MC08g1743 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1743
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC08: 25508141 .. 25508491 (+)
RNA-Seq Expression	MC08g1743
Synteny	MC08g1743

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATCAATAGCTGTGGTGTGATTAACAAGCACTTCTGCATTTGGGAAGAAAAGGATTGCTTTTTTGTTGAAGATATGTCCTTAAGAGCTGTATTGCCTATTCAGTTGCCCCACTTGGTATGGTTTGAGGAAGCTTTAGTGGATCCGTTGCAACTACCGATTCAATTGTCTTTTCTTAGACAAACTAGAACTCCAGGGGAAAATTGTCGAATCCAGAAGTTAGAATCACCATTTAGCTGTGAAGTGGGATGCACTGTTTGGCCTACCTCAAGTGGAAGAACGAGAATTTTCGTTCCCATAGGACATGGGCCCAGCATCAGAGGAAGATTTAGAAAATTCCAAAATTCC

mRNA sequence

ATGGAAATCAATAGCTGTGGTGTGATTAACAAGCACTTCTGCATTTGGGAAGAAAAGGATTGCTTTTTTGTTGAAGATATGTCCTTAAGAGCTGTATTGCCTATTCAGTTGCCCCACTTGGTATGGTTTGAGGAAGCTTTAGTGGATCCGTTGCAACTACCGATTCAATTGTCTTTTCTTAGACAAACTAGAACTCCAGGGGAAAATTGTCGAATCCAGAAGTTAGAATCACCATTTAGCTGTGAAGTGGGATGCACTGTTTGGCCTACCTCAAGTGGAAGAACGAGAATTTTCGTTCCCATAGGACATGGGCCCAGCATCAGAGGAAGATTTAGAAAATTCCAAAATTCC

Coding sequence (CDS)

ATGGAAATCAATAGCTGTGGTGTGATTAACAAGCACTTCTGCATTTGGGAAGAAAAGGATTGCTTTTTTGTTGAAGATATGTCCTTAAGAGCTGTATTGCCTATTCAGTTGCCCCACTTGGTATGGTTTGAGGAAGCTTTAGTGGATCCGTTGCAACTACCGATTCAATTGTCTTTTCTTAGACAAACTAGAACTCCAGGGGAAAATTGTCGAATCCAGAAGTTAGAATCACCATTTAGCTGTGAAGTGGGATGCACTGTTTGGCCTACCTCAAGTGGAAGAACGAGAATTTTCGTTCCCATAGGACATGGGCCCAGCATCAGAGGAAGATTTAGAAAATTCCAAAATTCC

Protein sequence

MEINSCGVINKHFCIWEEKDCFFVEDMSLRAVLPIQLPHLVWFEEALVDPLQLPIQLSFLRQTRTPGENCRIQKLESPFSCEVGCTVWPTSSGRTRIFVPIGHGPSIRGRFRKFQNS

Homology

[Close]

BLAST of MC08g1743 vs. NCBI nr
Match: TYJ98834.1 (putative 3,4-dihydroxy-2-butanone kinase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 1.91e-06
Identity = 26/93 (27.96%), Postives = 44/93 (47.31%), Query Frame = 0


Query: 1   MEINSCGVINKHFCIWEEKDCFFVEDMSLRAVLPIQLPHLVWFEEALVDPLQLPIQLSFL 60
           MEI  C +   H+CIW+E+D  F+ED+     +   +  L W +  + + L+  +  +F 
Sbjct: 217 MEIVGCKIDQSHYCIWKEEDSCFIEDVEACRSISTSISQLRWTKSVISNLLRTLVDNNFK 276

Query: 61  RQTRTPGENCRIQKLESPFSCEVGCTVWPTSSG 93
           +     G   RI K ++     + C  WP S G
Sbjct: 277 KFGDIDGGRLRISKFQAKSGWVLSCDHWPYSGG 309

[Close]

BLAST of MC08g1743 vs. NCBI nr
Match: KAA0036035.1 (putative 3,4-dihydroxy-2-butanone kinase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 2.00e-06
Identity = 26/93 (27.96%), Postives = 44/93 (47.31%), Query Frame = 0


Query: 1   MEINSCGVINKHFCIWEEKDCFFVEDMSLRAVLPIQLPHLVWFEEALVDPLQLPIQLSFL 60
           MEI  C +   H+CIW+E+D  F+ED+     +   +  L W +  + + L+  +  +F 
Sbjct: 43  MEIVGCKIDQSHYCIWKEEDSCFIEDVEACRSISTSISQLRWTKSVISNLLRTLVDNNFK 102

Query: 61  RQTRTPGENCRIQKLESPFSCEVGCTVWPTSSG 93
           +     G   RI K ++     + C  WP S G
Sbjct: 103 KFGDIDGGRLRISKFQAKSGWVLSCDHWPYSGG 135

[Close]

BLAST of MC08g1743 vs. NCBI nr
Match: KGN51638.2 (hypothetical protein Csa_008823 [Cucumis sativus])

HSP 1 Score: 49.3 bits (116), Expect = 1.24e-04
Identity = 26/94 (27.66%), Postives = 42/94 (44.68%), Query Frame = 0


Query: 1  MEINSCGVINKHFCIWEEKDCFFVEDMSLRAVLPIQLPHLVWFEEALVDPLQLPIQLSFL 60
          ME+ S  +++ HFC+W E D F VE +  +  + +   HL  F  A+   ++      FL
Sbjct: 1  MEVASSKILHTHFCVWLENDQFHVEGVDAQLSVVVSEAHLNGFLAAIAKLVRGSKDRFFL 60

Query: 61 RQTRTPGENCRIQKLESPFSCEVGCTVWPTSSGR 94
          +         ++ K  S     + C  WPTS  R
Sbjct: 61 KLGEFDRGRMKLSKFRSDIGWVLCCDFWPTSGHR 94

[Close]

BLAST of MC08g1743 vs. ExPASy TrEMBL
Match: A0A5D3BIE8 (Putative 3,4-dihydroxy-2-butanone kinase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00250 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 9.25e-07
Identity = 26/93 (27.96%), Postives = 44/93 (47.31%), Query Frame = 0


Query: 1   MEINSCGVINKHFCIWEEKDCFFVEDMSLRAVLPIQLPHLVWFEEALVDPLQLPIQLSFL 60
           MEI  C +   H+CIW+E+D  F+ED+     +   +  L W +  + + L+  +  +F 
Sbjct: 217 MEIVGCKIDQSHYCIWKEEDSCFIEDVEACRSISTSISQLRWTKSVISNLLRTLVDNNFK 276

Query: 61  RQTRTPGENCRIQKLESPFSCEVGCTVWPTSSG 93
           +     G   RI K ++     + C  WP S G
Sbjct: 277 KFGDIDGGRLRISKFQAKSGWVLSCDHWPYSGG 309

[Close]

BLAST of MC08g1743 vs. ExPASy TrEMBL
Match: A0A5A7T3H6 (Putative 3,4-dihydroxy-2-butanone kinase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00260 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 9.66e-07
Identity = 26/93 (27.96%), Postives = 44/93 (47.31%), Query Frame = 0


Query: 1   MEINSCGVINKHFCIWEEKDCFFVEDMSLRAVLPIQLPHLVWFEEALVDPLQLPIQLSFL 60
           MEI  C +   H+CIW+E+D  F+ED+     +   +  L W +  + + L+  +  +F 
Sbjct: 43  MEIVGCKIDQSHYCIWKEEDSCFIEDVEACRSISTSISQLRWTKSVISNLLRTLVDNNFK 102

Query: 61  RQTRTPGENCRIQKLESPFSCEVGCTVWPTSSG 93
           +     G   RI K ++     + C  WP S G
Sbjct: 103 KFGDIDGGRLRISKFQAKSGWVLSCDHWPYSGG 135

[Close]

BLAST of MC08g1743 vs. ExPASy TrEMBL
Match: A0A5A7VAE9 (ABC transporter C family member 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G001360 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.87e-04
Identity = 23/54 (42.59%), Postives = 32/54 (59.26%), Query Frame = 0


Query: 1  MEINSCGVINKHFCIWEEKDCFFVEDMSLRAVLPIQLPHLVWFEEALVDPLQLP 54
          ME+ SC V   H+ IW+E D F VED+    +L +    LVWF EA++  L+ P
Sbjct: 1  MEMVSCKVYQSHYSIWQEGDRFHVEDVEAHRILAVSEFQLVWFCEAVLKLLRGP 54

The following BLAST results are available for this feature:

BLAST of MC08g1743 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g1743 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98834.1	1.91e-06	27.96	putative 3,4-dihydroxy-2-butanone kinase isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0036035.1	2.00e-06	27.96	putative 3,4-dihydroxy-2-butanone kinase isoform X2 [Cucumis melo var. makuwa]	[more]
KGN51638.2	1.24e-04	27.66	hypothetical protein Csa_008823 [Cucumis sativus]	[more]

BLAST of MC08g1743 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BIE8	9.25e-07	27.96	Putative 3,4-dihydroxy-2-butanone kinase isoform X1 OS=Cucumis melo var. makuwa ...	[more]
A0A5A7T3H6	9.66e-07	27.96	Putative 3,4-dihydroxy-2-butanone kinase isoform X2 OS=Cucumis melo var. makuwa ...	[more]
A0A5A7VAE9	4.87e-04	42.59	ABC transporter C family member 2-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of MC08g1743 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1743.1	MC08g1743.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process