MC08g2125 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g2125
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 30196865 .. 30197131 (-)
RNA-Seq ExpressionMC08g2125
SyntenyMC08g2125
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTCCATCCAGTCCTTCCGATCAAGAACAAGAGCATCCTCCATTTCCCATCTCAAAGCAAGGAAGAGAAGGCTGAAGCATCACTCCTCCGCCGCCGCCACCACCACGCACAAGAGGCTCCGGGATCTCGAGAAGATCGTAATTCCCGGTCGCCGCCGCCACGAAACCGACCTCAACCACCTCTTCCAAAGAACTGCAGATCACATCTTCGCCTTGCAACTTAAGCTCAACATACTCAAGGATCTCACATCTCTCTATGGCCTC

mRNA sequence

ATGAGGTCCATCCAGTCCTTCCGATCAAGAACAAGAGCATCCTCCATTTCCCATCTCAAAGCAAGGAAGAGAAGGCTGAAGCATCACTCCTCCGCCGCCGCCACCACCACGCACAAGAGGCTCCGGGATCTCGAGAAGATCGTAATTCCCGGTCGCCGCCGCCACGAAACCGACCTCAACCACCTCTTCCAAAGAACTGCAGATCACATCTTCGCCTTGCAACTTAAGCTCAACATACTCAAGGATCTCACATCTCTCTATGGCCTC

Coding sequence (CDS)

ATGAGGTCCATCCAGTCCTTCCGATCAAGAACAAGAGCATCCTCCATTTCCCATCTCAAAGCAAGGAAGAGAAGGCTGAAGCATCACTCCTCCGCCGCCGCCACCACCACGCACAAGAGGCTCCGGGATCTCGAGAAGATCGTAATTCCCGGTCGCCGCCGCCACGAAACCGACCTCAACCACCTCTTCCAAAGAACTGCAGATCACATCTTCGCCTTGCAACTTAAGCTCAACATACTCAAGGATCTCACATCTCTCTATGGCCTC

Protein sequence

MRSIQSFRSRTRASSISHLKARKRRLKHHSSAAATTTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYGL
Homology
BLAST of MC08g2125 vs. NCBI nr
Match: KAE8651649.1 (hypothetical protein Csa_021260, partial [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 6.48e-21
Identity = 62/106 (58.49%), Postives = 76/106 (71.70%), Query Frame = 0

Query: 1   MRSIQSFRSRTRASSISHLK-ARKRRLK------HHSSAAATTT----------HKRLRD 60
           MRSI SFRSR +A++IS LK +R+RR+K      H SS+  + T          HKRLR+
Sbjct: 59  MRSIHSFRSRRQATTISKLKPSRRRRIKLLHLPKHTSSSTVSATTNRTTPSAAMHKRLRN 118

Query: 61  LEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYGL 89
           L+++V PG   HET+LNHLFQRTAD+I ALQLKLNILKDLTS YGL
Sbjct: 119 LQRLV-PGHT-HETNLNHLFQRTADYIHALQLKLNILKDLTSFYGL 162

BLAST of MC08g2125 vs. NCBI nr
Match: KAG6598843.1 (Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 88.2 bits (217), Expect = 2.35e-20
Identity = 63/107 (58.88%), Postives = 74/107 (69.16%), Query Frame = 0

Query: 1   MRSIQSFRSRTRASSISHLK-ARKRRLK-----------HHSSAAATTT------HKRLR 60
           MRSI SFR R +A+S ++LK  R+RRLK              SAAAT T      HKRLR
Sbjct: 1   MRSIHSFRQRRQATSTANLKPTRRRRLKLVHLPKNTTSSSAISAAATGTTPSPAMHKRLR 60

Query: 61  DLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYGL 89
           +L+++V PG   H+TDLNHLFQRTAD+I ALQLKLNILKDLTS YGL
Sbjct: 61  NLQRLV-PGHN-HDTDLNHLFQRTADYIQALQLKLNILKDLTSFYGL 105

BLAST of MC08g2125 vs. NCBI nr
Match: PON90720.1 (hypothetical protein TorRG33x02_135770 [Trema orientale])

HSP 1 Score: 60.1 bits (144), Expect = 1.94e-09
Identity = 32/59 (54.24%), Postives = 44/59 (74.58%), Query Frame = 0

Query: 30 SSAAATTTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYG 88
          S AA TTT K+LR L++I  PG +  E +L  LFQ+TA+HIF L+ KLN+LK L++L+G
Sbjct: 35 SEAAKTTTLKKLRKLQRITNPGYK--EMNLGTLFQKTANHIFVLEAKLNVLKSLSALFG 91

BLAST of MC08g2125 vs. NCBI nr
Match: PON56043.1 (hypothetical protein PanWU01x14_184020 [Parasponia andersonii])

HSP 1 Score: 59.7 bits (143), Expect = 2.95e-09
Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 0

Query: 30 SSAAATTTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYG 88
          S A  TTT K+LR L++I+ PG +  E +L  LFQ+TA+HIF L+ KLN+LK L++L+G
Sbjct: 38 SEAVKTTTLKKLRKLQRIINPGYK--EMNLGTLFQKTANHIFVLEAKLNVLKSLSALFG 94

BLAST of MC08g2125 vs. NCBI nr
Match: KAF3452864.1 (hypothetical protein FNV43_RR03297 [Rhamnella rubrinervis])

HSP 1 Score: 50.1 bits (118), Expect = 2.17e-05
Identity = 27/63 (42.86%), Postives = 44/63 (69.84%), Query Frame = 0

Query: 30  SSAAATTTHKRLRDLEKIVIPGR--RRHE--TDLNHLFQRTADHIFALQLKLNILKDLTS 88
           S++  T   K+L+ L++I+ P    +RHE   +L  LF++TA++IF L+ KLNILK L++
Sbjct: 43  STSTTTLLRKQLKQLQRIINPAADDQRHEEMNNLGSLFEKTANYIFLLEAKLNILKSLST 102

BLAST of MC08g2125 vs. ExPASy TrEMBL
Match: A0A0A0LJ57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047780 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.73e-22
Identity = 62/106 (58.49%), Postives = 76/106 (71.70%), Query Frame = 0

Query: 1   MRSIQSFRSRTRASSISHLK-ARKRRLK------HHSSAAATTT----------HKRLRD 60
           MRSI SFRSR +A++IS LK +R+RR+K      H SS+  + T          HKRLR+
Sbjct: 1   MRSIHSFRSRRQATTISKLKPSRRRRIKLLHLPKHTSSSTVSATTNRTTPSAAMHKRLRN 60

Query: 61  LEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYGL 89
           L+++V PG   HET+LNHLFQRTAD+I ALQLKLNILKDLTS YGL
Sbjct: 61  LQRLV-PGHT-HETNLNHLFQRTADYIHALQLKLNILKDLTSFYGL 104

BLAST of MC08g2125 vs. ExPASy TrEMBL
Match: A0A2P5EYW3 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_135770 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 9.40e-10
Identity = 32/59 (54.24%), Postives = 44/59 (74.58%), Query Frame = 0

Query: 30 SSAAATTTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYG 88
          S AA TTT K+LR L++I  PG +  E +L  LFQ+TA+HIF L+ KLN+LK L++L+G
Sbjct: 35 SEAAKTTTLKKLRKLQRITNPGYK--EMNLGTLFQKTANHIFVLEAKLNVLKSLSALFG 91

BLAST of MC08g2125 vs. ExPASy TrEMBL
Match: A0A2P5C4Q7 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_184020 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.43e-09
Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 0

Query: 30 SSAAATTTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYG 88
          S A  TTT K+LR L++I+ PG +  E +L  LFQ+TA+HIF L+ KLN+LK L++L+G
Sbjct: 38 SEAVKTTTLKKLRKLQRIINPGYK--EMNLGTLFQKTANHIFVLEAKLNVLKSLSALFG 94

BLAST of MC08g2125 vs. ExPASy TrEMBL
Match: A0A7N2L281 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.16e-07
Identity = 33/74 (44.59%), Postives = 53/74 (71.62%), Query Frame = 0

Query: 19 LKARKRRLK----HHSSAAATTTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQ 78
          ++ +K+RL+     +S+A  TT  ++LR L+KI IPG   +E DL  LF R A++I +LQ
Sbjct: 16 MRGKKKRLRLSLVKNSAAVNTTIQRKLRQLQKI-IPGC--NEMDLETLFPRIANYILSLQ 75

Query: 79 LKLNILKDLTSLYG 88
          +K+NILK++++LYG
Sbjct: 76 VKVNILKNISTLYG 86

BLAST of MC08g2125 vs. ExPASy TrEMBL
Match: B6TQT9 (Uncharacterized protein OS=Zea mays OX=4577 GN=100277208 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 4.77e-05
Identity = 23/50 (46.00%), Postives = 39/50 (78.00%), Query Frame = 0

Query: 39 KRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYG 88
          +RLR+L+KIV  G RR + D++ + +RTA++I AL+LK+ +L+ L+ +YG
Sbjct: 30 RRLRELKKIVPAGARRRKADVDVVLRRTAEYICALELKVALLRRLSHMYG 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAE8651649.16.48e-2158.49hypothetical protein Csa_021260, partial [Cucumis sativus][more]
KAG6598843.12.35e-2058.88Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia][more]
PON90720.11.94e-0954.24hypothetical protein TorRG33x02_135770 [Trema orientale][more]
PON56043.12.95e-0952.54hypothetical protein PanWU01x14_184020 [Parasponia andersonii][more]
KAF3452864.12.17e-0542.86hypothetical protein FNV43_RR03297 [Rhamnella rubrinervis][more]
Match NameE-valueIdentityDescription
A0A0A0LJ576.73e-2258.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047780 PE=4 SV=1[more]
A0A2P5EYW39.40e-1054.24Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_135770 PE=4 SV... [more]
A0A2P5C4Q71.43e-0952.54Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_184020 PE... [more]
A0A7N2L2816.16e-0744.59Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
B6TQT94.77e-0546.00Uncharacterized protein OS=Zea mays OX=4577 GN=100277208 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..35

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g2125.1MC08g2125.1mRNA