MC08g1745 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1745
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	agamous-like MADS-box protein AGL14
Location	MC08: 25533331 .. 25533786 (+)
RNA-Seq Expression	MC08g1745
Synteny	MC08g1745

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAGAGGAAAATTGAGCCTGAAGCTGATTTCGTCTCACAAATCTCGCACTGCAACATTCCGCAAGAGAACCAAGAGTTTGATGAAGAAAGCCTTCGAGCTATCCACGCTCTGCGATGTCCGGACCTGCGTTTTGATCCATGGCCCTGCTCCTCCACAAGATGGTGATCGCTCGGTAGTGGAATCCCACACTTGGCCTCCCAATCGCGAAGAAATCGAAGGTATTATCCGGGCCTATAAGACTAATTATTTGCGGAAACCATCGATGAAGTCTTTTGGTTTGTATGATTTTTTCTCGGGTCGTATGAAGAAAATCGAAAAAGAGAGGGCTAAATTTAGTGAAGAAATCAAGTATGCGGGGTGGGACGAGCGGCTTAATTGTTTATCCGAACAGCAGCTGCGGTTGTTTATGGATAATTTGGGTTCGAAGATTGAAGCTGCAGAGGGAATGATT

mRNA sequence

ATGGGCAGAGGAAAATTGAGCCTGAAGCTGATTTCGTCTCACAAATCTCGCACTGCAACATTCCGCAAGAGAACCAAGAGTTTGATGAAGAAAGCCTTCGAGCTATCCACGCTCTGCGATGTCCGGACCTGCGTTTTGATCCATGGCCCTGCTCCTCCACAAGATGGTGATCGCTCGGTAGTGGAATCCCACACTTGGCCTCCCAATCGCGAAGAAATCGAAGGTATTATCCGGGCCTATAAGACTAATTATTTGCGGAAACCATCGATGAAGTCTTTTGGTTTGTATGATTTTTTCTCGGGTCGTATGAAGAAAATCGAAAAAGAGAGGGCTAAATTTAGTGAAGAAATCAAGTATGCGGGGTGGGACGAGCGGCTTAATTGTTTATCCGAACAGCAGCTGCGGTTGTTTATGGATAATTTGGGTTCGAAGATTGAAGCTGCAGAGGGAATGATT

Coding sequence (CDS)

ATGGGCAGAGGAAAATTGAGCCTGAAGCTGATTTCGTCTCACAAATCTCGCACTGCAACATTCCGCAAGAGAACCAAGAGTTTGATGAAGAAAGCCTTCGAGCTATCCACGCTCTGCGATGTCCGGACCTGCGTTTTGATCCATGGCCCTGCTCCTCCACAAGATGGTGATCGCTCGGTAGTGGAATCCCACACTTGGCCTCCCAATCGCGAAGAAATCGAAGGTATTATCCGGGCCTATAAGACTAATTATTTGCGGAAACCATCGATGAAGTCTTTTGGTTTGTATGATTTTTTCTCGGGTCGTATGAAGAAAATCGAAAAAGAGAGGGCTAAATTTAGTGAAGAAATCAAGTATGCGGGGTGGGACGAGCGGCTTAATTGTTTATCCGAACAGCAGCTGCGGTTGTTTATGGATAATTTGGGTTCGAAGATTGAAGCTGCAGAGGGAATGATT

Protein sequence

MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSGRMKKIEKERAKFSEEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAAEGMI

Homology

[Close]

BLAST of MC08g1745 vs. ExPASy Swiss-Prot
Match: Q9FIM0 (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-13
Identity = 50/147 (34.01%), Postives = 84/147 (57.14%), Query Frame = 0


Query: 6   LSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHT 65
           + L+ I++ K+R  T++KR  SL KKA E STLC V TC++++GP   +  D  + E   
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPT--KATDVVISEPEI 65

Query: 66  WPPNREEIEGIIRAYK----TNYLRKPSMKSFGLYDFFSGRMKKIEKERAKFSEEIKYAG 125
           WP +  ++  IIR YK    T+  ++ ++++F + D   G  + + K+R K   E KY+ 
Sbjct: 66  WPKDETKVRAIIRKYKDTVSTSCRKETNVETF-VNDVGKGN-EVVTKKRVK--RENKYSS 125

Query: 126 WDERLNCLSEQQLRLFMDNLGSKIEAA 149
           W+E+L+  S +QL      + SK+  A
Sbjct: 126 WEEKLDKCSREQLHGIFCAVDSKLNEA 146

[Close]

BLAST of MC08g1745 vs. ExPASy Swiss-Prot
Match: Q9FIX0 (Agamous-like MADS-box protein AGL81 OS=Arabidopsis thaliana OX=3702 GN=AGL81 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08
Identity = 39/118 (33.05%), Postives = 57/118 (48.31%), Query Frame = 0


Query: 12  SSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHTWPPNRE 71
           SS+   + +   R +++ KKA EL TLCD+  CV+ +GP    DG     E  TWPP RE
Sbjct: 19  SSYSLASTSLSNRLETIFKKASELCTLCDIEACVIYYGP----DG-----ELKTWPPERE 78

Query: 72  EIEGIIRAYKTNYLRKPSMKSFGLYDFFSGRMKKIEKERAKFSEEIKYAGWDERLNCL 130
           ++E I   Y          KS  LYDF + +     K++    ++ K    D+   CL
Sbjct: 79  KVEDIALRYSQLNEALRRKKSVTLYDFLNKK-----KDKTNLEKKAKITDNDDLKTCL 122

[Close]

BLAST of MC08g1745 vs. ExPASy Swiss-Prot
Match: Q9LSB2 (Agamous-like MADS-box protein AGL103 OS=Arabidopsis thaliana OX=3702 GN=AGL103 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 44/132 (33.33%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 16  SRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHTWPPNREEIEG 75
           SR  +  KR +++ KKA ELS LCD+  CV+ +G         S  E  TWP  RE+++ 
Sbjct: 31  SRATSLIKRQQTVFKKAKELSILCDIDVCVICYG---------SNGELKTWPEEREKVKA 90

Query: 76  IIRAYKTNYLRKPSMKSFGLYDFFSGRMK----KIEKERAKFSE--EIKYAGWDERLNCL 135
           I R Y      K    S  L++F     K    K EK++ K     ++KY  WD R +  
Sbjct: 91  IARRYGELSETKRRKGSVDLHEFLEKMNKDDPEKEEKKKIKVRRVPKVKYPVWDPRFDNY 150

Query: 136 SEQQLRLFMDNL 142
           S +QL   + +L
Sbjct: 151 SVEQLMGLVQSL 153

[Close]

BLAST of MC08g1745 vs. ExPASy Swiss-Prot
Match: Q9FJK3 (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.2e-07
Identity = 31/82 (37.80%), Postives = 43/82 (52.44%), Query Frame = 0


Query: 1  MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSV 60
          M R K+ L  IS+  SR ATF+KR K LMKK  ELSTLC +  C +I+ P          
Sbjct: 1  MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYD-------- 60

Query: 61 VESHTWPPNREEIEGIIRAYKT 83
               WP N   ++ ++  ++T
Sbjct: 61 TNPEVWPSN-SGVQRVVSEFRT 73

[Close]

BLAST of MC08g1745 vs. ExPASy Swiss-Prot
Match: Q40702 (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS2 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 5.9e-05
Identity = 42/148 (28.38%), Postives = 68/148 (45.95%), Query Frame = 0


Query: 1   MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSV 60
           MGRGK+ +K I +  +R  TF KR   ++KKA E+S LCD    V+I           S 
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFS---------SA 60

Query: 61  VESHTWPPNREEIEGIIRAYKTN---YLRKPSMKSFGLYDFFSGRMKKIEKERAKFSEEI 120
            + + +   +  +  I+  Y+TN    L     KS       S  + +I+KE      E+
Sbjct: 61  GKLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKS------LSAEIDRIKKENDNMQIEL 120

Query: 121 KYAGWDERLNCLSEQQLRLFMDNLGSKI 146
           ++    E LN L  ++L +  + L + I
Sbjct: 121 RHLK-GEDLNSLQPKELIMIEEALDNGI 132

[Close]

BLAST of MC08g1745 vs. NCBI nr
Match: XP_022143403.1 (uncharacterized protein LOC111013282 [Momordica charantia])

HSP 1 Score: 305 bits (782), Expect = 8.99e-102
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSV 60
           MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSV
Sbjct: 1   MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSV 60

Query: 61  VESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSGRMKKIEKERAKFSEEIKYA 120
           VESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSGRMKKIEKERAKFSEEIKYA
Sbjct: 61  VESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSGRMKKIEKERAKFSEEIKYA 120

Query: 121 GWDERLNCLSEQQLRLFMDNLGSKIEAAEGMI 152
           GWDERLNCLSEQQLRLFMDNLGSKIEAAEGMI
Sbjct: 121 GWDERLNCLSEQQLRLFMDNLGSKIEAAEGMI 152

[Close]

BLAST of MC08g1745 vs. NCBI nr
Match: XP_022143274.1 (uncharacterized protein LOC111013182 isoform X4 [Momordica charantia])

HSP 1 Score: 196 bits (499), Expect = 5.65e-60
Identity = 99/127 (77.95%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 29  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHTWPPNREEIEGIIRAYKTNYLRKP 88
           MKKAFELSTLCDVRTCVLIHGPAPPQDGD S VESHTWP NREEIEGIIRAYKT+Y +KP
Sbjct: 1   MKKAFELSTLCDVRTCVLIHGPAPPQDGDCSAVESHTWPLNREEIEGIIRAYKTSYFQKP 60

Query: 89  SMKSFGLYDFFSGRMKKIEKERAKF---SEEIKYAGWDERLNCLSEQQLRLFMDNLGSKI 148
            MKSF LY +FS RMKKIE ERAKF   +E+IK   WDERL CLS  QLRL M++LGSK 
Sbjct: 61  LMKSFDLYGYFSDRMKKIEAERAKFRNDAEDIKCPSWDERLECLSGHQLRLVMEDLGSKS 120

Query: 149 EAAEGMI 152
           E AEGMI
Sbjct: 121 EVAEGMI 127

[Close]

BLAST of MC08g1745 vs. NCBI nr
Match: XP_022143273.1 (uncharacterized protein LOC111013182 isoform X3 [Momordica charantia])

HSP 1 Score: 196 bits (499), Expect = 5.99e-60
Identity = 99/127 (77.95%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 29  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHTWPPNREEIEGIIRAYKTNYLRKP 88
           MKKAFELSTLCDVRTCVLIHGPAPPQDGD S VESHTWP NREEIEGIIRAYKT+Y +KP
Sbjct: 1   MKKAFELSTLCDVRTCVLIHGPAPPQDGDCSAVESHTWPLNREEIEGIIRAYKTSYFQKP 60

Query: 89  SMKSFGLYDFFSGRMKKIEKERAKF---SEEIKYAGWDERLNCLSEQQLRLFMDNLGSKI 148
            MKSF LY +FS RMKKIE ERAKF   +E+IK   WDERL CLS  QLRL M++LGSK 
Sbjct: 61  LMKSFDLYGYFSDRMKKIEAERAKFRNDAEDIKCPSWDERLECLSGHQLRLVMEDLGSKS 120

Query: 149 EAAEGMI 152
           E AEGMI
Sbjct: 121 EVAEGMI 127

[Close]

BLAST of MC08g1745 vs. NCBI nr
Match: XP_022143272.1 (uncharacterized protein LOC111013182 isoform X2 [Momordica charantia])

HSP 1 Score: 196 bits (499), Expect = 9.89e-60
Identity = 99/127 (77.95%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 29  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHTWPPNREEIEGIIRAYKTNYLRKP 88
           MKKAFELSTLCDVRTCVLIHGPAPPQDGD S VESHTWP NREEIEGIIRAYKT+Y +KP
Sbjct: 1   MKKAFELSTLCDVRTCVLIHGPAPPQDGDCSAVESHTWPLNREEIEGIIRAYKTSYFQKP 60

Query: 89  SMKSFGLYDFFSGRMKKIEKERAKF---SEEIKYAGWDERLNCLSEQQLRLFMDNLGSKI 148
            MKSF LY +FS RMKKIE ERAKF   +E+IK   WDERL CLS  QLRL M++LGSK 
Sbjct: 61  LMKSFDLYGYFSDRMKKIEAERAKFRNDAEDIKCPSWDERLECLSGHQLRLVMEDLGSKS 120

Query: 149 EAAEGMI 152
           E AEGMI
Sbjct: 121 EVAEGMI 127

[Close]

BLAST of MC08g1745 vs. NCBI nr
Match: XP_022143271.1 (uncharacterized protein LOC111013182 isoform X1 [Momordica charantia])

HSP 1 Score: 196 bits (499), Expect = 1.18e-59
Identity = 99/127 (77.95%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 29  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHTWPPNREEIEGIIRAYKTNYLRKP 88
           MKKAFELSTLCDVRTCVLIHGPAPPQDGD S VESHTWP NREEIEGIIRAYKT+Y +KP
Sbjct: 1   MKKAFELSTLCDVRTCVLIHGPAPPQDGDCSAVESHTWPLNREEIEGIIRAYKTSYFQKP 60

Query: 89  SMKSFGLYDFFSGRMKKIEKERAKF---SEEIKYAGWDERLNCLSEQQLRLFMDNLGSKI 148
            MKSF LY +FS RMKKIE ERAKF   +E+IK   WDERL CLS  QLRL M++LGSK 
Sbjct: 61  LMKSFDLYGYFSDRMKKIEAERAKFRNDAEDIKCPSWDERLECLSGHQLRLVMEDLGSKS 120

Query: 149 EAAEGMI 152
           E AEGMI
Sbjct: 121 EVAEGMI 127

[Close]

BLAST of MC08g1745 vs. ExPASy TrEMBL
Match: A0A6J1CQM2 (uncharacterized protein LOC111013282 OS=Momordica charantia OX=3673 GN=LOC111013282 PE=4 SV=1)

HSP 1 Score: 305 bits (782), Expect = 4.35e-102
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSV 60
           MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSV
Sbjct: 1   MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSV 60

Query: 61  VESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSGRMKKIEKERAKFSEEIKYA 120
           VESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSGRMKKIEKERAKFSEEIKYA
Sbjct: 61  VESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSGRMKKIEKERAKFSEEIKYA 120

Query: 121 GWDERLNCLSEQQLRLFMDNLGSKIEAAEGMI 152
           GWDERLNCLSEQQLRLFMDNLGSKIEAAEGMI
Sbjct: 121 GWDERLNCLSEQQLRLFMDNLGSKIEAAEGMI 152

[Close]

BLAST of MC08g1745 vs. ExPASy TrEMBL
Match: A0A6J1CNU9 (uncharacterized protein LOC111013182 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111013182 PE=4 SV=1)

HSP 1 Score: 196 bits (499), Expect = 2.73e-60
Identity = 99/127 (77.95%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 29  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHTWPPNREEIEGIIRAYKTNYLRKP 88
           MKKAFELSTLCDVRTCVLIHGPAPPQDGD S VESHTWP NREEIEGIIRAYKT+Y +KP
Sbjct: 1   MKKAFELSTLCDVRTCVLIHGPAPPQDGDCSAVESHTWPLNREEIEGIIRAYKTSYFQKP 60

Query: 89  SMKSFGLYDFFSGRMKKIEKERAKF---SEEIKYAGWDERLNCLSEQQLRLFMDNLGSKI 148
            MKSF LY +FS RMKKIE ERAKF   +E+IK   WDERL CLS  QLRL M++LGSK 
Sbjct: 61  LMKSFDLYGYFSDRMKKIEAERAKFRNDAEDIKCPSWDERLECLSGHQLRLVMEDLGSKS 120

Query: 149 EAAEGMI 152
           E AEGMI
Sbjct: 121 EVAEGMI 127

[Close]

BLAST of MC08g1745 vs. ExPASy TrEMBL
Match: A0A6J1CQB2 (uncharacterized protein LOC111013182 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111013182 PE=4 SV=1)

HSP 1 Score: 196 bits (499), Expect = 2.90e-60
Identity = 99/127 (77.95%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 29  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHTWPPNREEIEGIIRAYKTNYLRKP 88
           MKKAFELSTLCDVRTCVLIHGPAPPQDGD S VESHTWP NREEIEGIIRAYKT+Y +KP
Sbjct: 1   MKKAFELSTLCDVRTCVLIHGPAPPQDGDCSAVESHTWPLNREEIEGIIRAYKTSYFQKP 60

Query: 89  SMKSFGLYDFFSGRMKKIEKERAKF---SEEIKYAGWDERLNCLSEQQLRLFMDNLGSKI 148
            MKSF LY +FS RMKKIE ERAKF   +E+IK   WDERL CLS  QLRL M++LGSK 
Sbjct: 61  LMKSFDLYGYFSDRMKKIEAERAKFRNDAEDIKCPSWDERLECLSGHQLRLVMEDLGSKS 120

Query: 149 EAAEGMI 152
           E AEGMI
Sbjct: 121 EVAEGMI 127

[Close]

BLAST of MC08g1745 vs. ExPASy TrEMBL
Match: A0A6J1CQB5 (uncharacterized protein LOC111013182 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013182 PE=4 SV=1)

HSP 1 Score: 196 bits (499), Expect = 4.79e-60
Identity = 99/127 (77.95%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 29  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHTWPPNREEIEGIIRAYKTNYLRKP 88
           MKKAFELSTLCDVRTCVLIHGPAPPQDGD S VESHTWP NREEIEGIIRAYKT+Y +KP
Sbjct: 1   MKKAFELSTLCDVRTCVLIHGPAPPQDGDCSAVESHTWPLNREEIEGIIRAYKTSYFQKP 60

Query: 89  SMKSFGLYDFFSGRMKKIEKERAKF---SEEIKYAGWDERLNCLSEQQLRLFMDNLGSKI 148
            MKSF LY +FS RMKKIE ERAKF   +E+IK   WDERL CLS  QLRL M++LGSK 
Sbjct: 61  LMKSFDLYGYFSDRMKKIEAERAKFRNDAEDIKCPSWDERLECLSGHQLRLVMEDLGSKS 120

Query: 149 EAAEGMI 152
           E AEGMI
Sbjct: 121 EVAEGMI 127

[Close]

BLAST of MC08g1745 vs. ExPASy TrEMBL
Match: A0A6J1CPS5 (uncharacterized protein LOC111013182 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013182 PE=4 SV=1)

HSP 1 Score: 196 bits (499), Expect = 5.70e-60
Identity = 99/127 (77.95%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 29  MKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHTWPPNREEIEGIIRAYKTNYLRKP 88
           MKKAFELSTLCDVRTCVLIHGPAPPQDGD S VESHTWP NREEIEGIIRAYKT+Y +KP
Sbjct: 1   MKKAFELSTLCDVRTCVLIHGPAPPQDGDCSAVESHTWPLNREEIEGIIRAYKTSYFQKP 60

Query: 89  SMKSFGLYDFFSGRMKKIEKERAKF---SEEIKYAGWDERLNCLSEQQLRLFMDNLGSKI 148
            MKSF LY +FS RMKKIE ERAKF   +E+IK   WDERL CLS  QLRL M++LGSK 
Sbjct: 61  LMKSFDLYGYFSDRMKKIEAERAKFRNDAEDIKCPSWDERLECLSGHQLRLVMEDLGSKS 120

Query: 149 EAAEGMI 152
           E AEGMI
Sbjct: 121 EVAEGMI 127

[Close]

BLAST of MC08g1745 vs. TAIR 10
Match: AT5G58890.1 (AGAMOUS-like 82 )

HSP 1 Score: 77.8 bits (190), Expect = 8.4e-15
Identity = 50/147 (34.01%), Postives = 84/147 (57.14%), Query Frame = 0


Query: 6   LSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHT 65
           + L+ I++ K+R  T++KR  SL KKA E STLC V TC++++GP   +  D  + E   
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPT--KATDVVISEPEI 65

Query: 66  WPPNREEIEGIIRAYK----TNYLRKPSMKSFGLYDFFSGRMKKIEKERAKFSEEIKYAG 125
           WP +  ++  IIR YK    T+  ++ ++++F + D   G  + + K+R K   E KY+ 
Sbjct: 66  WPKDETKVRAIIRKYKDTVSTSCRKETNVETF-VNDVGKGN-EVVTKKRVK--RENKYSS 125

Query: 126 WDERLNCLSEQQLRLFMDNLGSKIEAA 149
           W+E+L+  S +QL      + SK+  A
Sbjct: 126 WEEKLDKCSREQLHGIFCAVDSKLNEA 146

[Close]

BLAST of MC08g1745 vs. TAIR 10
Match: AT5G55690.1 (MADS-box transcription factor family protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13
Identity = 46/148 (31.08%), Postives = 77/148 (52.03%), Query Frame = 0


Query: 1   MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSV 60
           MGR  + +  I++ K+R  T++KR   L KKA E STLC V TCV+++GP+  + GD  V
Sbjct: 1   MGRKMVKMTRITNEKTRITTYKKRKACLYKKASEFSTLCGVDTCVIVYGPS--RAGDEMV 60

Query: 61  VESHTWPPNREEIEGIIRAYKTNYLRKPSMKSFGLYDFFSGRMKKIEKERAKFSEEIKYA 120
           +E   WP +  ++  I+  Y+ +       K++ + +       K+EK     +   KY 
Sbjct: 61  MEPELWPKDGSKVREILTKYR-DTASSSCTKTYTVQECLEKNNTKVEKP----TIATKYP 120

Query: 121 GWDERLNCLSEQQLRLFMDNLGSKIEAA 149
            WD++L+  S   L      + +KI+ A
Sbjct: 121 TWDKKLDQCSLNDLYAVFMAVENKIQEA 141

[Close]

BLAST of MC08g1745 vs. TAIR 10
Match: AT5G39750.1 (AGAMOUS-like 81 )

HSP 1 Score: 61.2 bits (147), Expect = 8.1e-10
Identity = 39/118 (33.05%), Postives = 57/118 (48.31%), Query Frame = 0


Query: 12  SSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHTWPPNRE 71
           SS+   + +   R +++ KKA EL TLCD+  CV+ +GP    DG     E  TWPP RE
Sbjct: 19  SSYSLASTSLSNRLETIFKKASELCTLCDIEACVIYYGP----DG-----ELKTWPPERE 78

Query: 72  EIEGIIRAYKTNYLRKPSMKSFGLYDFFSGRMKKIEKERAKFSEEIKYAGWDERLNCL 130
           ++E I   Y          KS  LYDF + +     K++    ++ K    D+   CL
Sbjct: 79  KVEDIALRYSQLNEALRRKKSVTLYDFLNKK-----KDKTNLEKKAKITDNDDLKTCL 122

[Close]

BLAST of MC08g1745 vs. TAIR 10
Match: AT3G18650.1 (AGAMOUS-like 103 )

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 44/132 (33.33%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 16  SRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHTWPPNREEIEG 75
           SR  +  KR +++ KKA ELS LCD+  CV+ +G         S  E  TWP  RE+++ 
Sbjct: 31  SRATSLIKRQQTVFKKAKELSILCDIDVCVICYG---------SNGELKTWPEEREKVKA 90

Query: 76  IIRAYKTNYLRKPSMKSFGLYDFFSGRMK----KIEKERAKFSE--EIKYAGWDERLNCL 135
           I R Y      K    S  L++F     K    K EK++ K     ++KY  WD R +  
Sbjct: 91  IARRYGELSETKRRKGSVDLHEFLEKMNKDDPEKEEKKKIKVRRVPKVKYPVWDPRFDNY 150

Query: 136 SEQQLRLFMDNL 142
           S +QL   + +L
Sbjct: 151 SVEQLMGLVQSL 153

[Close]

BLAST of MC08g1745 vs. TAIR 10
Match: AT5G39810.1 (AGAMOUS-like 98 )

HSP 1 Score: 59.3 bits (142), Expect = 3.1e-09
Identity = 35/99 (35.35%), Postives = 50/99 (50.51%), Query Frame = 0


Query: 12  SSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGDRSVVESHTWPPNRE 71
           SS+   + +   R +++ +KA EL TLCD+  CV+ +GP    DG     E  TWPP RE
Sbjct: 19  SSYSLASTSLSNRLETIFRKASELCTLCDIEACVIYYGP----DG-----ELKTWPPERE 78

Query: 72  EIEGIIRAYKTNYLRKPSMKSFGLYDFFSGRMKKIEKER 111
           ++E I   Y          KS  LYDF + +  K   E+
Sbjct: 79  KVEDIALRYSQLNEALRRKKSVTLYDFLNKKKNKTNLEK 108

The following BLAST results are available for this feature:

BLAST of MC08g1745 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIM0	1.2e-13	34.01	Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=...	[more]
Q9FIX0	1.1e-08	33.05	Agamous-like MADS-box protein AGL81 OS=Arabidopsis thaliana OX=3702 GN=AGL81 PE=...	[more]
Q9LSB2	1.5e-08	33.33	Agamous-like MADS-box protein AGL103 OS=Arabidopsis thaliana OX=3702 GN=AGL103 P...	[more]
Q9FJK3	8.2e-07	37.80	Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=...	[more]
Q40702	5.9e-05	28.38	MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS...	[more]

BLAST of MC08g1745 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143403.1	8.99e-102	100.00	uncharacterized protein LOC111013282 [Momordica charantia]	[more]
XP_022143274.1	5.65e-60	77.95	uncharacterized protein LOC111013182 isoform X4 [Momordica charantia]	[more]
XP_022143273.1	5.99e-60	77.95	uncharacterized protein LOC111013182 isoform X3 [Momordica charantia]	[more]
XP_022143272.1	9.89e-60	77.95	uncharacterized protein LOC111013182 isoform X2 [Momordica charantia]	[more]
XP_022143271.1	1.18e-59	77.95	uncharacterized protein LOC111013182 isoform X1 [Momordica charantia]	[more]

BLAST of MC08g1745 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQM2	4.35e-102	100.00	uncharacterized protein LOC111013282 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1CNU9	2.73e-60	77.95	uncharacterized protein LOC111013182 isoform X4 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CQB2	2.90e-60	77.95	uncharacterized protein LOC111013182 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CQB5	4.79e-60	77.95	uncharacterized protein LOC111013182 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CPS5	5.70e-60	77.95	uncharacterized protein LOC111013182 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of MC08g1745 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58890.1	8.4e-15	34.01	AGAMOUS-like 82	[more]
AT5G55690.1	1.6e-13	31.08	MADS-box transcription factor family protein	[more]
AT5G39750.1	8.1e-10	33.05	AGAMOUS-like 81	[more]
AT3G18650.1	1.1e-09	33.33	AGAMOUS-like 103	[more]
AT5G39810.1	3.1e-09	35.35	AGAMOUS-like 98	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 61.18 coord: 3..23 score: 40.26
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..64 e-value: 2.2E-12 score: 57.1
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..50 e-value: 2.6E-14 score: 52.5
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..47 score: 17.072348
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 14..118 e-value: 2.9E-14 score: 54.9
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..102
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 3..151
None	No IPR available	PANTHER	PTHR11945:SF176	AGAMOUS-LIKE MADS-BOX PROTEIN AGL82	coord: 3..151
IPR033897	MADS SRF-like	CDD	cd00266	MADS_SRF_like	coord: 2..74 e-value: 1.35045E-18 score: 73.0631

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1745.1	MC08g1745.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0000987	cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding