MC08g1956 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC08g1956
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC08: 27738821 .. 27738931 (+)
RNA-Seq ExpressionMC08g1956
SyntenyMC08g1956
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGAATCTATAGATACATTGGGTGGTATTTTGACTATGTGGGATGAAAATCAAGTTTGTATTTTAGAGGTGCTAAAAGGAGGATTTACTGTATCTATTAAAGCTTCACTT

mRNA sequence

GTTGAATCTATAGATACATTGGGTGGTATTTTGACTATGTGGGATGAAAATCAAGTTTGTATTTTAGAGGTGCTAAAAGGAGGATTTACTGTATCTATTAAAGCTTCACTT

Coding sequence (CDS)

GTTGAATCTATAGATACATTGGGTGGTATTTTGACTATGTGGGATGAAAATCAAGTTTGTATTTTAGAGGTGCTAAAAGGAGGATTTACTGTATCTATTAAAGCTTCACTT

Protein sequence

VESIDTLGGILTMWDENQVCILEVLKGGFTVSIKASL
Homology
[Close]
BLAST of MC08g1956 vs. NCBI nr
Match: KAA0045287.1 (uncharacterized protein E6C27_scaffold316G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 48.5 bits (114), Expect = 5.94e-05
Identity = 19/36 (52.78%), Postives = 28/36 (77.78%), Query Frame = 0 

Query: 1   VESIDTLGGILTMWDENQVCILEVLKGGFTVSIKAS 36
           +ESI   GGILTMWDE+++ + EV+KG F +S+K +
Sbjct: 87  IESIGRSGGILTMWDESEISVPEVIKGRFALSVKCT 122

[Close]
BLAST of MC08g1956 vs. NCBI nr
Match: TYJ98683.1 (hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 45.8 bits (107), Expect = 5.41e-04
Identity = 18/35 (51.43%), Postives = 27/35 (77.14%), Query Frame = 0 

Query: 1   VESIDTLGGILTMWDENQVCILEVLKGGFTVSIKA 35
           VES    GGILTMWD +++ ++E LKGG+++SI +
Sbjct: 101 VESFGRFGGILTMWDMSKIKVVETLKGGYSLSINS 135

[Close]
BLAST of MC08g1956 vs. ExPASy TrEMBL
Match: A0A5A7TTX5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00450 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 2.88e-05
Identity = 19/36 (52.78%), Postives = 28/36 (77.78%), Query Frame = 0 

Query: 1   VESIDTLGGILTMWDENQVCILEVLKGGFTVSIKAS 36
           +ESI   GGILTMWDE+++ + EV+KG F +S+K +
Sbjct: 87  IESIGRSGGILTMWDESEISVPEVIKGRFALSVKCT 122

[Close]
BLAST of MC08g1956 vs. ExPASy TrEMBL
Match: A0A5D3BHE3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00120 PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.62e-04
Identity = 18/35 (51.43%), Postives = 27/35 (77.14%), Query Frame = 0 

Query: 1   VESIDTLGGILTMWDENQVCILEVLKGGFTVSIKA 35
           VES    GGILTMWD +++ ++E LKGG+++SI +
Sbjct: 101 VESFGRFGGILTMWDMSKIKVVETLKGGYSLSINS 135

The following BLAST results are available for this feature:
BLAST of MC08g1956 vs.
Match NameE-valueIdentityDescription
BLAST of MC08g1956 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0045287.15.94e-0552.78uncharacterized protein E6C27_scaffold316G00450 [Cucumis melo var. makuwa][more]
TYJ98683.15.41e-0451.43hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa][more]
BLAST of MC08g1956 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TTX52.88e-0552.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BHE32.62e-0451.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MC08g1956 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC08g1956.1MC08g1956.1mRNA