MC08g1785 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1785
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Bet_v_1 domain-containing protein
Location	MC08: 25919229 .. 25919344 (+)
RNA-Seq Expression	MC08g1785
Synteny	MC08g1785

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGTTAAATGGTCTTTAGAATTTGTGAAGCAAATGAAGAAGTTCCTCCACCACATGACCATGTACAAGTTGGAGTTAAAGTGTGCAAAAGTGTGGATGCTCTCCTTTGCAACAAT

mRNA sequence

TCAGTTAAATGGTCTTTAGAATTTGTGAAGAATGAAGAAGTTCCTCCACCACATGACCATGTACAAGTTGGAGTTAAAGTGTGCAAAAGTGTGGATGCTCTCCTTTGCAACAAT

Coding sequence (CDS)

TCAGTTAAATGGTCTTTAGAATTTGTGAAGAATGAAGAAGTTCCTCCACCACATGACCATGTACAAGTTGGAGTTAAAGTGTGCAAAAGTGTGGATGCTCTCCTTTGCAACAAT

Protein sequence

SVKWSLEFVKNEEVPPPHDHVQVGVKVCKSVDALLCNN

Homology

[Close]

BLAST of MC08g1785 vs. NCBI nr
Match: XP_022143420.1 (uncharacterized protein LOC111013301 [Momordica charantia])

HSP 1 Score: 77.8 bits (190), Expect = 1.22e-16
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 0


Query: 1   SVKWSLEFVK-NEEVPPPHDHVQVGVKVCKSVDALLCNN 38
           SVKWSLEFVK NEEVPPPHD++Q+GVKVCKSVDALLCNN
Sbjct: 116 SVKWSLEFVKANEEVPPPHDYLQLGVKVCKSVDALLCNN 154

[Close]

BLAST of MC08g1785 vs. NCBI nr
Match: KAA0056078.1 (major latex protein 15-like [Cucumis melo var. makuwa] >TYK01530.1 major latex protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 4.77e-10
Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 0


Query: 1   SVKWSLEFVK-NEEVPPPHDHVQVGVKVCKSVDALLCNN 38
           SV W +EFVK NE+V PPH+H++ G+KVCK +DA LCNN
Sbjct: 115 SVVWCVEFVKANEDVAPPHNHLKCGIKVCKDLDAYLCNN 153

[Close]

BLAST of MC08g1785 vs. NCBI nr
Match: XP_004149787.1 (kirola [Cucumis sativus] >KGN57830.1 hypothetical protein Csa_009961 [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 4.95e-10
Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 1   SVKWSLEFVK-NEEVPPPHDHVQVGVKVCKSVDALLCNN 38
           SVKW +EFVK NE+V PP++H++ G+KVCK +DA LCNN
Sbjct: 115 SVKWCVEFVKANEDVAPPNNHLKCGIKVCKDLDAYLCNN 153

[Close]

BLAST of MC08g1785 vs. NCBI nr
Match: XP_008465556.1 (PREDICTED: MLP-like protein 28 [Cucumis melo] >KAA0053134.1 MLP-like protein 28 [Cucumis melo var. makuwa] >TYK01540.1 MLP-like protein 28 [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 9.48e-10
Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 1   SVKWSLEFVK-NEEVPPPHDHVQVGVKVCKSVDALLCNN 38
           SV W LEFVK NE V PP+D++Q G K+CK VDA LCNN
Sbjct: 115 SVNWCLEFVKSNENVAPPNDYLQFGAKICKDVDAYLCNN 153

[Close]

BLAST of MC08g1785 vs. NCBI nr
Match: XP_004145832.1 (MLP-like protein 34 [Cucumis sativus])

HSP 1 Score: 57.8 bits (138), Expect = 7.43e-09
Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 1   SVKWSLEFVK-NEEVPPPHDHVQVGVKVCKSVDALLCNN 38
           SV W LEFVK NE V PP+D++Q GVK+CK VDA L NN
Sbjct: 115 SVNWCLEFVKSNENVAPPNDYLQFGVKICKDVDAYLSNN 153

[Close]

BLAST of MC08g1785 vs. ExPASy TrEMBL
Match: A0A6J1CNR9 (uncharacterized protein LOC111013301 OS=Momordica charantia OX=3673 GN=LOC111013301 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 5.90e-17
Identity = 35/39 (89.74%), Postives = 38/39 (97.44%), Query Frame = 0


Query: 1   SVKWSLEFVK-NEEVPPPHDHVQVGVKVCKSVDALLCNN 38
           SVKWSLEFVK NEEVPPPHD++Q+GVKVCKSVDALLCNN
Sbjct: 116 SVKWSLEFVKANEEVPPPHDYLQLGVKVCKSVDALLCNN 154

[Close]

BLAST of MC08g1785 vs. ExPASy TrEMBL
Match: A0A5A7ULW6 (Major latex protein 15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00920 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.31e-10
Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 0


Query: 1   SVKWSLEFVK-NEEVPPPHDHVQVGVKVCKSVDALLCNN 38
           SV W +EFVK NE+V PPH+H++ G+KVCK +DA LCNN
Sbjct: 115 SVVWCVEFVKANEDVAPPHNHLKCGIKVCKDLDAYLCNN 153

[Close]

BLAST of MC08g1785 vs. ExPASy TrEMBL
Match: A0A0A0L771 (Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G337350 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.40e-10
Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 1   SVKWSLEFVK-NEEVPPPHDHVQVGVKVCKSVDALLCNN 38
           SVKW +EFVK NE+V PP++H++ G+KVCK +DA LCNN
Sbjct: 115 SVKWCVEFVKANEDVAPPNNHLKCGIKVCKDLDAYLCNN 153

[Close]

BLAST of MC08g1785 vs. ExPASy TrEMBL
Match: A0A5A7UCZ9 (MLP-like protein 28 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001090 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.59e-10
Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 1   SVKWSLEFVK-NEEVPPPHDHVQVGVKVCKSVDALLCNN 38
           SV W LEFVK NE V PP+D++Q G K+CK VDA LCNN
Sbjct: 115 SVNWCLEFVKSNENVAPPNDYLQFGAKICKDVDAYLCNN 153

[Close]

BLAST of MC08g1785 vs. ExPASy TrEMBL
Match: A0A1S3CQL5 (MLP-like protein 28 OS=Cucumis melo OX=3656 GN=LOC103503185 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.59e-10
Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 1   SVKWSLEFVK-NEEVPPPHDHVQVGVKVCKSVDALLCNN 38
           SV W LEFVK NE V PP+D++Q G K+CK VDA LCNN
Sbjct: 115 SVNWCLEFVKSNENVAPPNDYLQFGAKICKDVDAYLCNN 153

The following BLAST results are available for this feature:

BLAST of MC08g1785 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g1785 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143420.1	1.22e-16	89.74	uncharacterized protein LOC111013301 [Momordica charantia]	[more]
KAA0056078.1	4.77e-10	64.10	major latex protein 15-like [Cucumis melo var. makuwa] >TYK01530.1 major latex p...	[more]
XP_004149787.1	4.95e-10	64.10	kirola [Cucumis sativus] >KGN57830.1 hypothetical protein Csa_009961 [Cucumis sa...	[more]
XP_008465556.1	9.48e-10	66.67	PREDICTED: MLP-like protein 28 [Cucumis melo] >KAA0053134.1 MLP-like protein 28 ...	[more]
XP_004145832.1	7.43e-09	66.67	MLP-like protein 34 [Cucumis sativus]	[more]

BLAST of MC08g1785 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNR9	5.90e-17	89.74	uncharacterized protein LOC111013301 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A5A7ULW6	2.31e-10	64.10	Major latex protein 15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0L771	2.40e-10	64.10	Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G337350 PE=...	[more]
A0A5A7UCZ9	4.59e-10	66.67	MLP-like protein 28 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G...	[more]
A0A1S3CQL5	4.59e-10	66.67	MLP-like protein 28 OS=Cucumis melo OX=3656 GN=LOC103503185 PE=3 SV=1	[more]

BLAST of MC08g1785 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 1..38 e-value: 3.0E-6 score: 29.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1785.1	MC08g1785.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response