MC08g2192 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g2192
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNA polymerase II-associated protein 3
LocationMC08: 30771150 .. 30778632 (+)
RNA-Seq ExpressionMC08g2192
SyntenyMC08g2192
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATTCCTCTGGTCTCCGATGGCCGATTCCTCCGGCAAGCACGGGCGTGATAGCTCTCTGGTATTTCCATTTCTCATAAGCTTTCTTTCATTCTTCTTGTTCTTTTACTTGAAAAATCAGTAGAAATGTAAAGCCTTCTAAGTCGATTAGTTCTAAGCACTTGTAACTTTGAGTTGAGCATCCAATTCGTTGTCTGTGGAAGTGGAACTAACGGAATTTATTGATTAGCTCATAGTTTGTCGAGCATTCGGATTTTTGTATTGTGCGGTGTGAATTTCTTTTCCCTTGCATTGCAGTGATTGACAAGGTGAATGTATTAAAACAGGGGTTAGAAATCGTAGTCTGACTTACTGCTGGTGTGTTACGTTACATGCGTGGCTGCTTTTATCGGTTTTTTCATTTTCTTATTGAGGTGTATGTGTTTCGGGCGCATTCTCTTTGTCCAGGATTTCCAGGGATTTTTGAATGACATGCAGGATTGGGAACTCTCCCTTAAGGGAAAGGACAAGAAATTGAAGCCGCAGGCCTTTGGTAAAGAAAAGGAGGTAATAATACTCTATCAAACTGCTGTTGGATGTAGAAATGCGCATTTTAGAACGAGAAATTGCTATTTTGGATGTTGATGTTTATATTGGTTTATGTTATATGAGGATGAGAGTAGTGGAGCATCATCTAGTTTTTATCTCATTACAACCCACCGAAGTAATATTTATAATTAAGTAAAAATAAACCCGGCACCCAGTTTTTTGTGTCTTGCTGGATCTTGTTCAATTACCACTGCTATATTTTACTGCTTATTCATTAAGGTATCTAAATTTGTTCAAGTGTGGGTACATCAATAATAATTTTATACTTTTGTTACGAAATTGGCATAATGCATATTAGAATCATACATTTGTGTTTTATTTCAAAAATTTGAAACTTGGATTCTTGAGAAGTAGATCGTTACATTTTTTTGAGTAGTAATGAATGCTTGATACTATTATGGACCACTTGAGACTTGAGAGGCACCTTAAGTGATGTCATAGCTACCCAGGGTAGAAGGCGGGCAGAAAAGGCTTCTGCAGCTGATTACTTGAAGCACTATGATGCAGTTAACCACCTATCTAGAAATTTTCAGACTGAACAGAGTTTTGTGGATGCTGCTTCAGAGAAGGAACGGGTAGGTTATATTCTTTTGGTCACGTTTTTATGATAGAGGCACAACTGGGTCGACCATGAGATACTTAACTCTTGGCTACATGGTGTGTACAATATATCTTAATATTCTAGGGTAATGAGTATTTTAAGCAAAAGAAGTTTAAAGAAGCTATTGACTGCTATTCAAGAAGTATTGCTTTATCACCAACAGCTGTAGCGTTTGCAAATAGGGCCATGGCCTACCTAAAGATCAAAAGGTAAGTTTCAGTTAATTTACTCAAAGCTTTCCTTTTAATTTGATGCATACTTATTGTATACTTATGGTATCAGATTACCATATTTCTTGAAAATGAAATATAACACCTTTGTTTCTAAGTAATGTTCTGCTATAAGCTATTTTACCAATTGATTAGTGCTCTGATGTGACAAGCTATGAATTATTATTATTATTATTATTTTATTAATTTTATAAGAGACAAGCTATGAATATTAAATGTGTTAAAATTGTTTCTTTCTATGTTATCCTCATGTTTCCACCTCCCTTGAGTCAGATTTCAGGAGGCTGAGGATGACTGTACAGAGGCCTTAAATTTAGATGATCGATATATTAAAGCATATTCACGCCGAGCAACGGCTAGAAAAGAACTTGGGAAGGCTAAAGAAGCCTTGGAGGGTATAAAATAAATATCTTAATTGCACGTGGATCATTTTGTGATTTTTATCCATCTGATATATTTGACTTTGCTGATTACAGATGCTGAATTTGCCCAGAGGTTGGAGCCTCACAACCAAGAGATCAAGAAGCAACATGCTGAGCTCAGAGCTTTTGTTGGGAAAGTAAGTTTTTCAGCATTAATATTTCTTGATATTTTTTAAGTATCTGGATCTCTCCTGAGCTATATGGAGGAAGTCATGTCAATTCATTTATTAGTGAATGAAATTTTTTTTTACAAGAAACAATTTCATTGATGATTACAAAGAGAGGGGCAAACCCACCATTTATTAGTGAATGAAATGGAGAGATAATGCCATTATTATGACGCCCAGTTTGACAGGCGGTGATGTTATGTTGACAAGATAATCTCATTTAATTTTTGTGTGCACATATTTGCAGTCGATTCTTGAGAAGGCATCTGGTGCTTCGAGAAGCTCCTCACAAGATAAGGAGAAGGTTGGAAAATCTGACTCTGAAGCTAAAATTCAGGACGTCCATCCTGTCTCAAGCAGCACACTAAGGACAGGATTACAGGCAGCTCAAGAACACATTGAAGTAAGGATAGATAGTTTGTTGCTGCCCATGGTATCCTGTATTTTCTCATAAAACAAATGTAACCCTGTAATTTCTTAATGAAGATCCAACTCTACAACCTATAATTTTTAATAATACACATTCAACAGATCCCCTCACTTCCTTTTTTTGGATAAGAAACAATTATATTACCACAAAAACAAAACGAAACAATCTGTACACCATTTGTAAAAGAATTCACATGATGTATCATTAAAAAACTCGACCATTTCTCTCTCCAAATATTCTAAAGAAAAGCCCTAGCAGCACATTTCCATAAAATCTTAACTTTGCCCTTCAAATCCCAGTTAACAAGGACTTCATTGAGCCACCCATCGATCATATTAGGCAAACAGCATGGAATTCAAAGATATCAAACAAAAAAGCCCACCCTTTAGAAGTAAGCTTGCAGCACAGAAATGTGTGATCTAGGCTTTCTTCATCTTATGGCAGAGGCTTACATAGAGGGGGAGAGGGACCAACTTCTATACTTTTTCTGTAACCTCTCGTGTGTAATTAAATTTATATAAGCACTACACAAAAAAACTTTCGTTGGAACAGTGAACTTTTTCTGCTTGTATCTTGGCTGTATTATCCTTTTCTGTTCTTGTATTGAGTTTCCTTCCTCAAATTAGCCAAATACAATGCATTTCTTTGCAAGTTTTCTAACTTTTAGTTAATGTTCGTTTAATTTAACTGATGGAAGAAAACTGGTAGTGCATGTTCACCACCTTTTTCATAATGGAATCCAAAGATAATGGTGCTTATTCTGAAGTTGGGTCTCTGGCATGTGATATTTGAGCTCTATTCTCAGGAAAATGTCAGGCAAAAAGCTGTTAAGGCATCTACACGTTTACAGGATACTGAGGACAGAAGTATGGAAGCTGAAATCAGATACAAAAGAGAAGCAACAAATGGTTTTCACAAAGATGCTAGCCCAAGTTTGAATTTGGGGGGATTGGAGGTCTCTTGAGATCCATTTAAACTTTTCTTTTCTGCCTTCTACACTTACGTACTCTTGTTGGTTCCCATTTATATGTTAGCATATACCATTGTTTGCTGAAAAGAAACGGAAATAAGATTGCTGCAGTAGTTTATTGATTGTAAACCAATGTAGGGTTCCTCTAAAAAATGTTATTGAAATGTAATAGAAGCTTGCCACTTTTCTATTGGGTTAGTTGCACATATATCAATTTGGTGCAAAATAATAGAAAATTTAGCCCAAGCTAAAAAGATTTGAAAAAATGACACAATTTTTTTTTTTTTTGCCCGTTGATTAGTGATAGATGTATATGATAGAGTGATAGATGTGTCTATCATTATATATGCTCGCGCTACAAGATTGCCATATTTTTAAAAACTTATTTCTTGTGCTATATTTGCAAAACTATTTGCCACCCATTACAATTCTCCTTTCCTATTCGGGTTGTTTCCATCACATCCACTGCTTTGTGCAGTGGGGTCGTTCTTTTTACTCTTCCTTGAAACTTTCTTTACTCAGAAAAGAACGGTAAAAAAAGAAATGAAGAAATTCTGATGCTTATATTATTGACCCTCTTTTAAAGAGCCTGTGATCTTTGATAAGAAATTCATTATTGTAATGAGTTCACATGCTGATATTGACTCTTTTTGTAAAGAATCTACAATCTGTTATAAGTATCAATTAAAATTGTGATGTATATATACAGCCAGTTCTCTTAAGAGCTGCAATAGGTAGGAGAGGCTTCAGTTAAGTCATTCATTAACTGATGACCAAGCTTGAGAGGGCCCTTCTTACTACGAAGTCACTCTTTACTAATTGATCCAAGCTTCTGCCATGACTCAAGATCCAATAGTCCAATCCTATATTCAAGCATGCCTTGATTATTATTCTTTCCTTAAAAATATGCCATTCCCCCATTAAAAGAAAAATCAAAGGTAACTGAATATGAGACCTCGAGCTCTAATATTGACTGATGTAGGTCAGATGTAACCAATTCTCCCAAAAGTTAGAACTTAGAAGATGATAGTCAATGTCAATCGTACATTTAATCAGGACTAGGCATAAGAGTGCTTTTTTGAATGTAATCCCTTACTGACCTTTGAGGCCTTACTTTTTCAGGACTAGGCACAAGAGTGCTTTTTCAGCCTTCTTTGAGGCCTTACTTTGAAGGTAATCCCTTACTGACCAGCTCAAGCCTTACTCAAGACTCAAAAGCCAATAGATCACCTTCATATGATTAGTCAATTTGAAACTCGTTTATTCGAAGTCCTAAAGTTCAGAGGACTTGATATCGTAGACGTAGAGCGAGCAGGATTGGGGGGAGGGATGACAGACTTCTACTTAACCTTTTTTCATCTTTTTCCCCTTTATCACTTTGTGAACCATGTTATCAGCTCACGCCCATTAGTATGCATGGATATTCCCCAAGTGTTTCTGCCACTAATTCTCGTTCGCAATAATGTCTAAATTCTATTGTTTTCATACTTACACTACTCTCCTGCCAATCTTTTCACAGAGAAATCATGTTACAAGAAAGCAGGAACTGAAGCCATCAGTGCAGGAACTTGCTTCTCGAGCAGCTTCTAGAAGTATGGTTGAAGCTGCCAAAAACATCACAGCCCCAACTACTGCCTATCAATTTGAAGTTTCTTGGCGAGGGTTCTCTGGTGATTGTGCACTGCAGGCTCGTCTTTTGAAGGTATGTGATATATAGACGGACAATGAAACTGCATCCTCTTTTGTAATATTTCATGCATCAATAAAATACTTGTTCCTTCTAATATATATACACACACACTCACACACATACATATAGACCGGACAATGCTGTCAATGGTATTGCGTCCTTTTGGCTATCCAAGACAATGTGAATATATGGTATTTGCAAACATATAAAAATTGTCGTCTGATTAATATTAGAAGCTCGCTGGCTGCTGCCATATTAAAGACTGGTTTGTCAGTCCAACACTCAATTGCTTGATCTTTTTTCATCATCTGATGATCTACTATTTGTTCTTCAATGGAAAAGCCATAGAGGTCACTTGCCGAGTGTATCAAGTAACATGTTAGTTTTGACTACCTAATATTTTTCAAGATAGGGAGTGTTCTTCACACCTTCTGTTTGATTCTATATTTCTCTTAGTTATCTCTTGGTGTAAATGCTCCCCCTCTTTCATTACTATAGTTTTGCCTCCCTCGTATCTAATTGGAGAGCTTTTTTGTGGCCCACTCTAGGGTCCCTCCCCTTTTGTATTCATATTTCATCTTATCAATGAAATAGTTTCTTTTCAAAAAAAAAAAAAAAAAAAAGAGAATAAGACCACCTAATATTGTAGATCATATAGATGCCTCCAGTTTTCTATCTGTTGAGTGCTGACTCATCAATTGGCTGATATATTTCGGTATAAGCAAACATTCTTCTTTCCAATTTGTGGTAACGAGCAATATCGACAATTTGACATGCCGTTGGCAGCAAAGAATTTCACTTTGATAGCAGTAAATGAATGAATTGGGAAATCTATTGAGCCTTAGCATTTTATTCGGCTCTTTTACACATTTTAAAAAAAAAAAATTTTGCCCTATTGTTTTTCTTATTAGGCCATCTCTCCAGCCAAGTTGCCTCAGATATTCAAAAATGCACTAACGGCTCCAATGTTAATAGACATTGTGAAGTGCGTGGCTTCCTTTTTCACGTAAGTTGATAATTTCTAATTTGTCCTCAGCGAACATTTAGAATATCATTTAGAACATCAATGGTTAACAGACCATACTGGCTTATCAATTTGCAGTGAAGAGATGGCATTGGCTATCAACTTTTTAGAAAATTTAACACAGGTTCCAAGATTCGGCATACTCATGATGTGTCTTCCATCCTCAGAAAAGTTTGGTAAGTTGTAGAAACCCTTCCCTCTTTACGCCCTTCTTGCATGGTTACCTTTATTTAATAGATATTTTTCCTATATTTCAAGCGTAGCATGTTTTATAACATCCCCCAAAATGATGATAGAAATTTTTTATTGGACAAGTTCTTATAGAAACTTGAATGTTATGGAGTATGGACTATGAGTTCTGAGAAATTAGATCTTGTCAGGAACTGAAATGTATATCCACACACCGCCCCATAAATAATTACCAAAATCTTAGGACTTATCATGGTGTGTGTTCTATTTATTTGTACTCTAATTCTAAAGCTTTGTGAAACAGATCTTCTCAAGATTTGGGATGAAGTATTTTGTGATGAGGCTGTTCCTATTGAGTACGCAGAAATGCTTGATAGCTTGCGTTCGAAGTACTTTCTTAAACAATGACAGACGTTTCTGGAATGAGAAGAAGCACTTTATCTTCAAACTCTACCTCTCTTAAGCCAGCCCAGCAGCATACTTCAGTGTAAAGTATCCGATTCCTCCTATGTTTTTGGGGTCATATTTTATTTGTGGCATGTTGACATTTCTACCCCACGCAATGAAGTTAGATGTTATGAAAAGCGTCTTATCTCTAGTTCAATTGCAATCTAACTGTCAATTCTTTTCTATAACCTTCCCAACATGTTAGAAAATTCTCTCAGTAGAAGTCATCCCAGACTCGAATTCGACGACTCTTTCTGAACTTGATGATGAACATAAAAGCTTTCATGACAAGAAGAATAAGGTAGGTAGTTGAACACTAGGGTAGTGTCTTTAGGAAGGGCTCCCCATGGTGTGTTGAGGTGCAGTGCCACATGGAGCAGGACAATTGAATGGCCTTTTTTCCATCCATCTGGGCCATCCCTCAACTCAAGAGGTCTTAATGTGAATATATTGATACTTTAGATTTGCTGTTGCATCATAATCAAGTTGGGGTCCTGAGTTCAAATTGGCTTTAGACAAATCATATGCTCTCCTTTGCAATTTATGATATGGGTGTCAGAATTGCTGTCCTGTCATTCATCTTTTTGCTCGTTATGACTTTATGAGTACTTATTGATGTCTGATCCCTCTCTCTATTTTCATCCATGTTGGTGAAAGTTCTGATGGCTTAAGGTTTCTTACTCACAATCTGGGAAATAAATTCTATTAGGATAATTTGGGGTTTCA

mRNA sequence

TCATTCCTCTGGTCTCCGATGGCCGATTCCTCCGGCAAGCACGGGCGTGATAGCTCTCTGGATTTCCAGGGATTTTTGAATGACATGCAGGATTGGGAACTCTCCCTTAAGGGAAAGGACAAGAAATTGAAGCCGCAGGCCTTTGGTAAAGAAAAGGAGGGTAGAAGGCGGGCAGAAAAGGCTTCTGCAGCTGATTACTTGAAGCACTATGATGCAGTTAACCACCTATCTAGAAATTTTCAGACTGAACAGAGTTTTGTGGATGCTGCTTCAGAGAAGGAACGGGGTAATGAGTATTTTAAGCAAAAGAAGTTTAAAGAAGCTATTGACTGCTATTCAAGAAGTATTGCTTTATCACCAACAGCTGTAGCGTTTGCAAATAGGGCCATGGCCTACCTAAAGATCAAAAGATTTCAGGAGGCTGAGGATGACTGTACAGAGGCCTTAAATTTAGATGATCGATATATTAAAGCATATTCACGCCGAGCAACGGCTAGAAAAGAACTTGGGAAGGCTAAAGAAGCCTTGGAGGATGCTGAATTTGCCCAGAGGTTGGAGCCTCACAACCAAGAGATCAAGAAGCAACATGCTGAGCTCAGAGCTTTTGTTGGGAAATCGATTCTTGAGAAGGCATCTGGTGCTTCGAGAAGCTCCTCACAAGATAAGGAGAAGGTTGGAAAATCTGACTCTGAAGCTAAAATTCAGGACGTCCATCCTGTCTCAAGCAGCACACTAAGGACAGGATTACAGGCAGCTCAAGAACACATTGAAGAAAATGTCAGGCAAAAAGCTGTTAAGGCATCTACACGTTTACAGGATACTGAGGACAGAAGTATGGAAGCTGAAATCAGATACAAAAGAGAAGCAACAAATGGTTTTCACAAAGATGCTAGCCCAAGTTTGAATTTGGGGGGATTGGAGAGAAATCATGTTACAAGAAAGCAGGAACTGAAGCCATCAGTGCAGGAACTTGCTTCTCGAGCAGCTTCTAGAAGTATGGTTGAAGCTGCCAAAAACATCACAGCCCCAACTACTGCCTATCAATTTGAAGTTTCTTGGCGAGGGTTCTCTGGTGATTGTGCACTGCAGGCTCGTCTTTTGAAGGCCATCTCTCCAGCCAAGTTGCCTCAGATATTCAAAAATGCACTAACGGCTCCAATGTTAATAGACATTGTGAAGTGCGTGGCTTCCTTTTTCACTGAAGAGATGGCATTGGCTATCAACTTTTTAGAAAATTTAACACAGGTTCCAAGATTCGGCATACTCATGATGTGTCTTCCATCCTCAGAAAAGTTTGATCTTCTCAAGATTTGGGATGAAGTATTTTGTGATGAGGCTGTTCCTATTGAGTACGCAGAAATGCTTGATAGCTTGCGTTCGAAGTACTTTCTTAAACAATGACAGACGTTTCTGGAATGAGAAGAAGCACTTTATCTTCAAACTCTACCTCTCTTAAGCCAGCCCAGCAGCATACTTCAGTAAAATTCTCTCAGTAGAAGTCATCCCAGACTCGAATTCGACGACTCTTTCTGAACTTGATGATGAACATAAAAGCTTTCATGACAAGAAGAATAAGGTAGGTAGTTGAACACTAGGGTAGTGTCTTTAGGAAGGGCTCCCCATGGTGTGTTGAGGTGCAGTGCCACATGGAGCAGGACAATTGAATGGCCTTTTTTCCATCCATCTGGGCCATCCCTCAACTCAAGAGGTCTTAATGTGAATATATTGATACTTTAGATTTGCTGTTGCATCATAATCAAGTTGGGGTCCTGAGTTCAAATTGGCTTTAGACAAATCATATGCTCTCCTTTGCAATTTATGATATGGGTGTCAGAATTGCTGTCCTGTCATTCATCTTTTTGCTCGTTATGACTTTATGAGTACTTATTGATGTCTGATCCCTCTCTCTATTTTCATCCATGTTGGTGAAAGTTCTGATGGCTTAAGGTTTCTTACTCACAATCTGGGAAATAAATTCTATTAGGATAATTTGGGGTTTCA

Coding sequence (CDS)

TCATTCCTCTGGTCTCCGATGGCCGATTCCTCCGGCAAGCACGGGCGTGATAGCTCTCTGGATTTCCAGGGATTTTTGAATGACATGCAGGATTGGGAACTCTCCCTTAAGGGAAAGGACAAGAAATTGAAGCCGCAGGCCTTTGGTAAAGAAAAGGAGGGTAGAAGGCGGGCAGAAAAGGCTTCTGCAGCTGATTACTTGAAGCACTATGATGCAGTTAACCACCTATCTAGAAATTTTCAGACTGAACAGAGTTTTGTGGATGCTGCTTCAGAGAAGGAACGGGGTAATGAGTATTTTAAGCAAAAGAAGTTTAAAGAAGCTATTGACTGCTATTCAAGAAGTATTGCTTTATCACCAACAGCTGTAGCGTTTGCAAATAGGGCCATGGCCTACCTAAAGATCAAAAGATTTCAGGAGGCTGAGGATGACTGTACAGAGGCCTTAAATTTAGATGATCGATATATTAAAGCATATTCACGCCGAGCAACGGCTAGAAAAGAACTTGGGAAGGCTAAAGAAGCCTTGGAGGATGCTGAATTTGCCCAGAGGTTGGAGCCTCACAACCAAGAGATCAAGAAGCAACATGCTGAGCTCAGAGCTTTTGTTGGGAAATCGATTCTTGAGAAGGCATCTGGTGCTTCGAGAAGCTCCTCACAAGATAAGGAGAAGGTTGGAAAATCTGACTCTGAAGCTAAAATTCAGGACGTCCATCCTGTCTCAAGCAGCACACTAAGGACAGGATTACAGGCAGCTCAAGAACACATTGAAGAAAATGTCAGGCAAAAAGCTGTTAAGGCATCTACACGTTTACAGGATACTGAGGACAGAAGTATGGAAGCTGAAATCAGATACAAAAGAGAAGCAACAAATGGTTTTCACAAAGATGCTAGCCCAAGTTTGAATTTGGGGGGATTGGAGAGAAATCATGTTACAAGAAAGCAGGAACTGAAGCCATCAGTGCAGGAACTTGCTTCTCGAGCAGCTTCTAGAAGTATGGTTGAAGCTGCCAAAAACATCACAGCCCCAACTACTGCCTATCAATTTGAAGTTTCTTGGCGAGGGTTCTCTGGTGATTGTGCACTGCAGGCTCGTCTTTTGAAGGCCATCTCTCCAGCCAAGTTGCCTCAGATATTCAAAAATGCACTAACGGCTCCAATGTTAATAGACATTGTGAAGTGCGTGGCTTCCTTTTTCACTGAAGAGATGGCATTGGCTATCAACTTTTTAGAAAATTTAACACAGGTTCCAAGATTCGGCATACTCATGATGTGTCTTCCATCCTCAGAAAAGTTTGATCTTCTCAAGATTTGGGATGAAGTATTTTGTGATGAGGCTGTTCCTATTGAGTACGCAGAAATGCTTGATAGCTTGCGTTCGAAGTACTTTCTTAAACAATGA

Protein sequence

SFLWSPMADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGLERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Homology
BLAST of MC08g2192 vs. ExPASy Swiss-Prot
Match: Q5ZKQ3 (RNA polymerase II-associated protein 3 OS=Gallus gallus OX=9031 GN=RPAP3 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 8.0e-29
Identity = 127/419 (30.31%), Postives = 211/419 (50.36%), Query Frame = 0

Query: 37  KGKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKERG 96
           K + KK++ QA   E   ++  E+A  ++  ++        R  + EQ    A +EK+ G
Sbjct: 238 KNELKKIE-QALSSESSEQKEFEEAVRSELTENE------RRCIEEEQLKQKAVTEKDLG 297

Query: 97  NEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRY 156
           N YFK+ K++ AI+CY+R IA   T A+  ANRAMAYLKI++++EAE+DCT+AL LD  Y
Sbjct: 298 NGYFKEGKYEAAIECYTRGIAADGTNALLPANRAMAYLKIQKYEEAENDCTQALLLDASY 357

Query: 157 IKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKSILEKASGAS 216
            KA++RR  AR  LGK KEA++D E   +LEP N++   +  ++R      + EK     
Sbjct: 358 SKAFARRGAARVALGKLKEAMQDFEAVLKLEPGNKQAINELTKIR----NELAEK----E 417

Query: 217 RSSSQDKEKVGKSDSEAK--IQDVH-PVSSSTLRTGLQAAQEHIEENVRQKAVKASTRL- 276
           +S  ++   V   +SE K  ++  H P++  + +   + A E ++++V      +ST L 
Sbjct: 418 QSCHEEYPAVLIKESEIKNIVKLTHNPLNLKSTKPLRRIAVEEVDDDVLNSDFSSSTSLV 477

Query: 277 ----------------QDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGLERNHVTRKQ 336
                           QD +  SM+   + K+         +SP L  G    + V    
Sbjct: 478 NNWKNSVNIETTENLDQDDQLTSMDIP-KAKQLKIEEITDVSSPQLPAGAKGVSSV---- 537

Query: 337 ELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL-LKAISPAK 396
            L PS+ +   R    S   A+     P  ++Q E  +R    DC  +  L LK I P+ 
Sbjct: 538 -LHPSMNKQIERENKASFRSASPVPAIPANSFQLESDFRKLK-DCPEKMYLYLKQIEPSI 597

Query: 397 LPQIFKNALTAPMLIDIVKCVASFF--TEEMALAINFLENLTQVPRFGILMMCLPSSEK 432
            P++F+ +L   +   I++ +  F+   EE +L +  L+ L+++ RF + +M +  SEK
Sbjct: 598 YPKLFQKSLDPDLFNQILRILHDFYIEKEEPSLILEILQRLSELKRFDMAVMFMSGSEK 634

BLAST of MC08g2192 vs. ExPASy Swiss-Prot
Match: Q68FQ7 (RNA polymerase II-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Rpap3 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.7e-26
Identity = 108/366 (29.51%), Postives = 187/366 (51.09%), Query Frame = 0

Query: 89  AASEKERGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIKRFQEAEDDCTE 148
           A +EK+ GN +FK+ K+++AI+CY+R IA   T A+  ANRAMAYLK+++++EAE DCT+
Sbjct: 282 AIAEKDLGNGFFKEGKYEQAIECYTRGIAADSTNALLPANRAMAYLKVQKYEEAERDCTQ 341

Query: 149 ALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKSI 208
           A+ LD  Y KA++RR TAR  LGK  EA +D E    LEP N++   + + ++    K +
Sbjct: 342 AILLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGNKQAVTELSRIK----KEL 401

Query: 209 LEKA--SGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAV 268
           +EK         S+Q    V   DS       H  S   L+        ++ E+V   A 
Sbjct: 402 IEKGRWDDVFLDSTQRHNVVKPVDSP------HRGSPKALKKVFIEETGNLIESV--DAP 461

Query: 269 KASTRLQDTEDRSMEAEIRYKREATNG--FHKDASPSLNLGGLE--------RNHVTRKQ 328
           ++S  + +++  ++  +   K++ + G       +P   +  +E        +  V  KQ
Sbjct: 462 ESSATVPESDRAAVAVDTGRKKDFSQGDSVSSGETPRAKVLKIEAVGDSSAPQAQVDVKQ 521

Query: 329 ELKPSVQELASRAASRSMVEAAKNITAPTTA--YQFEVSWRGFSGDCALQARLLKAISPA 388
            ++ SV E  S   +++  + A  +  P  A  +Q E  +R       +  + +K I P+
Sbjct: 522 GVRQSVSEKTSVRVAQTPGQLAAVVLPPVPANSFQLESDFRQLRSSPEMLYQYVKKIEPS 581

Query: 389 KLPQIFKNALTAPMLIDIVKCVASFFT--EEMALAINFLENLTQVPRFGILMMCLPSSEK 438
             P++F+  L   +   I+K +  F+   E+ AL    LE L+Q+ RF + +M +  +E+
Sbjct: 582 LYPKLFQKNLDPDVFNQIIKILHDFYVEREKPALIFEVLERLSQLRRFDMAVMFMSGTER 634

BLAST of MC08g2192 vs. ExPASy Swiss-Prot
Match: Q9D706 (RNA polymerase II-associated protein 3 OS=Mus musculus OX=10090 GN=Rpap3 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.9e-25
Identity = 114/372 (30.65%), Postives = 181/372 (48.66%), Query Frame = 0

Query: 83  EQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIKRFQEA 142
           +Q    A +EK+ GN +FK+ K+++AI+CY+R IA   T A+  ANRAMAYLKI+R++EA
Sbjct: 278 QQGRQKAIAEKDLGNGFFKEGKYEQAIECYTRGIAADRTNALLPANRAMAYLKIQRYEEA 337

Query: 143 EDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQE-------IKK 202
           E DCT+A+ LD  Y KA++RR TAR  LGK  EA +D E    LEP N++       IKK
Sbjct: 338 ERDCTQAIVLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGNKQAATELSRIKK 397

Query: 203 QHAE--------LRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVH-PVSSSTL 262
           +  E        L +     +++      R S +  +KV   ++   I+ V  P SS+T+
Sbjct: 398 ELIEKGHWDDVFLDSTQRHHVVKAVDNPPRGSPKALKKVFIEETGNLIETVDAPDSSATV 457

Query: 263 RTGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREA--TNGFHKDASPSLNL 322
                      E +    AV   T+   +E  S+ A  R + +          ++P   +
Sbjct: 458 P----------ESDRATAAVGTGTKKNPSEGVSLPAGDRPRAKVLKIEAVSDTSAPQAQV 517

Query: 323 GGLERNHVTRKQELKPSVQELASRAASR--SMVEAAKNITAPTTAYQFEVSWRGFSGDCA 382
           G         KQ+ +    E AS  A +    + AA     P  ++Q E  +R       
Sbjct: 518 G--------VKQDARQPGSEKASVRAEQMPGQLAAAGLPPVPANSFQLESDFRQLRSSPE 577

Query: 383 LQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFF--TEEMALAINFLENLTQVPRF 432
           +  + +K I P+  P++F+  L   +   I+K +  F+   E+ AL    LE L+Q+ RF
Sbjct: 578 MLYQYVKNIEPSLYPKLFQKNLDPDVFNQIIKILHDFYIEREKPALIFEVLERLSQLRRF 631

BLAST of MC08g2192 vs. ExPASy Swiss-Prot
Match: Q6NU95 (RNA polymerase II-associated protein 3 OS=Xenopus laevis OX=8355 GN=rpap3 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.7e-24
Identity = 107/375 (28.53%), Postives = 179/375 (47.73%), Query Frame = 0

Query: 78  RNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIK 137
           +  + +Q    A  +K+ GN YFK+ K++ AI+CYS+ +    T A+  ANRAMAYLKI+
Sbjct: 273 KQIEIQQRKQQAIMQKDLGNAYFKEGKYEIAIECYSQGMEADNTNALLPANRAMAYLKIQ 332

Query: 138 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQH 197
           +++EAE DCT A++LD  Y KA++RR TA   LGK KEA ED E   +L+P N++     
Sbjct: 333 KYKEAEADCTLAISLDASYCKAFARRGTASIMLGKQKEAKEDFEMVLKLDPGNKQ----- 392

Query: 198 AELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHI 257
                    ++LE A  +    S +K++ G  DS  + + ++ V         +  +  +
Sbjct: 393 ---------AVLELAKISQELRSIEKDRNGNKDSNQR-KLINTVEKLPHLRSTKPLRRMV 452

Query: 258 EENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDAS-------PSLNLGGLERN 317
            E V   A   +T L++T  R  ++        T   +++ +       PS  +  +E  
Sbjct: 453 IEEVGGPAEIFNTSLKETNHRKADSVDLTAETNTQDLNQEQNICNSPDVPSPKIPKIEEI 512

Query: 318 HVTRKQELKPSVQE--LASRAASRSMVEAAKNIT---------APTTAYQFEVSWRGFSG 377
             T     +P+  E  L SR +   + +     +          PT ++Q E  +R   G
Sbjct: 513 SDT-PGSCEPTTGEDYLTSRPSPPKIEKVVSTFSESLNIGIPAVPTNSFQLESDFRRLKG 572

Query: 378 DCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMA--LAINFLENLTQV 432
           +  L    LK I P    ++FK AL   +  DI+  +   F  + +  L    L+ L+++
Sbjct: 573 NPDLLYVYLKQIEPTLYGKLFKKALDPDLFSDILTILREQFINKDSPDLIFEILQRLSEL 631

BLAST of MC08g2192 vs. ExPASy Swiss-Prot
Match: Q9H6T3 (RNA polymerase II-associated protein 3 OS=Homo sapiens OX=9606 GN=RPAP3 PE=1 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 3.0e-23
Identity = 116/420 (27.62%), Postives = 197/420 (46.90%), Query Frame = 0

Query: 42  KLKPQAFGKEKEGRRRAEKASAAD--YLKHYDAVNHLS----RNFQTEQSFVDAASEKER 101
           +L+P  F    E R+ ++  ++ +  Y K  D V   +    +  + +Q+   A SEK+R
Sbjct: 229 ELEPNNFEATNELRKISQALASKENSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDR 288

Query: 102 GNEYFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDR 161
           GN +FK+ K++ AI+CY+R IA     A+  ANRAMAYLKI++++EAE DCT+A+ LD  
Sbjct: 289 GNGFFKEGKYERAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGS 348

Query: 162 YIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKSILEKA--S 221
           Y KA++RR TAR  LGK  EA +D E    LEP N++   + ++++    K ++EK    
Sbjct: 349 YSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNKQAVTELSKIK----KELIEKGHWD 408

Query: 222 GASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQ 281
                S+Q +  V   D+       HP S+  L+   +   E     ++   V  ST   
Sbjct: 409 DVFLDSTQRQNVVKPIDNPP-----HPGSTKPLK---KVIIEETGNLIQTIDVPDSTTAA 468

Query: 282 DTEDRSMEAEIRYKREAT----NGFHKDASPSLNLGG---LERNHVTRKQELKPSV---Q 341
             E+  +          T    N    D  P+ +      L+   V+    L+P     Q
Sbjct: 469 APENNPINLANVIAATGTTSKKNSSQDDLFPTSDTPRAKVLKIEEVSDTSSLQPQASLKQ 528

Query: 342 ELASRAASRSMVEAAKNIT---------APTTAYQFEVSWRGFSGDCALQARLLKAISPA 401
           ++    + +  +E  +             P  ++Q E  +R       +  + LK I P+
Sbjct: 529 DVCQSYSEKMPIEIEQKPAQFATTVLPPIPANSFQLESDFRQLKSSPDMLYQYLKQIEPS 588

Query: 402 KLPQIFKNALTAPMLIDIVKCVASFF--TEEMALAINFLENLTQVPRFGILMMCLPSSEK 432
             P++F+  L   +   IVK +  F+   E+  L    L+ L+++ RF + +M +  +EK
Sbjct: 589 LYPKLFQKNLDPDVFNQIVKILHDFYIEKEKPLLIFEILQRLSELKRFDMAVMFMSETEK 636

BLAST of MC08g2192 vs. NCBI nr
Match: XP_022156426.1 (RNA polymerase II-associated protein 3 [Momordica charantia])

HSP 1 Score: 877 bits (2267), Expect = 0.0
Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 0

Query: 7   MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADY 66
           MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADY
Sbjct: 1   MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADY 60

Query: 67  LKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 126
           LKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA
Sbjct: 61  LKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 120

Query: 127 NRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 186
           NRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180

Query: 187 PHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLR 246
           PHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLR
Sbjct: 181 PHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLR 240

Query: 247 TGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGL 306
           TGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGL
Sbjct: 241 TGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGL 300

Query: 307 ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL 366
           ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL
Sbjct: 301 ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL 360

Query: 367 LKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCL 426
           LKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCL
Sbjct: 361 LKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCL 420

Query: 427 PSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 466
           PSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Sbjct: 421 PSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 460

BLAST of MC08g2192 vs. NCBI nr
Match: XP_022965718.1 (RNA polymerase II-associated protein 3 isoform X1 [Cucurbita maxima])

HSP 1 Score: 749 bits (1935), Expect = 4.56e-270
Identity = 396/459 (86.27%), Postives = 423/459 (92.16%), Query Frame = 0

Query: 7   MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADY 66
           MADSSGKHGRD  LDFQGFLND+QDWELSL G+DKKLKP A  KEKEG R+  KA+AADY
Sbjct: 1   MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60

Query: 67  LKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 126
           +KHYDA+N LS     EQSFVDAASEKE+GNEYFKQKKFKEAI CYSRSIALSPTAVAFA
Sbjct: 61  VKHYDAINSLSTKSHNEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120

Query: 127 NRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 186
           NRAMAYLKI+RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180

Query: 187 PHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLR 246
           P+NQEIKKQHAELRAFVGK+ILEKASGASRSS++DK+ VGKSDSEAKIQD+ PVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKDKKMVGKSDSEAKIQDIPPVSSSTLR 240

Query: 247 TGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGL 306
           +GL AAQEH+EEN  +KAVK S RL+ TE RS  AEIRYKREATNG HKD  P+ NLG L
Sbjct: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKD--PNSNLGAL 300

Query: 307 ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL 366
           ERNHV+RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGD ALQARL
Sbjct: 301 ERNHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARL 360

Query: 367 LKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCL 426
           LKAISPAKLPQIFKNAL+AP+LIDIVKCVA+FFTEEMALAI+FLENL +VPRF ILMMCL
Sbjct: 361 LKAISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCL 420

Query: 427 PSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK 465
           PS+EKFDLLKIWDEVFCDEAVPIEYAEMLDSLRS+YFLK
Sbjct: 421 PSNEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSEYFLK 457

BLAST of MC08g2192 vs. NCBI nr
Match: XP_022937809.1 (RNA polymerase II-associated protein 3 isoform X1 [Cucurbita moschata])

HSP 1 Score: 746 bits (1925), Expect = 1.52e-268
Identity = 395/459 (86.06%), Postives = 421/459 (91.72%), Query Frame = 0

Query: 7   MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADY 66
           MADSSGKHGRD  LDFQGFLND+QDWELSL G+DKKLKP A  KEKEG R+  KA+AADY
Sbjct: 1   MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60

Query: 67  LKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 126
           +KHYDAVN LS    TEQSFVDAASEKE+GNEYFKQKKFKEAI CYSRSIALSPTAVAFA
Sbjct: 61  MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120

Query: 127 NRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 186
           NRAMAYLKI+RFQEAEDDCTEALN DDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNFDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180

Query: 187 PHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLR 246
           P+NQEIKKQHAELRAFVGK+ILEKASGASRSS+++K+ VGKSDSEAKIQD+ PVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240

Query: 247 TGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGL 306
           +GL AAQEH+EEN  +KAVK S RL+ TE RS  AEIRYKREATNG HKD  P+ NLG L
Sbjct: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKD--PNSNLGAL 300

Query: 307 ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL 366
           ERNHV+RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGD ALQARL
Sbjct: 301 ERNHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARL 360

Query: 367 LKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCL 426
           LKAISPAKLPQIFKNAL+AP+LID VKCVA+FFTEEMALAI+FLENL +VPRF ILMMCL
Sbjct: 361 LKAISPAKLPQIFKNALSAPILIDTVKCVATFFTEEMALAISFLENLAKVPRFSILMMCL 420

Query: 427 PSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK 465
           PS+EK DLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK
Sbjct: 421 PSNEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK 457

BLAST of MC08g2192 vs. NCBI nr
Match: XP_023538477.1 (RNA polymerase II-associated protein 3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 740 bits (1911), Expect = 2.06e-266
Identity = 394/459 (85.84%), Postives = 420/459 (91.50%), Query Frame = 0

Query: 7   MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADY 66
           MADSSGKHGRD  LDFQGFLND+QDWELSL G+DKKLKP A  KEKEG R+  KA+AADY
Sbjct: 1   MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60

Query: 67  LKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 126
           LKHYDAV  LS    TEQSFVDAASEKE+GNEYFKQKKFKEAI CYSRSIALSPTAVAFA
Sbjct: 61  LKHYDAVKSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120

Query: 127 NRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 186
           NRAMAYLKI+RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180

Query: 187 PHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLR 246
           P+NQEIKKQHAELRAFVGK+ILEKASGASRSS+++K+ VGKSDSEAKIQD+ PVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240

Query: 247 TGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGL 306
           +GL AAQ+HIEEN  +KAVK S RL+ TE RS  AEIRYKREATNG HKD  P+ NLG L
Sbjct: 241 SGLSAAQDHIEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKD--PNSNLGAL 300

Query: 307 ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL 366
           ERNHV+RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGD ALQA+L
Sbjct: 301 ERNHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQAQL 360

Query: 367 LKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCL 426
           LKAISPAKLP IFKNAL+AP+LIDIVKCVA+FFTEEMALAI+FLENL +VPRF ILMMCL
Sbjct: 361 LKAISPAKLPPIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCL 420

Query: 427 PSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK 465
           PS+EK DLLKIWD VFCDEAVPIEYAEMLDSLRSKYFLK
Sbjct: 421 PSNEKSDLLKIWDGVFCDEAVPIEYAEMLDSLRSKYFLK 457

BLAST of MC08g2192 vs. NCBI nr
Match: KAG7021040.1 (RNA polymerase II-associated protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 739 bits (1907), Expect = 6.69e-266
Identity = 392/454 (86.34%), Postives = 418/454 (92.07%), Query Frame = 0

Query: 7   MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADY 66
           MADSSGKHGRD  LDFQGFLND+QDWELSL G+DKKLKP A  KEKEG R+  KA+AADY
Sbjct: 1   MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60

Query: 67  LKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 126
           +KHYDAVN LS    TEQSFVDAASEKE+GNEYFKQKKFKEAI CYSRSIALSPTAVAFA
Sbjct: 61  MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120

Query: 127 NRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 186
           NRAMAYLKI+RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180

Query: 187 PHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLR 246
           P+NQEIKKQHAELRAFVGK+ILEKASGASRSS+++K+ VGKSDSEAKIQD+ PVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240

Query: 247 TGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGL 306
           +GL AAQEH+EEN  +KAVK S RL+ TE RS  AEIRYKREATNG HKD  P+ NLG L
Sbjct: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKD--PNSNLGAL 300

Query: 307 ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL 366
           ERNHV+RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGD ALQARL
Sbjct: 301 ERNHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARL 360

Query: 367 LKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCL 426
           LKAISPAKLPQIFKNAL+AP+LIDIVKCVA+FFTEEMALAI+FLENL +VPRF ILMMCL
Sbjct: 361 LKAISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCL 420

Query: 427 PSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRS 460
           PS+EK DLLKIWDEVFCDEAVPIEYAEMLDSLRS
Sbjct: 421 PSNEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRS 452

BLAST of MC08g2192 vs. ExPASy TrEMBL
Match: A0A6J1DUX9 (RNA polymerase II-associated protein 3 OS=Momordica charantia OX=3673 GN=LOC111023318 PE=4 SV=1)

HSP 1 Score: 877 bits (2267), Expect = 0.0
Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 0

Query: 7   MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADY 66
           MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADY
Sbjct: 1   MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADY 60

Query: 67  LKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 126
           LKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA
Sbjct: 61  LKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 120

Query: 127 NRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 186
           NRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180

Query: 187 PHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLR 246
           PHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLR
Sbjct: 181 PHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLR 240

Query: 247 TGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGL 306
           TGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGL
Sbjct: 241 TGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGL 300

Query: 307 ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL 366
           ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL
Sbjct: 301 ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL 360

Query: 367 LKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCL 426
           LKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCL
Sbjct: 361 LKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCL 420

Query: 427 PSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 466
           PSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Sbjct: 421 PSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 460

BLAST of MC08g2192 vs. ExPASy TrEMBL
Match: A0A6J1HPT1 (RNA polymerase II-associated protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465531 PE=4 SV=1)

HSP 1 Score: 749 bits (1935), Expect = 2.21e-270
Identity = 396/459 (86.27%), Postives = 423/459 (92.16%), Query Frame = 0

Query: 7   MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADY 66
           MADSSGKHGRD  LDFQGFLND+QDWELSL G+DKKLKP A  KEKEG R+  KA+AADY
Sbjct: 1   MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60

Query: 67  LKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 126
           +KHYDA+N LS     EQSFVDAASEKE+GNEYFKQKKFKEAI CYSRSIALSPTAVAFA
Sbjct: 61  VKHYDAINSLSTKSHNEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120

Query: 127 NRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 186
           NRAMAYLKI+RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180

Query: 187 PHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLR 246
           P+NQEIKKQHAELRAFVGK+ILEKASGASRSS++DK+ VGKSDSEAKIQD+ PVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKDKKMVGKSDSEAKIQDIPPVSSSTLR 240

Query: 247 TGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGL 306
           +GL AAQEH+EEN  +KAVK S RL+ TE RS  AEIRYKREATNG HKD  P+ NLG L
Sbjct: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKD--PNSNLGAL 300

Query: 307 ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL 366
           ERNHV+RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGD ALQARL
Sbjct: 301 ERNHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARL 360

Query: 367 LKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCL 426
           LKAISPAKLPQIFKNAL+AP+LIDIVKCVA+FFTEEMALAI+FLENL +VPRF ILMMCL
Sbjct: 361 LKAISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCL 420

Query: 427 PSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK 465
           PS+EKFDLLKIWDEVFCDEAVPIEYAEMLDSLRS+YFLK
Sbjct: 421 PSNEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSEYFLK 457

BLAST of MC08g2192 vs. ExPASy TrEMBL
Match: A0A6J1FCA0 (RNA polymerase II-associated protein 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444090 PE=4 SV=1)

HSP 1 Score: 746 bits (1925), Expect = 7.36e-269
Identity = 395/459 (86.06%), Postives = 421/459 (91.72%), Query Frame = 0

Query: 7   MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADY 66
           MADSSGKHGRD  LDFQGFLND+QDWELSL G+DKKLKP A  KEKEG R+  KA+AADY
Sbjct: 1   MADSSGKHGRDQPLDFQGFLNDLQDWELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60

Query: 67  LKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 126
           +KHYDAVN LS    TEQSFVDAASEKE+GNEYFKQKKFKEAI CYSRSIALSPTAVAFA
Sbjct: 61  MKHYDAVNSLSTKSHTEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120

Query: 127 NRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 186
           NRAMAYLKI+RFQEAEDDCTEALN DDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNFDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180

Query: 187 PHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLR 246
           P+NQEIKKQHAELRAFVGK+ILEKASGASRSS+++K+ VGKSDSEAKIQD+ PVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKEKKMVGKSDSEAKIQDIPPVSSSTLR 240

Query: 247 TGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGL 306
           +GL AAQEH+EEN  +KAVK S RL+ TE RS  AEIRYKREATNG HKD  P+ NLG L
Sbjct: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKD--PNSNLGAL 300

Query: 307 ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL 366
           ERNHV+RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGD ALQARL
Sbjct: 301 ERNHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARL 360

Query: 367 LKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCL 426
           LKAISPAKLPQIFKNAL+AP+LID VKCVA+FFTEEMALAI+FLENL +VPRF ILMMCL
Sbjct: 361 LKAISPAKLPQIFKNALSAPILIDTVKCVATFFTEEMALAISFLENLAKVPRFSILMMCL 420

Query: 427 PSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK 465
           PS+EK DLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK
Sbjct: 421 PSNEKSDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK 457

BLAST of MC08g2192 vs. ExPASy TrEMBL
Match: A0A1S3BWU0 (RNA polymerase II-associated protein 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494093 PE=4 SV=1)

HSP 1 Score: 727 bits (1877), Expect = 1.36e-260
Identity = 390/466 (83.69%), Postives = 418/466 (89.70%), Query Frame = 0

Query: 1   SFLWSPMADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEK 60
           SF  S MADSSGKHGRD  LDFQGFLND+QDWE+S KGKDKKLKPQA GKEKE RR+ EK
Sbjct: 55  SFFCSSMADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEK 114

Query: 61  ASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSP 120
           ASAADYLK YDAVN LSRNFQTEQSFVDAASEKE+GNEYFKQKKFKEAIDCYSRSIALSP
Sbjct: 115 ASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSP 174

Query: 121 TAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAE 180
           TAVAFANRAMAYLKI+RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAE
Sbjct: 175 TAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAE 234

Query: 181 FAQRLEPHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPV 240
           FAQRLEP+NQEIKKQHA+LRAFVGK+ILEKASGASRSS +DK+ + KSDS+AKIQD+ PV
Sbjct: 235 FAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPV 294

Query: 241 SSSTLRTGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPS 300
           SSST RTGL AA+E +EEN  + AVK S R+++ ED S  AEI  K+ ATNGFHKD+S  
Sbjct: 295 SSSTSRTGLLAARERVEENGGENAVKTSARVEENEDISTRAEIACKKVATNGFHKDSSSY 354

Query: 301 LNLGGLERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDC 360
             L  LER+H+ RK ELK SVQELAS+AASRSMVEAAKNI APTTAYQFEVSWRGFS D 
Sbjct: 355 --LWALERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQ 414

Query: 361 ALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFG 420
           ALQA LLK ISPAKLPQIFKNALTAP+LIDIVKCVA+FFTEE ALAI+FLENL +VPRF 
Sbjct: 415 ALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFS 474

Query: 421 ILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 466
           ILMMCL SSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Sbjct: 475 ILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 518

BLAST of MC08g2192 vs. ExPASy TrEMBL
Match: A0A6J1HRS3 (RNA polymerase II-associated protein 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465531 PE=4 SV=1)

HSP 1 Score: 722 bits (1863), Expect = 1.39e-259
Identity = 387/459 (84.31%), Postives = 413/459 (89.98%), Query Frame = 0

Query: 7   MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRRRAEKASAADY 66
           MADSSGKHGRD  LD          WELSL G+DKKLKP A  KEKEG R+  KA+AADY
Sbjct: 1   MADSSGKHGRDQPLD----------WELSLNGRDKKLKPHAISKEKEGGRQPVKATAADY 60

Query: 67  LKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 126
           +KHYDA+N LS     EQSFVDAASEKE+GNEYFKQKKFKEAI CYSRSIALSPTAVAFA
Sbjct: 61  VKHYDAINSLSTKSHNEQSFVDAASEKEQGNEYFKQKKFKEAIGCYSRSIALSPTAVAFA 120

Query: 127 NRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 186
           NRAMAYLKI+RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180

Query: 187 PHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLR 246
           P+NQEIKKQHAELRAFVGK+ILEKASGASRSS++DK+ VGKSDSEAKIQD+ PVSSSTLR
Sbjct: 181 PNNQEIKKQHAELRAFVGKAILEKASGASRSSTKDKKMVGKSDSEAKIQDIPPVSSSTLR 240

Query: 247 TGLQAAQEHIEENVRQKAVKASTRLQDTEDRSMEAEIRYKREATNGFHKDASPSLNLGGL 306
           +GL AAQEH+EEN  +KAVK S RL+ TE RS  AEIRYKREATNG HKD  P+ NLG L
Sbjct: 241 SGLSAAQEHVEENGGEKAVKESARLEGTEGRSTGAEIRYKREATNGVHKD--PNSNLGAL 300

Query: 307 ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL 366
           ERNHV+RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGD ALQARL
Sbjct: 301 ERNHVSRKQELKPSVQELASRAASRSMVEAAKNIVAPTTAYQFEVSWRGFSGDRALQARL 360

Query: 367 LKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCL 426
           LKAISPAKLPQIFKNAL+AP+LIDIVKCVA+FFTEEMALAI+FLENL +VPRF ILMMCL
Sbjct: 361 LKAISPAKLPQIFKNALSAPILIDIVKCVATFFTEEMALAISFLENLAKVPRFSILMMCL 420

Query: 427 PSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK 465
           PS+EKFDLLKIWDEVFCDEAVPIEYAEMLDSLRS+YFLK
Sbjct: 421 PSNEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSEYFLK 447

BLAST of MC08g2192 vs. TAIR 10
Match: AT1G56440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 454.5 bits (1168), Expect = 1.0e-127
Identity = 262/479 (54.70%), Postives = 338/479 (70.56%), Query Frame = 0

Query: 7   MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRR--RAEKASAA 66
           MA S  KHGRD + DFQGF ND+QDWELSLK KDKK+K Q            R   +   
Sbjct: 1   MARSPSKHGRDQTQDFQGFFNDLQDWELSLKDKDKKIKQQPANSSNPSSETFRPSGSGKY 60

Query: 67  DYLKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVA 126
           D+ K Y ++  LS +   E S +D++SEKE+GNE+FKQKKF EAIDCYSRSIALSP AV 
Sbjct: 61  DFAKKYRSIRDLSSSLIGE-SLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPNAVT 120

Query: 127 FANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQR 186
           +ANRAMAYLKIKR++EAE DCTEALNLDDRYIKAYSRRATARKELG  KEA EDAEFA R
Sbjct: 121 YANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALR 180

Query: 187 LEPHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSST 246
           LEP +QE+KKQ+A++++ + K I+EKA+GA +S++Q+  K   S  + KIQ      +S 
Sbjct: 181 LEPESQELKKQYADIKSLLEKEIIEKATGAMQSTAQELLKT--SGLDKKIQKPKTEMTSK 240

Query: 247 LRTGLQAAQEHIEENVRQKAVKASTRLQDT---EDRSME--------AEIRYKREATNG- 306
             T +      I + V      +  +L +    E++S E         EI   ++ T G 
Sbjct: 241 PVTLVAKTNRDIVQPVLGSNESSGKKLIENIQPEEKSKEGSMKIPAITEILDSKKVTPGS 300

Query: 307 --FHKDASPSLNLG---GLERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAY 366
             + K+A PS   G       N V+++ ELKPSVQELA+ AAS +M EA+KNI  P +AY
Sbjct: 301 QSYEKEAKPSDRNGTQPSGPENQVSKQLELKPSVQELAAHAASLAMTEASKNIKTPKSAY 360

Query: 367 QFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAI 426
           +FE SWR FSGD AL+++LLK  +P+ LPQIFKNALT+P+L+DI+KCVASFFTE+M LA+
Sbjct: 361 EFENSWRSFSGDSALRSQLLKVTTPSSLPQIFKNALTSPVLVDIIKCVASFFTEDMDLAV 420

Query: 427 NFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 467
            ++ENLT+VPRF +L+MCL S+EK +LLKIW++VFC++A P+EYAE+LD LRS+Y LKQ
Sbjct: 421 KYIENLTKVPRFNMLVMCLTSTEKNELLKIWEDVFCNKATPMEYAEVLDKLRSRYCLKQ 476

BLAST of MC08g2192 vs. TAIR 10
Match: AT1G56440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 450.7 bits (1158), Expect = 1.5e-126
Identity = 265/495 (53.54%), Postives = 347/495 (70.10%), Query Frame = 0

Query: 7   MADSSGKHGRDSSLDFQGFLNDMQDWELSLKGKDKKLKPQAFGKEKEGRR--RAEKASAA 66
           MA S  KHGRD + DFQGF ND+QDWELSLK KDKK+K Q            R   +   
Sbjct: 1   MARSPSKHGRDQTQDFQGFFNDLQDWELSLKDKDKKIKQQPANSSNPSSETFRPSGSGKY 60

Query: 67  DYLKHYDAVNHLSRNFQTEQSFVDAASEKERGNEYFKQKKFKEAIDCYSRSIALSPTAVA 126
           D+ K Y ++  LS +   E S +D++SEKE+GNE+FKQKKF EAIDCYSRSIALSP AV 
Sbjct: 61  DFAKKYRSIRDLSSSLIGE-SLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPNAVT 120

Query: 127 FANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQR 186
           +ANRAMAYLKIKR++EAE DCTEALNLDDRYIKAYSRRATARKELG  KEA EDAEFA R
Sbjct: 121 YANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALR 180

Query: 187 LEPHNQEIKKQHAELRAFVGKSILEKASGASRSSSQD-------KEKVGKSDSEAKIQD- 246
           LEP +QE+KKQ+A++++ + K I+EKA+GA +S++Q+        +K+ K  +E   +  
Sbjct: 181 LEPESQELKKQYADIKSLLEKEIIEKATGAMQSTAQELLKTSGLDKKIQKPKTEMTSKPV 240

Query: 247 ----------VHPVSSSTLRTG---LQAAQEHIEENVRQK-AVKASTRLQD-TEDRSME- 306
                     V PV  S   +G   ++  Q     N R+  ++  S  LQ+ +++ SM+ 
Sbjct: 241 TLVAKTNRDIVQPVLGSNESSGKKLIENIQPEHRWNFRELISLYLSCYLQEKSKEGSMKI 300

Query: 307 ---AEIRYKREATNG---FHKDASPSLNLG---GLERNHVTRKQELKPSVQELASRAASR 366
               EI   ++ T G   + K+A PS   G       N V+++ ELKPSVQELA+ AAS 
Sbjct: 301 PAITEILDSKKVTPGSQSYEKEAKPSDRNGTQPSGPENQVSKQLELKPSVQELAAHAASL 360

Query: 367 SMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDI 426
           +M EA+KNI  P +AY+FE SWR FSGD AL+++LLK  +P+ LPQIFKNALT+P+L+DI
Sbjct: 361 AMTEASKNIKTPKSAYEFENSWRSFSGDSALRSQLLKVTTPSSLPQIFKNALTSPVLVDI 420

Query: 427 VKCVASFFTEEMALAINFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEY 467
           +KCVASFFTE+M LA+ ++ENLT+VPRF +L+MCL S+EK +LLKIW++VFC++A P+EY
Sbjct: 421 IKCVASFFTEDMDLAVKYIENLTKVPRFNMLVMCLTSTEKNELLKIWEDVFCNKATPMEY 480

BLAST of MC08g2192 vs. TAIR 10
Match: AT3G17970.1 (translocon at the outer membrane of chloroplasts 64-III )

HSP 1 Score: 93.6 bits (231), Expect = 4.5e-19
Identity = 52/111 (46.85%), Postives = 74/111 (66.67%), Query Frame = 0

Query: 93  KERGNEYFKQKKFKEAIDCYSRSIALSP-TAVAFANRAMAYLKIKRFQEAEDDCTEALNL 152
           KE+GN+ FK+K +++AI  YS +I LS   A  ++NRA AYL++  F +AE+DCT+A+ L
Sbjct: 478 KEKGNQAFKEKLWQKAIGLYSEAIKLSDNNATYYSNRAAAYLELGGFLQAEEDCTKAITL 537

Query: 153 DDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAF 203
           D + +KAY RR TAR+ LG  K A+ED  +A  LEP+N+        LR F
Sbjct: 538 DKKNVKAYLRRGTAREMLGDCKGAIEDFRYALVLEPNNKRASLSAERLRKF 588

BLAST of MC08g2192 vs. TAIR 10
Match: AT5G09420.1 (translocon at the outer membrane of chloroplasts 64-V )

HSP 1 Score: 81.3 bits (199), Expect = 2.3e-15
Identity = 46/112 (41.07%), Postives = 70/112 (62.50%), Query Frame = 0

Query: 93  KERGNEYFKQKKFKEAIDCYSRSIALS-PTAVAFANRAMAYLKIKRFQEAEDDCTEALNL 152
           KE+GN  +K K++ +A++ Y+ +I L+   A  + NRA A+L++  FQ+AE DCT+A+ +
Sbjct: 492 KEKGNAAYKGKQWNKAVNFYTEAIKLNGANATYYCNRAAAFLELCCFQQAEQDCTKAMLI 551

Query: 153 DDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFV 204
           D + +KAY RR TAR+ L + KEA  D   A  LEP N+  K     LR  +
Sbjct: 552 DKKNVKAYLRRGTARESLVRYKEAAADFRHALVLEPQNKTAKVAEKRLRKHI 603

BLAST of MC08g2192 vs. TAIR 10
Match: AT2G42810.1 (protein phosphatase 5.2 )

HSP 1 Score: 78.2 bits (191), Expect = 2.0e-14
Identity = 51/133 (38.35%), Postives = 77/133 (57.89%), Query Frame = 0

Query: 81  QTEQSFVDAASE-KERGNEYFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIKRF 140
           + E S V  A E K + NE FK  K+  AID Y+++I L S  AV +ANRA A+ K++ +
Sbjct: 4   KNENSDVSRAEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEY 63

Query: 141 QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAE 200
             A  D ++A+ +D RY K Y RR  A   +GK K+AL+D +  +RL P++ +  ++  E
Sbjct: 64  GSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKFKDALKDFQQVKRLSPNDPDATRKLKE 123

Query: 201 LRAFVGKSILEKA 212
               V K   E+A
Sbjct: 124 CEKAVMKLKFEEA 136

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q5ZKQ38.0e-2930.31RNA polymerase II-associated protein 3 OS=Gallus gallus OX=9031 GN=RPAP3 PE=2 SV... [more]
Q68FQ73.7e-2629.51RNA polymerase II-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Rpap3 PE... [more]
Q9D7061.9e-2530.65RNA polymerase II-associated protein 3 OS=Mus musculus OX=10090 GN=Rpap3 PE=1 SV... [more]
Q6NU952.7e-2428.53RNA polymerase II-associated protein 3 OS=Xenopus laevis OX=8355 GN=rpap3 PE=2 S... [more]
Q9H6T33.0e-2327.62RNA polymerase II-associated protein 3 OS=Homo sapiens OX=9606 GN=RPAP3 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
XP_022156426.10.0100.00RNA polymerase II-associated protein 3 [Momordica charantia][more]
XP_022965718.14.56e-27086.27RNA polymerase II-associated protein 3 isoform X1 [Cucurbita maxima][more]
XP_022937809.11.52e-26886.06RNA polymerase II-associated protein 3 isoform X1 [Cucurbita moschata][more]
XP_023538477.12.06e-26685.84RNA polymerase II-associated protein 3 isoform X1 [Cucurbita pepo subsp. pepo][more]
KAG7021040.16.69e-26686.34RNA polymerase II-associated protein 3, partial [Cucurbita argyrosperma subsp. a... [more]
Match NameE-valueIdentityDescription
A0A6J1DUX90.0100.00RNA polymerase II-associated protein 3 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1HPT12.21e-27086.27RNA polymerase II-associated protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1FCA07.36e-26986.06RNA polymerase II-associated protein 3 isoform X1 OS=Cucurbita moschata OX=3662 ... [more]
A0A1S3BWU01.36e-26083.69RNA polymerase II-associated protein 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A6J1HRS31.39e-25984.31RNA polymerase II-associated protein 3 isoform X2 OS=Cucurbita maxima OX=3661 GN... [more]
Match NameE-valueIdentityDescription
AT1G56440.11.0e-12754.70Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G56440.21.5e-12653.54Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G17970.14.5e-1946.85translocon at the outer membrane of chloroplasts 64-III [more]
AT5G09420.12.3e-1541.07translocon at the outer membrane of chloroplasts 64-V [more]
AT2G42810.12.0e-1438.35protein phosphatase 5.2 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..182
NoneNo IPR availableCOILSCoilCoilcoord: 257..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..234
NoneNo IPR availablePANTHERPTHR47329OS05G0129900 PROTEINcoord: 7..466
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 156..189
e-value: 0.15
score: 21.2
coord: 123..155
e-value: 0.028
score: 23.6
coord: 89..122
e-value: 2.8E-5
score: 33.6
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 124..152
e-value: 0.058
score: 13.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 89..122
score: 10.4434
IPR025986RNA-polymerase II-associated protein 3-like, C-terminal domainPFAMPF13877RPAP3_Ccoord: 342..431
e-value: 1.2E-24
score: 86.5
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 93..121
e-value: 4.8E-8
score: 32.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 73..187
e-value: 9.9E-36
score: 124.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 90..206

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g2192.1MC08g2192.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding