MC08g2215 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g2215
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Pre-mRNA-splicing factor 38
Location	MC08: 30945172 .. 30949334 (+)
RNA-Seq Expression	MC08g2215
Synteny	MC08g2215

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTTCCCAATTGGCCGATTTTCTCCCTCTCTCGGTCTCTGGTTTCTATTCATCTGACAATTAGGGTTTTGATCATTCTCCTCTGTCGATTTATCTGGAACCATACGCATTTCGCTGTTCTATAGCCGGTGGTTATGGCTAATCGAACAGACCCAGCTGCGAAGAGCATAAGGGGAACGAACCCGCAGAATCTGGTGGAGAAGATTCTTCGCTCGAAGATCTACCAGAACACTTACTGGAAGGAGCAATGTTTTGGTTTGACTGCGGAGACATTAGTGGACAAGGCCATGGAGCTCGACCACCTCGGCGGTACATTTGGTGGCAACCGCAAGCCCACGCCTTTCATGTGTCTCGTCATGAAGATGCTTCAGATTCAGCCGGAGAAGGAAATCGTTATCGAGTTCATCAAGAACGAGGATTACAAGTAATTTTTTTATTGTCATTTAAGCTCCCATTAAGCAGAACTTTGCATTTGGCTCCCTAGAAAAGTTGAGGAGTAGGGTTCATTGGAGAGTGAAATATTTGTGGTTTTGATGTTTCAATTGTTTGTTTTAGGGATTGAGGGAAAGAAACCATGATTAAGGGAACTTACTGCGAACCTTGCGAATGAAAAGTAATCGTTGGTCAAAAAGTTTTTGCAGTTGATAAATGAATCGGAAGTTAGGGATAGTGAATGATCAGCATGAGAAATGGACGGTTAGGTCTTATCGTTGAGCTAAAACAAATACGGAAAGGGGTTCTGTATCTTATGGTGTACTATGGTTCTTAAAGGTTGTTATTTATCGCCTTGATTTCCAATTACTGGTTTTATAATGTATGGTCTTGAAAATGAGTTGTCTGCTTGGATCTAAATCTCATCTGTCAGTTCATATCTATTTAGTTTTGTGAAAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTGATAATGGTAGGTTGGCTTTCTAGACTCTTTCAAGCATTCTTCTGAAGTTACCTTTTTGCATTGGTCTTAGATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGTCTCACTGGGACTGATGTTGATGTGTATCGTTACCTGGAGCCTTTGTACAATGACTATCGGAAATTGAGGAGAAAATTAGCCGATGGATGTAAGATTCAGGGCCTCTCCTTGAATTTTTATATATTAAATTATTTGTGAAAATTAGTTGATTTTACTTTCTTGTTGCATTAATGTATTACTAGCTATGAACTTGATCTTATTTTTACCAGGTTTTTCTTTAACACATGTGGATGAAGTCATTGATGAACTTCTTACTAAAGATTATTCATGCGACATTGCTATGCCACGTGTCAAAAAGAGGTATGGTATTGATAACTTAAGTGGCTATTTTCCAGTCAATTTATTTTTCAAGCGGAAGTTGATAATGTTTTATTGAAATCTGGGCTTTTGGAGAAATATGTATTATTCATCGTTTGACAAACAGAAGTACATGGGCCACAAGCTCTATATATCTACTGTTCTGTTTATTTCACTCTCTTTATGTGTCAATAGTGTTCAATTTTGAATGGATAGACTTCCAACCTTCTTCAATGGCTTAGTTTTCTCTGCTTCTAATGGATTCTCGTTCTTTTCTCTGTTTCAACCCCTGAATTTTGAGTGCTGTACTGATTCTGAAGTTACATAAGATACACTTTGTACTTTGTGATGACAGATGGACCCTTGAATCTACTGGTTTACTGCCTGCAAGGAAAAGTGCTCTAGAAGATGACTTTGAGGAGGAGGAAGAGAAAGAGGATGCTGAGGCACTTAACGACTTAGAAGATGAGATTCACGAGAAGGTTTTAAATGCATTTTCTATTTGTGTTTGTCAGTGAGTATCCAGTATGTATTTTCTTCTCCTTGTTAACCGTTTTGAGATTGTGCATCTGCAGAATCATTACCGAGGGAGAAGTCCTGGGCGGGAGAGAGATAGAGATAGAAGGCGTGATAGTCACAGACACAGGTCCAATCCCCTCTTCTCTGCCTTTTTGTTTTCTTCTCCCTCCCTCCCCCTCTCGATTTTATGGATGCAACTATGATCCTATTGGTGAATTTGTGAATATTTGTTCTTGTAGAGAGACATCAATTGAAATCTCGAGTCTATTAGCTGTCTTCATTCGTAGTTAAACTTTTCATTGAACACAAATAATAATGTCCAAGATCGAAATAAATAATTTTGAACTTTTCCTTTTGTGGTCTCTTAGTACAGTTGGTGTAAGCCGACAGTTGAAAATTAGATTAAAAAAATTTAGAAGATGAATGGGAGAATGGAAGTTGGGGCTTGGCTATCCATGCTATTGCCTATCTTGGAATTGAATTTATTGGGTTCCTAGATGTTTTCCTTTTTGACTAGCTTGTTAGGTCCAGCGAGTGCTAAGTTGATTTTTGTTTTTGACTGCCAAAAGAGAAACTCCTGTGAGAACAATAGAGATCTTTTACGTTCCTGAAATGATATCTTTATGCCATTGTATTAAAATGGATCTTTGCTTGATCTGGCTCTTTGTAGACTTATTTTGATGTATTCTTCTATGGAGAAACTGAGTTTTATTTATCTACTTAGTTGGAAGCAGTTGGAACCTGTTATTCCTGGAATCCTTTCCATACTAGTCAATGAACATTCATATGTTTTCTGTCACTACCATGGCATTTCAAGCCATTGGTTGATGGCTGCTTCCTAAAATAAATTCTTACGATCCTGCCAGGTTTCTCTGTACTGACAGTGTGCAGCTGAGAAGTATGATGGATCGTACATATATTAGTCATAGTGATTACATTTTCCAATTTAATTATTGTATTGCATTCAATGATTATTTTGGTGACTACAGGTTTTCATATTTGTTAATTGTTTGTAACTGCTACTGTAAATGTGCCACTTGTAGGATACTGTTAATTAGAATTTTTGCTCTTTGAGACTAGATATTTATATGAGTGAGAAATGACAATGAAATAGCAAGAGTTGTTGATCTGACCTGAAATTTTTTTTCTATCTATTTTTAGCTTTATGACGAAAAGGCTAATTCGATTGTATTTACAAGATGATCAAGTTTGTTTTTAGTTCTTCCAATAATTTCATCTTTTCCAGTGATGGAATTACCTGTTTGTGCATTCGGTAGAAGATATTTTCTTCATATTCTTTTGATCCCGAAAACCTATAACCTTGTATAGAATTCATTATTCAGTTGTTGCATTGATAAGTTGTCTTACTACGTTCCATTGAGAGCGAACAATTTTAATTTTCTGACCCCACGTTTTTGTTGTTGTTTAATCTTAGGGACCGAGATTATGATAGAGACCGAGATTATGACAGAGACTATGATAGAGATCGTGGACGTGGACGTGAAAGAGATAGAGATCGAGAAAGGGATAGGGATAGGGATAGGGAGAGGGATAGAGATCGAGATAGGGATAGGGATAGAGATAGAGACCGGGACCGGGATAGAGAGAGAGATAGGGATAGGGATAGGGATCGCTATCGCCTAAGGGATGAGAAGGAATATGGTAGAGATCGAGAGAGGGAAAGGGAAGGCAGGGAGCGGGATAGGAGAGACAGAGATCGAGATCGTGGTAGGAGGAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAGGATCGGGAGGATGGGGAGCACCGCAAGAGACATGCCCGCAGTAGTGCTAGTCCTAGAAGAAGGGATGGAGCGGAGGATATAGACGAGCCGAAGAGGAAGAAAGAAAAGAAGGAGAAGGAGAAGGAGAAGAAAGAAAATGGGGCAGGTGTGGCGGAGGATCCAGAGATTGCAGAATGGAACAGGATTCGGGCTTCTCTTGGAATGGCACCTCTGAAGTAAGATGACTAGTTTTCCATTCTTCAGTTGCTTCATGATGTATCTGTGAGTAAATTCTGTTGCACGAGTAAAAGAGCTTATGCTGATTTCTGTATTATATTTGGTGCAATTACAATCTTTGTTGGGATAACACTGGAAATGTTGCACTACAGCTGATCTCAGCCCTCTTCTTCTATGCCTAACTATACTTCAATTACAACTTTAGTTCATGTAATTTTAGTTCATGTAATTTCAAGATTGTCCCGGATTAATAGGTCATCAAACCCTCAGTTTTGTGTATAATAGTTTCTTAAATTATAATTT

mRNA sequence

ATGGAATTTCCCAATTGGCCGATTTTCTCCCTCTCTCGGTCTCTGGTTTCTATTCATCTGACAATTAGGGTTTTGATCATTCTCCTCTGTCGATTTATCTGGAACCATACGCATTTCGCTGTTCTATAGCCGGTGGTTATGGCTAATCGAACAGACCCAGCTGCGAAGAGCATAAGGGGAACGAACCCGCAGAATCTGGTGGAGAAGATTCTTCGCTCGAAGATCTACCAGAACACTTACTGGAAGGAGCAATGTTTTGGTTTGACTGCGGAGACATTAGTGGACAAGGCCATGGAGCTCGACCACCTCGGCGGTACATTTGGTGGCAACCGCAAGCCCACGCCTTTCATGTGTCTCGTCATGAAGATGCTTCAGATTCAGCCGGAGAAGGAAATCGTTATCGAGTTCATCAAGAACGAGGATTACAAATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGTCTCACTGGGACTGATGTTGATGTGTATCGTTACCTGGAGCCTTTGTACAATGACTATCGGAAATTGAGGAGAAAATTAGCCGATGGATGTTTTTCTTTAACACATGTGGATGAAGTCATTGATGAACTTCTTACTAAAGATTATTCATGCGACATTGCTATGCCACGTGTCAAAAAGAGATGGACCCTTGAATCTACTGGTTTACTGCCTGCAAGGAAAAGTGCTCTAGAAGATGACTTTGAGGAGGAGGAAGAGAAAGAGGATGCTGAGGCACTTAACGACTTAGAAGATGAGATTCACGAGAAGAATCATTACCGAGGGAGAAGTCCTGGGCGGGAGAGAGATAGAGATAGAAGGCGTGATAGTCACAGACACAGGGACCGAGATTATGATAGAGACCGAGATTATGACAGAGACTATGATAGAGATCGTGGACGTGGACGTGAAAGAGATAGAGATCGAGAAAGGGATAGGGATAGGGATAGGGAGAGGGATAGAGATCGAGATAGGGATAGGGATAGAGATAGAGACCGGGACCGGGATAGAGAGAGAGATAGGGATAGGGATAGGGATCGCTATCGCCTAAGGGATGAGAAGGAATATGGTAGAGATCGAGAGAGGGAAAGGGAAGGCAGGGAGCGGGATAGGAGAGACAGAGATCGAGATCGTGGTAGGAGGAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAGGATCGGGAGGATGGGGAGCACCGCAAGAGACATGCCCGCAGTAGTGCTAGTCCTAGAAGAAGGGATGGAGCGGAGGATATAGACGAGCCGAAGAGGAAGAAAGAAAAGAAGGAGAAGGAGAAGGAGAAGAAAGAAAATGGGGCAGGTGTGGCGGAGGATCCAGAGATTGCAGAATGGAACAGGATTCGGGCTTCTCTTGGAATGGCACCTCTGAAGTAAGATGACTAGTTTTCCATTCTTCAGTTGCTTCATGATGTATCTGTGAGTAAATTCTGTTGCACGAGTAAAAGAGCTTATGCTGATTTCTGTATTATATTTGGTGCAATTACAATCTTTGTTGGGATAACACTGGAAATGTTGCACTACAGCTGATCTCAGCCCTCTTCTTCTATGCCTAACTATACTTCAATTACAACTTTAGTTCATGTAATTTTAGTTCATGTAATTTCAAGATTGTCCCGGATTAATAGGTCATCAAACCCTCAGTTTTGTGTATAATAGTTTCTTAAATTATAATTT

Coding sequence (CDS)

ATGGCTAATCGAACAGACCCAGCTGCGAAGAGCATAAGGGGAACGAACCCGCAGAATCTGGTGGAGAAGATTCTTCGCTCGAAGATCTACCAGAACACTTACTGGAAGGAGCAATGTTTTGGTTTGACTGCGGAGACATTAGTGGACAAGGCCATGGAGCTCGACCACCTCGGCGGTACATTTGGTGGCAACCGCAAGCCCACGCCTTTCATGTGTCTCGTCATGAAGATGCTTCAGATTCAGCCGGAGAAGGAAATCGTTATCGAGTTCATCAAGAACGAGGATTACAAATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGTCTCACTGGGACTGATGTTGATGTGTATCGTTACCTGGAGCCTTTGTACAATGACTATCGGAAATTGAGGAGAAAATTAGCCGATGGATGTTTTTCTTTAACACATGTGGATGAAGTCATTGATGAACTTCTTACTAAAGATTATTCATGCGACATTGCTATGCCACGTGTCAAAAAGAGATGGACCCTTGAATCTACTGGTTTACTGCCTGCAAGGAAAAGTGCTCTAGAAGATGACTTTGAGGAGGAGGAAGAGAAAGAGGATGCTGAGGCACTTAACGACTTAGAAGATGAGATTCACGAGAAGAATCATTACCGAGGGAGAAGTCCTGGGCGGGAGAGAGATAGAGATAGAAGGCGTGATAGTCACAGACACAGGGACCGAGATTATGATAGAGACCGAGATTATGACAGAGACTATGATAGAGATCGTGGACGTGGACGTGAAAGAGATAGAGATCGAGAAAGGGATAGGGATAGGGATAGGGAGAGGGATAGAGATCGAGATAGGGATAGGGATAGAGATAGAGACCGGGACCGGGATAGAGAGAGAGATAGGGATAGGGATAGGGATCGCTATCGCCTAAGGGATGAGAAGGAATATGGTAGAGATCGAGAGAGGGAAAGGGAAGGCAGGGAGCGGGATAGGAGAGACAGAGATCGAGATCGTGGTAGGAGGAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAGGATCGGGAGGATGGGGAGCACCGCAAGAGACATGCCCGCAGTAGTGCTAGTCCTAGAAGAAGGGATGGAGCGGAGGATATAGACGAGCCGAAGAGGAAGAAAGAAAAGAAGGAGAAGGAGAAGGAGAAGAAAGAAAATGGGGCAGGTGTGGCGGAGGATCCAGAGATTGCAGAATGGAACAGGATTCGGGCTTCTCTTGGAATGGCACCTCTGAAGTAA

Protein sequence

MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGTFGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPARKSALEDDFEEEEEKEDAEALNDLEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYDRDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRDRYRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARSSASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK

Homology

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BLAST of MC08g2215 vs. ExPASy Swiss-Prot
Match: Q8LB54 (Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana OX=3702 GN=PRP38 PE=1 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 5.5e-122
Identity = 276/418 (66.03%), Postives = 309/418 (73.92%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AK+IRGTNPQNLVEKI+R+KIYQ+T+WKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           FGG+RKPTPF+CL++KMLQIQPEKEIV+EFIKN+DYKYVR+LGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRK+R+KL+DG FSLTHVDEVI+ELLTKDYSCDIAMPR+KKRWTLE  GLL  R
Sbjct: 121 EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR 180

Query: 181 KSALEDDFEEEEEKEDAEALND-LEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYD 240
           KS LEDDFEEEEEKE+ E + D  EDE+ ++     R   RERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSVLEDDFEEEEEKEENEGIADGSEDEMDQRRKSPERE--RERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRD 300
           RD D DRD+DRD       +R+R   RDRDRERDRD  R+RDRDR+R RDRERDR     
Sbjct: 241 RDYDMDRDHDRD------YERERGHGRDRDRERDRDHYRERDRDRERGRDRERDR----- 300

Query: 301 RYRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARS 360
                                        RDR RRRS SRSR           RKRH   
Sbjct: 301 -----------------------------RDRARRRSRSRSRD----------RKRH--- 354

Query: 361 SASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 418
                  D   D +EPK+KKEKKEK KE   +      +PEIAE NR+RASLGM PL+
Sbjct: 361 -----ETDDVRDREEPKKKKEKKEKMKEDGTD----HPNPEIAEMNRLRASLGMKPLR 354

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BLAST of MC08g2215 vs. ExPASy Swiss-Prot
Match: Q7JVL3 (Pre-mRNA-splicing factor 38 OS=Drosophila melanogaster OX=7227 GN=Prp38 PE=1 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 7.3e-66
Identity = 174/331 (52.57%), Postives = 224/331 (67.67%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   AK++ GTNPQ L+EKI+RS+IY + YWKEQCF LTAE LVDKAMEL  +GG 
Sbjct: 1   MANRTVKEAKNVHGTNPQYLIEKIIRSRIYDSKYWKEQCFALTAELLVDKAMELRFVGGV 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGN KPT F+CL +KMLQIQPEK+IV+EFIKNE++KYVR LGAFYLRLTG  +D Y+YL
Sbjct: 61  YGGNIKPTQFLCLTLKMLQIQPEKDIVVEFIKNEEFKYVRALGAFYLRLTGAALDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLY D RKLRR+   G F + ++DE IDELL  D  CDI +PR++KR  LE    +  +
Sbjct: 121 EPLYIDNRKLRRQNRAGQFEIVYMDEYIDELLRNDRVCDIILPRIQKRSILEENNEIEPK 180

Query: 181 KSALEDDFEEE--EEKEDAEALNDLEDE---IHEKNHYRGRSPGRERDRDRRR---DSHR 240
            S L++D ++E   ++E A+  N  ++    +      R +S  R R+R+RR    +S R
Sbjct: 181 VSVLDEDLDDELPSDEEKADETNRPKENSTAVRRPRRVRSKSRSRSRERERRSGQGNSAR 240

Query: 241 HRD-----RDYDRDRD-------YDRDYDRDRGRGRERDRDRER-DRDRDRERDRDRDRD 300
            RD      DYDR R+       ++ DYDR +  GR  DR+RER DRD  RER+RD DRD
Sbjct: 241 SRDYYDELEDYDRQRNRVRNRDTHNEDYDRRQNNGR-HDRERERQDRDSIRERERDGDRD 300

Query: 301 -RDRDRDRDRDRERDRDRDRDRYRLRDEKEY 310
            RDR+R+R+RDR R   R+RD    RD + Y
Sbjct: 301 RRDRERERERDRGRHDQRERDSRGERDRRRY 330

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BLAST of MC08g2215 vs. ExPASy Swiss-Prot
Match: Q4FZQ6 (Pre-mRNA-splicing factor 38A OS=Xenopus laevis OX=8355 GN=prpf38a PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.5e-58
Identity = 159/334 (47.60%), Postives = 212/334 (63.47%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A S+ GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSVHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR LGA Y+RLTGT  D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRALGALYMRLTGTATDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRK++ +  DG F L HVDE ID+LL ++  CD+ +PR++KR+ LE T  L  R
Sbjct: 121 EPLYNDYRKVKVQNRDGEFELMHVDEFIDQLLHEERVCDVILPRLQKRFVLEETEQLDPR 180

Query: 181 KSALEDDFEE----EEEKEDAEALNDLEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDR 240
            SALE+D ++    EEE++D E   D   E H +N+       R+ DR RR  S R+R  
Sbjct: 181 VSALEEDMDDVESSEEEEDDDEKGRDPSPEHHRRNY-------RDLDRPRRSPSPRYR-- 240

Query: 241 DYDRDRDYDRDYDRDRGRG-RERDRDRERDRDRDRERDRDRDRDRDRDRDRDRD-RERDR 300
                        R R R  R R R  +R       R+R R +   R R R R+ R R +
Sbjct: 241 -------------RSRSRSPRRRSRSPKRRSPSPPRRERHRSKSPRRHRSRSRERRHRSK 300

Query: 301 DRDRDRYRLRDEKEYGRDREREREGRERDRRDRD 329
            +    +R    + + +  ER ++  ++ RR  +
Sbjct: 301 SKSPGHHRSHRHRSHSKSPERSKKSHKKSRRGNE 312

[Close]

BLAST of MC08g2215 vs. ExPASy Swiss-Prot
Match: Q0P5I6 (Pre-mRNA-splicing factor 38A OS=Bos taurus OX=9913 GN=PRPF38A PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.9e-58
Identity = 158/332 (47.59%), Postives = 209/332 (62.95%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRK++ +  +G F L HVDE IDELL  +  CDI +PR++KR+ LE    L  R
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEE----EEEKEDAEALNDLEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDR 240
            SALE+D ++    EEE+E+ E L  +    H +  Y      R+ D+ RR  + R+R  
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSY------RDLDKPRRSPTLRYR-- 240

Query: 241 DYDRDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDR 300
                        R R   R     + R     RER R +   R R R RDR R R R +
Sbjct: 241 -----------RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDR-RHRSRSK 300

Query: 301 DRDRYRLRDEKEYGRDREREREGRERDRRDRD 329
               +R    + + +  ER ++  ++ RR  +
Sbjct: 301 SPGHHRSHRHRSHSKSPERSKKSHKKSRRGNE 312

[Close]

BLAST of MC08g2215 vs. ExPASy Swiss-Prot
Match: Q8NAV1 (Pre-mRNA-splicing factor 38A OS=Homo sapiens OX=9606 GN=PRPF38A PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.9e-58
Identity = 158/332 (47.59%), Postives = 209/332 (62.95%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRK++ +  +G F L HVDE IDELL  +  CDI +PR++KR+ LE    L  R
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEE----EEEKEDAEALNDLEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDR 240
            SALE+D ++    EEE+E+ E L  +    H +  Y      R+ D+ RR  + R+R  
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSY------RDLDKPRRSPTLRYR-- 240

Query: 241 DYDRDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDR 300
                        R R   R     + R     RER R +   R R R RDR R R R +
Sbjct: 241 -----------RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDR-RHRSRSK 300

Query: 301 DRDRYRLRDEKEYGRDREREREGRERDRRDRD 329
               +R    + + +  ER ++  ++ RR  +
Sbjct: 301 SPGHHRSHRHRSHSKSPERSKKSHKKSRRGNE 312

[Close]

BLAST of MC08g2215 vs. NCBI nr
Match: XP_022156427.1 (pre-mRNA-splicing factor 38 [Momordica charantia])

HSP 1 Score: 744 bits (1920), Expect = 2.72e-269
Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180

Query: 181 KSALEDDFEEEEEKEDAEALNDLEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYDR 240
           KSALEDDFEEEEEKEDAEALNDLEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYDR
Sbjct: 181 KSALEDDFEEEEEKEDAEALNDLEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYDR 240

Query: 241 DRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRDR 300
           DRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRDR
Sbjct: 241 DRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRDR 300

Query: 301 YRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARSS 360
           YRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARSS
Sbjct: 301 YRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARSS 360

Query: 361 ASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417
           ASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK
Sbjct: 361 ASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417

[Close]

BLAST of MC08g2215 vs. NCBI nr
Match: XP_031737285.1 (pre-mRNA-splicing factor 38 [Cucumis sativus] >KAE8651621.1 hypothetical protein Csa_021262 [Cucumis sativus])

HSP 1 Score: 663 bits (1710), Expect = 1.81e-237
Identity = 382/418 (91.39%), Postives = 397/418 (94.98%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRKLRRKLADGCFSL+HVDEVIDELLTKDYSCD+A+PRVKKRWTLES G LP R
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180

Query: 181 KSALEDDFEEEEEKEDAEALND-LEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+AE +ND LED+IHEKN+YRGRSP RERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRD 300
           RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDR    DRDRD
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDR----DRDRD 300

Query: 301 RYRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARS 360
           RYRLRDEKEYGRDR+REREGRER+RRDRDR  GRRRSHSRSRSRSKDREDGE+RKRH+RS
Sbjct: 301 RYRLRDEKEYGRDRDREREGRERERRDRDR--GRRRSHSRSRSRSKDREDGEYRKRHSRS 360

Query: 361 SASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417
           S SPRRRDGAED +EPK+KKEKKEK    KE GAG  EDPEIAEWNRIRASLG+APLK
Sbjct: 361 SVSPRRRDGAEDREEPKKKKEKKEK----KEGGAGE-EDPEIAEWNRIRASLGLAPLK 407

[Close]

BLAST of MC08g2215 vs. NCBI nr
Match: XP_038890973.1 (pre-mRNA-splicing factor 38 [Benincasa hispida])

HSP 1 Score: 654 bits (1686), Expect = 7.03e-234
Identity = 375/418 (89.71%), Postives = 395/418 (94.50%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRKLRRKLADGCF+L+HVDEVIDELLTKDYSCDIA+PRVKKRWTLES+G LPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFALSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDAEALND-LEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+AE +ND LED+IHEKN+YRGRSP RERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRD 300
           RDRDYDRDYDRDRGRGRERDRDRERDRDRDR        DRDRDRDRDRDR+RDRDRDRD
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDR--------DRDRDRDRDRDRDRDRDRDRD 300

Query: 301 RYRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARS 360
           R+RLRDEKEYGRDR+REREGRER+RRDRDR  GRRRSHS+SRSRSKDREDGE+RKRH+RS
Sbjct: 301 RHRLRDEKEYGRDRDREREGRERERRDRDR--GRRRSHSKSRSRSKDREDGEYRKRHSRS 360

Query: 361 SASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417
           S SPRRRDGAED +EP++KKEKKEK    KE GAG  EDPEIAEWNRIRASLG+APLK
Sbjct: 361 SVSPRRRDGAEDREEPRKKKEKKEK----KEAGAGE-EDPEIAEWNRIRASLGLAPLK 403

[Close]

BLAST of MC08g2215 vs. NCBI nr
Match: KAG6586235.1 (Pre-mRNA-splicing factor 38, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 650 bits (1676), Expect = 2.17e-232
Identity = 373/418 (89.23%), Postives = 385/418 (92.11%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
            GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRKLRR+LADGCFSLTHVDEVIDELLTKDYSCDIA+PRVKKRW LESTG LPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDAEALND-LEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKED E +ND LEDEIHEKN+YRGRSP RERD+DRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRD 300
           RDRDYDRDYDRDRGRGRERDRDR+RDRDRDR            DRDRDR R+RDRDRDRD
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDR------------DRDRDRGRDRDRDRDRD 300

Query: 301 RYRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARS 360
           RYRLRD+KEY RDR+REREGRER+RRDRD   GRRRSHSRSRSRSKDREDGE+RKRHARS
Sbjct: 301 RYRLRDDKEYSRDRDREREGRERERRDRDHH-GRRRSHSRSRSRSKDREDGEYRKRHARS 360

Query: 361 SASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417
           SASPRRRDGAED DEPKRKKEKKEK    KE GA   EDPEIAEWNRIRASLG+APLK
Sbjct: 361 SASPRRRDGAEDRDEPKRKKEKKEK----KEGGAAGEEDPEIAEWNRIRASLGLAPLK 401

[Close]

BLAST of MC08g2215 vs. NCBI nr
Match: KAG7021069.1 (Pre-mRNA-splicing factor 38 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 647 bits (1668), Expect = 3.59e-231
Identity = 372/418 (89.00%), Postives = 384/418 (91.87%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
            GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRKLRR+LADGCFSLTHVDEVIDELLTKDYSCDIA+PRVKKRW LESTG LPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDAEALND-LEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKED E +ND LEDEIHEKN+YRGRSP RERD+DRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRD 300
           RDRDYDRDYDRD GRGRERDRDR+RDRDRDR            DRDRDR R+RDRDRDRD
Sbjct: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDR------------DRDRDRGRDRDRDRDRD 300

Query: 301 RYRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARS 360
           RYRLRD+KEY RDR+REREGRER+RRDRD   GRRRSHSRSRSRSKDREDGE+RKRHARS
Sbjct: 301 RYRLRDDKEYSRDRDREREGRERERRDRDHH-GRRRSHSRSRSRSKDREDGEYRKRHARS 360

Query: 361 SASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417
           SASPRRRDGAED DEPKRKKEKKEK    KE GA   EDPEIAEWNRIRASLG+APLK
Sbjct: 361 SASPRRRDGAEDRDEPKRKKEKKEK----KEGGAAGEEDPEIAEWNRIRASLGLAPLK 401

[Close]

BLAST of MC08g2215 vs. ExPASy TrEMBL
Match: A0A6J1DS16 (Pre-mRNA-splicing factor 38 OS=Momordica charantia OX=3673 GN=LOC111023319 PE=3 SV=1)

HSP 1 Score: 744 bits (1920), Expect = 1.32e-269
Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180

Query: 181 KSALEDDFEEEEEKEDAEALNDLEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYDR 240
           KSALEDDFEEEEEKEDAEALNDLEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYDR
Sbjct: 181 KSALEDDFEEEEEKEDAEALNDLEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYDR 240

Query: 241 DRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRDR 300
           DRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRDR
Sbjct: 241 DRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRDR 300

Query: 301 YRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARSS 360
           YRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARSS
Sbjct: 301 YRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARSS 360

Query: 361 ASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417
           ASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK
Sbjct: 361 ASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417

[Close]

BLAST of MC08g2215 vs. ExPASy TrEMBL
Match: A0A6J1FBK8 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111443943 PE=3 SV=1)

HSP 1 Score: 646 bits (1667), Expect = 2.38e-231
Identity = 373/418 (89.23%), Postives = 385/418 (92.11%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
            GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRKLRR+LADGCFSLTHVDEVIDELLTKDYSCDIA+PRVKKRW LESTG LPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDAEALND-LEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKED E +ND LEDEIHEKN+YRGRSP RERD+DRR DSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRHDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRD 300
           RDRDYDRDYDRDRGRGRERDRDR+RDRDRDR            DRDRDR R+RDRDRDRD
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDR------------DRDRDRGRDRDRDRDRD 300

Query: 301 RYRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARS 360
           RYRLRD+KEY RDR+REREGRER+RRDRD   GRRRSHSRSRSRSKDREDGE+RKRHARS
Sbjct: 301 RYRLRDDKEYSRDRDREREGRERERRDRDHH-GRRRSHSRSRSRSKDREDGEYRKRHARS 360

Query: 361 SASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417
           SASPRRRDGAED DEPKRKKEKKEK    KE GAG  EDPEIAEWNRIRASLG+APLK
Sbjct: 361 SASPRRRDGAEDRDEPKRKKEKKEK----KEGGAGE-EDPEIAEWNRIRASLGLAPLK 400

[Close]

BLAST of MC08g2215 vs. ExPASy TrEMBL
Match: A0A1S3BXB0 (Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103494470 PE=3 SV=1)

HSP 1 Score: 645 bits (1663), Expect = 8.65e-231
Identity = 369/418 (88.28%), Postives = 387/418 (92.58%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRKLRRKL+DGCFSL+HVDEVIDELLTKDYSCDIA+PRVKKRWTLES+G LP R
Sbjct: 121 EPLYNDYRKLRRKLSDGCFSLSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPPR 180

Query: 181 KSALEDDFEEEEEKEDAEALND-LEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+AE +ND LED+IHEKN+YRGRSP RERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRD 300
           RDRDYDRDYDRDRGRGRERDRDRERDRDR+R              DRDRDRER+RDRDRD
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRER--------------DRDRDRERERDRDRD 300

Query: 301 RYRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARS 360
           RYRLRDEKEYGRDR+REREGRER+RRDRDR  GRRRSHSRSRSRSKDREDGE+RKRH+RS
Sbjct: 301 RYRLRDEKEYGRDRDREREGRERERRDRDR--GRRRSHSRSRSRSKDREDGEYRKRHSRS 360

Query: 361 SASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417
           S SPRRRDG ED +EPK+KKEKKEK    KE GAG  EDPEIAEWNRIRASLG+APLK
Sbjct: 361 SVSPRRRDGVEDREEPKKKKEKKEK----KEGGAGE-EDPEIAEWNRIRASLGLAPLK 397

[Close]

BLAST of MC08g2215 vs. ExPASy TrEMBL
Match: A0A6J1HPQ9 (Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111465574 PE=3 SV=1)

HSP 1 Score: 637 bits (1644), Expect = 6.51e-228
Identity = 368/418 (88.04%), Postives = 380/418 (90.91%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
            GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRKLRR+LADGCFSLTHVDEVIDELLTKDYSCDIA+PRVKKRW LESTG LPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDAEALND-LEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKED E +ND LEDEIHEKN+YRGRSP RERD+DRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRD 300
           RDRDYDRDYDRDRGRGRERDRDR+RDRDRD                RDRDR RDRDRDRD
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRD----------------RDRDRGRDRDRDRD 300

Query: 301 RYRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARS 360
           RYRLRD+KEY RDR+ EREGRER+RRDRD   GRRRSHSR+RSRSKDREDGE+RKRHAR 
Sbjct: 301 RYRLRDDKEYSRDRDGEREGRERERRDRDHH-GRRRSHSRNRSRSKDREDGEYRKRHARC 360

Query: 361 SASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417
           SASPRRRDGAED DEPKRKKEKKEK    KE GAG  EDPEIAEWNRIRASLG+APLK
Sbjct: 361 SASPRRRDGAEDRDEPKRKKEKKEK----KEGGAGE-EDPEIAEWNRIRASLGLAPLK 396

[Close]

BLAST of MC08g2215 vs. ExPASy TrEMBL
Match: A0A6J1G4M6 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111450740 PE=3 SV=1)

HSP 1 Score: 637 bits (1644), Expect = 7.27e-228
Identity = 369/420 (87.86%), Postives = 382/420 (90.95%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIA+PRVKKRWTLESTG LPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDAEALND-LEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKED E +ND LED+IHEKN+YRGRSP RERDRDRRRDSHRHRDRDY+
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRD 300
           RDRD DRDYDRDRGRGRERDRDRERDRDRD                RDRDR+RDRDRDRD
Sbjct: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRD----------------RDRDRDRDRDRDRD 300

Query: 301 RYRLRDEKEYGRDREREREGRERDRRD--RDRDRGRRRSHSRSRSRSKDREDGEHRKRHA 360
           RY LRDEKEYGRDR+REREGRER+R    RDRDRGRRRSHSRSRSRSKDREDGE+RKRH 
Sbjct: 301 RYHLRDEKEYGRDRDREREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHT 360

Query: 361 RSSASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417
           RSS SPRRR+GAED +EPKRKKEKKEK    K +GAG  EDPEIAEWNRIRASLGMAPLK
Sbjct: 361 RSSISPRRRNGAEDREEPKRKKEKKEK----KGDGAGE-EDPEIAEWNRIRASLGMAPLK 399

[Close]

BLAST of MC08g2215 vs. TAIR 10
Match: AT2G40650.1 (PRP38 family protein )

HSP 1 Score: 439.1 bits (1128), Expect = 3.9e-123
Identity = 276/418 (66.03%), Postives = 309/418 (73.92%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AK+IRGTNPQNLVEKI+R+KIYQ+T+WKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           FGG+RKPTPF+CL++KMLQIQPEKEIV+EFIKN+DYKYVR+LGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
           EPLYNDYRK+R+KL+DG FSLTHVDEVI+ELLTKDYSCDIAMPR+KKRWTLE  GLL  R
Sbjct: 121 EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR 180

Query: 181 KSALEDDFEEEEEKEDAEALND-LEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYD 240
           KS LEDDFEEEEEKE+ E + D  EDE+ ++     R   RERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSVLEDDFEEEEEKEENEGIADGSEDEMDQRRKSPERE--RERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRD 300
           RD D DRD+DRD       +R+R   RDRDRERDRD  R+RDRDR+R RDRERDR     
Sbjct: 241 RDYDMDRDHDRD------YERERGHGRDRDRERDRDHYRERDRDRERGRDRERDR----- 300

Query: 301 RYRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARS 360
                                        RDR RRRS SRSR           RKRH   
Sbjct: 301 -----------------------------RDRARRRSRSRSRD----------RKRH--- 354

Query: 361 SASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 418
                  D   D +EPK+KKEKKEK KE   +      +PEIAE NR+RASLGM PL+
Sbjct: 361 -----ETDDVRDREEPKKKKEKKEKMKEDGTD----HPNPEIAEMNRLRASLGMKPLR 354

[Close]

BLAST of MC08g2215 vs. TAIR 10
Match: AT1G60900.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 42.7 bits (99), Expect = 8.2e-04
Identity = 82/171 (47.95%), Postives = 104/171 (60.82%), Query Frame = 0


Query: 209 EKNHYRGRSPGRERDRDRRRDSHRHRDRDYDRDRDYDRDYDRDRGRGRERDRDRERDRDR 268
           E + +   S  RE   D ++DS +  ++D +  RD D + DRD    RE+DRDRE+ RDR
Sbjct: 26  ESSPFHEDSKSRE-SHDLKKDSSKISEKDNENGRDKDGNKDRD----REKDRDREKSRDR 85

Query: 269 DRERDRDRDRDRDRDRDRDRDRERDRDRDRDRYRLRDEKEYGRDREREREGRERDR---R 328
           DRE+ RDRDRDR+R +DR RDR   RDR RDR R R EK    D +  R  R+RDR   R
Sbjct: 86  DREKSRDRDRDRERSKDRQRDRHH-RDRHRDRSRERSEKRDDLDDDHHRRSRDRDRRRSR 145

Query: 329 DRDRD-RGRRRSHSRSRSRSKDREDGEHR-------KRHARSSASPRRRDG 369
           DRDR+ R RRRS SRSRSRS+ R   EHR       +  +RS +  +RR G
Sbjct: 146 DRDREVRHRRRSRSRSRSRSERRSRSEHRHKSEHRSRSRSRSRSKSKRRSG 190

The following BLAST results are available for this feature:

BLAST of MC08g2215 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB54	5.5e-122	66.03	Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana OX=3702 GN=PRP38 PE=1 SV=1	[more]
Q7JVL3	7.3e-66	52.57	Pre-mRNA-splicing factor 38 OS=Drosophila melanogaster OX=7227 GN=Prp38 PE=1 SV=...	[more]
Q4FZQ6	1.5e-58	47.60	Pre-mRNA-splicing factor 38A OS=Xenopus laevis OX=8355 GN=prpf38a PE=2 SV=1	[more]
Q0P5I6	1.9e-58	47.59	Pre-mRNA-splicing factor 38A OS=Bos taurus OX=9913 GN=PRPF38A PE=2 SV=1	[more]
Q8NAV1	1.9e-58	47.59	Pre-mRNA-splicing factor 38A OS=Homo sapiens OX=9606 GN=PRPF38A PE=1 SV=1	[more]

BLAST of MC08g2215 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156427.1	2.72e-269	100.00	pre-mRNA-splicing factor 38 [Momordica charantia]	[more]
XP_031737285.1	1.81e-237	91.39	pre-mRNA-splicing factor 38 [Cucumis sativus] >KAE8651621.1 hypothetical protein...	[more]
XP_038890973.1	7.03e-234	89.71	pre-mRNA-splicing factor 38 [Benincasa hispida]	[more]
KAG6586235.1	2.17e-232	89.23	Pre-mRNA-splicing factor 38, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7021069.1	3.59e-231	89.00	Pre-mRNA-splicing factor 38 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of MC08g2215 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DS16	1.32e-269	100.00	Pre-mRNA-splicing factor 38 OS=Momordica charantia OX=3673 GN=LOC111023319 PE=3 ...	[more]
A0A6J1FBK8	2.38e-231	89.23	Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111443943 PE=3 S...	[more]
A0A1S3BXB0	8.65e-231	88.28	Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103494470 PE=3 SV=1	[more]
A0A6J1HPQ9	6.51e-228	88.04	Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111465574 PE=3 SV=...	[more]
A0A6J1G4M6	7.27e-228	87.86	Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111450740 PE=3 S...	[more]

BLAST of MC08g2215 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40650.1	3.9e-123	66.03	PRP38 family protein	[more]
AT1G60900.1	8.2e-04	47.95	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005037	Pre-mRNA-splicing factor 38	PFAM	PF03371	PRP38	coord: 10..173 e-value: 1.4E-60 score: 204.2
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 1..410
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..330
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..404
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..229
None	No IPR available	PANTHER	PTHR23142:SF1	PRE-MRNA-SPLICING FACTOR 38A	coord: 1..410

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g2215.1	MC08g2215.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome