MC08g1892 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1892
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribosome biogenesis protein WDR12 homolog
Location	MC08: 27143819 .. 27150691 (+)
RNA-Seq Expression	MC08g1892
Synteny	MC08g1892

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTAAGAAATTAAGTTTTTAGTTTTACATTACTTTTATCATGACAAATGTTTTTGGGCAAATGATGTTGGACGAAGAAATTCTTAATTCATGTCACGATGATCTATATGGAAGAGCAGTTTTGTTGATGCATTCCTGTTGAGAAGTTCAAAAATTTCGTCCATACCAACTTAGTCATCCTCTGGTTCGTGCACCAAAATCTTTCTAGTCTTCACGAGTTGGTCTCTCTTTTCTGATTTTGACCCTGTGGTCGAACTCCTCCAGGATCCGCTCTGTGGATTAGACCTTGACTGAAAGGAAAGGAGAAGGGACGAGTGACCTAAAGTATCGAAAAGGCAAGGACTCCAAGAAGAAGCCAAGCATGAGGCGTAGAAGGTTTATTCTTTCCCTAGATGCCCGATTTGTTTCCAATATGCACTTCCCTTCCATCCGACTACACTGAATTCCTTCTAAAAAAGTGTCTGACACCTGGTTTTCTCCGACACATATTAGCTTATCTGCGCTTAATAGGTCGGTTTGGCTTCCTCTCTGGCAGCCTAAAGTATAATTGTGTCAGTTGGATTTGATTTTTGTTTAACAAAAGAAATACCGAACCAATTTGAAAGAAGTTTGGTTAGACCTGAATTTTACATGCTATTTTTTTCTTTATTTATTCTTTTTAGTACAGGCTTTTTCTCTTATATATATATATATATATATATATTTTATTCATACTAGGTTTCTTTTTTATTTGTGAGAGGCTGCCAATTTCGAAAACCTATCTTCTTCTTCTTCTTTTTTCTCCCACGAAATCCTGCGAATCTTGCCCCGCCGTCGCCTTGCTGAGAGAACGTGAGAGGGTGGACAAGGAATGTATGCTATAAAACCCTTGGGTTTGTCGGGTCAACAACGGTTCGGTTTGATTTTTCGAGTCTGGTTCTGTGTTCAATTAACATATTCAATATATATCAAAATAAGTCTGTAATGAAAAAACAAATAAGACAACAGAGTGTAAGTGAGAGTTAAAACAAGAGAAAAATGAAAAAGTTCTATTCATTAAAACAGAGTTTTACAAATATTTTTTGAAAAATAAATAACAGATCATTGGCTCATTAATTAGACTACTAGTATTCAAATTCTCTCAAATTTACATCTACTCATCCAATACTTAATTAACTACCAATTATAAAATTAACCATTAATCATCGCTCCTAAAACGTAGATAAATAAACACCAACAATGAAACTACCATATATTTGTACTACTTTTTAACAATGTCAGGTATTTATTAGACACAAAAACTCAACAACTTTAAAATTTAGAAATTTATTAGATACTCGTTAAAATTTAAAAACTTATTAAACAGCATCCAAATGAAAGTTTAGAGACAAAACTTGTAATTTTTATATAGAAAAAAATAAAATAAAATGGTAGCATGAACAAAGCTCAATTGACGAGGTGGTCTGGAGTTTCAAATATTCATCTCGTTTACAACTTTTAAAAATACTGTAAATTACAAAACTGAACCGGGTTCGATCCGTCCGGTTTTTTATTATTTTTTATTTATTTATTTATTTTATTTTCCACAATAAAAATGAAAAACCCCAAGGCATTTGCGAAGGGTTTTTGGACGAAGTTCGTAGCATCTTCTCCTCTGCAGCTGAGGATTGTCATCTCAACGTTTCGTTATTCAGTTCTGGGATTCTTCAATTCACATAGGTAGATATGGACATCGACGGGGTTTCGGAGGACACCTCTCGGCGAGTTCAAGTGCGGTTTATCACGAAACTCAAGGCTCCTTTCAAGGTTCCGACGAACGCCATTGCCATTCCCTCTAACCTCACCAGACTGGGTCTTTCCACCGTTGTTAACAATCTTATTCTAGCCGGTATGTTCTTTTATCGCGTCTAAAATGTCGTCTGGTTATTTGCTGTTTCACTGGAACTATGTTTCGTTGCTCCGTATTGACTTGTTTTATTGAAACTAATGGATAGGGAACCCTGAGTGGGAAGCAGAACCATTTGATTTTCTAATTGATGGCGAGCTGGTCAGAATGTCGCTGGAGCAATTCCTTCTTGCTAAGGGAATCTCGGCGGTAATAGTTAAATTGTTGTTATCAATGTTTGGTTCCTATGTTGTGTGGAGAGGAAATCGGAAGCTTTTGAACGCTTACAATATATAGTTTATTTATTTAGAATATCTTCAGTTGAGTATCCAATATGACCCAAGTTAGAGATCTGGGAGGTTTTATTATTGTCTCTTTTTCTTTGAATTTTTAGTGTTCTTCCTGAACTGTCGTTTTGGCATACAATAGGAGAAAACGTTGGAGATTGAGTATATTAAGGCTGTTGCCCCACGAAAGGAGGAAGAGCCTTCTGTTCATGATGATTGGGTCAGTGCAGTAGATGGGTCTTGTCCTGGGTAAGCATTTGAATGCAACATCTACTTTATTATAGTCATCTATGATTCTATATCACCTGCATTTTGGGTTTTTTTTTTTTTAGTTTAGCGACCGTGCTTCAATTTATTGTCCCTGTGAGTTTTTTAAGATTTAGTGGTTGGTTGGTATCTTATGAATGCTTTTAGAATTTTCTTCCGTTCCTGTATGTTGAACTACTCTACTATTGGCTTGTCTTGGATGCCCTGTAAGGGTGTTTGGCTGTCTGTTACATAGAACACTTTGAATTGTTTTATTGTGCAATCTGATGACATGGTTTGGGTTACCATGTATTCGGGATCATTGTTACAAGCTCGTGATTCTTTTAAAGAACAATTTAAATTCTTTTAAATAGACCATCTGTCTAACAAAGTTAAATTTTAGAAACACAGTTATCAAAACATAGTGTTACATGTTTTGTCAATGAAAAGCAGTTTTAGGCTCAACTTTTAAAGTCTCTTTGTGGTCATTGAGTAATAACGGGTGTCAATTTTCTACCTCTGGGATTACCTTATCCCAAATATCAATGATAAAGATTGATACAATGAGGCATTTTATTTGTAAGCCAGTGTATTTTATTGCTGCATGTAGCAAGTTTCAGCGTGGTGTAATTTATTGAATGTGCATATTAGCTGTTACTGCTGTATAATCTTTTCAGTAGTAACAGCTAATATGCCTATTGCCTATCCATTAAACTGTTATTGCTGTATGCCTGTATCATTACAATTAGGATTTGAATTAGTTTGTAGGCATATCTTTTTAAATGAAGTAATTTAATTTTGCTTCTTCTGTTTGCATGTCAAAATAGCAAAGGAAACTAATATAATTTGAACTTGTGTTTGCTCATATTTTTCAGGTTCATTTTGACAGGTTGCTATGATGGCTTAGGAAGGTAAACTTAAGTTTTTTTTTTAATACTCGAAGAAACCCATAAACTGTTGTCTTTCTTACTATTTTTTCTTGAATAGTGAACACGGATTGTTATCTAAAAACATCTACTATTGTTCCATAGGGTTTGGGAATCTGCCGGATTGTGTACACATATACTTGAAGGTCATAGCGATGCCATATCATCCGTCTGTATTGTGAACCCTGAAGGTATTTACCAAACTTACCATCTCCTATAACACGATCCGTGAACAATGTTGTGCCAGTTGTTATAGTTGATAATTTTATTTTCTCTTTTCTATATCAAGCTTGTAGTTTTTTCTTGTGAGCTCCTGGTATTAGATTAATATATTTTGATATATTGGAAACTTTATATCACTTTCTGTTTGAGAAACTTGTCTACATGCTGAAGCACTTCAACGTTCCGAGGTAACCTTTAGCCCAAATTTTTTCTCTGAAAGTTGCCCTAGGAAATCCTTATATCTGGATTTCTACGTTCTCGTGCATGCATGCTGTTTACTATTAGATATACATATACTATAAAGTTTTTTTCCATTTTAGGAACGTTCAATCTTTGGGTTTAGGACCTTGTGGCCCTAAGCTATCTTTGACTTGCTAGCTAAATACTAGTCTTTGTCTAATTTATATTTATTGTTTTATTGAAACATGGTTCTCTAATTCAAGTTTGAATCTTATATCGATACTGGTTTATTTACTTCTTGACCATGCTAATACAGAAGCTGCTAGTGTCACTCTCGCCACTGCTTCAAAGGATCGAACACTCAGGCTGTGGAAGGTAATTTTTTGAAGAAGTACTTGTTTAATATTGGACCTATGTGATTGATGATTTAACAAAATAATTTTTCCTGTTTCCACTTGGAAGTATTCAAAAGACAAGTCTGCTAGCAACCCTACCAAGATAAGGGCATTCAAAATCTTGAAAGGACACGGATTATCTGTCCAAAGTGTTGCATCACAGACGTCTGGAGACCTGGTATGATTATGTTCTTGTTGCTGTGTTGTGTATATTATATGTTCCAATTCAAAGTGAAAGTTACAACGGTCTACTCACAAGTTTGCTCATATTATTTGATCTTTTATTATGTAATTTAGATCTGTTCAGGTTCTTGGGATTGCACAATCAATTTATGGCAAACAGATGAACCTCAATCTGAAGGTGATGTTGTCTCCATCAAGAGGAGAAAAAAGAATGACCAGGCTGAAGAATCTCAGTTAGAGGTAAAGCATAGTTTTTGTTCTTTTTGGTTAATTAGAGTTGACAACATGTCTTATCCAAAAAATTAGACTAGACAACATGTGACTATTTCAAGTGGGATCATGCATTATGGAAATGAACCTTTAACACAAGGAATGCCTCGACCCCCAGTTAACATTGGGGCCCATAAAAAATTAAAGAGGCTTGGAACGAATGAGTTCAAACCATGGTGATTGCCTATCTAAAATTTTCAATCTTACGAGTTTCTTTGGTAATCAAATATCGTAGGGTTCGGCGGTTGTTCGATGAGATTAGTCGAGTCATGCATGCAAGCTGGCATGGATGCTCACACACACACACATATAGGAATGCCTGAGCACCTGTTAAATATTAATTTTCAATTAGTTTGGTGTTTGGATGGTTAGAATGAATCGCTCCATGACCAGAATTCTCACTTTGCACCCTGCTTTTTATCTTTCTATGATATTATAATTTGAGCCTTGTTGCCTTTATCGGAGCTTTCTAAAAATTAACTCTTTCTGTTGTTACCAACCAATTCTTATGCTGCCTGGTGCGTGACTATTAATAGACATTTCTTTTTTTTGGATAGGAAACAAATTTCATATTGAGGGTTTTTAATTTTTGGTCATGAAATCTTAAACCGTTTCAACTTTCATAGCAACTCACTCTGTTCTCTATTCTCTCTCTTTGTCTTCTTCTTTTCTTTTAGTTACACATATATATAAGAAGGTTTCTTATCTTCTGCTTTTTGTTTCTTTCCCTTAATTTTTTCTCATATTTTTGTTTAATAATGTAGCTTATGTCTCTATATAAAACATCTAACAGGGCACCTCTGTTGCTACGCTTGTTGGCCACACACAATGTGTATCGTCAGTTGCTTGGCCGAAGCATGGAGAAATTTATTCAGCATCGTGGGACCATTCTGTAAGAAGATGGGATGTCGAGACAGGCAAAGATTTGTTTAATATTGTATGCTCGCCAACTCTTTCCATGTTCCTCTTCATGCATATGTTTATGAAATAGAATTTAATTTTGATGTTGAAGTTCTTGTTTTACATGACATGGACGTCCGTAGGAAGTTATGCATTCTCCATTTCCATGAAATTTTGTGTAAAATCCAACTTTTATGGAAATATAGCCCAGAAAGCATGTTCTCTTGAGGAAAGACATTAAACAGTTACTAACTTGTCAGTTTGTTTGCTTTTATGGAATGAAACTATTAGCAGTAGTAAAGGAAACTTGACAATTGAATGTTCTTTGGGATTAAATAGATATAAAATTACCTAAAGTTCCACACTTCTCTGAATTACTGTCTTATGTCTTCAAATTCATTCATCCAAATGAAATATGGATCCATTCATTAGAAAAATTGTCTCCATTGACAGTTTTGTGGTAAGGCACTCAGCTGCCTCGATATCGGAGGTGAGGGCTCCACTCTCATTGCTGCCGGTGGCTCAGACCCCACCATTAGAATATGGGATCCTCGTAAACCAGGTATACAGAACGGGAAATGGGCTGCATCCTCTAGAAACACTTCTGTATCTAATAATGTGATATTTTTGTAGGAACTTCTGGTCCAGTCTTTCAGTTCTTGTCCCATAGTTCTTGGGTTTCAGCTTGCAAGTGGCATGATAGATCTTGGTTCCATTTGCTGTCTGCATCATATGATGGGAAAGCTATGCTGTGGGATCTGAGAACTGCGGTACTCGAATATTCTCGCGCTCTATTGTTTGTTCTAATTTTGAATGTATAACACCTGACCAAAAAAATTGTTTTGTTCATCTTACAGTGGCCTTTAGCTGTAATTGACTCTCACAAAGACAAGGTACCCCATTTTGTTCCTTCCTCGCCAACATAGCCTTTGCCCTTTGGAACCTTGTTTCATTATGTTTGCAAATTTCAGGTACTGTCGGCTGACTGGTGGAAAGGTGACAATGTTATCAGTGGCGGGGTGGACTCGAGACTGTGCATTTCGTCTGGGATTTATGTGCCGTAAGGTAGAATAGAAAGATTTTCTTTTCTGGTAAAAAGGATTTTAGTTTACCACGAAATGACCACCTTAATTGACTATGAAATTATTATGGATGAGTTCGATTGCTGAAATCTCTTTAAATTTTCTTTTCAGGTCTGCTGCCTTTTCTTCAGTGTAAGGTAGAGAACTGTATCAGAGGAGAATATAAAAAGTAAATTGCGTTTCTTTTGTTGTAAAACCAATCAAATTTTCTCTCTTTGGAGAGAGCTCCCAACTATAGGCTGACTGAAACTTAAGAGTTGAGATTGGCTTATTATTTATAATTTATTCTTTTCTTTGAGTTCTCCCATAATACTCTC

mRNA sequence

GTTTTAAGAAATTAAGTTTTTAGTTTTACATTACTTTTATCATGACAAATGTTTTTGGGCAAATGATGTTGGACGAAGAAATTCTTAATTCATGTCACGATGATCTATATGGAAGAGCAGTTTTGTTGATGCATTCCTGTTGAGAAGTTCAAAAATTTCGTCCATACCAACTTAGTCATCCTCTGGTTCGTGCACCAAAATCTTTCTAGTCTTCACGAGTTGGTCTCTCTTTTCTGATTTTGACCCTGTGGTCGAACTCCTCCAGGATCCGCTCTGTGGATTAGACCTTGACTGAAAGGAAAGGAGAAGGGACGAGTGACCTAAAGTATCGAAAAGGCAAGGACTCCAAGAAGAAGCCAAGCATGAGGCGTAGAAGGTTTATTCTTTCCCTAGATGCCCGATTTGTTTCCAATATGCACTTCCCTTCCATCCGACTACACTGAATTCCTTCTAAAAAAGTGTCTGACACCTGGTTTTCTCCGACACATATTAGCTTATCTGCGCTTAATAGGTCGGTTTGGCTTCCTCTCTGGCAGCCTAAAGTATAATTGTGTCAGTTGGATTTGATTTTTGTTTAACAAAAGAAATACCGAACCAATTTGAAAGAAGTTTGGTTAGACCTGAATTTTACATGCTATTTTTTTCTTTATTTATTCTTTTTAGTACAGGCTTTTTCTCTTATATATATATATATATATATATATTTTATTCATACTAGGTTTCTTTTTTATTTGTGAGAGGCTGCCAATTTCGAAAACCTATCTTCTTCTTCTTCTTTTTTCTCCCACGAAATCCTGCGAATCTTGCCCCGCCGTCGCCTTGCTGAGAGAACGTGAGAGGGTGGACAAGGAATGCATTTGCGAAGGGTTTTTGGACGAAGTTCGTAGCATCTTCTCCTCTGCAGCTGAGGATTGTCATCTCAACGTTTCGTTATTCAGTTCTGGGATTCTTCAATTCACATAGGTAGATATGGACATCGACGGGGTTTCGGAGGACACCTCTCGGCGAGTTCAAGTGCGGTTTATCACGAAACTCAAGGCTCCTTTCAAGGTTCCGACGAACGCCATTGCCATTCCCTCTAACCTCACCAGACTGGGTCTTTCCACCGTTGTTAACAATCTTATTCTAGCCGGGAACCCTGAGTGGGAAGCAGAACCATTTGATTTTCTAATTGATGGCGAGCTGGTCAGAATGTCGCTGGAGCAATTCCTTCTTGCTAAGGGAATCTCGGCGGAGAAAACGTTGGAGATTGAGTATATTAAGGCTGTTGCCCCACGAAAGGAGGAAGAGCCTTCTGTTCATGATGATTGGGTCAGTGCAGTAGATGGGTCTTGTCCTGGGTTCATTTTGACAGGTTGCTATGATGGCTTAGGAAGGGTTTGGGAATCTGCCGGATTGTGTACACATATACTTGAAGGTCATAGCGATGCCATATCATCCGTCTGTATTGTGAACCCTGAAGAAGCTGCTAGTGTCACTCTCGCCACTGCTTCAAAGGATCGAACACTCAGGCTGTGGAAGTATTCAAAAGACAAGTCTGCTAGCAACCCTACCAAGATAAGGGCATTCAAAATCTTGAAAGGACACGGATTATCTGTCCAAAGTGTTGCATCACAGACGTCTGGAGACCTGATCTGTTCAGGTTCTTGGGATTGCACAATCAATTTATGGCAAACAGATGAACCTCAATCTGAAGGTGATGTTGTCTCCATCAAGAGGAGAAAAAAGAATGACCAGGCTGAAGAATCTCAGTTAGAGGGCACCTCTGTTGCTACGCTTGTTGGCCACACACAATGTGTATCGTCAGTTGCTTGGCCGAAGCATGGAGAAATTTATTCAGCATCGTGGGACCATTCTGTAAGAAGATGGGATGTCGAGACAGGCAAAGATTTGTTTAATATTGTATGCTCGCCAACTCTTTCCATCTGCCTCGATATCGGAGGTGAGGGCTCCACTCTCATTGCTGCCGGTGGCTCAGACCCCACCATTAGAATATGGGATCCTCGTAAACCAGGAACTTCTGGTCCAGTCTTTCAGTTCTTGTCCCATAGTTCTTGGGTTTCAGCTTGCAAGTGGCATGATAGATCTTGGTTCCATTTGCTGTCTGCATCATATGATGGGAAAGCTATGCTGTGGGATCTGAGAACTGCGTGGCCTTTAGCTGTAATTGACTCTCACAAAGACAAGGTACTGTCGGCTGACTGGTGGAAAGGTGACAATGTTATCAGTGGCGGGGTGGACTCGAGACTGTGCATTTCGTCTGGGATTTATGTGCCGTAAGGTCTGCTGCCTTTTCTTCAGTGTAAGGTAGAGAACTGTATCAGAGGAGAATATAAAAAGTAAATTGCGTTTCTTTTGTTGTAAAACCAATCAAATTTTCTCTCTTTGGAGAGAGCTCCCAACTATAGGCTGACTGAAACTTAAGAGTTGAGATTGGCTTATTATTTATAATTTATTCTTTTCTTTGAGTTCTCCCATAATACTCTC

Coding sequence (CDS)

ATGGACATCGACGGGGTTTCGGAGGACACCTCTCGGCGAGTTCAAGTGCGGTTTATCACGAAACTCAAGGCTCCTTTCAAGGTTCCGACGAACGCCATTGCCATTCCCTCTAACCTCACCAGACTGGGTCTTTCCACCGTTGTTAACAATCTTATTCTAGCCGGGAACCCTGAGTGGGAAGCAGAACCATTTGATTTTCTAATTGATGGCGAGCTGGTCAGAATGTCGCTGGAGCAATTCCTTCTTGCTAAGGGAATCTCGGCGGAGAAAACGTTGGAGATTGAGTATATTAAGGCTGTTGCCCCACGAAAGGAGGAAGAGCCTTCTGTTCATGATGATTGGGTCAGTGCAGTAGATGGGTCTTGTCCTGGGTTCATTTTGACAGGTTGCTATGATGGCTTAGGAAGGGTTTGGGAATCTGCCGGATTGTGTACACATATACTTGAAGGTCATAGCGATGCCATATCATCCGTCTGTATTGTGAACCCTGAAGAAGCTGCTAGTGTCACTCTCGCCACTGCTTCAAAGGATCGAACACTCAGGCTGTGGAAGTATTCAAAAGACAAGTCTGCTAGCAACCCTACCAAGATAAGGGCATTCAAAATCTTGAAAGGACACGGATTATCTGTCCAAAGTGTTGCATCACAGACGTCTGGAGACCTGATCTGTTCAGGTTCTTGGGATTGCACAATCAATTTATGGCAAACAGATGAACCTCAATCTGAAGGTGATGTTGTCTCCATCAAGAGGAGAAAAAAGAATGACCAGGCTGAAGAATCTCAGTTAGAGGGCACCTCTGTTGCTACGCTTGTTGGCCACACACAATGTGTATCGTCAGTTGCTTGGCCGAAGCATGGAGAAATTTATTCAGCATCGTGGGACCATTCTGTAAGAAGATGGGATGTCGAGACAGGCAAAGATTTGTTTAATATTGTATGCTCGCCAACTCTTTCCATCTGCCTCGATATCGGAGGTGAGGGCTCCACTCTCATTGCTGCCGGTGGCTCAGACCCCACCATTAGAATATGGGATCCTCGTAAACCAGGAACTTCTGGTCCAGTCTTTCAGTTCTTGTCCCATAGTTCTTGGGTTTCAGCTTGCAAGTGGCATGATAGATCTTGGTTCCATTTGCTGTCTGCATCATATGATGGGAAAGCTATGCTGTGGGATCTGAGAACTGCGTGGCCTTTAGCTGTAATTGACTCTCACAAAGACAAGGTACTGTCGGCTGACTGGTGGAAAGGTGACAATGTTATCAGTGGCGGGGTGGACTCGAGACTGTGCATTTCGTCTGGGATTTATGTGCCGTAA

Protein sequence

MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWEAEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDGSCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTLRLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQSEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHSSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISGGVDSRLCISSGIYVP

Homology

[Close]

BLAST of MC08g1892 vs. ExPASy Swiss-Prot
Match: Q9LF27 (Ribosome biogenesis protein WDR12 homolog OS=Arabidopsis thaliana OX=3702 GN=WDR12 PE=1 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 8.2e-193
Identity = 316/435 (72.64%), Postives = 374/435 (85.98%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDG  ED SRR+ V+F+TKL +PFKVP N++AIPSN+TRLGLS++VN++I + NPEW+
Sbjct: 1   MDIDG--EDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWK 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
            EPFDFLIDGEL+RMSLE+FLLAKGISAE+TLEIEYI+AV PRKEEEPS+HDDWVSAV+G
Sbjct: 61  TEPFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S P FILTGCYDGLGRVW SAG C+HILEGHS AISSV +VN  +A +VT+ATASKDRTL
Sbjct: 121 SSPRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RL+K+   +S  + TK+RA+KIL+GH  SVQSV++Q SG+++CS SWDCTINLW T+E  
Sbjct: 181 RLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNEST 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEG+ VS+K+RK N+QAEESQ EG +V +LVGHTQCVSSV WP+H  IYS+SWDHSVRRW
Sbjct: 241 SEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRW 300

Query: 301 DVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360
           DVETGKD  N+ C   L+  +D+GGE S LIAAGGSDP +R+WDPRKPGTS PVFQF SH
Sbjct: 301 DVETGKDSLNLFCGKALN-TVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSH 360

Query: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS 420
           SSW+SACKWH  SWFHLLSASYDGK MLWDLRTAWPL+VID+H DKVLSADWWKG++V+S
Sbjct: 361 SSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADWWKGESVVS 420

Query: 421 GGVDSRLCISSGIYV 436
           GG DS L ISSGI +
Sbjct: 421 GGADSNLRISSGIAI 432

[Close]

BLAST of MC08g1892 vs. ExPASy Swiss-Prot
Match: Q8H594 (Ribosome biogenesis protein WDR12 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=WDR12 PE=3 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 1.5e-165
Identity = 274/439 (62.41%), Postives = 347/439 (79.04%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MD  G S D SR+V+VRF+TKL AP + P  +IA+P++LTR+GLS +VN+L+LA +P+ +
Sbjct: 1   MDSGGAS-DPSRQVRVRFLTKLPAPLRAPPTSIAVPADLTRMGLSEIVNSLLLAASPDHQ 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           A+PFDFL+DGELVR+ L++FLLAKGIS E+ LE+EY+KAVAPRK+E+P  HDDWVSAVDG
Sbjct: 61  AQPFDFLVDGELVRLPLQEFLLAKGISVERVLELEYVKAVAPRKQEDPCPHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAAS-VTLATASKDRT 180
           S P F+LTGCYDGL R+W  A  CTHILEGHSD I+S   +N  E    + + TASKDR+
Sbjct: 121 SNPSFVLTGCYDGLARIWRDASECTHILEGHSDGITSARFINKGETEDRLHVVTASKDRS 180

Query: 181 LRLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEP 240
           LRL+K+  D S S P +I A+KIL+GH  SVQSVA   S ++ICSGSWD +I LW  +  
Sbjct: 181 LRLFKF--DTSVSVPKQIGAYKILRGHTSSVQSVAVDPSTNMICSGSWDNSIKLWSVEGS 240

Query: 241 QSEGDVVSIKRRKKNDQA---EESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHS 300
           + +GD VS+K+R+ N  +   EES  EG++ +T +GHTQCVS+V WP+   IYSASWDHS
Sbjct: 241 EEDGDTVSVKKRRTNSDSSGPEESLFEGSATSTFLGHTQCVSAVTWPERQTIYSASWDHS 300

Query: 301 VRRWDVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQ 360
           VR+WDV+TGK+ +N+V    L+ CLD GGE S+LIAAGGSDP +R+WDPRKPGT  P+FQ
Sbjct: 301 VRQWDVQTGKETWNMVSGKALN-CLDCGGESSSLIAAGGSDPVLRVWDPRKPGTLAPIFQ 360

Query: 361 FLSHSSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGD 420
           F SH SW+SACKWH  SWFHL+S+S+DGK MLWDLRTAWPLA ++SHKDKVL ADWWKGD
Sbjct: 361 FSSHKSWISACKWHPSSWFHLVSSSFDGKVMLWDLRTAWPLASVESHKDKVLCADWWKGD 420

Query: 421 NVISGGVDSRLCISSGIYV 436
           +VISGG DS+LCI+SGI +
Sbjct: 421 SVISGGADSKLCIASGIEI 435

[Close]

BLAST of MC08g1892 vs. ExPASy Swiss-Prot
Match: A8IR43 (Ribosome biogenesis protein WDR12 homolog OS=Chlamydomonas reinhardtii OX=3055 GN=CHLREDRAFT_128420 PE=3 SV=2)

HSP 1 Score: 289.3 bits (739), Expect = 7.4e-77
Identity = 169/453 (37.31%), Postives = 244/453 (53.86%), Query Frame = 0


Query: 6   VSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWEAEPFD 65
           ++E+T  +V V+F+TKL A  +VP   +A+PS+L R GLS ++N+L+    P     PFD
Sbjct: 1   MAEET--QVLVKFVTKLPAHLRVPETPVAVPSDLKRYGLSQIINHLLALDPP----RPFD 60

Query: 66  FLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDGS-C-- 125
           FLIDGELVR SLEQ LLA  +SAE TLE+EY+ AV P +++  + HDDWVS+VDGS C  
Sbjct: 61  FLIDGELVRKSLEQHLLAHNLSAESTLEVEYVPAVVPPQQKNSTPHDDWVSSVDGSRCAP 120

Query: 126 --------PGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATA 185
                    G +++G YDGL R+W         +  H+  ++  C+    ++    L T+
Sbjct: 121 ASSSGGSPSGVVVSGSYDGLLRLWNGDLEAVASVSAHAGGVN--CVRFLPKSQGDLLLTS 180

Query: 186 SKDRTLRLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLW 245
            KDR +++W+ S  +        R     +GH   V++VA+  SG    S  WD  + +W
Sbjct: 181 GKDRLVKMWQLSSSEEEDAGPSCRLVATYRGHEDGVEAVAASPSGRRFASCGWDGKLLVW 240

Query: 246 QTDEP--QSEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSAS 305
           +  E    + G   + K+++K   A  S   G   A L GH  CVSSVAWP    ++S  
Sbjct: 241 EGGEQLRWAAGTAEASKKKRKTGTANGSAAAGAGGADLRGHLHCVSSVAWPAENSLFSGG 300

Query: 306 WDHSVRRWDVETG--KDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPR-KPG 365
           WDHSVRRWDV +G   D +N        +C+        L+A G SD  +R+WD R K G
Sbjct: 301 WDHSVRRWDVSSGAAADTYN---GSKAVLCIASHAASPALVAFGCSDRALRLWDTRGKAG 360

Query: 366 TSG-PVFQFLSHSSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVL 425
           +    V    +H  WV+A  W   S  H+ SAS+DG   +WD+RT  PL ++  H DKVL
Sbjct: 361 SDALAVTTQGAHGGWVTAVAWCPSSQHHIASASHDGTIKMWDIRTQIPLGMLSHHTDKVL 420

Query: 426 SADWWKG------DNVISGGVDSRLCISSGIYV 436
           +  W  G        ++SGG D +L +    Y+
Sbjct: 421 ALGWLGGAEAGHARGLVSGGADCQLRMYESDYI 442

[Close]

BLAST of MC08g1892 vs. ExPASy Swiss-Prot
Match: Q6NX08 (Ribosome biogenesis protein wdr12 OS=Danio rerio OX=7955 GN=wdr12 PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 6.9e-67
Identity = 145/416 (34.86%), Postives = 225/416 (54.09%), Query Frame = 0


Query: 13  RVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWEAEPFDFLIDGEL 72
           ++Q RF T+ K  + V     +IP++     LS V+N L+ A N   +   FDFL+ G+ 
Sbjct: 3   QLQARFFTENK-KYLVDDVPFSIPASSEVADLSGVINKLLEAKNAGHKHVEFDFLVRGQF 62

Query: 73  VRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDGSCPGFILTGCYD 132
           +R SL++ +  + IS E+ +EIEY++     + EE  +HDDW+S+V+     +ILTG YD
Sbjct: 63  LRTSLDKHIETENISTEEVVEIEYVEKFTAPQPEECIMHDDWISSVEADSE-WILTGSYD 122

Query: 133 GLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTLRLWKYSKDKSAS 192
              R+W   G     + GH+D +  V  V  +   SV L TAS D+T+ LW+++ +++  
Sbjct: 123 KTARIWSMEGKAVMTVAGHADVVKDVAWVKRDGLNSV-LLTASLDQTVMLWEWNSERN-- 182

Query: 193 NPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQSEGDVVSIKRRK 252
              K++A    +GH  SV ++A   +    CSGSWD  + +W     + E ++    R +
Sbjct: 183 ---KVKARHCCRGHAGSVDTIAVDPTRTKFCSGSWDKMLKIWSAVPTEEEDEIEEPNRPR 242

Query: 253 KNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRWDVETGKDLFNIV 312
           K  + E+  L  T + TL GH + VSSV W    E+ SASWDH++R WD ETG     + 
Sbjct: 243 KKQKTEQMGLTRTPLMTLSGHNEAVSSVLWMDADELCSASWDHTIRLWDAETGGQKSTLS 302

Query: 313 CSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHSSWVSACKWHDR 372
            S   + C+        L A+G +D  +R+WDPR    S  +    SH+ WV+A +W   
Sbjct: 303 GSKVFN-CISYSPLCRRL-ASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPS 362

Query: 373 SWFHLLSASYDGKAMLWDLRTA-WPLAVIDSHKDKVLSADWWKGDNVISGGVDSRL 428
               L+S S D    LWD R+   PL  + +H+DKVL ADW +   ++SGG D++L
Sbjct: 363 HEHQLVSGSLDNVVKLWDTRSCKAPLYDLAAHEDKVLCADWTENGLILSGGADNKL 408

[Close]

BLAST of MC08g1892 vs. ExPASy Swiss-Prot
Match: Q5BJ90 (Ribosome biogenesis protein wdr12 OS=Xenopus tropicalis OX=8364 GN=wdr12 PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.0e-66
Identity = 149/418 (35.65%), Postives = 232/418 (55.50%), Query Frame = 0


Query: 13  RVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWEAEPFDFLIDGEL 72
           ++Q RF T+ +  +KV     +IP+    + LS ++N L+   N + +   FDFL+  + 
Sbjct: 3   QIQARFFTE-EEKYKVDDVPFSIPATSEIVDLSNLINKLLETKNGDHKPVEFDFLVKSQF 62

Query: 73  VRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDGSCPGFILTGCYD 132
           +RM L + + A+GIS E  +EIEY++ +   + EE  +HDDWVS++ G+   +ILTG YD
Sbjct: 63  LRMPLIKHMEAEGISTEVVVEIEYVEKITAPQPEECMMHDDWVSSIAGT-EEWILTGSYD 122

Query: 133 GLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTLRLWKYSKDKSAS 192
              R+W   G     + GH++A+  V  V  +++ S  L +AS D+T++LW+++ +++  
Sbjct: 123 KTCRIWSLEGKTIMTITGHTEAVKDVTWVK-KDSLSCLLLSASIDQTIQLWEWNTERN-- 182

Query: 193 NPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQT--DEPQSEGDVVSIKR 252
              KI+A    +GH  SV S+A   S    CSGSWD  + +W     E + E +  S + 
Sbjct: 183 ---KIKALHCCRGHAGSVDSIAVDASRTKFCSGSWDKMLKIWSAVPSEEEDEYEETSDRP 242

Query: 253 RKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRWDVETGKDLFN 312
           RKK  + E+  L    + TL GH++ VSSV W    EI SASWDH+++ WDVETG     
Sbjct: 243 RKK-QKTEKMGLTRIPIVTLSGHSEAVSSVLWSDVDEICSASWDHNIKIWDVETGTVKST 302

Query: 313 IVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHSSWVSACKWH 372
           +  +   + C+      S  +A+G +D  IR+WDPR    S  +    SH+ WV++ KW 
Sbjct: 303 LAGNKVFN-CISY-SPLSQRLASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWS 362

Query: 373 DRSWFHLLSASYDGKAMLWDLRTA-WPLAVIDSHKDKVLSADWWKGDNVISGGVDSRL 428
                 L+S S D    LWD R+   PL  + +H DKVLS DW     ++SGG D++L
Sbjct: 363 PSHEQQLVSGSLDKLVKLWDTRSCKAPLYDLAAHSDKVLSVDWTDAGLILSGGSDNKL 409

[Close]

BLAST of MC08g1892 vs. NCBI nr
Match: XP_022155078.1 (ribosome biogenesis protein WDR12 homolog [Momordica charantia])

HSP 1 Score: 879 bits (2272), Expect = 0.0
Identity = 431/436 (98.85%), Postives = 431/436 (98.85%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE
Sbjct: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ
Sbjct: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW
Sbjct: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300

Query: 301 DVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360
           DVETGKDLFNI C   LS CLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH
Sbjct: 301 DVETGKDLFNIFCGKALS-CLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360

Query: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS 420
           SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS
Sbjct: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS 420

Query: 421 GGVDSRLCISSGIYVP 436
           GGVDSRLCISSGIYVP
Sbjct: 421 GGVDSRLCISSGIYVP 435

[Close]

BLAST of MC08g1892 vs. NCBI nr
Match: XP_023523745.1 (ribosome biogenesis protein WDR12 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 784 bits (2025), Expect = 1.11e-284
Identity = 381/435 (87.59%), Postives = 402/435 (92.41%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDGVSED+SRR+QVRFITKLKAP +VPTNAIAIPSNLTRLGLSTVVNNL+LAGNPEWE
Sbjct: 1   MDIDGVSEDSSRRIQVRFITKLKAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGE VRMSLEQFLLAKGISAEK LEIEYIKAV PR+EEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S  GFILTGCYDGLGRVWESAGLCTHILEGH DAISSVC+VNPEEAASVTLATASKDRTL
Sbjct: 121 SHSGFILTGCYDGLGRVWESAGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD   SNPTKIR FKILKGH LSVQSVASQ SGDLICSGSWDCTINLWQTDE  
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGDV SIK+R+KNDQ EESQLEG SVATLVGHTQCVS+V WP+HGEIYSASWDHS+RRW
Sbjct: 241 SEGDV-SIKKRRKNDQVEESQLEGNSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360
           DVETGKDLFNI C   L+ CLD+GGEGSTLIAAGGSDPT+RIWDPRKPGTS P+FQFLSH
Sbjct: 301 DVETGKDLFNIFCGKALN-CLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSH 360

Query: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS 420
            SW+S+CKWHD+S FHLLSASYDGK  LWDLRTAWPLAVIDSHKDKVLSADWWKGD+V+S
Sbjct: 361 KSWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLSADWWKGDSVVS 420

Query: 421 GGVDSRLCISSGIYV 435
           GG DS+L IS GI V
Sbjct: 421 GGADSKLRISLGICV 433

[Close]

BLAST of MC08g1892 vs. NCBI nr
Match: XP_022948382.1 (ribosome biogenesis protein WDR12 homolog [Cucurbita moschata] >KAG7036791.1 Ribosome biogenesis protein WDR12-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 783 bits (2022), Expect = 3.17e-284
Identity = 380/435 (87.36%), Postives = 402/435 (92.41%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDGVSED+SRR+QVRFITKLKAP +VPTNAIAIPSNLTRLGLSTVVNNL+LAGNPEWE
Sbjct: 1   MDIDGVSEDSSRRIQVRFITKLKAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGE VRMSLEQFLLAKGISAEK LEIEYIKAV PR+EEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S  GFILTGCYDGLGRVWESAGLCTHILEGH DAISSVC+VNPEEAASVTLATASKDRTL
Sbjct: 121 SHSGFILTGCYDGLGRVWESAGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD   SNPTKIR FKILKGH LSVQSVASQ SGDLICSGSWDCTINLWQTDE  
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGDV SIK+R+KNDQ EESQLEG SVATLVGHTQCVS+V WP+HGEIYSASWDHS+RRW
Sbjct: 241 SEGDV-SIKKRRKNDQVEESQLEGNSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360
           DVETGKDLFNI C   L+ CLD+GGEGSTLIAAGGSDPT+RIWDPRKPGTS P+FQFLSH
Sbjct: 301 DVETGKDLFNIFCGKALN-CLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSH 360

Query: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS 420
            SW+S+CKWHD+S FHLLSASYDGK  LWDLRTAWPLAVIDSHKDKVL+ADWWKGD+V+S
Sbjct: 361 KSWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLAADWWKGDSVVS 420

Query: 421 GGVDSRLCISSGIYV 435
           GG DS+L IS GI V
Sbjct: 421 GGADSKLRISLGICV 433

[Close]

BLAST of MC08g1892 vs. NCBI nr
Match: XP_023525175.1 (ribosome biogenesis protein WDR12 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 780 bits (2015), Expect = 3.69e-283
Identity = 379/435 (87.13%), Postives = 401/435 (92.18%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDG SED+SRR+QVRFITKLKAP +VPTNAIAIPSNLTRLGLSTVVNNL+LAGNPEWE
Sbjct: 1   MDIDGGSEDSSRRIQVRFITKLKAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGE VRMSLEQFLLAKGISAEK LEIEYIKAV PR+EEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S  GFILTGCYDGLGRVWESAGLCTHILEGH DAISSVC+VNPEEAASVTLATASKDRTL
Sbjct: 121 SHSGFILTGCYDGLGRVWESAGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD   SNPTKIR FKILKGH LSVQSVASQ SGDLICSGSWDCTINLWQTDE  
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGDV SIK+R+KNDQ EESQLEG SVATLVGHTQCVS+V WP+HGEIYSASWDHS+RRW
Sbjct: 241 SEGDV-SIKKRRKNDQVEESQLEGNSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360
           DVETGKDLFNI C   L+ CLD+GGEGSTLIAAGGSDPT+RIWDPRKPGTS P+FQFLSH
Sbjct: 301 DVETGKDLFNIFCGKALN-CLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSH 360

Query: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS 420
            SW+S+CKWHD+S FHLLSASYDGK  LWDLRTAWPLAVIDSHKDKVL+ADWWKGD+V+S
Sbjct: 361 KSWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLAADWWKGDSVVS 420

Query: 421 GGVDSRLCISSGIYV 435
           GG DS+L IS GI V
Sbjct: 421 GGADSKLRISLGICV 433

[Close]

BLAST of MC08g1892 vs. NCBI nr
Match: XP_022997784.1 (ribosome biogenesis protein WDR12 homolog [Cucurbita maxima])

HSP 1 Score: 773 bits (1997), Expect = 2.04e-280
Identity = 375/435 (86.21%), Postives = 400/435 (91.95%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MD+DGVSED+SRR+QVRFITKL AP +VPTNAIAIPSNLTRLGLSTVVNNL+LAGNPEWE
Sbjct: 1   MDMDGVSEDSSRRIQVRFITKLMAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGE VRMSLEQFLLAKGISAEK LEIEYIKAV PR+EEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S  GFILTGCYDGLGRVWES+GLCTHILEGH DAISSVC+VNPEEAASVTLATASKD+TL
Sbjct: 121 SHSGFILTGCYDGLGRVWESSGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDQTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD   SNPTKIR FKILKGH LSVQSVASQ SGDLICSGSWDCTINLWQTDE  
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
            EG+V SIK+R+KNDQ EESQLEG SVATLVGHTQCVS+V WP+HGEIYSASWDHS+RRW
Sbjct: 241 FEGNV-SIKKRRKNDQVEESQLEGDSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360
           DVETGKDLFNI C   L+ CLD+GGEGSTLIAAGGSDPT+RIWDPRKPGTS P+FQFLSH
Sbjct: 301 DVETGKDLFNIFCGKALN-CLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSH 360

Query: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS 420
            SW+S+CKWHD+S FHLLSASYDGK  LWDLRTAWPLAVIDSHKDKVLSADWWKGD+V+S
Sbjct: 361 KSWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLSADWWKGDSVVS 420

Query: 421 GGVDSRLCISSGIYV 435
           GG DS+L IS GI V
Sbjct: 421 GGADSKLRISLGICV 433

[Close]

BLAST of MC08g1892 vs. ExPASy TrEMBL
Match: A0A6J1DM12 (Ribosome biogenesis protein WDR12 homolog OS=Momordica charantia OX=3673 GN=LOC111022210 PE=3 SV=1)

HSP 1 Score: 879 bits (2272), Expect = 0.0
Identity = 431/436 (98.85%), Postives = 431/436 (98.85%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE
Sbjct: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ
Sbjct: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW
Sbjct: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300

Query: 301 DVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360
           DVETGKDLFNI C   LS CLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH
Sbjct: 301 DVETGKDLFNIFCGKALS-CLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360

Query: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS 420
           SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS
Sbjct: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS 420

Query: 421 GGVDSRLCISSGIYVP 436
           GGVDSRLCISSGIYVP
Sbjct: 421 GGVDSRLCISSGIYVP 435

[Close]

BLAST of MC08g1892 vs. ExPASy TrEMBL
Match: A0A6J1G934 (Ribosome biogenesis protein WDR12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452076 PE=3 SV=1)

HSP 1 Score: 783 bits (2022), Expect = 1.53e-284
Identity = 380/435 (87.36%), Postives = 402/435 (92.41%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDGVSED+SRR+QVRFITKLKAP +VPTNAIAIPSNLTRLGLSTVVNNL+LAGNPEWE
Sbjct: 1   MDIDGVSEDSSRRIQVRFITKLKAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGE VRMSLEQFLLAKGISAEK LEIEYIKAV PR+EEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S  GFILTGCYDGLGRVWESAGLCTHILEGH DAISSVC+VNPEEAASVTLATASKDRTL
Sbjct: 121 SHSGFILTGCYDGLGRVWESAGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD   SNPTKIR FKILKGH LSVQSVASQ SGDLICSGSWDCTINLWQTDE  
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGDV SIK+R+KNDQ EESQLEG SVATLVGHTQCVS+V WP+HGEIYSASWDHS+RRW
Sbjct: 241 SEGDV-SIKKRRKNDQVEESQLEGNSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360
           DVETGKDLFNI C   L+ CLD+GGEGSTLIAAGGSDPT+RIWDPRKPGTS P+FQFLSH
Sbjct: 301 DVETGKDLFNIFCGKALN-CLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSH 360

Query: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS 420
            SW+S+CKWHD+S FHLLSASYDGK  LWDLRTAWPLAVIDSHKDKVL+ADWWKGD+V+S
Sbjct: 361 KSWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLAADWWKGDSVVS 420

Query: 421 GGVDSRLCISSGIYV 435
           GG DS+L IS GI V
Sbjct: 421 GGADSKLRISLGICV 433

[Close]

BLAST of MC08g1892 vs. ExPASy TrEMBL
Match: A0A6J1KCJ3 (Ribosome biogenesis protein WDR12 homolog OS=Cucurbita maxima OX=3661 GN=LOC111492637 PE=3 SV=1)

HSP 1 Score: 773 bits (1997), Expect = 9.88e-281
Identity = 375/435 (86.21%), Postives = 400/435 (91.95%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MD+DGVSED+SRR+QVRFITKL AP +VPTNAIAIPSNLTRLGLSTVVNNL+LAGNPEWE
Sbjct: 1   MDMDGVSEDSSRRIQVRFITKLMAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGE VRMSLEQFLLAKGISAEK LEIEYIKAV PR+EEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S  GFILTGCYDGLGRVWES+GLCTHILEGH DAISSVC+VNPEEAASVTLATASKD+TL
Sbjct: 121 SHSGFILTGCYDGLGRVWESSGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDQTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD   SNPTKIR FKILKGH LSVQSVASQ SGDLICSGSWDCTINLWQTDE  
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
            EG+V SIK+R+KNDQ EESQLEG SVATLVGHTQCVS+V WP+HGEIYSASWDHS+RRW
Sbjct: 241 FEGNV-SIKKRRKNDQVEESQLEGDSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360
           DVETGKDLFNI C   L+ CLD+GGEGSTLIAAGGSDPT+RIWDPRKPGTS P+FQFLSH
Sbjct: 301 DVETGKDLFNIFCGKALN-CLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSH 360

Query: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS 420
            SW+S+CKWHD+S FHLLSASYDGK  LWDLRTAWPLAVIDSHKDKVLSADWWKGD+V+S
Sbjct: 361 KSWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLSADWWKGDSVVS 420

Query: 421 GGVDSRLCISSGIYV 435
           GG DS+L IS GI V
Sbjct: 421 GGADSKLRISLGICV 433

[Close]

BLAST of MC08g1892 vs. ExPASy TrEMBL
Match: A0A1S3B4A1 (Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo OX=3656 GN=LOC103486017 PE=3 SV=1)

HSP 1 Score: 760 bits (1962), Expect = 2.12e-275
Identity = 374/435 (85.98%), Postives = 395/435 (90.80%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDG  EDTSRR+QVRFITKLKAPFKVP NAIAIPSNLTRLGLSTVVNNL+ AGNPEWE
Sbjct: 1   MDIDGDFEDTSRRIQVRFITKLKAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
            EPFDFLIDGELVRMSLE+FLLAKGISAEKTLEIEY KAVAPR+EEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNP EA +VTLATASKDRTL
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPGEATNVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD    NPTK+R FKILKGH LSVQSVASQ SG LICSGSWD TI LW+TDE Q
Sbjct: 181 RLWKYSKDDRVKNPTKLRPFKILKGHRLSVQSVASQKSGHLICSGSWDHTIKLWRTDEHQ 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGDV SIK+RK N++AEESQLE  SVATL GH+Q VSSVAWPKH EIYS SWDHSVR+W
Sbjct: 241 SEGDV-SIKKRKMNNKAEESQLEEDSVATLDGHSQSVSSVAWPKHEEIYSVSWDHSVRKW 300

Query: 301 DVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360
           DVETG  LFN VC   L+ CLDIGGEGS+LIAAGGSDPTIRIWDPRKPGTS P+FQF SH
Sbjct: 301 DVETGNVLFNHVCGKALN-CLDIGGEGSSLIAAGGSDPTIRIWDPRKPGTSSPIFQFSSH 360

Query: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS 420
           +SWVSACKWH++SWFHLLSASYDGK MLWDLRTAWPLAVIDSHKDKVLSADWWK D+V+S
Sbjct: 361 TSWVSACKWHEKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKDKVLSADWWKDDSVVS 420

Query: 421 GGVDSRLCISSGIYV 435
           GG DS+L ISSGIYV
Sbjct: 421 GGADSKLHISSGIYV 433

[Close]

BLAST of MC08g1892 vs. ExPASy TrEMBL
Match: A0A5D3C4N3 (Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00050 PE=3 SV=1)

HSP 1 Score: 760 bits (1962), Expect = 1.06e-274
Identity = 374/435 (85.98%), Postives = 395/435 (90.80%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDG  EDTSRR+QVRFITKLKAPFKVP NAIAIPSNLTRLGLSTVVNNL+ AGNPEWE
Sbjct: 1   MDIDGDFEDTSRRIQVRFITKLKAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
            EPFDFLIDGELVRMSLE+FLLAKGISAEKTLEIEY KAVAPR+EEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNP EA +VTLATASKDRTL
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPGEATNVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD    NPTK+R FKILKGH LSVQSVASQ SG LICSGSWD TI LW+TDE Q
Sbjct: 181 RLWKYSKDDRVKNPTKLRPFKILKGHRLSVQSVASQKSGHLICSGSWDHTIKLWRTDEHQ 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGDV SIK+RK N++AEESQLE  SVATL GH+Q VSSVAWPKH EIYS SWDHSVR+W
Sbjct: 241 SEGDV-SIKKRKMNNKAEESQLEEDSVATLDGHSQSVSSVAWPKHEEIYSVSWDHSVRKW 300

Query: 301 DVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360
           DVETG  LFN VC   L+ CLDIGGEGS+LIAAGGSDPTIRIWDPRKPGTS P+FQF SH
Sbjct: 301 DVETGNVLFNHVCGKALN-CLDIGGEGSSLIAAGGSDPTIRIWDPRKPGTSSPIFQFSSH 360

Query: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS 420
           +SWVSACKWH++SWFHLLSASYDGK MLWDLRTAWPLAVIDSHKDKVLSADWWK D+V+S
Sbjct: 361 TSWVSACKWHEKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKDKVLSADWWKDDSVVS 420

Query: 421 GGVDSRLCISSGIYV 435
           GG DS+L ISSGIYV
Sbjct: 421 GGADSKLHISSGIYV 433

[Close]

BLAST of MC08g1892 vs. TAIR 10
Match: AT5G15550.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 674.5 bits (1739), Expect = 5.8e-194
Identity = 316/435 (72.64%), Postives = 374/435 (85.98%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDG  ED SRR+ V+F+TKL +PFKVP N++AIPSN+TRLGLS++VN++I + NPEW+
Sbjct: 1   MDIDG--EDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWK 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
            EPFDFLIDGEL+RMSLE+FLLAKGISAE+TLEIEYI+AV PRKEEEPS+HDDWVSAV+G
Sbjct: 61  TEPFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S P FILTGCYDGLGRVW SAG C+HILEGHS AISSV +VN  +A +VT+ATASKDRTL
Sbjct: 121 SSPRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RL+K+   +S  + TK+RA+KIL+GH  SVQSV++Q SG+++CS SWDCTINLW T+E  
Sbjct: 181 RLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNEST 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEG+ VS+K+RK N+QAEESQ EG +V +LVGHTQCVSSV WP+H  IYS+SWDHSVRRW
Sbjct: 241 SEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRW 300

Query: 301 DVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360
           DVETGKD  N+ C   L+  +D+GGE S LIAAGGSDP +R+WDPRKPGTS PVFQF SH
Sbjct: 301 DVETGKDSLNLFCGKALN-TVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSH 360

Query: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVIS 420
           SSW+SACKWH  SWFHLLSASYDGK MLWDLRTAWPL+VID+H DKVLSADWWKG++V+S
Sbjct: 361 SSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADWWKGESVVS 420

Query: 421 GGVDSRLCISSGIYV 436
           GG DS L ISSGI +
Sbjct: 421 GGADSNLRISSGIAI 432

[Close]

BLAST of MC08g1892 vs. TAIR 10
Match: AT5G15550.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 607.1 bits (1564), Expect = 1.1e-173
Identity = 286/394 (72.59%), Postives = 338/394 (85.79%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDG  ED SRR+ V+F+TKL +PFKVP N++AIPSN+TRLGLS++VN++I + NPEW+
Sbjct: 1   MDIDG--EDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWK 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
            EPFDFLIDGEL+RMSLE+FLLAKGISAE+TLEIEYI+AV PRKEEEPS+HDDWVSAV+G
Sbjct: 61  TEPFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S P FILTGCYDGLGRVW SAG C+HILEGHS AISSV +VN  +A +VT+ATASKDRTL
Sbjct: 121 SSPRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RL+K+   +S  + TK+RA+KIL+GH  SVQSV++Q SG+++CS SWDCTINLW T+E  
Sbjct: 181 RLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNEST 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEG+ VS+K+RK N+QAEESQ EG +V +LVGHTQCVSSV WP+H  IYS+SWDHSVRRW
Sbjct: 241 SEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRW 300

Query: 301 DVETGKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSH 360
           DVETGKD  N+ C   L+  +D+GGE S LIAAGGSDP +R+WDPRKPGTS PVFQF SH
Sbjct: 301 DVETGKDSLNLFCGKALN-TVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSH 360

Query: 361 SSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTA 395
           SSW+SACKWH  SWFHLLSASYDGK MLWDLRTA
Sbjct: 361 SSWISACKWHKSSWFHLLSASYDGKIMLWDLRTA 391

[Close]

BLAST of MC08g1892 vs. TAIR 10
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-16
Identity = 67/241 (27.80%), Postives = 101/241 (41.91%), Query Frame = 0


Query: 202 ILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQSEGDVVSIKRRKKNDQAEESQ 261
           +L GH  +V ++    +G LI SGS D  I LW+       GD                 
Sbjct: 48  LLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRV-----HGDC---------------- 107

Query: 262 LEGTSVATLVGHTQCVSSVAWPKHG-EIYSASWDHSVRRWDVETGKDL--------FNIV 321
               +   L GH   +  + W   G +I SAS D +VR WDVETGK +        F   
Sbjct: 108 ---KNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNS 167

Query: 322 CSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHSSWVSACKWHDR 381
           C PT          G  LI +G  D T ++WD R+ G      Q       ++A  + D 
Sbjct: 168 CCPT--------RRGPPLIISGSDDGTAKLWDMRQRG----AIQTFPDKYQITAVSFSDA 227

Query: 382 SWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKV----LSADWWKGDNVISGGVDSRLC 430
           +   + +   D    +WDLR       ++ H+D +    LS D   G  +++ G+D++LC
Sbjct: 228 A-DKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPD---GSYLLTNGMDNKLC 248

[Close]

BLAST of MC08g1892 vs. TAIR 10
Match: AT3G18130.1 (receptor for activated C kinase 1C )

HSP 1 Score: 77.4 bits (189), Expect = 3.1e-14
Identity = 69/269 (25.65%), Postives = 121/269 (44.98%), Query Frame = 0


Query: 147 ILEGHSDAISSVCIVNPEEAASVTLATASKDRTLRLWKYSKDKSASNPTKIRAFKILKGH 206
           I+  H+D +++  I  P + + + + TAS+D+++ LWK +KD  +    + R    L GH
Sbjct: 10  IMRAHTDIVTA--IATPIDNSDI-IVTASRDKSIILWKLTKDDKSYGVAQRR----LTGH 69

Query: 207 GLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQS-------EGDVVSIKRRKKNDQAEE 266
              V+ V   + G    SGSWD  + LW     ++         DV+S+     N Q   
Sbjct: 70  SHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVS 129

Query: 267 SQLEGT------------SVATLVGHTQCVSSVAWPKH---GEIYSASWDHSVRRWDVET 326
           +  + T            +++   GH + VS V +  +     I SASWD +V+ W+++ 
Sbjct: 130 ASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 189

Query: 327 GKDLFNIVCSPTLSICLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHSSWV 386
            K   ++V        + +  +GS L A+GG D  I +WD  +      ++   + S   
Sbjct: 190 CKLRNSLVGHSGYLNTVAVSPDGS-LCASGGKDGVILLWDLAE---GKKLYSLEAGSIIH 249

Query: 387 SACKWHDRSWFHLLSASYDGKAMLWDLRT 394
           S C   +R W   L A+ +    +WDL +
Sbjct: 250 SLCFSPNRYW---LCAATENSIRIWDLES 264

[Close]

BLAST of MC08g1892 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 5.4e-14
Identity = 79/285 (27.72%), Postives = 117/285 (41.05%), Query Frame = 0


Query: 148 LEGHSDAISSVCIVNPEEAASVTLATASKDRTLRLWKYSKDKSASNPTKIRAFKILKGHG 207
           LEGH+ AIS V   N        LA+AS D+T+ LW      SA+N + I  +   +GH 
Sbjct: 39  LEGHTAAISCVKFSNDGN----LLASASVDKTMILW------SATNYSLIHRY---EGHS 98

Query: 208 LSVQSVASQTSGDLICSGSWDCTINLWQTDEPQSEGDVVSIKRRKKNDQAEESQLEGTSV 267
             +  +A  +     CS S DCT+ +W    P                           +
Sbjct: 99  SGISDLAWSSDSHYTCSASDDCTLRIWDARSPYE------------------------CL 158

Query: 268 ATLVGHTQCVSSVAW-PKHGEIYSASWDHSVRRWDVETGKDLFNIVCSPTLSICLDIGGE 327
             L GHT  V  V + P    I S S+D ++R W+V+TGK +  I         +    +
Sbjct: 159 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRD 218

Query: 328 GSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFL--SHSSWVSACKWHDRSWFHLLSASYDG 387
           GS LI +   D + +IWD ++    G   + L    S  VS  K+     F +L A+ D 
Sbjct: 219 GS-LIVSASHDGSCKIWDAKE----GTCLKTLIDDKSPAVSFAKFSPNGKF-ILVATLDS 278

Query: 388 KAMLWDLRTAWPLAVIDSHKDKVL----SADWWKGDNVISGGVDS 426
              L +  T   L V   H +KV     +     G  ++SG  D+
Sbjct: 279 TLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDN 280

The following BLAST results are available for this feature:

BLAST of MC08g1892 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF27	8.2e-193	72.64	Ribosome biogenesis protein WDR12 homolog OS=Arabidopsis thaliana OX=3702 GN=WDR...	[more]
Q8H594	1.5e-165	62.41	Ribosome biogenesis protein WDR12 homolog OS=Oryza sativa subsp. japonica OX=399...	[more]
A8IR43	7.4e-77	37.31	Ribosome biogenesis protein WDR12 homolog OS=Chlamydomonas reinhardtii OX=3055 G...	[more]
Q6NX08	6.9e-67	34.86	Ribosome biogenesis protein wdr12 OS=Danio rerio OX=7955 GN=wdr12 PE=2 SV=1	[more]
Q5BJ90	2.0e-66	35.65	Ribosome biogenesis protein wdr12 OS=Xenopus tropicalis OX=8364 GN=wdr12 PE=2 SV...	[more]

BLAST of MC08g1892 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155078.1	0.0	98.85	ribosome biogenesis protein WDR12 homolog [Momordica charantia]	[more]
XP_023523745.1	1.11e-284	87.59	ribosome biogenesis protein WDR12 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022948382.1	3.17e-284	87.36	ribosome biogenesis protein WDR12 homolog [Cucurbita moschata] >KAG7036791.1 Rib...	[more]
XP_023525175.1	3.69e-283	87.13	ribosome biogenesis protein WDR12 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022997784.1	2.04e-280	86.21	ribosome biogenesis protein WDR12 homolog [Cucurbita maxima]	[more]

BLAST of MC08g1892 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DM12	0.0	98.85	Ribosome biogenesis protein WDR12 homolog OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1G934	1.53e-284	87.36	Ribosome biogenesis protein WDR12 homolog OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KCJ3	9.88e-281	86.21	Ribosome biogenesis protein WDR12 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A1S3B4A1	2.12e-275	85.98	Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo OX=3656 GN=LOC10348601...	[more]
A0A5D3C4N3	1.06e-274	85.98	Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of MC08g1892 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15550.1	5.8e-194	72.64	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G15550.2	1.1e-173	72.59	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G43770.1	1.2e-16	27.80	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G18130.1	3.1e-14	25.65	receptor for activated C kinase 1C	[more]
AT4G02730.1	5.4e-14	27.72	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 331..345 score: 34.8 coord: 171..185 score: 36.58 coord: 377..391 score: 37.8
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 304..344 e-value: 2.3 score: 14.8 coord: 101..139 e-value: 2.0 score: 15.1 coord: 263..301 e-value: 3.1E-6 score: 36.7 coord: 393..431 e-value: 1.7 score: 15.5 coord: 141..184 e-value: 0.0011 score: 28.2 coord: 196..235 e-value: 2.3E-4 score: 30.5 coord: 350..390 e-value: 2.4E-5 score: 33.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 144..184 e-value: 8.4E-5 score: 23.3 coord: 320..344 e-value: 0.013 score: 16.4 coord: 266..301 e-value: 0.0017 score: 19.1 coord: 201..234 e-value: 9.1E-6 score: 26.3
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 330..344 score: 8.603614
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 203..244 score: 10.842632
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 357..399 score: 9.271977
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 270..310 score: 11.07656
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 148..193 score: 10.374778
IPR012972	NLE	PFAM	PF08154	NLE	coord: 14..81 e-value: 2.1E-18 score: 66.5
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 104..435 e-value: 1.3E-67 score: 230.0
None	No IPR available	PANTHER	PTHR19855:SF11	RIBOSOME BIOGENESIS PROTEIN WDR12	coord: 9..432
None	No IPR available	PANTHER	PTHR19855	WD40 REPEAT PROTEIN 12, 37	coord: 9..432
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 270..306 score: 8.676514
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 203..235 score: 9.019239
None	No IPR available	CDD	cd00200	WD40	coord: 111..427 e-value: 2.19723E-43 score: 152.104
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 377..391
IPR028599	WD repeat WDR12/Ytm1	HAMAP	MF_03029	WDR12	coord: 8..434 score: 30.236662
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 108..429

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1892.1	MC08g1892.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0005515	protein binding
molecular_function	GO:0043021	ribonucleoprotein complex binding