENELHEDGLRLF-SLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHAL 282

Query: 241 ILKLGIQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEA 300
           + K GI+S+LCIESALMDMYSK GSI  AW IFES  E+D VS+TVIL G  QNG E+EA
Sbjct: 283 LWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEA 342

Query: 301 IRIFLKMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINM 360
           I+ F++ML+ G+ ID NVVSA LGV   D SL LG+Q+HS V+KR FS N FV NGLINM
Sbjct: 343 IQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINM 402

Query: 361 YSKCGALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENM 365
           YSKCG L +S  VF RM +RN V+WNSMIAAFARHG G  AL LYE M
Sbjct: 403 YSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM 449

BLAST of MC08g2260 vs. ExPASy Swiss-Prot
Match: Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.2e-57
Identity = 134/402 (33.33%), Postives = 215/402 (53.48%), Query Frame = 0

Query: 1   NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA 60
           N +     LS+C  + L+ LG  LH  ++ S    + E    I NSL+SMY +CG+  DA
Sbjct: 238 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG--VDFEGS--IKNSLLSMYSKCGRFDDA 297

Query: 61  VKVFDEMSRRDTVSWNALIAGFMRNG--ESCVGFSY-----------------------F 120
            K+F  MSR DTV+WN +I+G++++G  E  + F Y                       F
Sbjct: 298 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 357

Query: 121 KAIGFVQ-------------EITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAVI 180
           + + + +             +I + +ALI +YFKC  V   + +F +    +V+ +TA+I
Sbjct: 358 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 417

Query: 181 SGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLGI 240
           SG  HNG +  SL++F+ ++    + PN +T +S+L     L AL+ GR++HG I+K G 
Sbjct: 418 SGYLHNGLYIDSLEMFRWLVKV-KISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF 477

Query: 241 QSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFLK 300
            +   I  A++DMY+K G +  A++IFE   + D+VS   ++    Q+     AI IF +
Sbjct: 478 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQ 537

Query: 301 MLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCGA 360
           M   GI  D   +SAAL       S   G+ +H F++K + + + +  + LI+MY+KCG 
Sbjct: 538 MGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGN 597

Query: 361 LDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENM 365
           L  ++ VF  M+E+N V+WNS+IAA   HG    +LCL+  M
Sbjct: 598 LKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEM 634

BLAST of MC08g2260 vs. ExPASy Swiss-Prot
Match: P93005 (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.4e-55
Identity = 120/388 (30.93%), Postives = 205/388 (52.84%), Query Frame = 0

Query: 20  LGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADAVKVFDEMSRRDTVSWNALI 79
           +G   HA ++K     +    + +  SL+ MY + G + D +KVF  M  R+T +W+ ++
Sbjct: 136 VGRQAHALVVKMSSFGD----IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 195

Query: 80  AG----------------FMRNGESCVGFSY-FKAI-----------------------G 139
           +G                F+R  E      Y F A+                       G
Sbjct: 196 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNG 255

Query: 140 FVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAVISGLAHNGHHEHSLKLFK 199
            +  + + NAL++ Y KC  +    ++FD   +RN ITW+A+++G + NG    ++KLF 
Sbjct: 256 LLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFS 315

Query: 200 EMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLGIQSDLCIESALMDMYSKS 259
            M S G ++P+  T + +L ACS +  LEEG+Q+H  +LKLG +  L   +AL+DMY+K+
Sbjct: 316 RMFSAG-IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKA 375

Query: 260 GSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFLKMLKVGILIDENVVSAAL 319
           G +  A K F+  +E D+   T +++G+ QN   +EA+ ++ +M   GI+ ++  +++ L
Sbjct: 376 GCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVL 435

Query: 320 GVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCGALDESVKVFDRMRERNSV 368
               +  +L LG+QVH   +K  F     +G+ L  MYSKCG+L++   VF R   ++ V
Sbjct: 436 KACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVV 495

BLAST of MC08g2260 vs. ExPASy Swiss-Prot
Match: Q0WNP3 (Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A2 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.7e-54
Identity = 123/397 (30.98%), Postives = 204/397 (51.39%), Query Frame = 0

Query: 9   LSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADAVKVFDEMS 68
           L++C R     LG  +H +++K          +++ +SL+  Y +CG+L  A++ FD M 
Sbjct: 191 LNLCSRRAEFELGRQVHGNMVKV-----GVGNLIVESSLVYFYAQCGELTSALRAFDMME 250

Query: 69  RRDTVSWNALIAGFMRNGESCVGFSYF-------------------------KAIGFVQ- 128
            +D +SW A+I+   R G        F                         KA+ F + 
Sbjct: 251 EKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQ 310

Query: 129 ------------EITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAVISGLAHNGH 188
                       ++ VG +L+  Y KCG +   R+VFD M  RN +TWT++I+  A  G 
Sbjct: 311 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGF 370

Query: 189 HEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLGIQSDLCIES 248
            E ++ LF+ +M    +  N+LT +S+L AC  + AL  G+++H  I+K  I+ ++ I S
Sbjct: 371 GEEAISLFR-IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGS 430

Query: 249 ALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFLKMLKVGILI 308
            L+ +Y K G    A+ + +     D+VS T +++G +  G E EA+    +M++ G+  
Sbjct: 431 TLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEP 490

Query: 309 DENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCGALDESVKVF 368
           +    S+AL       SL +G+ +HS   K +   N FVG+ LI+MY+KCG + E+ +VF
Sbjct: 491 NPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVF 550

BLAST of MC08g2260 vs. ExPASy Swiss-Prot
Match: Q9LU94 (Putative pentatricopeptide repeat-containing protein At3g25970 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E46 PE=3 SV=2)

HSP 1 Score: 210.3 bits (534), Expect = 3.7e-53
Identity = 127/388 (32.73%), Postives = 205/388 (52.84%), Query Frame = 0

Query: 20  LGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADAVKVFDEMSRRDTVSWNALI 79
           LG  +H  +IK      +E  V + +SL+ MY +C ++ DA + F E+S  ++VSWNALI
Sbjct: 119 LGEQVHGLVIK----GGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALI 178

Query: 80  AGF-----MRNGESCVGFSYFKA----------------------------------IGF 139
           AGF     ++     +G    KA                                  +G 
Sbjct: 179 AGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL 238

Query: 140 VQEITVGNALISSYFKCGCVGFGRQVFDEM-EERNVITWTAVISGLAHNGHHEHSLKLFK 199
             EIT+ NA+ISSY  CG V   ++VFD +   +++I+W ++I+G + +   E + +LF 
Sbjct: 239 QHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFI 298

Query: 200 EMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLGIQSDLCIESALMDMYSK- 259
           +M     VE +  TY  LL+ACSG E    G+ +HG+++K G++      +AL+ MY + 
Sbjct: 299 QMQR-HWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQF 358

Query: 260 -SGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFLKMLKVGILIDENVVSA 319
            +G++  A  +FES +  D++S   I+ GF Q G  ++A++ F  +    I +D+   SA
Sbjct: 359 PTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSA 418

Query: 320 ALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCGALDESVKVFDRMRERN 365
            L       +L+LGQQ+H+   K  F  N FV + LI MYSKCG ++ + K F ++  ++
Sbjct: 419 LLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKH 478

BLAST of MC08g2260 vs. NCBI nr
Match: XP_022150755.1 (pentatricopeptide repeat-containing protein At3g05340 [Momordica charantia])

HSP 1 Score: 717 bits (1851), Expect = 1.45e-251
Identity = 366/406 (90.15%), Postives = 367/406 (90.39%), Query Frame = 0

Query: 1   NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA 60
           NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA
Sbjct: 44  NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA 103

Query: 61  VKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAI---------------------- 120
           VKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKA+                      
Sbjct: 104 VKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAMCLVGDCEFDKATLTTILSACDG 163

Query: 121 -----------------GFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAV 180
                            GFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAV
Sbjct: 164 FELCYVIKMIHGLAFLSGFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAV 223

Query: 181 ISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLG 240
           ISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLG
Sbjct: 224 ISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLG 283

Query: 241 IQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFL 300
           IQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFL
Sbjct: 284 IQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFL 343

Query: 301 KMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCG 360
           KMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCG
Sbjct: 344 KMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCG 403

Query: 361 ALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE 367
           ALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE
Sbjct: 404 ALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE 449

BLAST of MC08g2260 vs. NCBI nr
Match: KAG6579064.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 629 bits (1623), Expect = 9.48e-223
Identity = 322/406 (79.31%), Postives = 339/406 (83.50%), Query Frame = 0

Query: 1   NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA 60
           NH+D S  LS+CGR   L+LGSSLHASIIKSF+L+NHENGVVI NSLISMY+RCGKL DA
Sbjct: 44  NHVDPSFLLSVCGRHGNLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDA 103

Query: 61  VKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAI---------------------- 120
           VKVFDEM  RDTVSWNALI GFMRNGE   GFSYFKA+                      
Sbjct: 104 VKVFDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDG 163

Query: 121 -----------------GFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAV 180
                            G+ QEITVGNALISSYFKCGCVGFG+QVF E EERNVITWTAV
Sbjct: 164 AEMYCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGKQVFYETEERNVITWTAV 223

Query: 181 ISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLG 240
           ISGLA NGHHEHSL+LF+EMMSCGSVEPNSLTYLSLLTACSGLEALEEG QIHGLILKLG
Sbjct: 224 ISGLAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLG 283

Query: 241 IQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFL 300
           IQSDLCI SALMDMYSK GSIG AWKIFE AEELDMVSLTVILAGFTQNGCE+EAI+IFL
Sbjct: 284 IQSDLCIGSALMDMYSKCGSIGDAWKIFELAEELDMVSLTVILAGFTQNGCEEEAIQIFL 343

Query: 301 KMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCG 360
           KMLK+GI IDENVVSA LGVFGADTSLRLGQQVHSF+VK+NFSCNPFV NGLINMYSKCG
Sbjct: 344 KMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCG 403

Query: 361 ALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE 367
           ALDESVKVFDRM+ RNSVTWNSMIAAFARHGDGSKAL LYENMKLE
Sbjct: 404 ALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLE 449

BLAST of MC08g2260 vs. NCBI nr
Match: XP_022946256.1 (pentatricopeptide repeat-containing protein At3g05340 isoform X3 [Cucurbita moschata])

HSP 1 Score: 633 bits (1633), Expect = 1.59e-222
Identity = 322/406 (79.31%), Postives = 342/406 (84.24%), Query Frame = 0

Query: 1   NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA 60
           NH+D S  LS+CGR+  L+LGSSLHASIIKSF+L+NHENGVVI NSLISMY+RCGKL DA
Sbjct: 44  NHVDPSFLLSVCGRDGHLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDA 103

Query: 61  VKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAI---------------------- 120
           VKVFDEM  RDTVSWNALI GFMRNGE C GFSYFKA+                      
Sbjct: 104 VKVFDEMPTRDTVSWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDG 163

Query: 121 -----------------GFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAV 180
                            G+ QEITVGNALISSYFKCGCVGFG+QVF EMEERNVITWTAV
Sbjct: 164 LEMCCIIKMMHGLTFLSGYKQEITVGNALISSYFKCGCVGFGKQVFYEMEERNVITWTAV 223

Query: 181 ISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLG 240
           ISGLA NG+HEHSL+LF+EM+SCGSVEPNSLTYLSLLTACSGLEALEEG QIHGLILKLG
Sbjct: 224 ISGLAQNGYHEHSLELFREMLSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLG 283

Query: 241 IQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFL 300
           IQSDLCI SALMDMYSK GSIG AWKIFESAEELDMVSLTVILAGFTQNGCE+EAI+IFL
Sbjct: 284 IQSDLCIGSALMDMYSKCGSIGDAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFL 343

Query: 301 KMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCG 360
           KMLK+GI IDENVVSA LGVFGADTSLRLGQQVHSF+VK+NFSCNPFV NGLINMYSKCG
Sbjct: 344 KMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCG 403

Query: 361 ALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE 367
           ALDESVKVFDRM+ RNSVTWNSMIAAFARHGDG KAL LYENMKLE
Sbjct: 404 ALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGLKALHLYENMKLE 449

BLAST of MC08g2260 vs. NCBI nr
Match: XP_022946255.1 (pentatricopeptide repeat-containing protein At3g05340 isoform X2 [Cucurbita moschata])

HSP 1 Score: 633 bits (1633), Expect = 3.12e-222
Identity = 322/406 (79.31%), Postives = 342/406 (84.24%), Query Frame = 0

Query: 1   NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA 60
           NH+D S  LS+CGR+  L+LGSSLHASIIKSF+L+NHENGVVI NSLISMY+RCGKL DA
Sbjct: 44  NHVDPSFLLSVCGRDGHLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDA 103

Query: 61  VKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAI---------------------- 120
           VKVFDEM  RDTVSWNALI GFMRNGE C GFSYFKA+                      
Sbjct: 104 VKVFDEMPTRDTVSWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDG 163

Query: 121 -----------------GFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAV 180
                            G+ QEITVGNALISSYFKCGCVGFG+QVF EMEERNVITWTAV
Sbjct: 164 LEMCCIIKMMHGLTFLSGYKQEITVGNALISSYFKCGCVGFGKQVFYEMEERNVITWTAV 223

Query: 181 ISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLG 240
           ISGLA NG+HEHSL+LF+EM+SCGSVEPNSLTYLSLLTACSGLEALEEG QIHGLILKLG
Sbjct: 224 ISGLAQNGYHEHSLELFREMLSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLG 283

Query: 241 IQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFL 300
           IQSDLCI SALMDMYSK GSIG AWKIFESAEELDMVSLTVILAGFTQNGCE+EAI+IFL
Sbjct: 284 IQSDLCIGSALMDMYSKCGSIGDAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFL 343

Query: 301 KMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCG 360
           KMLK+GI IDENVVSA LGVFGADTSLRLGQQVHSF+VK+NFSCNPFV NGLINMYSKCG
Sbjct: 344 KMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCG 403

Query: 361 ALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE 367
           ALDESVKVFDRM+ RNSVTWNSMIAAFARHGDG KAL LYENMKLE
Sbjct: 404 ALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGLKALHLYENMKLE 449

BLAST of MC08g2260 vs. NCBI nr
Match: XP_022946254.1 (pentatricopeptide repeat-containing protein At3g05340 isoform X1 [Cucurbita moschata])

HSP 1 Score: 633 bits (1633), Expect = 3.34e-222
Identity = 322/406 (79.31%), Postives = 342/406 (84.24%), Query Frame = 0

Query: 1   NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA 60
           NH+D S  LS+CGR+  L+LGSSLHASIIKSF+L+NHENGVVI NSLISMY+RCGKL DA
Sbjct: 44  NHVDPSFLLSVCGRDGHLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDA 103

Query: 61  VKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAI---------------------- 120
           VKVFDEM  RDTVSWNALI GFMRNGE C GFSYFKA+                      
Sbjct: 104 VKVFDEMPTRDTVSWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDG 163

Query: 121 -----------------GFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAV 180
                            G+ QEITVGNALISSYFKCGCVGFG+QVF EMEERNVITWTAV
Sbjct: 164 LEMCCIIKMMHGLTFLSGYKQEITVGNALISSYFKCGCVGFGKQVFYEMEERNVITWTAV 223

Query: 181 ISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLG 240
           ISGLA NG+HEHSL+LF+EM+SCGSVEPNSLTYLSLLTACSGLEALEEG QIHGLILKLG
Sbjct: 224 ISGLAQNGYHEHSLELFREMLSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLG 283

Query: 241 IQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFL 300
           IQSDLCI SALMDMYSK GSIG AWKIFESAEELDMVSLTVILAGFTQNGCE+EAI+IFL
Sbjct: 284 IQSDLCIGSALMDMYSKCGSIGDAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFL 343

Query: 301 KMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCG 360
           KMLK+GI IDENVVSA LGVFGADTSLRLGQQVHSF+VK+NFSCNPFV NGLINMYSKCG
Sbjct: 344 KMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCG 403

Query: 361 ALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE 367
           ALDESVKVFDRM+ RNSVTWNSMIAAFARHGDG KAL LYENMKLE
Sbjct: 404 ALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGLKALHLYENMKLE 449

BLAST of MC08g2260 vs. ExPASy TrEMBL
Match: A0A6J1D9D8 (pentatricopeptide repeat-containing protein At3g05340 OS=Momordica charantia OX=3673 GN=LOC111018815 PE=3 SV=1)

HSP 1 Score: 717 bits (1851), Expect = 7.03e-252
Identity = 366/406 (90.15%), Postives = 367/406 (90.39%), Query Frame = 0

Query: 1   NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA 60
           NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA
Sbjct: 44  NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA 103

Query: 61  VKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAI---------------------- 120
           VKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKA+                      
Sbjct: 104 VKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAMCLVGDCEFDKATLTTILSACDG 163

Query: 121 -----------------GFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAV 180
                            GFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAV
Sbjct: 164 FELCYVIKMIHGLAFLSGFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAV 223

Query: 181 ISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLG 240
           ISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLG
Sbjct: 224 ISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLG 283

Query: 241 IQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFL 300
           IQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFL
Sbjct: 284 IQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFL 343

Query: 301 KMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCG 360
           KMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCG
Sbjct: 344 KMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCG 403

Query: 361 ALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE 367
           ALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE
Sbjct: 404 ALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE 449

BLAST of MC08g2260 vs. ExPASy TrEMBL
Match: A0A6J1G350 (pentatricopeptide repeat-containing protein At3g05340 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111450393 PE=3 SV=1)

HSP 1 Score: 633 bits (1633), Expect = 7.69e-223
Identity = 322/406 (79.31%), Postives = 342/406 (84.24%), Query Frame = 0

Query: 1   NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA 60
           NH+D S  LS+CGR+  L+LGSSLHASIIKSF+L+NHENGVVI NSLISMY+RCGKL DA
Sbjct: 44  NHVDPSFLLSVCGRDGHLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDA 103

Query: 61  VKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAI---------------------- 120
           VKVFDEM  RDTVSWNALI GFMRNGE C GFSYFKA+                      
Sbjct: 104 VKVFDEMPTRDTVSWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDG 163

Query: 121 -----------------GFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAV 180
                            G+ QEITVGNALISSYFKCGCVGFG+QVF EMEERNVITWTAV
Sbjct: 164 LEMCCIIKMMHGLTFLSGYKQEITVGNALISSYFKCGCVGFGKQVFYEMEERNVITWTAV 223

Query: 181 ISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLG 240
           ISGLA NG+HEHSL+LF+EM+SCGSVEPNSLTYLSLLTACSGLEALEEG QIHGLILKLG
Sbjct: 224 ISGLAQNGYHEHSLELFREMLSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLG 283

Query: 241 IQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFL 300
           IQSDLCI SALMDMYSK GSIG AWKIFESAEELDMVSLTVILAGFTQNGCE+EAI+IFL
Sbjct: 284 IQSDLCIGSALMDMYSKCGSIGDAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFL 343

Query: 301 KMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCG 360
           KMLK+GI IDENVVSA LGVFGADTSLRLGQQVHSF+VK+NFSCNPFV NGLINMYSKCG
Sbjct: 344 KMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCG 403

Query: 361 ALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE 367
           ALDESVKVFDRM+ RNSVTWNSMIAAFARHGDG KAL LYENMKLE
Sbjct: 404 ALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGLKALHLYENMKLE 449

BLAST of MC08g2260 vs. ExPASy TrEMBL
Match: A0A6J1G3C0 (pentatricopeptide repeat-containing protein At3g05340 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450393 PE=3 SV=1)

HSP 1 Score: 633 bits (1633), Expect = 1.51e-222
Identity = 322/406 (79.31%), Postives = 342/406 (84.24%), Query Frame = 0

Query: 1   NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA 60
           NH+D S  LS+CGR+  L+LGSSLHASIIKSF+L+NHENGVVI NSLISMY+RCGKL DA
Sbjct: 44  NHVDPSFLLSVCGRDGHLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDA 103

Query: 61  VKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAI---------------------- 120
           VKVFDEM  RDTVSWNALI GFMRNGE C GFSYFKA+                      
Sbjct: 104 VKVFDEMPTRDTVSWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDG 163

Query: 121 -----------------GFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAV 180
                            G+ QEITVGNALISSYFKCGCVGFG+QVF EMEERNVITWTAV
Sbjct: 164 LEMCCIIKMMHGLTFLSGYKQEITVGNALISSYFKCGCVGFGKQVFYEMEERNVITWTAV 223

Query: 181 ISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLG 240
           ISGLA NG+HEHSL+LF+EM+SCGSVEPNSLTYLSLLTACSGLEALEEG QIHGLILKLG
Sbjct: 224 ISGLAQNGYHEHSLELFREMLSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLG 283

Query: 241 IQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFL 300
           IQSDLCI SALMDMYSK GSIG AWKIFESAEELDMVSLTVILAGFTQNGCE+EAI+IFL
Sbjct: 284 IQSDLCIGSALMDMYSKCGSIGDAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFL 343

Query: 301 KMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCG 360
           KMLK+GI IDENVVSA LGVFGADTSLRLGQQVHSF+VK+NFSCNPFV NGLINMYSKCG
Sbjct: 344 KMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCG 403

Query: 361 ALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE 367
           ALDESVKVFDRM+ RNSVTWNSMIAAFARHGDG KAL LYENMKLE
Sbjct: 404 ALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGLKALHLYENMKLE 449

BLAST of MC08g2260 vs. ExPASy TrEMBL
Match: A0A6J1G3A2 (pentatricopeptide repeat-containing protein At3g05340 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450393 PE=3 SV=1)

HSP 1 Score: 633 bits (1633), Expect = 1.62e-222
Identity = 322/406 (79.31%), Postives = 342/406 (84.24%), Query Frame = 0

Query: 1   NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA 60
           NH+D S  LS+CGR+  L+LGSSLHASIIKSF+L+NHENGVVI NSLISMY+RCGKL DA
Sbjct: 44  NHVDPSFLLSVCGRDGHLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDA 103

Query: 61  VKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAI---------------------- 120
           VKVFDEM  RDTVSWNALI GFMRNGE C GFSYFKA+                      
Sbjct: 104 VKVFDEMPTRDTVSWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDG 163

Query: 121 -----------------GFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAV 180
                            G+ QEITVGNALISSYFKCGCVGFG+QVF EMEERNVITWTAV
Sbjct: 164 LEMCCIIKMMHGLTFLSGYKQEITVGNALISSYFKCGCVGFGKQVFYEMEERNVITWTAV 223

Query: 181 ISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLG 240
           ISGLA NG+HEHSL+LF+EM+SCGSVEPNSLTYLSLLTACSGLEALEEG QIHGLILKLG
Sbjct: 224 ISGLAQNGYHEHSLELFREMLSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLG 283

Query: 241 IQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFL 300
           IQSDLCI SALMDMYSK GSIG AWKIFESAEELDMVSLTVILAGFTQNGCE+EAI+IFL
Sbjct: 284 IQSDLCIGSALMDMYSKCGSIGDAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFL 343

Query: 301 KMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCG 360
           KMLK+GI IDENVVSA LGVFGADTSLRLGQQVHSF+VK+NFSCNPFV NGLINMYSKCG
Sbjct: 344 KMLKMGIEIDENVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCG 403

Query: 361 ALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE 367
           ALDESVKVFDRM+ RNSVTWNSMIAAFARHGDG KAL LYENMKLE
Sbjct: 404 ALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGLKALHLYENMKLE 449

BLAST of MC08g2260 vs. ExPASy TrEMBL
Match: A0A6J1KFW9 (pentatricopeptide repeat-containing protein At3g05340 OS=Cucurbita maxima OX=3661 GN=LOC111493539 PE=3 SV=1)

HSP 1 Score: 632 bits (1631), Expect = 3.36e-222
Identity = 323/406 (79.56%), Postives = 341/406 (83.99%), Query Frame = 0

Query: 1   NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA 60
           NH+D S  LS+CGR+  L+LGSSLHASIIKSF+L+NHENGVVI NSLISMY+RCGKL DA
Sbjct: 44  NHVDPSFLLSVCGRDGHLYLGSSLHASIIKSFELSNHENGVVIMNSLISMYERCGKLPDA 103

Query: 61  VKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAI---------------------- 120
           VKVFDEM  RDTVSWNALI GFMRNGE   GFSYFKA+                      
Sbjct: 104 VKVFDEMPTRDTVSWNALIGGFMRNGEFYAGFSYFKAMCLVGDCKFDKATLTTILSACDG 163

Query: 121 -----------------GFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAV 180
                            G+ QEITVGNALISSYFKCGCVGFGRQ+F EMEERNVITWTAV
Sbjct: 164 SEMCCIIEMMHGLTFLSGYEQEITVGNALISSYFKCGCVGFGRQLFYEMEERNVITWTAV 223

Query: 181 ISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLG 240
           ISGLA NGHHEHSL+LF+EMMSCGSVEPNSLTYLSLLTACSGLEALEEG QIHGLILKLG
Sbjct: 224 ISGLAQNGHHEHSLELFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLG 283

Query: 241 IQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFL 300
           IQSDLCI SALMDMYSK GSIG AWKIFESAEELDMVSLTVILAGFTQNGCE+EAI+IFL
Sbjct: 284 IQSDLCIGSALMDMYSKCGSIGDAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFL 343

Query: 301 KMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCG 360
           KMLK+GI ID NVVSA LGVFGADTSLRLGQQVHSF+VK+NFSCNPFV NGLINMYSKCG
Sbjct: 344 KMLKMGIEIDANVVSAVLGVFGADTSLRLGQQVHSFIVKKNFSCNPFVSNGLINMYSKCG 403

Query: 361 ALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENMKLE 367
           ALDESVKVFDRM+ RNSVTWNSMIAAFARHGDGSKAL LYENMKLE
Sbjct: 404 ALDESVKVFDRMQNRNSVTWNSMIAAFARHGDGSKALHLYENMKLE 449

BLAST of MC08g2260 vs. TAIR 10
Match: AT3G05340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 407.5 bits (1046), Expect = 1.1e-113
Identity = 224/408 (54.90%), Postives = 266/408 (65.20%), Query Frame = 0

Query: 1   NHIDTSLFLSICGRENLL-HLGSSLHASIIKSFQLAN------HENGVVIANSLISMYQR 60
           NH+D SL LSICGRE    HLG  LHASIIK+ +         H N +V+ NSL+S+Y +
Sbjct: 43  NHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAK 102

Query: 61  CGKLADAVKVFDEMSRRDTVSWNALIAGFMRNGESCVGFSYFKAI--------------- 120
           CGKL DA+K+FDEM  RD +S N +  GF+RN E+  GF   K +               
Sbjct: 103 CGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHATLTIVL 162

Query: 121 ----------------------GFVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVI 180
                                 G+ +EI+VGN LI+SYFKCGC   GR VFD M  RNVI
Sbjct: 163 SVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVI 222

Query: 181 TWTAVISGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGL 240
           T TAVISGL  N  HE  L+LF  +M  G V PNS+TYLS L ACSG + + EG+QIH L
Sbjct: 223 TLTAVISGLIENELHEDGLRLF-SLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHAL 282

Query: 241 ILKLGIQSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEA 300
           + K GI+S+LCIESALMDMYSK GSI  AW IFES  E+D VS+TVIL G  QNG E+EA
Sbjct: 283 LWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEA 342

Query: 301 IRIFLKMLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINM 360
           I+ F++ML+ G+ ID NVVSA LGV   D SL LG+Q+HS V+KR FS N FV NGLINM
Sbjct: 343 IQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINM 402

Query: 361 YSKCGALDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENM 365
           YSKCG L +S  VF RM +RN V+WNSMIAAFARHG G  AL LYE M
Sbjct: 403 YSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM 449

BLAST of MC08g2260 vs. TAIR 10
Match: AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 223.4 bits (568), Expect = 3.0e-58
Identity = 134/402 (33.33%), Postives = 215/402 (53.48%), Query Frame = 0

Query: 1   NHIDTSLFLSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADA 60
           N +     LS+C  + L+ LG  LH  ++ S    + E    I NSL+SMY +CG+  DA
Sbjct: 238 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG--VDFEGS--IKNSLLSMYSKCGRFDDA 297

Query: 61  VKVFDEMSRRDTVSWNALIAGFMRNG--ESCVGFSY-----------------------F 120
            K+F  MSR DTV+WN +I+G++++G  E  + F Y                       F
Sbjct: 298 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 357

Query: 121 KAIGFVQ-------------EITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAVI 180
           + + + +             +I + +ALI +YFKC  V   + +F +    +V+ +TA+I
Sbjct: 358 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 417

Query: 181 SGLAHNGHHEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLGI 240
           SG  HNG +  SL++F+ ++    + PN +T +S+L     L AL+ GR++HG I+K G 
Sbjct: 418 SGYLHNGLYIDSLEMFRWLVKV-KISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF 477

Query: 241 QSDLCIESALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFLK 300
            +   I  A++DMY+K G +  A++IFE   + D+VS   ++    Q+     AI IF +
Sbjct: 478 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQ 537

Query: 301 MLKVGILIDENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCGA 360
           M   GI  D   +SAAL       S   G+ +H F++K + + + +  + LI+MY+KCG 
Sbjct: 538 MGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGN 597

Query: 361 LDESVKVFDRMRERNSVTWNSMIAAFARHGDGSKALCLYENM 365
           L  ++ VF  M+E+N V+WNS+IAA   HG    +LCL+  M
Sbjct: 598 LKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEM 634

BLAST of MC08g2260 vs. TAIR 10
Match: AT2G33680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 218.4 bits (555), Expect = 9.6e-57
Identity = 120/388 (30.93%), Postives = 205/388 (52.84%), Query Frame = 0

Query: 20  LGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADAVKVFDEMSRRDTVSWNALI 79
           +G   HA ++K     +    + +  SL+ MY + G + D +KVF  M  R+T +W+ ++
Sbjct: 136 VGRQAHALVVKMSSFGD----IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 195

Query: 80  AG----------------FMRNGESCVGFSY-FKAI-----------------------G 139
           +G                F+R  E      Y F A+                       G
Sbjct: 196 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNG 255

Query: 140 FVQEITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAVISGLAHNGHHEHSLKLFK 199
            +  + + NAL++ Y KC  +    ++FD   +RN ITW+A+++G + NG    ++KLF 
Sbjct: 256 LLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFS 315

Query: 200 EMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLGIQSDLCIESALMDMYSKS 259
            M S G ++P+  T + +L ACS +  LEEG+Q+H  +LKLG +  L   +AL+DMY+K+
Sbjct: 316 RMFSAG-IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKA 375

Query: 260 GSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFLKMLKVGILIDENVVSAAL 319
           G +  A K F+  +E D+   T +++G+ QN   +EA+ ++ +M   GI+ ++  +++ L
Sbjct: 376 GCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVL 435

Query: 320 GVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCGALDESVKVFDRMRERNSV 368
               +  +L LG+QVH   +K  F     +G+ L  MYSKCG+L++   VF R   ++ V
Sbjct: 436 KACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVV 495

BLAST of MC08g2260 vs. TAIR 10
Match: AT4G18520.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 213.0 bits (541), Expect = 4.0e-55
Identity = 123/397 (30.98%), Postives = 204/397 (51.39%), Query Frame = 0

Query: 9   LSICGRENLLHLGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADAVKVFDEMS 68
           L++C R     LG  +H +++K          +++ +SL+  Y +CG+L  A++ FD M 
Sbjct: 191 LNLCSRRAEFELGRQVHGNMVKV-----GVGNLIVESSLVYFYAQCGELTSALRAFDMME 250

Query: 69  RRDTVSWNALIAGFMRNGESCVGFSYF-------------------------KAIGFVQ- 128
            +D +SW A+I+   R G        F                         KA+ F + 
Sbjct: 251 EKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQ 310

Query: 129 ------------EITVGNALISSYFKCGCVGFGRQVFDEMEERNVITWTAVISGLAHNGH 188
                       ++ VG +L+  Y KCG +   R+VFD M  RN +TWT++I+  A  G 
Sbjct: 311 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGF 370

Query: 189 HEHSLKLFKEMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLGIQSDLCIES 248
            E ++ LF+ +M    +  N+LT +S+L AC  + AL  G+++H  I+K  I+ ++ I S
Sbjct: 371 GEEAISLFR-IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGS 430

Query: 249 ALMDMYSKSGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFLKMLKVGILI 308
            L+ +Y K G    A+ + +     D+VS T +++G +  G E EA+    +M++ G+  
Sbjct: 431 TLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEP 490

Query: 309 DENVVSAALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCGALDESVKVF 368
           +    S+AL       SL +G+ +HS   K +   N FVG+ LI+MY+KCG + E+ +VF
Sbjct: 491 NPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVF 550

BLAST of MC08g2260 vs. TAIR 10
Match: AT3G25970.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 210.3 bits (534), Expect = 2.6e-54
Identity = 127/388 (32.73%), Postives = 205/388 (52.84%), Query Frame = 0

Query: 20  LGSSLHASIIKSFQLANHENGVVIANSLISMYQRCGKLADAVKVFDEMSRRDTVSWNALI 79
           LG  +H  +IK      +E  V + +SL+ MY +C ++ DA + F E+S  ++VSWNALI
Sbjct: 119 LGEQVHGLVIK----GGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALI 178

Query: 80  AGF-----MRNGESCVGFSYFKA----------------------------------IGF 139
           AGF     ++     +G    KA                                  +G 
Sbjct: 179 AGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL 238

Query: 140 VQEITVGNALISSYFKCGCVGFGRQVFDEM-EERNVITWTAVISGLAHNGHHEHSLKLFK 199
             EIT+ NA+ISSY  CG V   ++VFD +   +++I+W ++I+G + +   E + +LF 
Sbjct: 239 QHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFI 298

Query: 200 EMMSCGSVEPNSLTYLSLLTACSGLEALEEGRQIHGLILKLGIQSDLCIESALMDMYSK- 259
           +M     VE +  TY  LL+ACSG E    G+ +HG+++K G++      +AL+ MY + 
Sbjct: 299 QMQR-HWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQF 358

Query: 260 -SGSIGYAWKIFESAEELDMVSLTVILAGFTQNGCEDEAIRIFLKMLKVGILIDENVVSA 319
            +G++  A  +FES +  D++S   I+ GF Q G  ++A++ F  +    I +D+   SA
Sbjct: 359 PTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSA 418

Query: 320 ALGVFGADTSLRLGQQVHSFVVKRNFSCNPFVGNGLINMYSKCGALDESVKVFDRMRERN 365
            L       +L+LGQQ+H+   K  F  N FV + LI MYSKCG ++ + K F ++  ++
Sbjct: 419 LLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKH 478

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9MA851.6e-11254.90Pentatricopeptide repeat-containing protein At3g05340 OS=Arabidopsis thaliana OX... [more]
Q9STE14.2e-5733.33Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... [more]
P930051.4e-5530.93Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX... [more]
Q0WNP35.7e-5430.98Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidop... [more]
Q9LU943.7e-5332.73Putative pentatricopeptide repeat-containing protein At3g25970 OS=Arabidopsis th... [more]
Match NameE-valueIdentityDescription
XP_022150755.11.45e-25190.15pentatricopeptide repeat-containing protein At3g05340 [Momordica charantia][more]
KAG6579064.19.48e-22379.31Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022946256.11.59e-22279.31pentatricopeptide repeat-containing protein At3g05340 isoform X3 [Cucurbita mosc... [more]
XP_022946255.13.12e-22279.31pentatricopeptide repeat-containing protein At3g05340 isoform X2 [Cucurbita mosc... [more]
XP_022946254.13.34e-22279.31pentatricopeptide repeat-containing protein At3g05340 isoform X1 [Cucurbita mosc... [more]
Match NameE-valueIdentityDescription
A0A6J1D9D87.03e-25290.15pentatricopeptide repeat-containing protein At3g05340 OS=Momordica charantia OX=... [more]
A0A6J1G3507.69e-22379.31pentatricopeptide repeat-containing protein At3g05340 isoform X3 OS=Cucurbita mo... [more]
A0A6J1G3C01.51e-22279.31pentatricopeptide repeat-containing protein At3g05340 isoform X2 OS=Cucurbita mo... [more]
A0A6J1G3A21.62e-22279.31pentatricopeptide repeat-containing protein At3g05340 isoform X1 OS=Cucurbita mo... [more]
A0A6J1KFW93.36e-22279.56pentatricopeptide repeat-containing protein At3g05340 OS=Cucurbita maxima OX=366... [more]
Match NameE-valueIdentityDescription
AT3G05340.11.1e-11354.90Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G21300.13.0e-5833.33Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G33680.19.6e-5730.93Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G18520.14.0e-5530.98Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G25970.12.6e-5432.73Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 286..367
e-value: 6.1E-18
score: 67.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 97..187
e-value: 2.9E-21
score: 77.6
coord: 188..285
e-value: 2.5E-12
score: 48.5
coord: 1..96
e-value: 7.9E-14
score: 53.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 133..181
e-value: 1.3E-11
score: 44.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 311..337
e-value: 5.4E-5
score: 23.2
coord: 44..70
e-value: 5.2E-5
score: 23.2
coord: 73..87
e-value: 0.35
score: 11.2
coord: 238..268
e-value: 0.0015
score: 18.6
coord: 339..365
e-value: 6.1E-7
score: 29.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 311..337
e-value: 0.0022
score: 16.0
coord: 45..71
e-value: 8.3E-5
score: 20.5
coord: 239..271
e-value: 7.5E-4
score: 17.5
coord: 108..134
e-value: 1.4E-4
score: 19.8
coord: 136..170
e-value: 5.3E-8
score: 30.6
coord: 339..365
e-value: 3.4E-6
score: 24.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 134..168
score: 10.665402
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 337..367
score: 10.47906
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 236..270
score: 9.076014
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 306..336
score: 9.382931
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 40..74
score: 9.646002
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 98..365
coord: 2..98
NoneNo IPR availablePANTHERPTHR24015:SF563PENTATRICOPEPTIDE REPEAT FAMILY PROTEIN-RELATEDcoord: 98..365
NoneNo IPR availablePANTHERPTHR24015:SF563PENTATRICOPEPTIDE REPEAT FAMILY PROTEIN-RELATEDcoord: 2..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g2260.1MC08g2260.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding