MC08g2258 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g2258
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	F-box domain LysM domain containing protein
Location	MC08: 31399727 .. 31402252 (-)
RNA-Seq Expression	MC08g2258
Synteny	MC08g2258

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTATTATATCGTAATTTTCAAATAAAACCCAACTAATAACCAACCATCGTTTCTCTCTCTCTCCAGAAATGGGATGCTGTTGCGATCAAGACGACGACGTTGAGATCTTGAGGCACCTCAATCCCGCGATCGCCGTTCACTCTCCGGCCACCTTACCTCCGGAGGCGGATTCCTCCACCGCCGTATTATCTCCGATGAACTCCCACTTCTTCGCCCTATCGTGCCGCGACATCCTACGCCTCATCTTCGAGAAGCTTTCGATTCCCGACTTGGCTCGTTCCAGCTGCGTCTGCCGTCTCTGGCAGTCGGTTGCTTCCGATCATGAGATCGTCGCCGGAGCTTTCAAAGCTCCTTGGAAACTAAAAGACGTGATAGGGAAGCCCAGCTCCGGTAGCTTCTGGAGAGACAATTGTCTCGGAAAGTTTGCGATCTCCCATCGGATTCTCCGCGGCGATAGCTTGGCAAGTCTAGCCGTCAAGTATTCGGTTCAGGTATGGGCTTCGGAAAATGTTGTTGTCTAATTCATGAGGAAGTGACTGGAAATTAGGAAAGGAATGAGTAGAATTTCTGTGAATTTATTCAGTTTTGAAGAGTTGCGATCATCAATTTTCCTTCCTCAGGAAAAGTGACGATCGTATGATCGTTTTTCATTGAAGAACGCTATTTTCTTCTTTATTTATTGAATGTGAAATTGGACAGGCTGAAAGTAAGGGAACTTGGGTACAGTGAATATTTTGATCTTTCAGTATTCCTTTTGTACCTAAATGGTTTGTTGCAGCAATGTAGTTATAAGTACTCATTTTCTTAAACATTGATTTGGAAGAATCACTGGAACTTGTAACATAAATTCAAGTTTATATATCTTTTACAACATTGCATGTGCTACAAGAATTGAAGAGTGGATTTGTTCTTGATACTTTGTAGTATGTGTGCCCAACTCCCAAGTCCTCGTAAAATATCAATTAGGAAGGAGGGTCGAGTCCAATTGTTGATCTGAACTCTTTTTGATGGCTATGGACTTTGATGTATTGTTGAAATCACTAGCGGGGCATTTAGGGCATGGGTGAGGCTTGATGTGGGTTTGGCATCCTAGGCTCAAGCCAAATTTGGGGGCAAAGTTGTCAAACTCGAGTTTAATTGAAGAAAAATCGTGAGGCTTGAGGTGGGTTTGGCTTCCTAAGCTCAAGCCACATTTGGGGAAGAAGTTTTTAAACTCGAGTTTAATGGGAGAAATAAACAGGCTCGAACCGTAGTCCACTATTCAAGCCTTCACACATAGTTTTCCTAAACCCGATCTTTCATAACGTACTCCCCAAATACAGTTTGCTTAAACCCTCCACTTAAATGCACACGCTGAAGATGCCAAATTGGCATCCTAGTCGCCCATAGTAGTAACTTTATTTAAAACTTGTATATCTTTCAATGCACAAAAATGAAGAGTGCATTTGTTGTTGTACTTCAGTAGTTTGTTTTCTCAACTCCCAAATCCTTGTAAATCGTTAAATGTCAATTTGTAAGGGTCAAGTTCAACTGTTGAGATCAACACTTTTGGAGGCTGTGGACTTTGGTGTATTGTTGAAACCACTAGTAAGGGTCGAGTCAATTGTTGGGATCAATATTTTTTTATGGCTTTGAACTTGGGTGGGTTGATTTTGTAAATATGTTCTTGTAGGTTATGGACATAAAACGTCTAAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCCCCATTGGAAATCCCAATATACTTATTAACAGTATATGCTACATCGAGATGGATGCGATCGCGAAACGGGAAGTTGCAGTGTTGTATTTGGATGGCATCCCGACAACCCATCATCTGTATGGTAAGGTGACATGTGAACAGGGTATGTCCTCTGTTCAAGTGAATAAGCAGGTACTTCATTCTTTGAGTCGGAGCATGATGGTGGATGATGAAACCGCTCGATATTACTTGTCCATTTCCCATGGAGATCCTCGAGCTGCTCTCACAGAATTCGCCGAGGACATTAGGTGGGAGAGGCATATGAGCATTGCCTAATTTCAGAAAGGCAGATTGTTGCTAGGAGTAAAACATGGTGTGTTCGAGTTTGAGGTTGGTAAGGCTTGAAATACAGTTGCTGTCTATTGGAATCTGTTGATCTTCTCCATCTCCACAAAGAATGATCAGATTAAGAATTCATATCCAACACCATTTCACTCCTTGGCTGATTGGTATGTACATTCTTCCTGTCGTTTGAGTGACGCATATGGTTGTGTTGTTCGATGTCATATATATGATGTATTTTCATATTGCTTAAGGATGATGATGCTAGAATCATTGTAACTGTAAATAGAATGTGCTCGGAAATTATAATCATGTCTGTTTCGTCATAAATAGAATGTGCTCGGAAATTATAATCATGTCTGTTTAGTCACAAAAATTGTAGATGAACTTTCTTCCGCTGGGAATTTATGTGCATTGCCATATAATTGAATCACACCAGTTCGGGGTGCAAGCGAGTCG

mRNA sequence

CATTATTATATCGTAATTTTCAAATAAAACCCAACTAATAACCAACCATCGTTTCTCTCTCTCTCCAGAAATGGGATGCTGTTGCGATCAAGACGACGACGTTGAGATCTTGAGGCACCTCAATCCCGCGATCGCCGTTCACTCTCCGGCCACCTTACCTCCGGAGGCGGATTCCTCCACCGCCGTATTATCTCCGATGAACTCCCACTTCTTCGCCCTATCGTGCCGCGACATCCTACGCCTCATCTTCGAGAAGCTTTCGATTCCCGACTTGGCTCGTTCCAGCTGCGTCTGCCGTCTCTGGCAGTCGGTTGCTTCCGATCATGAGATCGTCGCCGGAGCTTTCAAAGCTCCTTGGAAACTAAAAGACGTGATAGGGAAGCCCAGCTCCGGTAGCTTCTGGAGAGACAATTGTCTCGGAAAGTTTGCGATCTCCCATCGGATTCTCCGCGGCGATAGCTTGGCAAGTCTAGCCGTCAAGTATTCGGTTCAGGTTATGGACATAAAACGTCTAAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCCCCATTGGAAATCCCAATATACTTATTAACAGTATATGCTACATCGAGATGGATGCGATCGCGAAACGGGAAGTTGCAGTGTTGTATTTGGATGGCATCCCGACAACCCATCATCTGTATGGTAAGGTGACATGTGAACAGGGTATGTCCTCTGTTCAAGTGAATAAGCAGGTACTTCATTCTTTGAGTCGGAGCATGATGGTGGATGATGAAACCGCTCGATATTACTTGTCCATTTCCCATGGAGATCCTCGAGCTGCTCTCACAGAATTCGCCGAGGACATTAGGTGGGAGAGGCATATGAGCATTGCCTAATTTCAGAAAGGCAGATTGTTGCTAGGAGTAAAACATGGTGTGTTCGAGTTTGAGGTTGGTAAGGCTTGAAATACAGTTGCTGTCTATTGGAATCTGTTGATCTTCTCCATCTCCACAAAGAATGATCAGATTAAGAATTCATATCCAACACCATTTCACTCCTTGGCTGATTGGTATGTACATTCTTCCTGTCGTTTGAGTGACGCATATGGTTGTGTTGTTCGATGTCATATATATGATGTATTTTCATATTGCTTAAGGATGATGATGCTAGAATCATTGTAACTGTAAATAGAATGTGCTCGGAAATTATAATCATGTCTGTTTCGTCATAAATAGAATGTGCTCGGAAATTATAATCATGTCTGTTTAGTCACAAAAATTGTAGATGAACTTTCTTCCGCTGGGAATTTATGTGCATTGCCATATAATTGAATCACACCAGTTCGGGGTGCAAGCGAGTCG

Coding sequence (CDS)

ATGGGATGCTGTTGCGATCAAGACGACGACGTTGAGATCTTGAGGCACCTCAATCCCGCGATCGCCGTTCACTCTCCGGCCACCTTACCTCCGGAGGCGGATTCCTCCACCGCCGTATTATCTCCGATGAACTCCCACTTCTTCGCCCTATCGTGCCGCGACATCCTACGCCTCATCTTCGAGAAGCTTTCGATTCCCGACTTGGCTCGTTCCAGCTGCGTCTGCCGTCTCTGGCAGTCGGTTGCTTCCGATCATGAGATCGTCGCCGGAGCTTTCAAAGCTCCTTGGAAACTAAAAGACGTGATAGGGAAGCCCAGCTCCGGTAGCTTCTGGAGAGACAATTGTCTCGGAAAGTTTGCGATCTCCCATCGGATTCTCCGCGGCGATAGCTTGGCAAGTCTAGCCGTCAAGTATTCGGTTCAGGTTATGGACATAAAACGTCTAAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCCCCATTGGAAATCCCAATATACTTATTAACAGTATATGCTACATCGAGATGGATGCGATCGCGAAACGGGAAGTTGCAGTGTTGTATTTGGATGGCATCCCGACAACCCATCATCTGTATGGTAAGGTGACATGTGAACAGGGTATGTCCTCTGTTCAAGTGAATAAGCAGGTACTTCATTCTTTGAGTCGGAGCATGATGGTGGATGATGAAACCGCTCGATATTACTTGTCCATTTCCCATGGAGATCCTCGAGCTGCTCTCACAGAATTCGCCGAGGACATTAGGTGGGAGAGGCATATGAGCATTGCCTAA

Protein sequence

MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA

Homology

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BLAST of MC08g2258 vs. ExPASy Swiss-Prot
Match: Q9FZ32 (F-box protein At1g55000 OS=Arabidopsis thaliana OX=3702 GN=At1g55000 PE=1 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 7.3e-75
Identity = 134/220 (60.91%), Postives = 172/220 (78.18%), Query Frame = 0


Query: 49  ALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSG 108
           AL CRD L +IF+KL++ DLAR+SCVC++W SVA++ ++V  AF APW++K+++G+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 109 SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIG 168
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQVMDIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 169 NPNILINSICYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLS 228
           NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    ++++ SL 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 229 RSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSI 269
           RSM VDD TA YYL+I+ GDPR+AL+EF+ D+RWER   +
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

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BLAST of MC08g2258 vs. ExPASy Swiss-Prot
Match: Q5HZA4 (LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Lysmd1 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.7e-04
Identity = 29/88 (32.95%), Postives = 48/88 (54.55%), Query Frame = 0


Query: 106 SSGSFWRDNC--LGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERL 165
           S GS  + +C  + +  + H++  GD+LA LA+KY V +  IKR N + ++  I+ ++ L
Sbjct: 23  SYGSLVQSSCSPVRERRLEHQLEPGDTLAGLALKYGVTMEQIKRTNRLYTNDSIFLKKTL 82

Query: 166 LIPI-GNPNILINSICYIEMDAIAKREV 191
            IPI   P  L N +   E +   + EV
Sbjct: 83  YIPILTEPRDLFNGLDSEEEENDGEEEV 110

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BLAST of MC08g2258 vs. NCBI nr
Match: XP_022150720.1 (F-box protein At1g55000 [Momordica charantia])

HSP 1 Score: 546 bits (1408), Expect = 3.03e-196
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF 60

Query: 61  EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA 120
           EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA
Sbjct: 61  EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY 240
           EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY
Sbjct: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY 240

Query: 241 YLSISHGDPRAALTEFAEDIRWERHMSIA 269
           YLSISHGDPRAALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISHGDPRAALTEFAEDIRWERHMSIA 269

[Close]

BLAST of MC08g2258 vs. NCBI nr
Match: XP_004139174.1 (F-box protein At1g55000 [Cucumis sativus] >KGN60915.1 hypothetical protein Csa_023439 [Cucumis sativus])

HSP 1 Score: 495 bits (1275), Expect = 5.71e-176
Identity = 243/269 (90.33%), Postives = 254/269 (94.42%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCCDQDDDVEILRHLNP+ A+HSP   PP AD S A+LSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIF 60

Query: 61  EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA 120
           E LSIPDLARSSCVCRLW SVASD EIV+GAFKAPWK+KDV+GKPSS SFWRDNCLGKFA
Sbjct: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPN+LINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY 240
           EMDAIAKREVAVLYLDGIP T HLYGKVT EQGMSSVQVNK+VLHSLSRSMMVDDETA+Y
Sbjct: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240

Query: 241 YLSISHGDPRAALTEFAEDIRWERHMSIA 269
           YLSIS+G+PRAALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISNGNPRAALTEFAEDIRWERHMSIA 269

[Close]

BLAST of MC08g2258 vs. NCBI nr
Match: XP_022937590.1 (F-box protein At1g55000 [Cucurbita moschata])

HSP 1 Score: 483 bits (1242), Expect = 6.34e-171
Identity = 241/270 (89.26%), Postives = 251/270 (92.96%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEA-DSSTAVLSPMNSHFFALSCRDILRLI 60
           MGCCCD+DDDVEILRHL+P+  V SP    P   DSSTAVLSPMNSHFFALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPDSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKF 120
           FEKLSIPDLARSSCV RLW SVASD EIV+GAFKAPWK+KDVIGKPSSGSFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180
           AISHRILRGDSLASLAVKYSVQV+DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETAR 240
           IEMDAIAKREVA LYLDGIPTTHHLYGK T +QGMSSVQV K+VLHSLSRSMMVDDETA+
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETNDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISHGDPRAALTEFAEDIRWERHMSIA 269
           YYLSIS GDPRAALTEFAEDIRWERHM +A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of MC08g2258 vs. NCBI nr
Match: KAG6586259.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021103.1 F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 481 bits (1239), Expect = 1.82e-170
Identity = 240/270 (88.89%), Postives = 251/270 (92.96%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEA-DSSTAVLSPMNSHFFALSCRDILRLI 60
           MGCCCD+DDDVEILRHL+P+  V SP    P   DSSTAVLSPMNSHFFALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPDSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKF 120
           FEKLSIPDLARSSCV RLW SVASD EIV+GAFKAPWK+KDVIGKPSSGSFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180
           AISHRILRGDSLASLAVKYSVQV+DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETAR 240
           IEMDAIAKREVA LYLDGIPTTHHLYG+ T +QGMSSVQV K+VLHSLSRSMMVDDETA+
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGRETNDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISHGDPRAALTEFAEDIRWERHMSIA 269
           YYLSIS GDPRAALTEFAEDIRWERHM +A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of MC08g2258 vs. NCBI nr
Match: XP_038877035.1 (F-box protein At1g55000 [Benincasa hispida])

HSP 1 Score: 481 bits (1238), Expect = 2.49e-170
Identity = 238/269 (88.48%), Postives = 248/269 (92.19%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCCDQDDDVEILRHLNP+  V S    PP  DSS  VLSPMNSHF ALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPPVQSLPPEPPPEDSSAVVLSPMNSHFLALSCRDILRLIF 60

Query: 61  EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA 120
           E LSIPDLARSSCV RLW SVASD EIV+GAFKAPWK+KDV+GKPSS SFWRDNCLGKFA
Sbjct: 61  ENLSIPDLARSSCVSRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQV DIKRLNNM+SDHGIYSRERLLIPIGNPNILINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMISDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY 240
           EMDAIAKREVAVLYLDGIP THHLYGK TCE+GMSSVQVNK+VLH LSRSMMVDDETA+Y
Sbjct: 181 EMDAIAKREVAVLYLDGIPITHHLYGKETCERGMSSVQVNKRVLHLLSRSMMVDDETAQY 240

Query: 241 YLSISHGDPRAALTEFAEDIRWERHMSIA 269
           YLSIS+GDPRAALTEFAEDIRWERH+SIA
Sbjct: 241 YLSISNGDPRAALTEFAEDIRWERHLSIA 269

[Close]

BLAST of MC08g2258 vs. ExPASy TrEMBL
Match: A0A6J1D9A3 (F-box protein At1g55000 OS=Momordica charantia OX=3673 GN=LOC111018786 PE=4 SV=1)

HSP 1 Score: 546 bits (1408), Expect = 1.47e-196
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF 60

Query: 61  EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA 120
           EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA
Sbjct: 61  EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY 240
           EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY
Sbjct: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY 240

Query: 241 YLSISHGDPRAALTEFAEDIRWERHMSIA 269
           YLSISHGDPRAALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISHGDPRAALTEFAEDIRWERHMSIA 269

[Close]

BLAST of MC08g2258 vs. ExPASy TrEMBL
Match: A0A0A0LFS6 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022840 PE=4 SV=1)

HSP 1 Score: 495 bits (1275), Expect = 2.77e-176
Identity = 243/269 (90.33%), Postives = 254/269 (94.42%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCCDQDDDVEILRHLNP+ A+HSP   PP AD S A+LSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIF 60

Query: 61  EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA 120
           E LSIPDLARSSCVCRLW SVASD EIV+GAFKAPWK+KDV+GKPSS SFWRDNCLGKFA
Sbjct: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPN+LINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY 240
           EMDAIAKREVAVLYLDGIP T HLYGKVT EQGMSSVQVNK+VLHSLSRSMMVDDETA+Y
Sbjct: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240

Query: 241 YLSISHGDPRAALTEFAEDIRWERHMSIA 269
           YLSIS+G+PRAALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISNGNPRAALTEFAEDIRWERHMSIA 269

[Close]

BLAST of MC08g2258 vs. ExPASy TrEMBL
Match: A0A6J1FH66 (F-box protein At1g55000 OS=Cucurbita moschata OX=3662 GN=LOC111443952 PE=4 SV=1)

HSP 1 Score: 483 bits (1242), Expect = 3.07e-171
Identity = 241/270 (89.26%), Postives = 251/270 (92.96%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEA-DSSTAVLSPMNSHFFALSCRDILRLI 60
           MGCCCD+DDDVEILRHL+P+  V SP    P   DSSTAVLSPMNSHFFALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPDSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKF 120
           FEKLSIPDLARSSCV RLW SVASD EIV+GAFKAPWK+KDVIGKPSSGSFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180
           AISHRILRGDSLASLAVKYSVQV+DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETAR 240
           IEMDAIAKREVA LYLDGIPTTHHLYGK T +QGMSSVQV K+VLHSLSRSMMVDDETA+
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETNDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISHGDPRAALTEFAEDIRWERHMSIA 269
           YYLSIS GDPRAALTEFAEDIRWERHM +A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of MC08g2258 vs. ExPASy TrEMBL
Match: A0A6J1HS58 (F-box protein At1g55000 OS=Cucurbita maxima OX=3661 GN=LOC111465634 PE=4 SV=1)

HSP 1 Score: 479 bits (1233), Expect = 7.22e-170
Identity = 239/270 (88.52%), Postives = 250/270 (92.59%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEAD-SSTAVLSPMNSHFFALSCRDILRLI 60
           MGCCCD+DDDVEILRHL+P+  V SP    P    SSTAVLSPMNSHFFALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPGSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKF 120
           FEKLSIPDLARSSCV RLW SVASD EIV+GAFKAPWK+KDVIGKPSSGSFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180
           AISHRILRGDSLASLAVKYSVQV+DIKRLNNMMSDHGIYSRER+LIPIGNPNILINSICY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERMLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETAR 240
           IEMDAIAKREVA LYLDGIPTTHHLYGK T +QGMSSVQV K+VLHSLSRSMMVDDETA+
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETDDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISHGDPRAALTEFAEDIRWERHMSIA 269
           YYLSIS GDPRAALTEFAEDIRWERHM +A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of MC08g2258 vs. ExPASy TrEMBL
Match: A0A1S3BZK8 (Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103494917 PE=3 SV=1)

HSP 1 Score: 405 bits (1041), Expect = 8.93e-131
Identity = 199/218 (91.28%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCCDQDDDVEILRHLNP+  VHSP   PP AD STA+LSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPPVHSPPLQPPPADHSTAILSPMNSHFFALSCRDILRLIF 60

Query: 61  EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA 120
           E LSIPDLARSSCVCRLW SVASD EIVAGAFKAPWK+KDV+GKPSS SFWRDNCLGKFA
Sbjct: 61  EHLSIPDLARSSCVCRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQ 218
           EMDAIAKREVAVLYLDGIP T HLYGKVT EQGMSSVQ
Sbjct: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQ 218

[Close]

BLAST of MC08g2258 vs. TAIR 10
Match: AT1G55000.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 282.0 bits (720), Expect = 5.2e-76
Identity = 134/220 (60.91%), Postives = 172/220 (78.18%), Query Frame = 0


Query: 49  ALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSG 108
           AL CRD L +IF+KL++ DLAR+SCVC++W SVA++ ++V  AF APW++K+++G+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 109 SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIG 168
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQVMDIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 169 NPNILINSICYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLS 228
           NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    ++++ SL 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 229 RSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSI 269
           RSM VDD TA YYL+I+ GDPR+AL+EF+ D+RWER   +
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of MC08g2258 vs. TAIR 10
Match: AT1G55000.2 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 282.0 bits (720), Expect = 5.2e-76
Identity = 134/220 (60.91%), Postives = 172/220 (78.18%), Query Frame = 0


Query: 49  ALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSG 108
           AL CRD L +IF+KL++ DLAR+SCVC++W SVA++ ++V  AF APW++K+++G+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 109 SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIG 168
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQVMDIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 169 NPNILINSICYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLS 228
           NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    ++++ SL 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 229 RSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSI 269
           RSM VDD TA YYL+I+ GDPR+AL+EF+ D+RWER   +
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of MC08g2258 vs. TAIR 10
Match: AT1G55000.3 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 282.0 bits (720), Expect = 5.2e-76
Identity = 134/220 (60.91%), Postives = 172/220 (78.18%), Query Frame = 0


Query: 49  ALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSG 108
           AL CRD L +IF+KL++ DLAR+SCVC++W SVA++ ++V  AF APW++K+++G+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 109 SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIG 168
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQVMDIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 169 NPNILINSICYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLS 228
           NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    ++++ SL 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 229 RSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSI 269
           RSM VDD TA YYL+I+ GDPR+AL+EF+ D+RWER   +
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of MC08g2258 vs. TAIR 10
Match: AT5G08200.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 52.0 bits (123), Expect = 8.7e-07
Identity = 26/65 (40.00%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 105 PSSGS--FWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRER 164
           PSS S  F   N   +  I HRI + D+LA +A+KY V+V D+K++NN+++D  +++ + 
Sbjct: 60  PSSSSPPFHGSNSPDRGYIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFALKS 119

Query: 165 LLIPI 168
           L IP+
Sbjct: 120 LQIPL 124

[Close]

BLAST of MC08g2258 vs. TAIR 10
Match: AT5G23130.1 (Peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 48.5 bits (114), Expect = 9.6e-06
Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 0


Query: 105 PSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLL 164
           PSS S     C G   I HR+ + D+LA +A+KY V+V DI +LN +++D  +++ E L 
Sbjct: 60  PSSAS----TCAG--YIEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESLR 116

Query: 165 IPI 168
           IP+
Sbjct: 120 IPL 116

The following BLAST results are available for this feature:

BLAST of MC08g2258 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ32	7.3e-75	60.91	F-box protein At1g55000 OS=Arabidopsis thaliana OX=3702 GN=At1g55000 PE=1 SV=1	[more]
Q5HZA4	6.7e-04	32.95	LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Rattus no...	[more]

BLAST of MC08g2258 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150720.1	3.03e-196	100.00	F-box protein At1g55000 [Momordica charantia]	[more]
XP_004139174.1	5.71e-176	90.33	F-box protein At1g55000 [Cucumis sativus] >KGN60915.1 hypothetical protein Csa_0...	[more]
XP_022937590.1	6.34e-171	89.26	F-box protein At1g55000 [Cucurbita moschata]	[more]
KAG6586259.1	1.82e-170	88.89	F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021103.1 F-b...	[more]
XP_038877035.1	2.49e-170	88.48	F-box protein At1g55000 [Benincasa hispida]	[more]

BLAST of MC08g2258 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9A3	1.47e-196	100.00	F-box protein At1g55000 OS=Momordica charantia OX=3673 GN=LOC111018786 PE=4 SV=1	[more]
A0A0A0LFS6	2.77e-176	90.33	LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022840 PE=4 S...	[more]
A0A6J1FH66	3.07e-171	89.26	F-box protein At1g55000 OS=Cucurbita moschata OX=3662 GN=LOC111443952 PE=4 SV=1	[more]
A0A6J1HS58	7.22e-170	88.52	F-box protein At1g55000 OS=Cucurbita maxima OX=3661 GN=LOC111465634 PE=4 SV=1	[more]
A0A1S3BZK8	8.93e-131	91.28	Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103494917 PE=3 SV=1	[more]

BLAST of MC08g2258 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55000.1	5.2e-76	60.91	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.2	5.2e-76	60.91	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.3	5.2e-76	60.91	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G08200.1	8.7e-07	40.00	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G23130.1	9.6e-06	41.27	Peptidoglycan-binding LysM domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 51..91 e-value: 0.0078 score: 25.4
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 53..85 e-value: 4.9E-6 score: 26.2
IPR018392	LysM domain	SMART	SM00257	LysM_2	coord: 122..166 e-value: 2.8E-4 score: 30.2
IPR018392	LysM domain	PFAM	PF01476	LysM	coord: 124..166 e-value: 8.9E-7 score: 28.9
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 121..165 score: 11.697074
IPR018392	LysM domain	CDD	cd00118	LysM	coord: 121..165 e-value: 1.28391E-7 score: 45.1689
IPR036779	LysM domain superfamily	GENE3D	3.10.350.10	LysM domain	coord: 117..171 e-value: 4.9E-13 score: 50.4
IPR036779	LysM domain superfamily	SUPERFAMILY	54106	LysM domain	coord: 122..166
None	No IPR available	GENE3D	1.20.1280.50		coord: 52..87 e-value: 6.5E-8 score: 34.3
None	No IPR available	PANTHER	PTHR20932:SF8	LD22649P	coord: 1..268
IPR045030	LysM and putative peptidoglycan-binding domain-containing protein 1-4	PANTHER	PTHR20932	LOC443603 PROTEIN-RELATED	coord: 1..268
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 54..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g2258.1	MC08g2258.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0031408	oxylipin biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function	GO:0005515	protein binding